Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_04G0511300 | OGI:04027510 | 4/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr04:33931656-33937286 | ||||||||
| Gene Symbol | SDK8 | ||||||||||
| DNA seq | CCCCAAGAGACTTTCCTTCTTTTTTTTTTTTTTGTAAACCATTGAAAATGAACCATACACCCACAAAGCAATCATATTCCTAGGTTCTTGCACAATTGATCAAGTGGTGAATTCTACAGCCAGCTAAATCTGAAATTAACCATTTAACGTCCTTGTAGTGTGGTAAGACTTATACTGTTCACAGACTTGTTGGCATCCTCTCTTGCCCCTCCTGCCATGCAATTCCTTGGCACAAAATATGCAGGTTGCTTAGGAGTAGGAAGTGTTGTGGCTTCATTCTCGAGCATGGCCACAACTGATGACATGAGTGGTCTAGCATTTGGGTCTTCCTGAACGCATAACAGTCCTACATGGATACAGAGCAAAAACTCATTAAGTGAATATATCTGCAGAATAATTGAGTCCACGAGATCCTCTGCCTTTCCATTCTTCCACAAGCTCCATGCCTGAACCAAGGGAACAAAGTTCCTAATTAGTGCAAAATCCTAGCTATTGAAACTTTATGCATTTTGATATTTCTTAGAACTTACACACTTACACAGGCTATAAGATTTGGAAAACCCATTATAAGATGAGGAGAGCTTATCTTAGAGCCGCTTATAAGTTCCAAAACTAAAACACCAAAGCTGTAGGTGTCAGACTTGACAGAGAAGATGCCTTCCATTGCATATCAGGAGACATGTAACCACTATATGAATCATGTCACCAACGAGTGTAAGTTATTTAAGTGTTTTCCAAGTATATAAAAGTTAGTATTGTAATCATAAGTAGTGCAATAGTTACTCACTATGTCCCGACTACATGTCTAGTGTTTGCTTGATGCTGGTTGCCACCAAAGATCCTTGTCATGCCAAAATCTGATATTTTGGGGCTCATCCCCTCATCCAATAAAATGTTGCTCGCTTTGAGATCTCTGTGAATTATTGTCATCCTCGAATCTTGGTGGAGATAAACAAGTCCTCTAGCTACTCCTTTGATTATGTTGAACCGTGTTTGCCAGTCAAGCATAGACTTTTTTGAATCATCTACCGTGAACAATATAAAACGATACTTATAGTTGTTCACACATGGCCTTTTGGTAACAGTCTTCCACCAAACGTGGAAAAAGAAAAGGTAAAAAAGGAATATATGATTAGGACATACCAAAAAGGAAGTAATCCAAGCTTTTGTTGGGCAAGTATTCATATATGAGAAGCTTTTCCTCTCCGTGAATGCAGCAACCAAGAAGCCTGACTAGATTTTTGTGCTGCAATTTGGCAATAAGGACCACTTCATTTCTGAACTCTTCTACTCCTTGTCCAGAATGCTTGCTAAGCCTTTTAATGGCCACTTCTTTGTTACCGCCTAGCATGCCCTGCACAATTTAATCACTTTAATTTTTATTAAGAAAGTTCATCGGGATATACACTTGTTCACACAGTATCATGGATGTATGGTTTCACCCCTGAGGTTCTATGGGCTGTTTTGGATTAGTGCCAAAAACGTGCCCTACCAATACTTTGGTAGTTTGAACAGTGTATCTGGTGATTTTGGTTTGAAGCCAAATCATTGGCATTGCCAATGCCCAATTTGATATTTTCTATATTCTACTCAATGCTTGGTTCTAAATTGGCCTCAAACCAAATACAACTCTACCCTACCAAAAAATTGGTAGTACCAAAACTTGCCTAGGTTTTGGCACTACCAACATTTTGGTAGGGTATTGAACCAAACAAGCCCTATATTTGATTCTTAACACAATCATACATTCTTCTCAATTATTTAACACCAAGTTTGTTGGAACAAAATCCAATAAGCATGGCAAGGGCTTCCCTCCAATGGGAGGGAGGCCAAGCTTGATCCTGTGAGGAGATGAGAGGAAGAGGATGAAGGATGAGAGCCCTTTCCTCGAATGGTTCCTGTGTCATCTAGTTCAATTCTGCCAGAACAAATCCGGCCCGCTAATGCCCACCAGGCCGCCAAGCCCATGTTGACAAGAACCCGATTTCAAGTCGAGATCAATGGGTTACGGGTGTGTCTTCTTAACTCGTTTCCGGTGCGATGGCTCAAAGTTTGGGTACCGAGGAACAAAATCGATGGTAAATAATCAATTTTATCATCACAAAAAATGCAATTGTATGCCACATATGTTACGGTCCTACTCCTCTCCAAATATCAATTATACATGTTTCACCATGTGCTCCTAAAGGAAGCACTTAGCGTGCAGAAAAATAACATAAACACCTACCGTCCCTCTAATAAGCTGATGCTATTTTCACCTGTTTGTCTGCCTTCAAAGGCCCTATGTGCAAAATACACAGGCTGTATAGGAGCTGAAAGCGTTGTGGTCTCGTTCTCCAACATGGACACAACCGAAGACATGAGTGGTCTATTATTTGGATTATCTTGCACGCACAATAGACCTATTTGGATACATAGTAAAACTTCAGTTGGTGAGCAACTCTTAGAAATGGATGAGTCCATCAAATCCATCGCCCTGTCGTTCTTCCACAAGTTCCATGCCTGAAACAGTGGAATCAAGTCCATATAAAATTAGTACAATTAATCTGAATTGTAGAGATAAAGCATTCCACCATACTTACATAAGCTAACAAATTGGGGAAGTCCGTCAGCCGAGGCAAGCTAATCTTCAAGCAACTTACAATCTCTAAGAGTATAACACCAAAGCTATATGTGTCGGATTTGACTGAAAAGGCGCCATCCATTGCATATTCAGGAGACATGTAACCGCTGCTTAATGATTTAGCAGTAAGTAAAGATTCGAGCAAATAAACATTGTGAACATTAATGCATGAATGACTCACTATGTTCCAACAACTCTGTTAGTATTTGCTTCATGCTGGTTGCCTCCAAAGATTCTTGCCATACCAAAATCTGATATCTTAGGACTCATATCAACATCCAATAAGATATTGCTTGGTTTGAGATCTCTATGAATTACAGTTAACCTTGAATCTTGGTGGAGATAAAGAAGTCCTCTAGCTACTCCTTTGATTATCTTGAACCTTGTTGGCCAATCAAGAACATATTTATTTGCATGATCTATAAGAATGGTAAACTATGTTATTATTAAGTATGCAGCCAAGTTTCTTTGGATCATATGATAAGTTTATGCAATACTGTAGTATATAAATCTGAACAGTACCAAAAATGAAAGCATCCAAGCTTTTGTTTGGCAAGTATTCGTAAATTAGCAGCTTCTCATCTCCGTATATACAATAACCAAGAAGTCTAACGAGGTTTCTATGCTGCAGTTTGGCAATTAGAACAGCTTCATTTCTGAACTCTTCTGCTCCTTGGCCAGAACCCTTGCTAAGCCTTTTAATTGCGACTTCTTTGCCGTCATCTAGCATTCCCTGCATAATTTAATCACTTTATTTTTTTTATTAAGAAGGCTGTTCATTTGTAAATGAGTGGTTTTACAGTTCCTGAAGACTGAAGTCTGAAAAGGTACTACAGTCTTAATATTAATTTGAGGTACCTCCATATTTGGGATGGTAAAAATCTCTCTGCTAATTTATCAGTACAGTGCAGGGGCATTCCTACTTCCTAGTTCCTTTTTTTTTTTTGACATGCTACTTCCTAGTTCCTAGTTCCTACAGCGTACTATACGGGGTCACGAGACCCTAGGTAAAATTTCAATCTCTAGTTGTTTTAGCCTATATTAACTATATTATTAGTTAAAAATTATAGTATTATATATGTTAGTTTTTGTCCCTATTGTAATTCTCAAGATAGAACTTATTTTGTACCTTGTAAACCTTCCCGAAGCCCCCTTGTCCGAGCATGTTGTCGTCAGAAAAATTGTTTGTGGCAGCAGCAATTTCTCCAAAACTAACAAACGGGAGCTCTAAATTTTCATCTCCAAGTTCATTTGATGCACTCAAGTATCCTAGAATCCCTCTCTTCTGGACAACCTTATTCTGATGACGTTTGCCTGACAGGACTACAAATATATATAGTGTGTTAATATTAGCTCTAGTAGGAGTAGAGGATATAAGCTGCGAGTATTACCTCTGCACTTGTATAACCATACAAGGAATATGCTCATCAGCAGAAGCAAACATGCTGCTGTAAGTGGGAGCATAATTTTTACCACAGTCCTCTTCTTATTGTTAACTGAATGGGAAGAAAATTTTCACCGAGAAAACCATAAAGTAATTAATTGCTGAACCCATTAGTTTCAGGCAAATGAATGCACATGCGTGCAATTTTGTGATAGTCATGTGTACCTAGTTCAGACTTTGCCAATCTCACATGCAAGTCCTGCCCTTTGTCCACATAACGAACATCAACCATGTCGCCGATCCACATGACGCAGCCGCGGCCGCTGATGTCCGCGGCGGCGTAGGCGACGCAGGAACAGTTGGCCAAGCACCTCGCCCTGCACTCGTCAAGCGTGGCGCCCGTGTCCACCGTGGCGTTGTCCGTGTCGGGGAGCTTCACGCCGCGCACCGTCACGAACCCGTCCGTGGTGCTCCCGTTGCCGCACTCCAGCGGCGCGTTCCTCCGGCACCCACCGGAGGTATCCCTCATGGACCACCGCGAGGGGGACACGGGGCTGAACCCCGCCATGCAGCTGCAGAAGAGCGTCGACGCGGTGTCCTCGTTGCACAGCCCGAACGCGCCGCACTTGGCGTAGTCGTCGCACACGCCGCGCGGTGCCTTCATGTACGGGATCCACACCTTGCTGCTGGGATCCCACACGAGGCGCTCGGTCACGCCGGCCTCGTCCAGCACGAGGCGGGAGAAGGGGGAGCCGGCGGCGGCGGCGGCGGTGAAGACGTAGGCGATCTCGTCGGGCGTGACCACCACCTGGCTCGAGAAGATGGATTCGTACGACGCCATCTCCGGGACGCCGCTGAACCACTGCCCGTTCCATGGCCCCGTCCGGTACTTCTTGGCGCCGCCGCACCACGTGACGCAGTCCGGGAGCCCCCTCGTGTCCAGCACGCGGCGGCAGTCTCCCGTCGCCGGGTCGTCGTGCGCGCGCCACGACGAGAGGAACCACGCGTCGCCGGTCTGCCGGTTGTTGCCGAGCCTCATCCCGGCGATCAGTGTGTTCGACGGGTGATCGAACGACTGCCAGATGAAGACACCGGTGTTCAGCTGGTCGCGCTCGCGCACGACGAGGTTTCCGGACTCCAGCAGCTGCGCCGCCGTCGCTGATGAAGACTTGCCAGTCGTGTTCGACGACCAGGCGGCCCTGCCGGAGCCGTCGAGTAGGACGAGCCCGCCCGCGCCATTGTTAACCAGTACGCCGGCGGTGTCGTTCAGTGGGCTGTCACGGTTGGCCACCCAGACGGCGTCCGCGGACTCGGAGAACCATATCGCGAGGTATCTCCTGCTTGGCAAGCCGAGTGAGAAGAAGCCCAGAGTGAAGGAGCCACCGGCCGACACGAGCGTGTTGCCGTCAGTGAGGTTGCGGCCATTGCTCAGAGTGTCCGATGCAACGCCGGCGGCAGATGTTCCGAGAGTAAGGAGGACCATGAAGAAGAAGGTGAGGCTAAGGTGGAAAATGTTGGCGGTTGCTGCTTCCATAACGGGTGAGTTTTTCTTGCACGTCCTTGCCCAGAATTGTTCACGGACTACAGTGCACGGGAACAGGTTGGCCTCACAAGTATCATACAT
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| CDS seq | ATGTATGATACTTGTGAGGCCAACCTGTTCCCGTGCACTGTAGTCCGTGAACAATTCTGGGCAAGGACGTGCAAGAAAAACTCACCCGTTATGGAAGCAGCAACCGCCAACATTTTCCACCTTAGCCTCACCTTCTTCTTCATGGTCCTCCTTACTCTCGGAACATCTGCCGCCGGCGTTGCATCGGACACTCTGAGCAATGGCCGCAACCTCACTGACGGCAACACGCTCGTGTCGGCCGGTGGCTCCTTCACTCTGGGCTTCTTCTCACTCGGCTTGCCAAGCAGGAGATACCTCGCGATATGGTTCTCCGAGTCCGCGGACGCCGTCTGGGTGGCCAACCGTGACAGCCCACTGAACGACACCGCCGGCGTACTGGTTAACAATGGCGCGGGCGGGCTCGTCCTACTCGACGGCTCCGGCAGGGCCGCCTGGTCGTCGAACACGACTGGCAAGTCTTCATCAGCGACGGCGGCGCAGCTGCTGGAGTCCGGAAACCTCGTCGTGCGCGAGCGCGACCAGCTGAACACCGGTGTCTTCATCTGGCAGTCGTTCGATCACCCGTCGAACACACTGATCGCCGGGATGAGGCTCGGCAACAACCGGCAGACCGGCGACGCGTGGTTCCTCTCGTCGTGGCGCGCGCACGACGACCCGGCGACGGGAGACTGCCGCCGCGTGCTGGACACGAGGGGGCTCCCGGACTGCGTCACGTGGTGCGGCGGCGCCAAGAAGTACCGGACGGGGCCATGGAACGGGCAGTGGTTCAGCGGCGTCCCGGAGATGGCGTCGTACGAATCCATCTTCTCGAGCCAGGTGGTGGTCACGCCCGACGAGATCGCCTACGTCTTCACCGCCGCCGCCGCCGCCGGCTCCCCCTTCTCCCGCCTCGTGCTGGACGAGGCCGGCGTGACCGAGCGCCTCGTGTGGGATCCCAGCAGCAAGGTGTGGATCCCGTACATGAAGGCACCGCGCGGCGTGTGCGACGACTACGCCAAGTGCGGCGCGTTCGGGCTGTGCAACGAGGACACCGCGTCGACGCTCTTCTGCAGCTGCATGGCGGGGTTCAGCCCCGTGTCCCCCTCGCGGTGGTCCATGAGGGATACCTCCGGTGGGTGCCGGAGGAACGCGCCGCTGGAGTGCGGCAACGGGAGCACCACGGACGGGTTCGTGACGGTGCGCGGCGTGAAGCTCCCCGACACGGACAACGCCACGGTGGACACGGGCGCCACGCTTGACGAGTGCAGGGCGAGGTGCTTGGCCAACTGTTCCTGCGTCGCCTACGCCGCCGCGGACATCAGCGGCCGCGGCTGCGTCATGTGGATCGGCGACATGGTTGATGTTCGTTATGTGGACAAAGGGCAGGACTTGCATGTGAGATTGGCAAAGTCTGAACTAGTTAACAATAAGAAGAGGACTGTGGTAAAAATTATGCTCCCACTTACAGCAGCATGTTTGCTTCTGCTGATGAGCATATTCCTTGTATGGTTATACAAGTGCAGAGTCCTGTCAGGCAAACGTCATCAGAATAAGGTTGTCCAGAAGAGAGGGATTCTAGGATACTTGAGTGCATCAAATGAACTTGGAGATGAAAATTTAGAGCTCCCGTTTGTTAGTTTTGGAGAAATTGCTGCTGCCACAAACAATTTTTCTGACGACAACATGCTCGGACAAGGGGGCTTCGGGAAGGTTTACAAGGGAATGCTAGATGACGGCAAAGAAGTCGCAATTAAAAGGCTTAGCAAGGGTTCTGGCCAAGGAGCAGAAGAGTTCAGAAATGAAGCTGTTCTAATTGCCAAACTGCAGCATAGAAACCTCGTTAGACTTCTTGGTTATTGTATATACGGAGATGAGAAGCTGCTAATTTACGAATACTTGCCAAACAAAAGCTTGGATGCTTTCATTTTTGATCATGCAAATAAATATGTTCTTGATTGGCCAACAAGGTTCAAGATAATCAAAGGAGTAGCTAGAGGACTTCTTTATCTCCACCAAGATTCAAGGTTAACTGTAATTCATAGAGATCTCAAACCAAGCAATATCTTATTGGATGTTGATATGAGTCCTAAGATATCAGATTTTGGTATGGCAAGAATCTTTGGAGGCAACCAGCATGAAGCAAATACTAACAGAGTTGTTGGAACATACGGTTACATGTCTCCTGAATATGCAATGGATGGCGCCTTTTCAGTCAAATCCGACACATATAGCTTTGGTGTTATACTCTTAGAGATTGTAAGTTGCTTGAAGATTAGCTTGCCTCGGCTGACGGACTTCCCCAATTTGTTAGCTTATGCATGGAACTTGTGGAAGAACGACAGGGCGATGGATTTGATGGACTCATCCATTTCTAAGAGTTGCTCACCAACTGAAGTTTTACTATGGCTCTCATCCTTCATCCTCTTCCTCTCATCTCCTCACAGGATCAAGCTTGGCCTCCCTCCCATTGGAGGGAAGCCCTTGCCATGCTTATTGGATTTTGTTCCAACAAACTTGGTGTTAAATAATTGA
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| Protein seq | MYDTCEANLFPCTVVREQFWARTCKKNSPVMEAATANIFHLSLTFFFMVLLTLGTSAAGVASDTLSNGRNLTDGNTLVSAGGSFTLGFFSLGLPSRRYLAIWFSESADAVWVANRDSPLNDTAGVLVNNGAGGLVLLDGSGRAAWSSNTTGKSSSATAAQLLESGNLVVRERDQLNTGVFIWQSFDHPSNTLIAGMRLGNNRQTGDAWFLSSWRAHDDPATGDCRRVLDTRGLPDCVTWCGGAKKYRTGPWNGQWFSGVPEMASYESIFSSQVVVTPDEIAYVFTAAAAAGSPFSRLVLDEAGVTERLVWDPSSKVWIPYMKAPRGVCDDYAKCGAFGLCNEDTASTLFCSCMAGFSPVSPSRWSMRDTSGGCRRNAPLECGNGSTTDGFVTVRGVKLPDTDNATVDTGATLDECRARCLANCSCVAYAAADISGRGCVMWIGDMVDVRYVDKGQDLHVRLAKSELVNNKKRTVVKIMLPLTAACLLLLMSIFLVWLYKCRVLSGKRHQNKVVQKRGILGYLSASNELGDENLELPFVSFGEIAAATNNFSDDNMLGQGGFGKVYKGMLDDGKEVAIKRLSKGSGQGAEEFRNEAVLIAKLQHRNLVRLLGYCIYGDEKLLIYEYLPNKSLDAFIFDHANKYVLDWPTRFKIIKGVARGLLYLHQDSRLTVIHRDLKPSNILLDVDMSPKISDFGMARIFGGNQHEANTNRVVGTYGYMSPEYAMDGAFSVKSDTYSFGVILLEIVSCLKISLPRLTDFPNLLAYAWNLWKNDRAMDLMDSSISKSCSPTEVLLWLSSFILFLSSPHRIKLGLPPIGGKPLPCLLDFVPTNLVLNN |
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| Function | Receptor-like serine/threonine-protein kinase SD1-8 [UniProtKB/Swiss-Prot:O81905] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_04G0511300 | OsZS97_04T0511300.1 | Chr04 | 33931656 | 33937168 | - | makerRMon | ||
| CDS seq | ATGGAAGGCATCTTCTCTGTCAAGTCTGACACCTACAGCTTTGGTGTTTTAGTTTTGGAACTTATAAGCGGCTCTAAGATAAGCTCTCCTCATCTTATAATGGGTTTTCCAAATCTTATAGCCTGTGCATGGAGCTTGTGGAAGAATGGAAAGGCAGAGGATCTCGTGGACTCAATTATTCTGCAGATATATTCACTTAATGAGTTTTTGCTCTGTATCCATGTAGGACTGTTATGCGTTCAGGAAGACCCAAATGCTAGACCACTCATGTCATCAGTTGTGGCCATGCTCGAGAATGAAGCCACAACACTTCCTACTCCTAAGCAACCTGCATATTTTGTGCCAAGGAATTGCATGGCAGGAGGGGCAAGAGAGGATGCCAACAAGTCTGTGAACAGTATAAGTCTTACCACACTACAAGGACGTTAA
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| Protein seq | MEGIFSVKSDTYSFGVLVLELISGSKISSPHLIMGFPNLIACAWSLWKNGKAEDLVDSIILQIYSLNEFLLCIHVGLLCVQEDPNARPLMSSVVAMLENEATTLPTPKQPAYFVPRNCMAGGAREDANKSVNSISLTTLQGR |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_04G0511300 | OsZS97_04T0511300.2 | Chr04 | 33933409 | 33937286 | - | makerRMon | ||
| CDS seq | ATGTATGATACTTGTGAGGCCAACCTGTTCCCGTGCACTGTAGTCCGTGAACAATTCTGGGCAAGGACGTGCAAGAAAAACTCACCCGTTATGGAAGCAGCAACCGCCAACATTTTCCACCTTAGCCTCACCTTCTTCTTCATGGTCCTCCTTACTCTCGGAACATCTGCCGCCGGCGTTGCATCGGACACTCTGAGCAATGGCCGCAACCTCACTGACGGCAACACGCTCGTGTCGGCCGGTGGCTCCTTCACTCTGGGCTTCTTCTCACTCGGCTTGCCAAGCAGGAGATACCTCGCGATATGGTTCTCCGAGTCCGCGGACGCCGTCTGGGTGGCCAACCGTGACAGCCCACTGAACGACACCGCCGGCGTACTGGTTAACAATGGCGCGGGCGGGCTCGTCCTACTCGACGGCTCCGGCAGGGCCGCCTGGTCGTCGAACACGACTGGCAAGTCTTCATCAGCGACGGCGGCGCAGCTGCTGGAGTCCGGAAACCTCGTCGTGCGCGAGCGCGACCAGCTGAACACCGGTGTCTTCATCTGGCAGTCGTTCGATCACCCGTCGAACACACTGATCGCCGGGATGAGGCTCGGCAACAACCGGCAGACCGGCGACGCGTGGTTCCTCTCGTCGTGGCGCGCGCACGACGACCCGGCGACGGGAGACTGCCGCCGCGTGCTGGACACGAGGGGGCTCCCGGACTGCGTCACGTGGTGCGGCGGCGCCAAGAAGTACCGGACGGGGCCATGGAACGGGCAGTGGTTCAGCGGCGTCCCGGAGATGGCGTCGTACGAATCCATCTTCTCGAGCCAGGTGGTGGTCACGCCCGACGAGATCGCCTACGTCTTCACCGCCGCCGCCGCCGCCGGCTCCCCCTTCTCCCGCCTCGTGCTGGACGAGGCCGGCGTGACCGAGCGCCTCGTGTGGGATCCCAGCAGCAAGGTGTGGATCCCGTACATGAAGGCACCGCGCGGCGTGTGCGACGACTACGCCAAGTGCGGCGCGTTCGGGCTGTGCAACGAGGACACCGCGTCGACGCTCTTCTGCAGCTGCATGGCGGGGTTCAGCCCCGTGTCCCCCTCGCGGTGGTCCATGAGGGATACCTCCGGTGGGTGCCGGAGGAACGCGCCGCTGGAGTGCGGCAACGGGAGCACCACGGACGGGTTCGTGACGGTGCGCGGCGTGAAGCTCCCCGACACGGACAACGCCACGGTGGACACGGGCGCCACGCTTGACGAGTGCAGGGCGAGGTGCTTGGCCAACTGTTCCTGCGTCGCCTACGCCGCCGCGGACATCAGCGGCCGCGGCTGCGTCATGTGGATCGGCGACATGGTTGATGTTCGTTATGTGGACAAAGGGCAGGACTTGCATGTGAGATTGGCAAAGTCTGAACTAGTTAACAATAAGAAGAGGACTGTGGTAAAAATTATGCTCCCACTTACAGCAGCATGTTTGCTTCTGCTGATGAGCATATTCCTTGTATGGTTATACAAGTGCAGAGTCCTGTCAGGCAAACGTCATCAGAATAAGGTTGTCCAGAAGAGAGGGATTCTAGGATACTTGAGTGCATCAAATGAACTTGGAGATGAAAATTTAGAGCTCCCGTTTGTTAGTTTTGGAGAAATTGCTGCTGCCACAAACAATTTTTCTGACGACAACATGCTCGGACAAGGGGGCTTCGGGAAGGTTTACAAGGGAATGCTAGATGACGGCAAAGAAGTCGCAATTAAAAGGCTTAGCAAGGGTTCTGGCCAAGGAGCAGAAGAGTTCAGAAATGAAGCTGTTCTAATTGCCAAACTGCAGCATAGAAACCTCGTTAGACTTCTTGGTTATTGTATATACGGAGATGAGAAGCTGCTAATTTACGAATACTTGCCAAACAAAAGCTTGGATGCTTTCATTTTTGATCATGCAAATAAATATGTTCTTGATTGGCCAACAAGGTTCAAGATAATCAAAGGAGTAGCTAGAGGACTTCTTTATCTCCACCAAGATTCAAGGTTAACTGTAATTCATAGAGATCTCAAACCAAGCAATATCTTATTGGATGTTGATATGAGTCCTAAGATATCAGATTTTGGTATGGCAAGAATCTTTGGAGGCAACCAGCATGAAGCAAATACTAACAGAGTTGTTGGAACATACGGTTACATGTCTCCTGAATATGCAATGGATGGCGCCTTTTCAGTCAAATCCGACACATATAGCTTTGGTGTTATACTCTTAGAGATTGTAAGTTGCTTGAAGATTAGCTTGCCTCGGCTGACGGACTTCCCCAATTTGTTAGCTTATGCATGGAACTTGTGGAAGAACGACAGGGCGATGGATTTGATGGACTCATCCATTTCTAAGAGTTGCTCACCAACTGAAGTTTTACTATGGCTCTCATCCTTCATCCTCTTCCTCTCATCTCCTCACAGGATCAAGCTTGGCCTCCCTCCCATTGGAGGGAAGCCCTTGCCATGCTTATTGGATTTTGTTCCAACAAACTTGGTGTTAAATAATTGA
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| Protein seq | MYDTCEANLFPCTVVREQFWARTCKKNSPVMEAATANIFHLSLTFFFMVLLTLGTSAAGVASDTLSNGRNLTDGNTLVSAGGSFTLGFFSLGLPSRRYLAIWFSESADAVWVANRDSPLNDTAGVLVNNGAGGLVLLDGSGRAAWSSNTTGKSSSATAAQLLESGNLVVRERDQLNTGVFIWQSFDHPSNTLIAGMRLGNNRQTGDAWFLSSWRAHDDPATGDCRRVLDTRGLPDCVTWCGGAKKYRTGPWNGQWFSGVPEMASYESIFSSQVVVTPDEIAYVFTAAAAAGSPFSRLVLDEAGVTERLVWDPSSKVWIPYMKAPRGVCDDYAKCGAFGLCNEDTASTLFCSCMAGFSPVSPSRWSMRDTSGGCRRNAPLECGNGSTTDGFVTVRGVKLPDTDNATVDTGATLDECRARCLANCSCVAYAAADISGRGCVMWIGDMVDVRYVDKGQDLHVRLAKSELVNNKKRTVVKIMLPLTAACLLLLMSIFLVWLYKCRVLSGKRHQNKVVQKRGILGYLSASNELGDENLELPFVSFGEIAAATNNFSDDNMLGQGGFGKVYKGMLDDGKEVAIKRLSKGSGQGAEEFRNEAVLIAKLQHRNLVRLLGYCIYGDEKLLIYEYLPNKSLDAFIFDHANKYVLDWPTRFKIIKGVARGLLYLHQDSRLTVIHRDLKPSNILLDVDMSPKISDFGMARIFGGNQHEANTNRVVGTYGYMSPEYAMDGAFSVKSDTYSFGVILLEIVSCLKISLPRLTDFPNLLAYAWNLWKNDRAMDLMDSSISKSCSPTEVLLWLSSFILFLSSPHRIKLGLPPIGGKPLPCLLDFVPTNLVLNN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.443925 | 0.0263595 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0632901 | RBH | 0.123529 | 0.471795 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g54020 | RBH | 0.216037 | 0.301662 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0632901 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0027850 | SBH | 0.131562 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0028600 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0028290 | SBH | 0.0 | 0.237076 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0013320 | SBH | 0.019342 | 0.033247 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0028350 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0507200 | RBH | 1.9603475 | 2.1253495 | 2.8731885 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0026980 | SBH | 0.129210 | 0.011754 | 0.285752 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0511500 | SBH | 0.007551 | 0 | 0.1434125 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0027410 | SBH | 0.0 | 0.037525 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0027200 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0027300 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0027880 | SBH | 0.176059 | 0.0 | 0.133201 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0027880 | SBH | 0.0 | 0.604004 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G012670 | SBH | 0.284199 | 0.643363 | 0.235737 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0012660 | SBH | 0.428041 | 1.303368 | 1.550173 |
