Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_07g0027180 | OGI:07078280 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr07:27984011-27984933 | ||||||||
| Gene Symbol | prx109, POX-2, POX22.3, POX22.3, OSPER, OsPOX, POX, Pir3, prx111, POX22, OsPOX1, POX1, OsPOX22.3, OsPR9, PR9, POXGX9, POXgX9, OsPOXgX9, prx112, POX5.1, POX5.1, prx113, POX5, POX3006, POX3006, prx114, Osprx114, PO-C1, POC-1, POC1, OsPOC1, Prx14, OsPrx14 | ||||||||||
| DNA seq | gggtgggccgtcatggagggttcttctcgggaggcgtgactcgacgacggcgagcttggcgctggcgaacagcgacctgccacctccgtccttcgacgtcgccaacctcaccgccgcgttcgccgccaaggggctgagccaagccgacatggtggcgctctccggcgcgcacacggtcgggcaggcgcagtgccagaacttccgcgacaggctctacaacgagaccaacatcgacgccgccttcgcggcggcgctcaaggccagctgcccgcggccgacgggcagcggcgacggcaacctggcgccgctggacacgacgacgcccaccgcgttcgacaacgcctactacaccaacctgctgtcgaacaaggggctcctgcactccgaccaggtgctcttcaacggcggcgccgtcgacggccaggtccggtcgtacgcgtccgggccgtcgaggttcagaagggacttcgcggcggccatggtgaagatggggaacatcgccccgttgacgggaacgcagggacaaatcaggctcgtctgctccaaggtgaattaattagcggtgatcatcaacgaaaattctgagtgcatgaggggacaataataaggctatatatgccactgaaatcgatatttgtgctttgcactgatcagtgatcatgttcacgctttcttggatcaaattgtgtccgagaaagtggcgtgtttgcaagaatttgatcgtgtacactgaattctgaagagccctcatgcaaatgcccgcgagattaactcccttgcctaaatatgtccttgtgctcggttacttctttgcaaaacgctgcatggttggaatatttcactgagctccccatatattgtacatattgcttaaaacgttattataaaaaaagaagtgctaaaaatttggcgacagttttttt
More
|
||||||||||
| CDS seq | atggtggcgctctccggcgcgcacacggtcgggcaggcgcagtgccagaacttccgcgacaggctctacaacgagaccaacatcgacgccgccttcgcggcggcgctcaaggccagctgcccgcggccgacgggcagcggcgacggcaacctggcgccgctggacacgacgacgcccaccgcgttcgacaacgcctactacaccaacctgctgtcgaacaaggggctcctgcactccgaccaggtgctcttcaacggcggcgccgtcgacggccaggtccggtcgtacgcgtccgggccgtcgaggttcagaagggacttcgcggcggccatggtgaagatggggaacatcgccccgttgacgggaacgcagggacaaatcaggctcgtctgctccaaggtgaat
More
|
||||||||||
| Protein seq | MVALSGAHTVGQAQCQNFRDRLYNETNIDAAFAAALKASCPRPTGSGDGNLAPLDTTTPTAFDNAYYTNLLSNKGLLHSDQVLFNGGAVDGQVRSYASGPSRFRRDFAAAMVKMGNIAPLTGTQGQIRLVCSKVN |
||||||||||
| Function | Peroxidase 2 [UniProtKB/Swiss-Prot:Q0D3N0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_07g0027180 | OsNaBo_07g0027180.01 | Chr07 | 27984011 | 27984933 | + | NAM | ||
| CDS seq | atggtggcgctctccggcgcgcacacggtcgggcaggcgcagtgccagaacttccgcgacaggctctacaacgagaccaacatcgacgccgccttcgcggcggcgctcaaggccagctgcccgcggccgacgggcagcggcgacggcaacctggcgccgctggacacgacgacgcccaccgcgttcgacaacgcctactacaccaacctgctgtcgaacaaggggctcctgcactccgaccaggtgctcttcaacggcggcgccgtcgacggccaggtccggtcgtacgcgtccgggccgtcgaggttcagaagggacttcgcggcggccatggtgaagatggggaacatcgccccgttgacgggaacgcagggacaaatcaggctcgtctgctccaaggtgaat
More
|
|||||||
| Protein seq | MVALSGAHTVGQAQCQNFRDRLYNETNIDAAFAAALKASCPRPTGSGDGNLAPLDTTTPTAFDNAYYTNLLSNKGLLHSDQVLFNGGAVDGQVRSYASGPSRFRRDFAAAMVKMGNIAPLTGTQGQIRLVCSKVN |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.654701 | 156.280701 | 2.542739 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0676900 | RBH | 0.705209 | 0.000000 | 1.845380 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g47990 | RBH | 0.437273 | 0.000000 | 0.435053 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0676900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0027630 | RBH | 0.692229 | 27.330782 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0027650 | SBH | 0.000000 | 18.986893 | 0.229096 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0027460 | SBH | 4.093558 | 168.669250 | 0.170569 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0027220 | SBH | 2.096577 | 0.711689 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0027600 | RBH | 14.034740 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0467100 | RBH | 3.735664 | 10.843553 | 0.112144 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0028050 | RBH | 1.125385 | 0.019468 | 0.263139 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0481000 | RBH | 2.2265265 | 0.7525525 | 0.3815175 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0027330 | RBH | 0.221365 | 0.326599 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0027780 | RBH | 2.550790 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0027490 | RBH | 1.143427 | 197.966537 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0027820 | RBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0027390 | SBH | 2.384264 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G027450 | RBH | 1.549415 | 0.000000 | 0.206194 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0016640 | SBH | 0.0 | 0.000000 | 0.000000 |
