Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_02g0020650 | OGI:02001240 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr02:22612118-22615712 | ||||||||
| Gene Symbol | LRK3, OsLRK3, OsPSKR7, PSKR7, XIK1, OsXIK1 | ||||||||||
| DNA seq | gccatgtagtcagagaaaatggtagccatgtataccatccatcataaatcttagagattcgtattacaatttacaacaaagcagattgatcaaacaaggtagcatagtaagcacaagaacatcaccagcaacacgtattagggtcgtgtacaaaatgcaggtatgtttgacaaccacgcaattaacaccaacgaagtagagagaacacaaatcatcatacaagtgatgctttataatacttgacaagttgacattaacaggtgcaatagactgacctacctatggtgtgaattgccacattcttgtggggaaaaaaccctgagcaacatgagaaacagcaattttctgacaacattcactggtagtacgcagggatgattatgtcaacatgtagatggtcaggattgctaggtccttcagctgtagaaaacatccgagttacatgttgcattgttggacgacgtgatgggttggggtccaagcactggacagcagccatgatcactctaaatatttcacttgctgtctcagctttaggaagtgggatccgggcgtccaacaaatccttcaatgttgtactttccttggccatggagaaggacaaaaggaaatcaccaggatgatgccccatgaacagctcaaagacaagcactccgaagctataaacatcgcatttctctgtcacccttgttgtgtatgcaagctctgccatgtaaaaatttaagactttgtttcaacaaatttgcatatgtaaatagtatagaaggcattcgatgctatttttacaaaatgagatgcaaatttgcctaattgtatctaatatactactatgaatcaaagatatactagtaagacgaatactttaacagttagctcgaatatttgtcagagttacaaactaatatacaaaaggacaaagcaactgatttagtacaaatttacctggggcaaggtaacctttggtcccagcaagcttcgtgcagttcgatgcctccacatctagaactttggctataccaaaatcagatatgcaagctctgaattcctgatcgagcaaaatgttgttgcttgttatatctcgatggactatgggtgcaaagcaatcatgatgtatgtaagacaaagcattagcaacatctttgacaatacttatccttcgcatccaatccaattcaatcgcaatgttatggttctccaaatatcttgacaagcttcctctatccatgtattcgtagacaagaaatttgccgtggactgcagaacagtacccaaagagcttcacaatatttcgatgccgaattctcgtcaaagcatctatttctcgcttaaatattagctcgtcatattccatcatatgaattttctttactgcaaatatctcacctgttggtaactgagctctgtagacagatccatttcccccagttccaatgcagtgagtttcgttgaaatattttgttgtttcaaaaatctgcctgcatgcttctcctccctcaaagttccagactgaaaacacttttgcgtctccaactccattttcgctttgttccccatatttcttccttttgcattgccatgccactagtgacatgataaacacaatagacatgccagcagcaccaactataccaagtaaaatggatttgaatttctttccctggccacctttctgattaaggtcgcaagggggtaaagctttgactgtaccacacaactttttattgtgcatgaaccactcaatcggagcttcttccaagaagttaatatgtggcactggcccttccaaattattatatgatacatccagggatgagagactgatcataccctgaaatgatgatggtatgctgccgttcagtgtgttgtgtgaaagattcagagcttcgagcatgctcaaagcacccagctgacttggtatgatcccagaaaatgaattgtcacttagatccaacaattcttggaggcttaccaacatccctagtttaacaggaatgcttccatcgaggcgattatggcctagccttagtaatctaagtttcaaacagttctcaatcgatccatgtatctgtccacttaggttgtttgatgacaagtctaaatactccaaattttgtagagagcctacttcctttggtatggttccctggagcatgttgtttgcaaggctcaaattgaatagagacactacgttacaaatttctggtggaatgtgtccttcaatttcattcgatgaaacatcaagtctccctaactgagacaatttccccatgctcgatggtatgactccagtaatacgattatttgatgcacgtagagtggtaagtttggcgcactcaccccagcgatgagataattgtccatatagtttatttgagctcatgtcaatatagacaaggtttggatgaaggcccatctcggagatatctccttcaagttgatttcgctcaagacgaactctaaccagggttttgcagtttagcaagcttgttggcaatggcccaaccaggttgttatcctgagcagtgaaattctgtagctggcctccagcgcacagacccaatggtaattcaccagaaaggttgttttgatcgatatgcaaaatatttagattcattaagctgctaatttctttaggaatggatccagaaagttggttagaacgaatatgtaaggcagtgagtttagtcaaattccctaagctgttcgggatggaacctgtgagcatgttttcactaaggtataagttctctaaatttaccaagttacctagttcttgagaaatacacccagaaagttggtttctccaaacagataaggtggagagtctaggcaaattccctaagctgtttgggatggaacctatgagcttgttatcgtaaagttgtaggtcctttaagttcaacagggaacctagttcttgaggaatgtgccaagaaagtttgttgctttgaagatacaagaaacagagtttagccaaattccctaagttgtttggaatgtgcccggaaagttgattagaattaagttttaaggacctcaacctcactaaattaccaatttgctccggaatatgtccagagaggttattatctgaaagatccaaggacttgagctcctttaagttaatgatcttggttggaatggaatcaacaagactgttttgactaagattaaggtattctaggctcactaaatctcccagctcatggggaattggaccagttaattggttactggatagtgctaaaacctttagatttgacaaagatgatttattgttatatttacctggcttgtttgtcatgaacaagctgtctagacgaccaataatgttgttgttggacaaatccaatctaatcaacttactgaggaacccaatttcagaaggtatatgaccacccagttgattgcttgacaagtttaggctcacaagcctttttagactacatatttcctttggtattgaactcgaaagaaaattattgcttagcactaagaacctcagctttgttaaagatgttaaacctagttggaataaggagccccttatctgatttttgtgcaggatcaaggctctgagctctttgagagacat
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| CDS seq | atgtctctcaaagagctcagagccttgatcctgcacaaaaatcagataaggggctccttattccaactaggtttaacatctttaacaaagctgaggttcttagtgctaagcaataattttctttcgagttcaataccaaaggaaatatgtagtctaaaaaggcttgtgagcctaaacttgtcaagcaatcaactgggtggtcatataccttctgaaattgggttcctcagtaagttgattagattggatttgtccaacaacaacattattggtcgtctagacagcttgttcatgacaaacaagccaggtaaatataacaataaatcatctttgtcaaatctaaaggttttagcactatccagtaaccaattaactggtccaattccccatgagctgggagatttagtgagcctagaataccttaatcttagtcaaaacagtcttgttgattccattccaaccaagatcattaacttaaaggagctcaagtccttggatctttcagataataacctctctggacatattccggagcaaattggtaatttagtgaggttgaggtccttaaaacttaattctaatcaactttccgggcacattccaaacaacttagggaatttggctaaactctgtttcttgtatcttcaaagcaacaaactttcttggcacattcctcaagaactaggttccctgttgaacttaaaggacctacaactttacgataacaagctcataggttccatcccaaacagcttagggaatttgcctagactctccaccttatctgtttggagaaaccaactttctgggtgtatttctcaagaactaggtaacttggtaaatttagagaacttataccttagtgaaaacatgctcacaggttccatcccgaacagcttagggaatttgactaaactcactgccttacatattcgttctaaccaactttctggatccattcctaaagaaattagcagcttaatgaatctaaatattttgcatatcgatcaaaacaacctttctggtgaattaccattgggtctgtgcgctggaggccagctacagaatttcactgctcaggataacaacctggttgggccattgccaacaagcttgctaaactgcaaaaccctggttagagttcgtcttgagcgaaatcaacttgaaggagatatctccgagatgggccttcatccaaaccttgtctatattgacatgagctcaaataaactatatggacaattatctcatcgctggggtgagtgcgccaaacttaccactctacgtgcatcaaataatcgtattactggatgcttggaccccaacccatcacgtcgtccaacaatgcaacatgtaactcggatgttttctacagctgaaggacctagcaatcctgaccatctacatgttgacataatcatccctgcgtactaccagtga
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| Protein seq | MSLKELRALILHKNQIRGSLFQLGLTSLTKLRFLVLSNNFLSSSIPKEICSLKRLVSLNLSSNQLGGHIPSEIGFLSKLIRLDLSNNNIIGRLDSLFMTNKPGKYNNKSSLSNLKVLALSSNQLTGPIPHELGDLVSLEYLNLSQNSLVDSIPTKIINLKELKSLDLSDNNLSGHIPEQIGNLVRLRSLKLNSNQLSGHIPNNLGNLAKLCFLYLQSNKLSWHIPQELGSLLNLKDLQLYDNKLIGSIPNSLGNLPRLSTLSVWRNQLSGCISQELGNLVNLENLYLSENMLTGSIPNSLGNLTKLTALHIRSNQLSGSIPKEISSLMNLNILHIDQNNLSGELPLGLCAGGQLQNFTAQDNNLVGPLPTSLLNCKTLVRVRLERNQLEGDISEMGLHPNLVYIDMSSNKLYGQLSHRWGECAKLTTLRASNNRITGCLDPNPSRRPTMQHVTRMFSTAEGPSNPDHLHVDIIIPAYYQ |
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| Function | Probable leucine-rich repeat receptor-like protein kinase At1g35710 [UniProtKB/Swiss-Prot:Q9LP24] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_02g0020650 | OsPr106_02g0020650.01 | Chr02 | 22612118 | 22615712 | - | NAM | ||
| CDS seq | atgtctctcaaagagctcagagccttgatcctgcacaaaaatcagataaggggctccttattccaactaggtttaacatctttaacaaagctgaggttcttagtgctaagcaataattttctttcgagttcaataccaaaggaaatatgtagtctaaaaaggcttgtgagcctaaacttgtcaagcaatcaactgggtggtcatataccttctgaaattgggttcctcagtaagttgattagattggatttgtccaacaacaacattattggtcgtctagacagcttgttcatgacaaacaagccaggtaaatataacaataaatcatctttgtcaaatctaaaggttttagcactatccagtaaccaattaactggtccaattccccatgagctgggagatttagtgagcctagaataccttaatcttagtcaaaacagtcttgttgattccattccaaccaagatcattaacttaaaggagctcaagtccttggatctttcagataataacctctctggacatattccggagcaaattggtaatttagtgaggttgaggtccttaaaacttaattctaatcaactttccgggcacattccaaacaacttagggaatttggctaaactctgtttcttgtatcttcaaagcaacaaactttcttggcacattcctcaagaactaggttccctgttgaacttaaaggacctacaactttacgataacaagctcataggttccatcccaaacagcttagggaatttgcctagactctccaccttatctgtttggagaaaccaactttctgggtgtatttctcaagaactaggtaacttggtaaatttagagaacttataccttagtgaaaacatgctcacaggttccatcccgaacagcttagggaatttgactaaactcactgccttacatattcgttctaaccaactttctggatccattcctaaagaaattagcagcttaatgaatctaaatattttgcatatcgatcaaaacaacctttctggtgaattaccattgggtctgtgcgctggaggccagctacagaatttcactgctcaggataacaacctggttgggccattgccaacaagcttgctaaactgcaaaaccctggttagagttcgtcttgagcgaaatcaacttgaaggagatatctccgagatgggccttcatccaaaccttgtctatattgacatgagctcaaataaactatatggacaattatctcatcgctggggtgagtgcgccaaacttaccactctacgtgcatcaaataatcgtattactggatgcttggaccccaacccatcacgtcgtccaacaatgcaacatgtaactcggatgttttctacagctgaaggacctagcaatcctgaccatctacatgttgacataatcatccctgcgtactaccagtga
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| Protein seq | MSLKELRALILHKNQIRGSLFQLGLTSLTKLRFLVLSNNFLSSSIPKEICSLKRLVSLNLSSNQLGGHIPSEIGFLSKLIRLDLSNNNIIGRLDSLFMTNKPGKYNNKSSLSNLKVLALSSNQLTGPIPHELGDLVSLEYLNLSQNSLVDSIPTKIINLKELKSLDLSDNNLSGHIPEQIGNLVRLRSLKLNSNQLSGHIPNNLGNLAKLCFLYLQSNKLSWHIPQELGSLLNLKDLQLYDNKLIGSIPNSLGNLPRLSTLSVWRNQLSGCISQELGNLVNLENLYLSENMLTGSIPNSLGNLTKLTALHIRSNQLSGSIPKEISSLMNLNILHIDQNNLSGELPLGLCAGGQLQNFTAQDNNLVGPLPTSLLNCKTLVRVRLERNQLEGDISEMGLHPNLVYIDMSSNKLYGQLSHRWGECAKLTTLRASNNRITGCLDPNPSRRPTMQHVTRMFSTAEGPSNPDHLHVDIIIPAYYQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0211800 | SBH | 0.720620 | 0.353773 | 0.376538 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g34800 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0211800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0024890 | SBH | 0.266269 | 0.551824 | 0.649657 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0025040 | SBH | 0.095130 | 0.000000 | 0.117828 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0004170 | RBH | 0.137843 | 1.557139 | 0.736899 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0020740 | RBH | 0.027518 | 0.028389 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0004740 | SBH | 4.526733 | 0.899943 | 2.512842 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0344500 | RBH | 0.051288 | 0.072233 | 0.008266 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0020380 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0369700 | RBH | 0.00825 | 0.0766175 | 0.0391675 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0004180 | SBH | 0.043297 | 0.057747 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0003980 | SBH | 0.070042 | 4.234505 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0021060 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0024690 | RBH | 0.035031 | 0.082412 | 0.021348 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0004290 | SBH | 0.032945 | 0.534010 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G004310 | SBH | 0.850914 | 0.737580 | 0.524094 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0004260 | RBH | 0.000000 | 0.353235 | 0.384476 |
