Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_11g0569500 | OGI:11010520 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr11:21250919-21255602 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | AACGATCACAAATTACAAAGTTGCGTAGTAATTTATTATGTCTGGACAAAGTACATGACTGGAAAAATGCTTTTCCTAGCAAAAAAGACATAAATCACGGATATGTTTACAGGCATGATTACAACTGCATGGCAATCAGTTTTTGCGCTCAGATGTCCAAATCCCAAGTGATAACAGTATACTTCAGTGTACTATGCATAAACCAACAAGGTATGAAAGGGTAAGAGATGAACACCCAAGGAATGAACTCCAAACTGTCATTCAGCTCGAAGATATATTATGTGTTCCCTACAAGGATTGTTTGATTGAACTCAATTCCTTAATAATATCTCCAGTTAACATTCTATTCGACGGCATTTCCTGAGAGCAATACAATCCAAGCCTGAGTAATGCGACCAGGCAATTGATCCTTCCTTTGCATGAAGAATCGTCAGCGGTTTGAAATTCATTCTCAAGGCCCAAGAACAGCTGGGTGTCAACAACATCCATCATTTTACCATGTAGACCCAGCTCAACATACTCACGGAGGCTCAATCCTTGTATGGATTTGTTATCGATGGGCCTCTTCCCAGTTACCATTTCTAACACAAGAATTCCATAGCTGTAAATATCTCCTAAAGTTGATACCGTATTTCCAGCACCATACTCTGTTTAATCAAAGTTTGCCAAAAAAAAAGTTACGATTTTTATAGCGCTTGTAATCCAAAATGTAACAGATTCATAATAACTATAGCTGCTTCACATAAATCAAACTTCTTTTGCAACTTCCCAAAAAGTTTGTCTAGCTGTACATTTTATTAATAAAAGCACTAGGCAGGACTAAATAAGAAAGGAGGACAGGAAAAATAAAAGGCTAACCTGGAGGAGCATAGCCGATTGTCCCTCTAAATCCCATTGAGCTTGTAGACTGTTGGAGCAATGAGTTGCCCTCAACAAGAATCTTCGCAAGTCCAAAGTCTCCAAGATGTGCTACCATCTCAGCATCTAAAAGCACGTTGCTTGGTTTCAGATCACAATGTACAACAGGTGTTGGTCCATGGCAATGTAGATAATCCAGCGCATTAGCCACATCAAGTAGTATGCCAACTCTCTCAAGAAGATTCAAGTATTTGTGATCAATCTGGTCATCTTTGTCAGGATGTAACCAGCCTTCTAAACTGCCATTGGGCATAAAGTCGAAAACAATTGCTTTGAAGTCATTGCCGCTGTTATCAATGCTTGAGCAGGCTGTAATTATCTTCACGAGATTTCGGTGCCGTAGGTTTCGCAGTGCATTGCATTCAGCGGCAAAACTCTTAAGCGCACCAGAAGTCTGAAGTTTTAGTACCTTCACAGCAACATAATATGGGCTTTCACCAATTTGAGCAACTAGCTCTCCTTTGTACACAGAACCAAATGAACCAGAACCTAACAAATTGGCTATGGAAAATTCATCTGTTGCTTTTACCAACTGGGAATAAGAAACCAGAGGATGGCCTCGCATGGATGTAGTTGAAGGGATTTCTGTTTGGATCTTCTTGTGCCAAGCAAAAAGTATGTATAGCAATGAGAGGACGGCTAGTGTTGCAACAAGAGAAATAACAATAGGAATTACTACAGGTTTATGTTTATTCTTTGGTAATTGGGAAGAACATGGAGGTAAATGTAGAGTAGTTATTCCCCCGCAAAGTCTTCCATTGTGTTGGATTGAGATTGCAGTAGAATTTGTAAATATACCAGTAGTTGGCACTTCTCCGGTAAATATATTGAATGAAAGGTTGAGATAAGAGAGCATGGTAAAGTTCTCTATAAATATGGGGATTTCACCTGACAAATTATTTCTGGAGAAATCAAGAGTTTGTAGACTTTTTAGTTGACTCAATTGTTCTGGGATATTACCATTTAACATGTTGTTTTGGAGAGTGAGATCCTGGAGATTCTGGCATTGTCCAAGGGTGCTAGGGATCTCACCTGATAATTTATTTGACTCTGCATTAAATTTTACAAGATTTACGAGATTCCCTATTTCTTGTGGTATTGACCCCTCAAATTTGTTATAGGATAGCTCCAAAGCTATAGAAAGTGTGGTGATGTTGAACAAGCCACTAGGAATTGGGCCTATGAAGTTATTACTAGAAAGATCCAGTTCTGTCAACTTTGTCAGGTTTGCAAGTGAGTTTGTTAACCTACCACTAAAGGTGTTTGACATCAAATACAACGTAATTAACTCTGTGAGATTTCCTATTGTCGATGGGATTGGTCCACCAAGATCATTGTTGTATACGTTAAAATAGTGCAAGTTTTTAAGCCTACCAAGGGATGAAGGAAGAGTTCCGATGAAAGAGTTCCAAGCGAGGTCAAGGACTTGTAGGTTGAAGAGATTACCAATATCCTTAGGTATGCTTCCCAAAATATTGTTATATGAAAGAGAGAGATATTTTAGCGACGTGCTAAGACTGGAAAGTGAATTAGGAAGAACCCCACCAAACTCACACATACCCAATACCAAAACCTGTAACTGGGAGCAATTAGCTAATGCTGTTATGAACTCCCAATCTTTTTGTTCTTTCGCTCCAACTAAAGTTTGTGTCAGTACAAGTTGTTCTAACTTTCTTAGTCTTCCAATCTCTTGGGGAACAATGCCGTTGAAAAGGTTAGCGCCAAGGATAATCATTGACAGATTGGAAGAATTACCCAGCGAGACAGGAATCTTACCATGGAGGTGGTTGTGGTCCATGTATAATTCCTCGAGATGTGGAAGAGTTTCAAATGCATTAGCAGGTATGGTTCCACTTAGCATATTTCCTTGGACAGAAAGCGCCCTCAAAGATGAAATGTTCCAAATAGAAGTTGGGATTGGTCCAGATAAATTGTTAAAACCTAAGCTGAGCTCATATAAATTGGGCAACATGCCTAAAGATGAAGGGATGACTCCTGAAAGCATGTTATTGGAGAAACGAATATTCAAGAGGTTTGTGAGATTGCTCAAAGCAGATGGTACCTCTCCAGATAATTTATTGTGCGACAAAGATAACAGTTCCAGCGATGGTAACTCGGCCAGAGATTGAGGGATCTCTCCCGACAAAAGATTTCTGGTAAGATATAAATTGATGAGATTTTTCAAGCTGGAACCTATCTCAGCTGGGATCTCACCTTGAAGCTGGTTATTGCCTAGGTGAAGGGTCATGAGCTTGGTGCATCCTCTCATCTCCACAGGAATGCTTCCTCGGAGCAAATTTGTGCTCAGATTCAGCATCCGAAGCTTGCTGAGGTGACCAAGCTCCGAAGGTATCTGCCCGACAAGCTGGTTGTTGCCAAGGTCCAGTGTCTTGAGAAAGGATAGGTTGCCCAAGAACGGCGATATGCGCCCAGACAGGCCGCAAGAGTTCATTTGCAGCGCAATGACCTTCTCAGGTTGCTGACGGCTGCAACTAACTCCTGTCCAGCTGCAGAAGTGGCTGGATGAGTTCCATGATGCCATCAAACCCAAGGATGGGCTTGATAGCATGGACTTGAAGGACAGGAGGGCGAGCTCATCGGCTGTGGCATTGCTGCTGCTGCTGCTCCCAGCAGAGACCAAGGCCAGAGCATAGGAACAGAAGAGCAACAACATCATTGCCCGCGCCATGACGACTGTGGCTAGATGGAAAGTTCATTCTTCATACCGTTCCAACTTATATGCAAGCTAATTTCTAAGAATTTGGGGGTGGGAATGCACATGGTGGTAGCTGAGAGGTTCGTTCCACATGGAAAAGAAATGTTCATCTTGGCACATGGAATCCAGCTGCACTCTTTCGCACAAACTAGTACCTTTATCAGGGTCCATCCATCCAGAATATGGACATGCCTTGCAAGTTGCATACACGGATACATCATACACCTTACCATTAGGGATGCAAGTGGGTAGTCCCGCTACCCACATAAAAACCTGCTTGCTAGTCTATTTTTCGCATGGTAGTACAAAATTTAAAAGAAAAAATGAATTAGAAGTGGGATAAGCGGGATAAACAAGCCCGCTTGCCCGTCCCGCTTGCATCCCTACTTACCATGACCAGCAAGCCTATCTCCAGACAATCAGACAATAATCGATGGTGACTACTGACTAGGTTCTTCACCAATTCCACACGGCTGTGCCCGGATTTCATGCAGCCTCTCCTCCTATTACTACCAAGATCACCTAAAACTCAGCACACAATATACTACTATATGATTAATCTTTTGCGTGGTAAGACTTTCTGAGTAGCCAAGAATTGCGATTTGCAAAGGCAATCGAAAGAAAACAAAATATAAATTTCTATACAGGTCTAAAACTTTGAGCCCAGCCGCAAGAACTGCAAGACAAATGAAAAGGACAAATTGTTGCAGTTGAAATGTTTGGGGCTTCTAGATCGGTCTCAAGAACGCACCTAGGATTTCTTCGGAGCCCATAGCATTGGAGATTTCACTTCAGGTTCAGGGCGCCGCGCTCTCGCCGGACAGCGTCCGTCAGGACGTTGCCGGTTGCCCCGCCCAACTCTGCGTCGGCGGCCGCCTCGCCTCCTGCGCTCCTCCTCCGCGGCGGGGGCCCCGCTTCTATGGTGGTGGTAAATGCTCCGGTGAGCCTGCCTCCCCCACCACCGGCCTACACCGGCGGCGCGCCGGCGCCAGGGGCATCTCACTCACGAGGAATCCGATGAAAGCGACGGGGAAAGAAAGAATGAAAGAA
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| CDS seq | ATGGCGCGGGCAATGATGTTGTTGCTCTTCTGTTCCTATGCTCTGGCCTTGGTCTCTGCTGGGAGCAGCAGCAGCAGCAATGCCACAGCCGATGAGCTCGCCCTCCTGTCCTTCAAGTCCATGCTATCAAGCCCATCCTTGGGTTTGATGGCATCATGGAACTCATCCAGCCACTTCTGCAGCTGGACAGGAGTTAGTTGCAGCCGTCAGCAACCTGAGAAGGTCATTGCGCTGCAAATGAACTCTTGCGGCCTGTCTGGGCGCATATCGCCGTTCTTGGGCAACCTATCCTTTCTCAAGACACTGGACCTTGGCAACAACCAGCTTGTCGGGCAGATACCTTCGGAGCTTGGTCACCTCAGCAAGCTTCGGATGCTGAATCTGAGCACAAATTTGCTCCGAGGAAGCATTCCTGTGGAGATGAGAGGATGCACCAAGCTCATGACCCTTCACCTAGGCAATAACCAGCTTCAAGGTGAGATCCCAGCTGAGATAGGTTCCAGCTTGAAAAATCTCATCAATTTATATCTTACCAGAAATCTTTTGTCGGGAGAGATCCCTCAATCTCTGGCCGAGTTACCATCGCTGGAACTGTTATCTTTGTCGCACAATAAATTATCTGGAGAGGTACCATCTGCTTTGAGCAATCTCACAAACCTCTTGAATATTCGTTTCTCCAATAACATGCTTTCAGGAGTCATCCCTTCATCTTTAGGCATGTTGCCCAATTTATATGAGCTCAGCTTAGGTTTTAACAATTTATCTGGACCAATCCCAACTTCTATTTGGAACATTTCATCTTTGAGGGCGCTTTCTGTCCAAGGAAATATGCTAAGTGGAACCATACCTGCTAATGCATTTGAAACTCTTCCACATCTCGAGGAATTATACATGGACCACAACCACCTCCATGGTAAGATTCCTGTCTCGCTGGGTAATTCTTCCAATCTGTCAATGATTATCCTTGGCGCTAACCTTTTCAACGGCATTGTTCCCCAAGAGATTGGAAGACTAAGAAAGTTAGAACAACTTGTACTGACACAAACTTTAGTTGGAGCGAAAGAACAAAAAGATTGGGAGTTCATAACAGCATTAGCTAATTGCTCCCAGTTACAGGTTTTGGTATTGGGTATGTGTGAGTTTGGTGGGGTTCTTCCTAATTCACTTTCCAGTCTTAGCACGTCGCTAAAATATCTCTCTCTTTCATATAACAATATTTTGGGAAGCATACCTAAGGATATTGGTAATCTCTTCAACCTACAAGTCCTTGACCTCGCTTGGAACTCTTTCATCGGAACTCTTCCTTCATCCCTTGGTAGGCTTAAAAACTTGCACTATTTTAACGTATACAACAATGATCTTGGTGGACCAATCCCATCGACAATAGGAAATCTCACAGAGTTAATTACGTTGTATTTGATGTCAAACACCTTTAGTGGTAGGTTAACAAACTCACTTGCAAACCTGACAAAGTTGACAGAACTGGATCTTTCTAGTAATAACTTCATAGGCCCAATTCCTAGTGGCTTGTTCAACATCACCACACTTTCTATAGCTTTGGAGCTATCCTATAACAAATTTGAGGGGTCAATACCACAAGAAATAGGGAATCTCGTAAATCTTGTAAAATTTAATGCAGAGTCAAATAAATTATCAGGTGAGATCCCTAGCACCCTTGGACAATGCCAGAATCTCCAGGATCTCACTCTCCAAAACAACATGTTAAATGGTAATATCCCAGAACAATTGAGTCAACTAAAAAGTCTACAAACTCTTGATTTCTCCAGAAATAATTTGTCAGGTGAAATCCCCATATTTATAGAGAACTTTACCATGCTCTCTTATCTCAACCTTTCATTCAATATATTTACCGGAGAAGTGCCAACTACTGGTATATTTACAAATTCTACTGCAATCTCAATCCAACACAATGGAAGACTTTGCGGGGGAATAACTACTCTACATTTACCTCCATGTTCTTCCCAATTACCAAAGAATAAACATAAACCTGTAGTAATTCCTATTGTTATTTCTCTTGTTGCAACACTAGCCGTCCTCTCATTGCTATACATACTTTTTGCTTGGCACAAGAAGATCCAAACAGAAATCCCTTCAACTACATCCATGCGAGGCCATCCTCTGGTTTCTTATTCCCAGTTGGTAAAAGCAACAGATGAATTTTCCATAGCCAATTTGTTAGGTTCTGGTTCATTTGGTTCTGTGTACAAAGGAGAGCTAGTTGCTCAAATTGGTGAAAGCCCATATTATGTTGCTGTGAAGGTACTAAAACTTCAGACTTCTGGTGCGCTTAAGAGTTTTGCCGCTGAATGCAATGCACTGCGAAACCTACGGCACCGAAATCTCGTGAAGATAATTACAGCCTGCTCAAGCATTGATAACAGCGGCAATGACTTCAAAGCAATTGTTTTCGACTTTATGCCCAATGGCAGTTTAGAAGGCTGGTTACATCCTGACAAAGATGACCAGATTGATCACAAATACTTGAATCTTCTTGAGAGAGTTGGCATACTACTTGATGTGGCTAATGCGCTGGATTATCTACATTGCCATGGACCAACACCTGTTGTACATTGTGATCTGAAACCAAGCAACGTGCTTTTAGATGCTGAGATGGTAGCACATCTTGGAGACTTTGGACTTGCGAAGATTCTTGTTGAGGGCAACTCATTGCTCCAACAGTCTACAAGCTCAATGGGATTTAGAGGGACAATCGGCTATGCTCCTCCAGAGTATGGTGCTGGAAATACGGTATCAACTTTAGGAGATATTTACAGCTATGGAATTCTTGTGTTAGAAATGGTAACTGGGAAGAGGCCCATCGATAACAAATCCATACAAGGATTGAGCCTCCGTGAGTATGTTGAGCTGGGTCTACATGGTAAAATGATGGATGTTGTTGACACCCAGCTGTTCTTGGGCCTTGAGAATGAATTTCAAACCGCTGACGATTCTTCATGCAAAGGAAGGATCAATTGCCTGGTCGCATTACTCAGGCTTGGATTGTATTGCTCTCAGGAAATGCCGTCGAATAGAATGTTAACTGGAGATATTATTAAGGAATTGAGTTCAATCAAACAATCCTTGTAG
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| Protein seq | MARAMMLLLFCSYALALVSAGSSSSSNATADELALLSFKSMLSSPSLGLMASWNSSSHFCSWTGVSCSRQQPEKVIALQMNSCGLSGRISPFLGNLSFLKTLDLGNNQLVGQIPSELGHLSKLRMLNLSTNLLRGSIPVEMRGCTKLMTLHLGNNQLQGEIPAEIGSSLKNLINLYLTRNLLSGEIPQSLAELPSLELLSLSHNKLSGEVPSALSNLTNLLNIRFSNNMLSGVIPSSLGMLPNLYELSLGFNNLSGPIPTSIWNISSLRALSVQGNMLSGTIPANAFETLPHLEELYMDHNHLHGKIPVSLGNSSNLSMIILGANLFNGIVPQEIGRLRKLEQLVLTQTLVGAKEQKDWEFITALANCSQLQVLVLGMCEFGGVLPNSLSSLSTSLKYLSLSYNNILGSIPKDIGNLFNLQVLDLAWNSFIGTLPSSLGRLKNLHYFNVYNNDLGGPIPSTIGNLTELITLYLMSNTFSGRLTNSLANLTKLTELDLSSNNFIGPIPSGLFNITTLSIALELSYNKFEGSIPQEIGNLVNLVKFNAESNKLSGEIPSTLGQCQNLQDLTLQNNMLNGNIPEQLSQLKSLQTLDFSRNNLSGEIPIFIENFTMLSYLNLSFNIFTGEVPTTGIFTNSTAISIQHNGRLCGGITTLHLPPCSSQLPKNKHKPVVIPIVISLVATLAVLSLLYILFAWHKKIQTEIPSTTSMRGHPLVSYSQLVKATDEFSIANLLGSGSFGSVYKGELVAQIGESPYYVAVKVLKLQTSGALKSFAAECNALRNLRHRNLVKIITACSSIDNSGNDFKAIVFDFMPNGSLEGWLHPDKDDQIDHKYLNLLERVGILLDVANALDYLHCHGPTPVVHCDLKPSNVLLDAEMVAHLGDFGLAKILVEGNSLLQQSTSSMGFRGTIGYAPPEYGAGNTVSTLGDIYSYGILVLEMVTGKRPIDNKSIQGLSLREYVELGLHGKMMDVVDTQLFLGLENEFQTADDSSCKGRINCLVALLRLGLYCSQEMPSNRMLTGDIIKELSSIKQSL |
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| Function | Receptor kinase-like protein Xa21 [UniProtKB/Swiss-Prot:Q1MX30] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_11g0569500 | OsNip_11t0569500-01 | Chr11 | 21250919 | 21254683 | - | RAP2018-11-26 | ||
| CDS seq | ATGGCGCGGGCAATGATGTTGTTGCTCTTCTGTTCCTATGCTCTGGCCTTGGTCTCTGCTGGGAGCAGCAGCAGCAGCAATGCCACAGCCGATGAGCTCGCCCTCCTGTCCTTCAAGTCCATGCTATCAAGCCCATCCTTGGGTTTGATGGCATCATGGAACTCATCCAGCCACTTCTGCAGCTGGACAGGAGTTAGTTGCAGCCGTCAGCAACCTGAGAAGGTCATTGCGCTGCAAATGAACTCTTGCGGCCTGTCTGGGCGCATATCGCCGTTCTTGGGCAACCTATCCTTTCTCAAGACACTGGACCTTGGCAACAACCAGCTTGTCGGGCAGATACCTTCGGAGCTTGGTCACCTCAGCAAGCTTCGGATGCTGAATCTGAGCACAAATTTGCTCCGAGGAAGCATTCCTGTGGAGATGAGAGGATGCACCAAGCTCATGACCCTTCACCTAGGCAATAACCAGCTTCAAGGTGAGATCCCAGCTGAGATAGGTTCCAGCTTGAAAAATCTCATCAATTTATATCTTACCAGAAATCTTTTGTCGGGAGAGATCCCTCAATCTCTGGCCGAGTTACCATCGCTGGAACTGTTATCTTTGTCGCACAATAAATTATCTGGAGAGGTACCATCTGCTTTGAGCAATCTCACAAACCTCTTGAATATTCGTTTCTCCAATAACATGCTTTCAGGAGTCATCCCTTCATCTTTAGGCATGTTGCCCAATTTATATGAGCTCAGCTTAGGTTTTAACAATTTATCTGGACCAATCCCAACTTCTATTTGGAACATTTCATCTTTGAGGGCGCTTTCTGTCCAAGGAAATATGCTAAGTGGAACCATACCTGCTAATGCATTTGAAACTCTTCCACATCTCGAGGAATTATACATGGACCACAACCACCTCCATGGTAAGATTCCTGTCTCGCTGGGTAATTCTTCCAATCTGTCAATGATTATCCTTGGCGCTAACCTTTTCAACGGCATTGTTCCCCAAGAGATTGGAAGACTAAGAAAGTTAGAACAACTTGTACTGACACAAACTTTAGTTGGAGCGAAAGAACAAAAAGATTGGGAGTTCATAACAGCATTAGCTAATTGCTCCCAGTTACAGGTTTTGGTATTGGGTATGTGTGAGTTTGGTGGGGTTCTTCCTAATTCACTTTCCAGTCTTAGCACGTCGCTAAAATATCTCTCTCTTTCATATAACAATATTTTGGGAAGCATACCTAAGGATATTGGTAATCTCTTCAACCTACAAGTCCTTGACCTCGCTTGGAACTCTTTCATCGGAACTCTTCCTTCATCCCTTGGTAGGCTTAAAAACTTGCACTATTTTAACGTATACAACAATGATCTTGGTGGACCAATCCCATCGACAATAGGAAATCTCACAGAGTTAATTACGTTGTATTTGATGTCAAACACCTTTAGTGGTAGGTTAACAAACTCACTTGCAAACCTGACAAAGTTGACAGAACTGGATCTTTCTAGTAATAACTTCATAGGCCCAATTCCTAGTGGCTTGTTCAACATCACCACACTTTCTATAGCTTTGGAGCTATCCTATAACAAATTTGAGGGGTCAATACCACAAGAAATAGGGAATCTCGTAAATCTTGTAAAATTTAATGCAGAGTCAAATAAATTATCAGGTGAGATCCCTAGCACCCTTGGACAATGCCAGAATCTCCAGGATCTCACTCTCCAAAACAACATGTTAAATGGTAATATCCCAGAACAATTGAGTCAACTAAAAAGTCTACAAACTCTTGATTTCTCCAGAAATAATTTGTCAGGTGAAATCCCCATATTTATAGAGAACTTTACCATGCTCTCTTATCTCAACCTTTCATTCAATATATTTACCGGAGAAGTGCCAACTACTGGTATATTTACAAATTCTACTGCAATCTCAATCCAACACAATGGAAGACTTTGCGGGGGAATAACTACTCTACATTTACCTCCATGTTCTTCCCAATTACCAAAGAATAAACATAAACCTGTAGTAATTCCTATTGTTATTTCTCTTGTTGCAACACTAGCCGTCCTCTCATTGCTATACATACTTTTTGCTTGGCACAAGAAGATCCAAACAGAAATCCCTTCAACTACATCCATGCGAGGCCATCCTCTGGTTTCTTATTCCCAGTTGGTAAAAGCAACAGATGAATTTTCCATAGCCAATTTGTTAGGTTCTGGTTCATTTGGTTCTGTGTACAAAGGAGAGCTAGTTGCTCAAATTGGTGAAAGCCCATATTATGTTGCTGTGAAGGTACTAAAACTTCAGACTTCTGGTGCGCTTAAGAGTTTTGCCGCTGAATGCAATGCACTGCGAAACCTACGGCACCGAAATCTCGTGAAGATAATTACAGCCTGCTCAAGCATTGATAACAGCGGCAATGACTTCAAAGCAATTGTTTTCGACTTTATGCCCAATGGCAGTTTAGAAGGCTGGTTACATCCTGACAAAGATGACCAGATTGATCACAAATACTTGAATCTTCTTGAGAGAGTTGGCATACTACTTGATGTGGCTAATGCGCTGGATTATCTACATTGCCATGGACCAACACCTGTTGTACATTGTGATCTGAAACCAAGCAACGTGCTTTTAGATGCTGAGATGGTAGCACATCTTGGAGACTTTGGACTTGCGAAGATTCTTGTTGAGGGCAACTCATTGCTCCAACAGTCTACAAGCTCAATGGGATTTAGAGGGACAATCGGCTATGCTCCTCCAGAGTATGGTGCTGGAAATACGGTATCAACTTTAGGAGATATTTACAGCTATGGAATTCTTGTGTTAGAAATGGTAACTGGGAAGAGGCCCATCGATAACAAATCCATACAAGGATTGAGCCTCCGTGAGTATGTTGAGCTGGGTCTACATGGTAAAATGATGGATGTTGTTGACACCCAGCTGTTCTTGGGCCTTGAGAATGAATTTCAAACCGCTGACGATTCTTCATGCAAAGGAAGGATCAATTGCCTGGTCGCATTACTCAGGCTTGGATTGTATTGCTCTCAGGAAATGCCGTCGAATAGAATGTTAACTGGAGATATTATTAAGGAATTGAGTTCAATCAAACAATCCTTGTAG
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| Protein seq | MARAMMLLLFCSYALALVSAGSSSSSNATADELALLSFKSMLSSPSLGLMASWNSSSHFCSWTGVSCSRQQPEKVIALQMNSCGLSGRISPFLGNLSFLKTLDLGNNQLVGQIPSELGHLSKLRMLNLSTNLLRGSIPVEMRGCTKLMTLHLGNNQLQGEIPAEIGSSLKNLINLYLTRNLLSGEIPQSLAELPSLELLSLSHNKLSGEVPSALSNLTNLLNIRFSNNMLSGVIPSSLGMLPNLYELSLGFNNLSGPIPTSIWNISSLRALSVQGNMLSGTIPANAFETLPHLEELYMDHNHLHGKIPVSLGNSSNLSMIILGANLFNGIVPQEIGRLRKLEQLVLTQTLVGAKEQKDWEFITALANCSQLQVLVLGMCEFGGVLPNSLSSLSTSLKYLSLSYNNILGSIPKDIGNLFNLQVLDLAWNSFIGTLPSSLGRLKNLHYFNVYNNDLGGPIPSTIGNLTELITLYLMSNTFSGRLTNSLANLTKLTELDLSSNNFIGPIPSGLFNITTLSIALELSYNKFEGSIPQEIGNLVNLVKFNAESNKLSGEIPSTLGQCQNLQDLTLQNNMLNGNIPEQLSQLKSLQTLDFSRNNLSGEIPIFIENFTMLSYLNLSFNIFTGEVPTTGIFTNSTAISIQHNGRLCGGITTLHLPPCSSQLPKNKHKPVVIPIVISLVATLAVLSLLYILFAWHKKIQTEIPSTTSMRGHPLVSYSQLVKATDEFSIANLLGSGSFGSVYKGELVAQIGESPYYVAVKVLKLQTSGALKSFAAECNALRNLRHRNLVKIITACSSIDNSGNDFKAIVFDFMPNGSLEGWLHPDKDDQIDHKYLNLLERVGILLDVANALDYLHCHGPTPVVHCDLKPSNVLLDAEMVAHLGDFGLAKILVEGNSLLQQSTSSMGFRGTIGYAPPEYGAGNTVSTLGDIYSYGILVLEMVTGKRPIDNKSIQGLSLREYVELGLHGKMMDVVDTQLFLGLENEFQTADDSSCKGRINCLVALLRLGLYCSQEMPSNRMLTGDIIKELSSIKQSL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_11g0569500 | OsNip_11t0569500-02 | Chr11 | 21250932 | 21255602 | - | IsoSeq | ||
| CDS seq | ATGTTGTTGACACCCAGCTGTTCTTGGGCCTTGAGAATGAATTTCAAACCGCTGACGATTCTTCATGCAAAGGAAGGATCAATTGCCTGGTCGCATTACTCAGGCTTGGATTGTATTGCTCTCAGGAAATGCCGTCGAATAGAA |
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| Protein seq | MLLTPSCSWALRMNFKPLTILHAKEGSIAWSHYSGLDCIALRKCRRIE |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.140432 | 1.323186 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g36150 | RBH | 0.0 | 0.092781 | 0.339087 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0569500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0017830 | SBH | 0.128877 | 6.788608 | 1.696541 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0017970 | RBH | 0.313666 | 0.0 | 0.250769 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0017770 | SBH | 0.164332 | 9.540369 | 4.595458 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0017400 | RBH | 0.000000 | 0.133228 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0017810 | RBH | 0.954121 | 0.0 | 1.531730 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0331700 | RBH | 1.8375725 | 7.439747 | 4.6126405 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0018270 | SBH | 0.040696 | 0.0 | 0.079613 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0344100 | RBH | 1.287871 | 12.7846285 | 1.149585 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0018080 | SBH | 0.068635 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0018210 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0017710 | SBH | 0.429796 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0017520 | SBH | 0.350358 | 0.0 | 0.366629 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0017660 | SBH | 0.123759 | 0.667272 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G017780 | SBH | 0.0 | 0.712022 | 0.345214 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0018010 | SBH | 0.080130 | 5.532844 | 0.000000 |
