Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_11g0024040 | OGI:11011080 | 2/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr11:27974290-27979190 | ||||||||
| Gene Symbol | WAK3 | ||||||||||
| DNA seq | cacattctagcaacaccatagctagcggccatggcacaaggagtgatgctgtggtatgatgatctcctagcagtattagtactttctgtgctggtggctacgtcgtcgacggcggcgaactgcggcaggaagtgcggcgacgtgcgcatcccctacccgtttggcatcggcgtcgactgcgcctggccgggcttcaacgtctcttgcaaccatagcttcagccctcccagaccctactacggcaacatagagatcatggacatctcggtggcggcgggggagacgcgcgtgtacacttccgtgctgcaaaactgcttcgacttgtccaacaccagcagcagctccgagtccgacgtagactcgccatggctcaacctcaccgggacgccgttccttgtgtcgccggagaggaacgagttcacggccaccgggtgcgacacgctggggctgatgtacggcagggaggacgggagctacttgaccggctgcgtcacgacgtgcgcgagcttggataccgccgccaacgacgatgaccactgcgcggggctgggttgctgccagatccagtccatccctggaaacctcaccatacttgagatgacgttgtcggccaacatcaccgagggcaagattgctgcgtggaacccatgccgctacgcctttttagccgagcgagacaggtacgtgttaccacctccgttttaaaacatactccatacatttcgaaatatttgacaccgttgactttttagtacatgtttgaccgttcgtcttattctaaaacttttgtaaaatatgtaaaattatatgcctacataaaaatatatttaacaataaatcaaatgataggaaaagaattaataattacttaaattttttgaataagacgaacggtcaaacatatttaaaaaagtcaacggcgtcaaacaatttgaaacggagtgagtactatacaggacatattttgtttggtcactaaaatatactccctcctccgtccctaaatatttaacgccgttgatttttttaaatatgtttgaccgttcatcttatttaaaaatttttatgaaatatgtaaaactatatgtatatagaaaagtacgtatatttaacaattaatcaaatgatggaaaacaattaataattacttaaatgttttgaataagacgaacgatcaaacatgtttaaaaaaagtcaacgatgtcaaatatttagggacagagggagtaatttttatgatgaaaaatgaatatactccctccgtcctaaaatataagcatttttggaccctgacacagtcttcaagatgccactttgaccaacaatatctataaaagtaaaatattttaaataaaataaattgagtaaattgtattggtggtacacaaacttgttaggtgggtgcaacttagtacatgaacttgtaaaatggtcgtttgggtacgcgaacttatctaatccgtgcgaactaggtccaaaatggcttggtaagtttaattttacctagctggtgttgattagaatgtgccgtgcatactaagtatgcataaaacatgttatatttataaatttgttctactttatcttgaatttcatatgtttctaaccattgtatcattgctcggtttattaaatctttctctacaatcattatatcttattctatcttttcattgaataggtgtaagtctatgtagcaaccttctctaaatcaacaaaattagtcatataatcttcttttgaccttagttcacacgcgcaagataagttcatgtaccaaaacgagcattttataagttcatacactagattgcacatacctgacaagttcgtatatcgctgatgcaatttactcaaaaaaagttccatattatgatagtttgtttaatgataaatgtagtaacatcaattttacattattgtctttttcattttttttgttattaatggtttaagttaaaaatgtttgacttatcactatgctaaaaatgcttatattttaggacagagggagtattagattatcaaaagtatttacttatgatatattatactttattagcacataaatgatatcttcgtagagtaatatatatcgttgatcaaagttgtgatatatctttaaatgtattttaatacaatcatgtacttgttgatatttctacatatattaatagaaaatcgtgttatttttaaatatggagggagtatatgtttactactccatacatagtttctattttagagaggaaaaccaatgcatgcagaccataaataatgttctgaaccttatttgctttgctaatttgtttggttaatcttccattcattaggactagcgaagagtatgtatgtatgagtagtgcatgagttgtatttgtttggttaatctaccaacatatatagcaaaatccagctagtgttgcgctaatttttcaagacaaatatgcctatagtgccattttaattaattaactaattaacaaatggcccaccaagatatttggtgcagaaggcaatcaatatcttcaaaccttgaaaaatatatatccgagtagacatactatttcaatattatgaactagtaatttttgatcatacaattcagatacaattttagtcggaaggatttcggtcgctcaggcaacaagatatttgcaaaccgggacggcgagatggtcgtccctacagtgcttgactgggccatcaggggaacaaatgggtcatgctcggggtctgtagcccctgcttgcctcagcgaccacagctactgcgccaatgccactaacggggacgggtatctctgcaagtgctccaagggatacgacggcaatccctatctcaaagccggcaatggcggatgcacaggttagttcttaattaaatttccttaattcttcaccatggattatatatcattactagtacaatatcactcattgacaatgtaatatggggattattgaaatgtactgttttaccactgatacatgttctgcatgcagatattgatgaatgcaaggaaccagatcgttgttctactggcagcagatgccataacacagagggtgattattattgcaaatgccgttttccacgtagaggggatggcaaaattaatggcaaaggatgccaccttcccaaatatatggtccccacggttggtacgtaagcaagcgttaattaattattctccgcacttattactgcaatagaaacatcctaaagttcttctggctagctctacgaagtggtgggctagccggtctggatccgagggctcgtccctataaattatttgatattagatcattccctaacattcgcagtgcagtctgatttgaatcaatggctcgttctttcagttgatcatttgatttgtctgcatatatacagcgacggtgtgcactgtgatttttcttgtggtccttgtgtgcttgtataagagacggaagagaagaatgttcgccaacaacaatggtggccggctgctcaaggatatgaatatcgttctctttacggagaaagacctaaacaagatgacaaagaataggagcaccaagatcctcggagagggttccttcggcaaggtctacatgggaacccacaagaaccagctagttgctgtcaagtactccaagggaaagcgcaaggccgcacggatgcatggcgtagacatcaagtgcatgaaccaaaatgtgttccaaaacgccttttgttggtccaaagttccatcgccagaagattcgtcgtcaccattgcccgagtccatggacgagataagggtccagtcactgatccagcacgaaaacgtggtcaccctcgttgggtgttgcatagagacggaggaacccacgttgatccttgaatttatccctaacgggagcctcgagaaaatgcttcatggaggtgaccagcgccccctctcgctattgcaacgccttgacattgccatcggctctgcgaaggctctttcttacatgcactcatctacactcgtccatggagatgtcaaactatccaatatcctccttgatgacaaactgatccctaaggtctctgactttgggtcagctgagctcacattgaaaatcaagctcgtgtgtggtgacctggactatatcgatcccgtgttcctgcagacccacaatttcacgatgaagagcgatgtctatagctatggggtagttctcctagagctcatcacccggaaaagggccaagtacgacgatgggagaagcctcccagtagaatttgtgaaacactacaaagacaacaacgaaaggaggaagatgtatgatcaggatatgttgtcgtctatggatgcactactgcagccttactgcacggagtgccttgacaggattgcgccattgcggtccgatgtctcaaaaacaaggtggagaagagaccaaccatggcggaggtggtcgaggagcttaagcagctgagagagcaaataagcacgcgtatgtcctagctaaactgctgcaactaatgccgggtgcaggaatccatcagctcgagtagaagatgaatgttcttctttgcctcgtattcttcagtctctcaattagttggtctctcgtcaatggttttcctttgcctctttgttaatttctccccacccctgcaaatagcagatatcgcgtatactcacattatagtttgagtttgagtacgttgacgcgatatgtactattccaccgtttctcttgttatccgtgtagtgttatgtggtactgtgttgtctcagaaagaaatgttgtggtgctattttttctatctttttactataccttttgtagctgcggtatcttttgtaataatgtaattaacgtaatggtaagctggacatgtattgcacccatgttgtgaaataataaatgacctcattggcc
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| CDS seq | atggcacaaggagtgatgctgtggtatgatgatctcctagcagtattagtactttctgtgctggtggctacgtcgtcgacggcggcgaactgcggcaggaagtgcggcgacgtgcgcatcccctacccgtttggcatcggcgtcgactgcgcctggccgggcttcaacgtctcttgcaaccatagcttcagccctcccagaccctactacggcaacatagagatcatggacatctcggtggcggcgggggagacgcgcgtgtacacttccgtgctgcaaaactgcttcgacttgtccaacaccagcagcagctccgagtccgacgtagactcgccatggctcaacctcaccgggacgccgttccttgtgtcgccggagaggaacgagttcacggccaccgggtgcgacacgctggggctgatgtacggcagggaggacgggagctacttgaccggctgcgtcacgacgtgcgcgagcttggataccgccgccaacgacgatgaccactgcgcggggctgggttgctgccagatccagtccatccctggaaacctcaccatacttgagatgacatacaattttagtcggaaggatttcggtcgctcaggcaacaagatatttgcaaaccgggacggcgagatggtcgtccctacagtgcttgactgggccatcaggggaacaaatgggtcatgctcggggtctgtagcccctgcttgcctcagcgaccacagctactgcgccaatgccactaacggggacgggtatctctgcaagtgctccaagggatacgacggcaatccctatctcaaagccggcaatggcggatgcacagatattgatgaatgcaaggaaccagatcgttgttctactggcagcagatgccataacacagagggtgattattattgcaaatgccgttttccacgtagaggggatggcaaaattaatggcaaaggatgccaccttcccaaatatatggtccccacgagacggaagagaagaatgttcgccaacaacaatggtggccggctgctcaaggatatgaatatcgttctctttacggagaaagacctaaacaagatgacaaagaataggagcaccaagatcctcggagagggttccttcggcaaggtctacatgggaacccacaagaaccagctagttgctgtcaagtactccaagggaaagcgcaaggccgcacggatgcatggcgtagacatcaagtgcatgaaccaaaatgtgttccaaaacgccttttgttggtccaaagttccatcgccagaagattcgtcgtcaccattgcccgagtccatggacgagataagggtccagtcactgatccagcacgaaaacgtggtcaccctcgttgggtgttgcatagagacggaggaacccacgttgatccttgaatttatccctaacgggagcctcgagaaaatgcttcatggaggtgaccagcgccccctctcgctattgcaacgccttgacattgccatcggctctgcgaaggctctttcttacatgcactcatctacactcgtccatggagatgtcaaactatccaatatcctccttgatgacaaactgatccctaaggtctctgactttgggtcagctgagctcacattgaaaatcaagctcgtgtgtggtgacctggactatatcgatcccgtgttcctgcagacccacaatttcacgatgaagagcgatgtctatagctatggggtagttctcctagagctcatcacccggaaaagggccaagtacgacgatgggagaagcctcccagtagaatttgtgaaacactacaaagacaacaacgaaaggaggaagatgtatgatcaggatatgttgtcgtctatggatgcactactgcagccttactgcacggagtgccttgacaggattgcgccattgcggtccgatgtctcaaaaacaaggtggagaagagaccaaccatggcggaggtggtcgaggagcttaagcagctga
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| Protein seq | MAQGVMLWYDDLLAVLVLSVLVATSSTAANCGRKCGDVRIPYPFGIGVDCAWPGFNVSCNHSFSPPRPYYGNIEIMDISVAAGETRVYTSVLQNCFDLSNTSSSSESDVDSPWLNLTGTPFLVSPERNEFTATGCDTLGLMYGREDGSYLTGCVTTCASLDTAANDDDHCAGLGCCQIQSIPGNLTILEMTYNFSRKDFGRSGNKIFANRDGEMVVPTVLDWAIRGTNGSCSGSVAPACLSDHSYCANATNGDGYLCKCSKGYDGNPYLKAGNGGCTDIDECKEPDRCSTGSRCHNTEGDYYCKCRFPRRGDGKINGKGCHLPKYMVPTRRKRRMFANNNGGRLLKDMNIVLFTEKDLNKMTKNRSTKILGEGSFGKVYMGTHKNQLVAVKYSKGKRKAARMHGVDIKCMNQNVFQNAFCWSKVPSPEDSSSPLPESMDEIRVQSLIQHENVVTLVGCCIETEEPTLILEFIPNGSLEKMLHGGDQRPLSLLQRLDIAIGSAKALSYMHSSTLVHGDVKLSNILLDDKLIPKVSDFGSAELTLKIKLVCGDLDYIDPVFLQTHNFTMKSDVYSYGVVLLELITRKRAKYDDGRSLPVEFVKHYKDNNERRKMYDQDMLSSMDALLQPYCTECLDRIAPLRSDVSKTRWRRDQPWRRWSRSLSS |
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| Function | Wall-associated receptor kinase 1 [UniProtKB/Swiss-Prot:Q39191] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_11g0024040 | OsCMeo_11g0024040.01 | Chr11 | 27974320 | 27978740 | + | NAM | ||
| CDS seq | atggcacaaggagtgatgctgtggtatgatgatctcctagcagtattagtactttctgtgctggtggctacgtcgtcgacggcggcgaactgcggcaggaagtgcggcgacgtgcgcatcccctacccgtttggcatcggcgtcgactgcgcctggccgggcttcaacgtctcttgcaaccatagcttcagccctcccagaccctactacggcaacatagagatcatggacatctcggtggcggcgggggagacgcgcgtgtacacttccgtgctgcaaaactgcttcgacttgtccaacaccagcagcagctccgagtccgacgtagactcgccatggctcaacctcaccgggacgccgttccttgtgtcgccggagaggaacgagttcacggccaccgggtgcgacacgctggggctgatgtacggcagggaggacgggagctacttgaccggctgcgtcacgacgtgcgcgagcttggataccgccgccaacgacgatgaccactgcgcggggctgggttgctgccagatccagtccatccctggaaacctcaccatacttgagatgacatacaattttagtcggaaggatttcggtcgctcaggcaacaagatatttgcaaaccgggacggcgagatggtcgtccctacagtgcttgactgggccatcaggggaacaaatgggtcatgctcggggtctgtagcccctgcttgcctcagcgaccacagctactgcgccaatgccactaacggggacgggtatctctgcaagtgctccaagggatacgacggcaatccctatctcaaagccggcaatggcggatgcacagatattgatgaatgcaaggaaccagatcgttgttctactggcagcagatgccataacacagagggtgattattattgcaaatgccgttttccacgtagaggggatggcaaaattaatggcaaaggatgccaccttcccaaatatatggtccccacgagacggaagagaagaatgttcgccaacaacaatggtggccggctgctcaaggatatgaatatcgttctctttacggagaaagacctaaacaagatgacaaagaataggagcaccaagatcctcggagagggttccttcggcaaggtctacatgggaacccacaagaaccagctagttgctgtcaagtactccaagggaaagcgcaaggccgcacggatgcatggcgtagacatcaagtgcatgaaccaaaatgtgttccaaaacgccttttgttggtccaaagttccatcgccagaagattcgtcgtcaccattgcccgagtccatggacgagataagggtccagtcactgatccagcacgaaaacgtggtcaccctcgttgggtgttgcatagagacggaggaacccacgttgatccttgaatttatccctaacgggagcctcgagaaaatgcttcatggaggtgaccagcgccccctctcgctattgcaacgccttgacattgccatcggctctgcgaaggctctttcttacatgcactcatctacactcgtccatggagatgtcaaactatccaatatcctccttgatgacaaactgatccctaaggtctctgactttgggtcagctgagctcacattgaaaatcaagctcgtgtgtggtgacctggactatatcgatcccgtgttcctgcagacccacaatttcacgatgaagagcgatgtctatagctatggggtagttctcctagagctcatcacccggaaaagggccaagtacgacgatgggagaagcctcccagtagaatttgtgaaacactacaaagacaacaacgaaaggaggaagatgtatgatcaggatatgttgtcgtctatggatgcactactgcagccttactgcacggagtgccttgacaggattgcgccattgcggtccgatgtctcaaaaacaaggtggagaagagaccaaccatggcggaggtggtcgaggagcttaagcagctga
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| Protein seq | MAQGVMLWYDDLLAVLVLSVLVATSSTAANCGRKCGDVRIPYPFGIGVDCAWPGFNVSCNHSFSPPRPYYGNIEIMDISVAAGETRVYTSVLQNCFDLSNTSSSSESDVDSPWLNLTGTPFLVSPERNEFTATGCDTLGLMYGREDGSYLTGCVTTCASLDTAANDDDHCAGLGCCQIQSIPGNLTILEMTYNFSRKDFGRSGNKIFANRDGEMVVPTVLDWAIRGTNGSCSGSVAPACLSDHSYCANATNGDGYLCKCSKGYDGNPYLKAGNGGCTDIDECKEPDRCSTGSRCHNTEGDYYCKCRFPRRGDGKINGKGCHLPKYMVPTRRKRRMFANNNGGRLLKDMNIVLFTEKDLNKMTKNRSTKILGEGSFGKVYMGTHKNQLVAVKYSKGKRKAARMHGVDIKCMNQNVFQNAFCWSKVPSPEDSSSPLPESMDEIRVQSLIQHENVVTLVGCCIETEEPTLILEFIPNGSLEKMLHGGDQRPLSLLQRLDIAIGSAKALSYMHSSTLVHGDVKLSNILLDDKLIPKVSDFGSAELTLKIKLVCGDLDYIDPVFLQTHNFTMKSDVYSYGVVLLELITRKRAKYDDGRSLPVEFVKHYKDNNERRKMYDQDMLSSMDALLQPYCTECLDRIAPLRSDVSKTRWRRDQPWRRWSRSLSS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_11g0024040 | OsCMeo_11g0024040.02 | Chr11 | 27974290 | 27979190 | + | IsoSeq | ||
| CDS seq | atgccactaacggggacgggtatctctgcaagtgctccaagggatacgacggcaatccctatctcaaagccggcaatggcggatgcacagatattgatgaatgcaaggaaccagatcgttgttctactggcagcagatgccataacacagagggtgattattattgcaaatgccgttttccacgtagaggggatggcaaaattaatggcaaaggatgccaccttcccaaatatatggtccccacggttgcgacggtgtgca
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| Protein seq | MPLTGTGISASAPRDTTAIPISKPAMADAQILMNARNQIVVLLAADAITQRVIIIANAVFHVEGMAKLMAKDATFPNIWSPRLRRCA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr11 | 27974891 | 27976898 | + | OsCMeo_11g0024040.02 | OsCMeo_11g0024040.01,OsCMeo_11g0024040.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 29.071442 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0691300 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g46880 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0691300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024580 | SBH | 0.0 | 24.940462 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0024490 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0024010 | RBH | 0.0 | 0.000000 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023830 | SBH | 0.0 | 0.193654 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0024350 | SBH | 0.0 | 0.0 | 0.529382 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0443700 | SBH | 0.0665605 | 0.0833025 | 0.0615995 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024660 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0441700 | SBH | 0.044294 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024620 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0024840 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0024350 | SBH | 0.0 | 79.943008 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023810 | SBH | 2.759746 | 0.0 | 0.221914 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0024250 | SBH | 0.0 | 51.140400 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G024250 | SBH | 0.0 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0024470 | SBH | 0.0 | 1.171621 | 0.0 |
