Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_11g0690332 | OGI:11010520 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr11:28075457-28076938 | ||||||||
| Gene Symbol | WAK3 | ||||||||||
| DNA seq | ATGGCACAAGGAGTGATGCTGTGGTATGACCTCCATGCTCTGGCTGCAGCCGTGGGGCCACTGCTACTAGTTTCTTCTGTGCTGGTGGCTACGTCGTCGACGGCGGCGAACTGCGGCAGGAAGTGTGGCGACGTTCGCATCCCCTACCCGTTCGGCATCGGCGTCGACTGCGCCTGGCCGGGCTTCCACGTCTCTTGCAACCATAGCTTTACCCCTCCCAGACCCTACTTGTACAACATAGAGATCAAGGACATCTCGGTGGAGGCAGGGGAGATGCGCGTGTACACTGACGTCGTGTCCAACTGCTATACTTCGTACAATACCACCGAATACGTAACGACCTCCTCGCAGGTCGACCTCGGTACGCCGTTCCTGTTTGCGCGGAGCAGGAACGAGTTCACGGCCATCGGCTGTGGCGCGATTGCGTTTCTACGGGGCAGGGACGATGCGAGCTACTCGACCGGCTGCATCACGACGTGCGCGAGCTTGGAGGAGGCCGCCCACGACGGTGACGACTGCACGGGGCTGGGTTGCTGCCAGGTGCCCTCCATCCCACCCAACCTTAGCGTCTTAAACTTTTCCTTCGGCTCCGGAAGCATGATCGGCAACCCTGCTTGGAGAGAGAGCCCGTGTAGCTACGCATTCGTGTCCGAGAAAGGCTGGTACGTACCAACTAATGCGTGCCCACTGTACGTCTGTACAGCTGCGCAGCTAGCTCTTTCTCCCTCATTCCTTAAATGTTTAACGCCATTGACTTTTTTAAACATTTTTAACCGTCCGTCTTATTTAAAGCTTTTGTGAAATATGTAATATATATATATACATAAAAGTATATTTATCAATGAATCAAATGATAGGAAAAGAATTAATAATTGCTTAAATTTTTTTTTAATAAGACGAACGGTCAAACAAATTTAAAAAAGTCAACGACGTCAAACATTTAGGGATGGAGGGAGTAATAAAAATGCAATTACAAACTACTCTCTCTCTCTCTTCCGACATGGACTGGTGCCGTGTTTAGTTTCAAAGTTTTTCTTCAAACTTTCAACTTTTCCATCACATCAAAACTTTCCTACATATACAAACTTCTAACTTTTCCGTCACATCGTTCCAATTTCAACCAAAATTTTAATTTTAACGTGAACTAAACGCAGCCTGGGTTAATTATATTTTACTGATGCATTATATATATGTACATGATTTAGGTACAATTTCAGCCGGCAAGATTTCGGTCGTGCTGGCAGCAAGGGCTTATTTGTCGAGAGTGATGGAGCCAAAAGTGTCCCAACTGTACTTGACTGGGCCATCAGGGGAAATGGGTCGTGCCCGTCAACTGCAGGAGAGGTTGCTCCTGCTTGTATCAGCGCACATAGTGAGTGCGCCAACGTCACCAACGGAGAGGGGTACCTCTGCAATTGTTCCACGGGATACGCCGGCAATCCCTATGTCATCGGCGGATGCATAAGTAAGTTCTTAATTTAG
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| CDS seq | ATGGCACAAGGAGTGATGCTGTGGTATGACCTCCATGCTCTGGCTGCAGCCGTGGGGCCACTGCTACTAGTTTCTTCTGTGCTGGTGGCTACGTCGTCGACGGCGGCGAACTGCGGCAGGAAGTGTGGCGACGTTCGCATCCCCTACCCGTTCGGCATCGGCGTCGACTGCGCCTGGCCGGGCTTCCACGTCTCTTGCAACCATAGCTTTACCCCTCCCAGACCCTACTTGTACAACATAGAGATCAAGGACATCTCGGTGGAGGCAGGGGAGATGCGCGTGTACACTGACGTCGTGTCCAACTGCTATACTTCGTACAATACCACCGAATACGTAACGACCTCCTCGCAGGTCGACCTCGGTACGCCGTTCCTGTTTGCGCGGAGCAGGAACGAGTTCACGGCCATCGGCTGTGGCGCGATTGCGTTTCTACGGGGCAGGGACGATGCGAGCTACTCGACCGGCTGCATCACGACGTGCGCGAGCTTGGAGGAGGCCGCCCACGACGGTGACGACTGCACGGGGCTGGGTTGCTGCCAGGTGCCCTCCATCCCACCCAACCTTAGCGTCTTAAACTTTTCCTTCGGCTCCGGAAGCATGATCGGCAACCCTGCTTGGAGAGAGAGCCCGTGTAGCTACGCATTCGTGTCCGAGAAAGGCTGGTACAATTTCAGCCGGCAAGATTTCGGTCGTGCTGGCAGCAAGGGCTTATTTGTCGAGAGTGATGGAGCCAAAAGTGTCCCAACTGTACTTGACTGGGCCATCAGGGGAAATGGGTCGTGCCCGTCAACTGCAGGAGAGGTTGCTCCTGCTTGTATCAGCGCACATAGTGAGTGCGCCAACGTCACCAACGGAGAGGGGTACCTCTGCAATTGTTCCACGGGATACGCCGGCAATCCCTATGTCATCGGCGGATGCATAAGTAAGTTCTTAATTTAG
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| Protein seq | MAQGVMLWYDLHALAAAVGPLLLVSSVLVATSSTAANCGRKCGDVRIPYPFGIGVDCAWPGFHVSCNHSFTPPRPYLYNIEIKDISVEAGEMRVYTDVVSNCYTSYNTTEYVTTSSQVDLGTPFLFARSRNEFTAIGCGAIAFLRGRDDASYSTGCITTCASLEEAAHDGDDCTGLGCCQVPSIPPNLSVLNFSFGSGSMIGNPAWRESPCSYAFVSEKGWYNFSRQDFGRAGSKGLFVESDGAKSVPTVLDWAIRGNGSCPSTAGEVAPACISAHSECANVTNGEGYLCNCSTGYAGNPYVIGGCISKFLI |
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| Function | Wall-associated receptor kinase 3 [UniProtKB/Swiss-Prot:Q9LMN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_11g0690332 | OsNip_11t0690332-00 | Chr11 | 28075457 | 28076938 | + | RAP2018-11-26 | ||
| CDS seq | ATGGCACAAGGAGTGATGCTGTGGTATGACCTCCATGCTCTGGCTGCAGCCGTGGGGCCACTGCTACTAGTTTCTTCTGTGCTGGTGGCTACGTCGTCGACGGCGGCGAACTGCGGCAGGAAGTGTGGCGACGTTCGCATCCCCTACCCGTTCGGCATCGGCGTCGACTGCGCCTGGCCGGGCTTCCACGTCTCTTGCAACCATAGCTTTACCCCTCCCAGACCCTACTTGTACAACATAGAGATCAAGGACATCTCGGTGGAGGCAGGGGAGATGCGCGTGTACACTGACGTCGTGTCCAACTGCTATACTTCGTACAATACCACCGAATACGTAACGACCTCCTCGCAGGTCGACCTCGGTACGCCGTTCCTGTTTGCGCGGAGCAGGAACGAGTTCACGGCCATCGGCTGTGGCGCGATTGCGTTTCTACGGGGCAGGGACGATGCGAGCTACTCGACCGGCTGCATCACGACGTGCGCGAGCTTGGAGGAGGCCGCCCACGACGGTGACGACTGCACGGGGCTGGGTTGCTGCCAGGTGCCCTCCATCCCACCCAACCTTAGCGTCTTAAACTTTTCCTTCGGCTCCGGAAGCATGATCGGCAACCCTGCTTGGAGAGAGAGCCCGTGTAGCTACGCATTCGTGTCCGAGAAAGGCTGGTACAATTTCAGCCGGCAAGATTTCGGTCGTGCTGGCAGCAAGGGCTTATTTGTCGAGAGTGATGGAGCCAAAAGTGTCCCAACTGTACTTGACTGGGCCATCAGGGGAAATGGGTCGTGCCCGTCAACTGCAGGAGAGGTTGCTCCTGCTTGTATCAGCGCACATAGTGAGTGCGCCAACGTCACCAACGGAGAGGGGTACCTCTGCAATTGTTCCACGGGATACGCCGGCAATCCCTATGTCATCGGCGGATGCATAAGTAAGTTCTTAATTTAG
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| Protein seq | MAQGVMLWYDLHALAAAVGPLLLVSSVLVATSSTAANCGRKCGDVRIPYPFGIGVDCAWPGFHVSCNHSFTPPRPYLYNIEIKDISVEAGEMRVYTDVVSNCYTSYNTTEYVTTSSQVDLGTPFLFARSRNEFTAIGCGAIAFLRGRDDASYSTGCITTCASLEEAAHDGDDCTGLGCCQVPSIPPNLSVLNFSFGSGSMIGNPAWRESPCSYAFVSEKGWYNFSRQDFGRAGSKGLFVESDGAKSVPTVLDWAIRGNGSCPSTAGEVAPACISAHSECANVTNGEGYLCNCSTGYAGNPYVIGGCISKFLI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.591448 | 1.521705 | 0.750162 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0691400 | RBH | 1.234806 | 0.352146 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g46900 | SBH | 0.800670 | 0.491920 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0690332 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024570 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0024510 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0024040 | SBH | 0.0 | 29.071442 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023790 | SBH | 0.357024 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0024380 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0443700 | SBH | 0.0665605 | 0.0833025 | 0.0615995 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024710 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0439400 | RBH | 2.028648 | 0.349017 | 0.0047145 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024620 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0024690 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023960 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023810 | RBH | 2.759746 | 0.0 | 0.221914 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0024220 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G024230 | RBH | 0.600835 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0024450 | RBH | 0.000000 | 0.0 | 0.0 |
