Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_07g0027490 | OGI:07078280 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr07:29219436-29229875 | ||||||||
| Gene Symbol | POX8.1, POX8.1, prx110, POX8, POX22.3, POX22.3, OSPER, OsPOX, POX, Pir3, prx111, POX22, OsPOX1, POX1, OsPOX22.3, OsPR9, PR9, POXGX9, POXgX9, OsPOXgX9, prx112, POX5.1, POX5.1, prx113, POX5 | ||||||||||
| DNA seq | atggcttcttctctgtcagtggccgtgctcctgtgcctcgccgccgccgccgcggcgcagctgtcgccgacgttctacgacacgtcgtgccccagggcgctggccaccatcAagagcgccgtgacggccgccgtgaacaacgagcctcgcatgggggcgtcactgctcaggctgcacttccatgactgctttgtccaagcaagtccctgatctcatcgatctcatggctaactttagctgcagtaattaataaatctatgttcagttttcgttttgcgtctgattgcaatgtgttcagaattagctaagttatgtgacactgtcaattcagttggactgacagaattactaacgtcaaaaggctagctttggactcgtcactgacactgatacgagattccatttccaagcttagctttgaccatctctagtttgactcaagtaaaaagagagagtaggagttgataacaattgactattagtactcgtaacaattattattattattattattattattattattattattattattattattactattattattattattattattattattattattattattattattattattttattttgcaactaggactgacaaagtagtagtaactgtcaatttatcaggggtgcgatgcgtccgtactgctggcggacacggccacgttcaccggcgagcagaatgctcttcctaacaagaattctctcagaggcttcaacgtcgtcgacagcatcaagacgcagctcgagggcatctgcagccagaccgtctcctgcgccgacatcctcgccgtcgccgcccgcgactccgtcgtcgcagtaagctagatcatcatcctcgccgccgcaccggccgcttgtgcgacatgaaactcacgacgattaattaaggaattaattaatttcttcttgtggttgcagctgggagggccgtcatggacggttggtctcgggaggagggactcaaccacggcgagcatggacagcgctaacaacgacctgcctcctcctttcttcgacctcgagaacctcatcaaggcgttcggcgacaagggtttcagtgtcaccgacatggttgctctctcaggtaaactgatcaatcgatcggtttctgaattttctgaagtcatagctcactctacatcgcgatatgacatgatggatgatgcaggtgcgcacacgatcgggcaggcgcagtgcaccaacttcaggggaaggatctacaacgagaccaacatcgacgccggctacgcggcgtcgctcagggccaactgcccgccgacggccggcaccggcgacagcaacctggcggcgctggacacgacgacgccctactccttcgacaccgcctactacagcaacctgctgtccaacaaggggctcctgcactccgaccaggtgctcttcaacggcaacagcacggacaacacggtcaggaacttcgcctccaacagggcggcgttcagcagcgccttctcgtcggccatggtgaagatggccaacctcggaccactcatcgggagccagggacagatcaggcttagctgctccaaagtgaactaataattaagtaaagaatcaaactggatacaaaagcaaacacaaatttgggaataaggctgggccatatatgtcacAGTagtagtattttactagtctgaaatgtttgctaagagtgttttctctgatcagcacaaagtgtttgaaacagatcaggaagcccatgttatgtaccgatcagtatggttttgaagttatcaaggaatgcatgaatgataatctctaactgtcccttgcttcaatatgtttggctgctaggggcattttagtttgatgccctcaatcttaatgacattcggatggccctttcttcggccatcctggccaaaaaataattaaaaaaggtttaacgcctatcaaaatactaatagtcacaaatgaagacacatgatagaaatagcacaattttcaatgtacaaggtgtatacatattacactgcaccatcctaggaaaatatacagtgaaaaccacctatttgatgaaaactatcgtataaaagtctttaagaaaatcacacatctagataagatgATattaaagaaccatataaaattgcacgaccaaattcaacttcgttcatgagatataaaattatcaaatgtctatgaaaaaacataattcctatttttttttgtcttgttcttcactacttttcattcatacaactcataaataaagtcgagtttggtcttgcaatattgtacaaaacctccgttttttaatagataacgccagtggctttttatcacacgtttgagcattcgcctttattttaaaaaaattatgttattataatttattttgttgtgagttgttttatcactcaaattactttaagcatgatttatatattatacatttgcataaaatttttgaataatacgaatggtcaaatatgtgttcaaaagttaacggcgtcatctattaaaaatgaggagtataattctcaaatatcatcttatctatatgtgtcaattttttttagattttcttgataatttttatgatgttacttacatagtttttaccgttgtgattttcaccgtatatttatccataaaccagagccgttgtgcctaagcatataggtcaaactagagatgatccagaataaagcctagacagttgaggcaacaactggtggtcattttccttggactgggagagcaaaatggttgcataacggtcagagcaagatagaattgtatttggacaaatgcggaccttttgtacgtaatcagtcatgatcatgatggacctacatgttgatgtccagctagctacacgaaaatgacgtgccattatatagctgctgttatatattactctattaattactccataattaatcatactcgcctactagcatggctctttccgatccagagcttatttaatttgtctgttctagctcatccatgatataatatgtagtatactataagtaaccaaaatgtatcaccaaacatacctagactagcaatttagtgtatcaaggaaaatttagcacgtctctgtaccttcagtcttcagtatcataagataccaaatttacactaaaatttaatatttcttgatatctattagggacgaaaatttctcgtctcgaatattaaaatatttggtacctctcaaaaactataaaatttcttgtcttcaatatcaccatatttagcgattaatcaactttttttaatcatccgcatattacactcgacgatgatttttttaaaaaaaatcttgtgggactttgtttatgttttgttgcaattttttatgttctacttatccaatataaaccttgtcactatttgtgtataactgcaagtgttggaagttatattttaagctaatgtcaagttatggctttcaattgaaaaacaacactaatatattctgattttgttgttgtatacatttaaatctcaaaagaaggccattgtaagatgtgcacatatatattcatgaacgccaaatttccgtataattctggctaataattttttctctaactaataattaaacggtactctccgtacgacaatcatatttcgtctttcacagtactgattgtatgtattatatagtgctatgtgtgcgtgtgcgtcttctgatgagcctagaaaggcaacttgccaaggggattgagccataatttgcgggatgcatatataatgtattccagcttatcatgccatggcgcaccaggaagaaaaatctgccgtccgacgcatgccgcctgtttatcttgaccaacaacagcacaatgggctaattaatcagcaaccattccgaatcatacatatatcatattcatgctgcaaatattgtatacgtccggagagagatgtatcgaacaggccctacactgaatgagtgatatacagagttggtgttggatgtagcaatttaagtctgacgctatcacaactgccggatgggggcatgtatgcagatgacgaaacttctattgttcaggttgaacgtcttgtacgtacgcttgtatgccaatgtggacaagttggacttGgtggtcacaaagtttggatgtttatatccctacaagagtggcatgcacgtggcagcgtacaaaatctctggctataaatatgcatgcaatgcagcaatctcttgcaagccacgacggccaagcagaaagtgcaattagcctgcaggcagctaatcagtagtagcttgctagccatggcttctgcaactaattcttcacttagcttaatgctgctggtggctgcagctatggcgtcagtggcatcggcgcagctctcggcgacgttctatgacacgtcgtgccccaatgcgttgtccaccatcaagagcgtcataacagccgccgtgaacagcgaggctcgcatgggggcgtcgctgctcaggctgcacttccacgactgcttcgtccaagcaagtttcacacaaccaattgtactaattttcatgaaattatagtatattttggacgagaaaataacagagaacatatatctaaaatcactgcaggggtgcgacgcgtcagttctgctgtccgggcaggagcagaatgctggcccgaacgtggggtcgctgaggggattcagcgtcatcgacaacgccaaggcgcgggtggaggccatctgcaaccagaccgtctcctgcgccgacatcctcgccgtcgccgcccgtgactccgtcgtcgcggtaagaatgtcacagcccttcgatcgcccgtgactttctttctGttgttctttcactgatagagctagctccctcttggtttgcagctgggagggccatcatggacggttctgttggggagaagggactccaccactgcaagcgaggccttggcaaataccgacctccctgccccttcctctagcctcgcagaacttatcggcaatttctccagaaagggactcgacgcaaccgacatggttgctctctcaggtaatccgatatggagtattatatacgagtatatatatagatagattaggataccatgtatatatgtgttgcagattttctgataagatgagagcgcgattaattatttcgcaggagcacacacgatcgggcaggcgcagtgccagaacttcagggacaggatctacaacgagaccaacatcgattccgccttcgcgacgcaacgccaggccaactgcccacggccgacgggcagcggcgacagcaacctggcggcgctggacacgacgacgcccaacgccttcgacaacgcctactacagcaacctgctgtcgaacaaggggctcctgcactccgaccaggtgctcttcaacggcggcagcgcggacaacacggtcaggaacttcgcgtccaacgcggcggcgttcagcagcgccttcacgacggccatggtgaagatggggaacatctcgccgctgaccgggacgcaggggcagatcaggctcagctgctccaaggtgaactcctaattaaggagtagtatgacgggatgcgttcgttgctggaagcaaatcgtgtcgacgacgacataaacgggccacaccacatatacccatatatgtagtataaccacaagtataggtacggtggtgttgtactagtacacgtaaagtatatggcagccagctcgctctagcaatccatcaagtgtatggagcagagcagccatggcattagcacctagtataccaaaataaaagctcctcatgcgaaggcatgcatggaggatcaatgaactgttaccttcacgcacatgtccgttcacaacttctccagacttttacggtacatcaagctcccttttttcaagtaaacaacactagatatgTtttttcattagatagagaaaaaataaatacaacccgcccctaggagcgaaaaaaagaagaagaaaaagcccgtatttacaaattatatactgataggtaataactctctaagtcattttgttcctgccatagtccaagtcttcttcctctatttttgctaggagggttattgtcatgctctccttgttagaaattttgttggttcctctccttccgtatctcctagacgacaaggagaattagggagcgcaatccccgctttggcataaatgtcgtgtttggcacacacattgataggggtggctaacaagccgactcggctcgactcgtaaaaactcattaagttaatgagctagcttggctcgactcattaacataacgagttaaaaatggaactcgactcgactcattaaaaagtccgagttgactcattaaacgtgttacaccgaaaaacatggtttgaaattcatatgcagtataatttgtgattctatgacaaaaattatgattggcgtgctatgtatcatgactcataagattgtactacaatgtataattatgagtatatgacttttacacctgtaaaatatgaacaattaacttctatcttagtgtatcatgagcttaacgagctaatcgagtaactcacgagctagctcgagttggctcgttaagtaaacgagtaaaagttcaaactcattaactactcgagttaagtcgagccgagccaagttttacacaagttgagctagctcatgagtttcgattttttttccaCccctgcacatcgagctctgtttcgctattgatgttggttgacacggtgaactttgactctttgagtatcaattatcaaacggtgtactcctaccgtcttacgtgccattgccatcccgcgcggccgcaccgtcccaaactcccaccgacgcaagcaagcgccgcccttccgcttgggccgttttacgcccgaatggtccgagacctacctattgggcctttggaccgtgtgacgccacatttcgctcgcagtgtctgtcagaccagggatggtggcccgtgggcgctgagcaggccggcctttcatttagttcgtgtcacctgtaggcggctaggccggagggaaactaacgtacccttttgttgttatttataactttatcgactataaattttgataagcaacaaatcaaacatgccataatcaattaggcaaaattaagtaatggaaaaattaggaaaaactaaagttatattccctcctcctcaaaaagaatacaattttagattttaaatttattccaacatataacgtactctatagtattgctttttcgtccaaccaccactcattcacccatatattactaacctagctactccaccattcccaactgtccctcatttgatgagtggtcgagtatttttcctatactatactagtttgtcttttaaatattacaattgtatttttcttttttagaattgaggtagtaaatttgtaaacaaagtgaacaggccaccaacctactaggtggaccactgtacacgataatattatttgtgctattgtgtttattttaatctaagttgcaaatcaagagagtattttatttcattcaaaaaggaataatttgtgaaacactcagcaactgtataatattagccgtgaaactcggttaaccataattttttttcaaaggaactatacgataatttaattattttactatccgcattttatggcttaagaaacaagagtaacatacggcacatgcaacaaccaccattctagctagagctagaaatgtcggcccaacttgtgatagctaattacgttcgattggaaaatcatatcaccaacatgcatggtttaatcatggcaacgctgatgcgaaagctctcgcagatctattattttttccctggagattgatcgaaaatgatggcacaacggtatgtaatgctataacagcatatattgtcttgtaacacaccgtttgcacttaaattagacaattagtccgaatgtacataagaagatgaattgcgatagaccattctagctcgtcacgagctgaatagttctcgcactattatacccgagatcaattagcagagtattaataaggtaaagttattttcataaactctgtacgacgatagtgcatacataccaatctttaacaaagggacaaattatcgacggcatttgtatgttcatgtgctattctatggcacgggtgctctttttttttggcttaagcaacgcgtgattaatggttaacagattaaggtcaagcgaaatggaccgaactgaccctacattgcatgaataatgcagagttgatgatgttggccgtaggccgtacgtagaaacttatgttggacacacatgtaagtactagtagtctagtagcactaataaagttaactaataaattatatatgatgtcactttaaaaaatacagattcaaattcgatatattgaagttgaacaaattaaattctagctagttagtatgcacacattcacactCatAtttgtttttgtgttgtaatttatagaagttAaaattcaacttgcaatttgttagtaaaaacataactatttagatgactagaaacatatccttctgttgtaatgtgccaggctcaTataagtagaaatatgctattagaaaattagagatagtactctgtgcgtggtgggaggagggatgaaaaaatgacgagttcgattttaaggtagtagagatatgtacaaagcaataggatattcctgttgagattaaaatccattcccctgcccagctcccctcgtatgattaatgtacctgcatatttcgtctcatctcggcaccaatcgatggcgtcaagcctgtagctaagctagctatataatatgcagcgtggcaccagcctctcttgcaagccacggccagcgaaaaagcttaaaaaaaactgcagttatttaggtaggattaagcatacgcgcacggcgcatcatatcgctcactctgcatggcttcggcttcttctgtcagcttaatgctgctcgttgctgcagctatggcctcagccgcctcggcgcagctgtcggcgacgttctacgacacgtcgtgcccaaacgcattgtccaccatcaagagcgcagtgacggccgccgtgaacagcgagccccgaatgggagcctcgctggtcaggctgcacttccacgactgcttcgtccaagcaagttttgatcacctaatctaatcagctgtacaagtagttctccttagactgtactttgagacaaggaaattaataacagaggatgtatctatggacttcactgatgatgcagggctgtgacgcgtctgttctgctgtccggccaggagcagaatgcaggcccgaacgctgggtcacttcggggattcaacgtcgtcgacaacatcaagacgcaggtcgaggccatctgcagccagaccgtctcctgcgccgacatcctcgccgtcgccgcccgtgactccgtcgtcgcggtaagatcacggatgagattactacatgatgcatatatttcttgtagactgtagtagtacgtactcctaatcgctcttggtttggtttggaatccttatatttgcagctcggagggccgtcgtggacggttctattgggaagaagggactccaccactgcgaacgaaagccaagcaaataccgacctccctgccccttcctctagcctcgctgaacttatcggcaatttctccagaaagggactcgacgtaaccgacatggttgctctctcaggtacatatatgtacacagattatatcagtgattgattctattacaaattttctgataagaatcataatacgatgagaacttgcaggcgcacacacgatcgggcaggcgcagtgccagaacttcagggacaggctctacaacgagacaaacatcgactccagcttcgcgacggcgctcaaggccaactgcccacggccgacgggcagcggcgacagcaacctggcgccgctggacacgacgacgcccaacgccttcgacagcgcctactacaccaacctgctgtccaacaagggcctcctgcactccgaccaggtgctcttcaacggcggcagcacggacaacacggtcaggaacttctcttccaacacggcggcgttcaacagcgccttcacggtggccatggtgaagatggggaacatctcgcccttgactggaacccaggggcagatcaggctcaactgctccaaggttaactagccggtgatgatgagtacgtgatggtctcagggaataaagctaggccccgacattgctgccaatagcgtgcagctagctgtggccgtctcatcactttcatggttcaatggtttcatcagcaagtgcacggaacagactagagagtgtaggtgtatgcatgtgtgatgtcatgtaacgagttgccatgcaaaggcatgaggattacgaacctctctttcgtcgtaatcctagcagctacagatttcaactgtcgtgttaaccaagtgaagtg
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| CDS seq | atggcttcttctctgtcagtggccgtgctcctgtgcctcgccgccgccgccgcggcgcagctgtcgccgacgttctacgacacgtcgtgccccagggcgctggccaccatcAagagcgccgtgacggccgccgtgaacaacgagcctcgcatgggggcgtcactgctcaggctgcacttccatgactgctttctgggagggccgtcatggacggttggtctcgggaggagggactcaaccacggcgagcatggacagcgctaacaacgacctgcctcctcctttcttcgacctcgagaacctcatcaaggcgttcggcgacaagggtttcagtgtcaccgacatggttgctctctcaggtgcgcacacgatcgggcaggcgcagtgcaccaacttcaggggaaggatctacaacgagaccaacatcgacgccggctacgcggcgtcgctcagggccaactgcccgccgacggccggcaccggcgacagcaacctggcggcgctggacacgacgacgccctactccttcgacaccgcctactacagcaacctgctgtccaacaaggggctcctgcactccgaccaggtgctcttcaacggcaacagcacggacaacacggtcaggaacttcgcctccaacagggcggcgttcagcagcgccttctcgtcggccatggtgaagatggccaacctcggaccactcatcgggagccagggacagatcaggcttagctgctccaaacttaatgctgctgctatggcgtcagtggcatcggcgcagctctcggcgacgttctatgacacgtcgtgccccaatgcgttgtccaccatcaagagcgtcataacagccgccgtgaacagcgaggctcgcatgggggcgtcgctgctcaggctgcacttccacgactgcttcctgggagggccatcatggacggttctgttggggagaagggactccaccactgcaagcgaggccttggcaaataccgacctccctgccccttcctctagcctcgcagaacttatcggcaatttctccagaaagggactcgacgcaaccgacatggttgctctctcaggagcacacacgatcgggcaggcgcagtgccagaacttcagggacaggatctacaacgagaccaacatcgattccgccttcgcgacgcaacgccaggccaactgcccacggccgacgggcagcggcgacagcaacctggcggcgctggacacgacgacgcccaacgccttcgacaacgcctactacagcaacctgctgtcgaacaaggggctcctgcactccgaccaggtgctcttcaacggcggcagcgcggacaacacggtcaggaacttcgcgtccaacgcggcggcgttcagcagcgccttcacgacggccatggtgaagatggggaacatctcgccgctgaccgggacgcaggggcagatcaggctcagctgctccaaggtgaactcctaa
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| Protein seq | MASSLSVAVLLCLAAAAAAQLSPTFYDTSCPRALATIKSAVTAAVNNEPRMGASLLRLHFHDCFLGGPSWTVGLGRRDSTTASMDSANNDLPPPFFDLENLIKAFGDKGFSVTDMVALSGAHTIGQAQCTNFRGRIYNETNIDAGYAASLRANCPPTAGTGDSNLAALDTTTPYSFDTAYYSNLLSNKGLLHSDQVLFNGNSTDNTVRNFASNRAAFSSAFSSAMVKMANLGPLIGSQGQIRLSCSKLNAAAMASVASAQLSATFYDTSCPNALSTIKSVITAAVNSEARMGASLLRLHFHDCFLGGPSWTVLLGRRDSTTASEALANTDLPAPSSSLAELIGNFSRKGLDATDMVALSGAHTIGQAQCQNFRDRIYNETNIDSAFATQRQANCPRPTGSGDSNLAALDTTTPNAFDNAYYSNLLSNKGLLHSDQVLFNGGSADNTVRNFASNAAAFSSAFTTAMVKMGNISPLTGTQGQIRLSCSKVNS |
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| Function | Peroxidase 2 [UniProtKB/Swiss-Prot:Q0D3N0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_07g0027490 | OsGoSa_07g0027490.01 | Chr07 | 29219436 | 29225324 | + | NAM | ||
| CDS seq | atggcttcttctctgtcagtggccgtgctcctgtgcctcgccgccgccgccgcggcgcagctgtcgccgacgttctacgacacgtcgtgccccagggcgctggccaccatcAagagcgccgtgacggccgccgtgaacaacgagcctcgcatgggggcgtcactgctcaggctgcacttccatgactgctttctgggagggccgtcatggacggttggtctcgggaggagggactcaaccacggcgagcatggacagcgctaacaacgacctgcctcctcctttcttcgacctcgagaacctcatcaaggcgttcggcgacaagggtttcagtgtcaccgacatggttgctctctcaggtgcgcacacgatcgggcaggcgcagtgcaccaacttcaggggaaggatctacaacgagaccaacatcgacgccggctacgcggcgtcgctcagggccaactgcccgccgacggccggcaccggcgacagcaacctggcggcgctggacacgacgacgccctactccttcgacaccgcctactacagcaacctgctgtccaacaaggggctcctgcactccgaccaggtgctcttcaacggcaacagcacggacaacacggtcaggaacttcgcctccaacagggcggcgttcagcagcgccttctcgtcggccatggtgaagatggccaacctcggaccactcatcgggagccagggacagatcaggcttagctgctccaaacttaatgctgctgctatggcgtcagtggcatcggcgcagctctcggcgacgttctatgacacgtcgtgccccaatgcgttgtccaccatcaagagcgtcataacagccgccgtgaacagcgaggctcgcatgggggcgtcgctgctcaggctgcacttccacgactgcttcctgggagggccatcatggacggttctgttggggagaagggactccaccactgcaagcgaggccttggcaaataccgacctccctgccccttcctctagcctcgcagaacttatcggcaatttctccagaaagggactcgacgcaaccgacatggttgctctctcaggagcacacacgatcgggcaggcgcagtgccagaacttcagggacaggatctacaacgagaccaacatcgattccgccttcgcgacgcaacgccaggccaactgcccacggccgacgggcagcggcgacagcaacctggcggcgctggacacgacgacgcccaacgccttcgacaacgcctactacagcaacctgctgtcgaacaaggggctcctgcactccgaccaggtgctcttcaacggcggcagcgcggacaacacggtcaggaacttcgcgtccaacgcggcggcgttcagcagcgccttcacgacggccatggtgaagatggggaacatctcgccgctgaccgggacgcaggggcagatcaggctcagctgctccaaggtgaactcctaa
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| Protein seq | MASSLSVAVLLCLAAAAAAQLSPTFYDTSCPRALATIKSAVTAAVNNEPRMGASLLRLHFHDCFLGGPSWTVGLGRRDSTTASMDSANNDLPPPFFDLENLIKAFGDKGFSVTDMVALSGAHTIGQAQCTNFRGRIYNETNIDAGYAASLRANCPPTAGTGDSNLAALDTTTPYSFDTAYYSNLLSNKGLLHSDQVLFNGNSTDNTVRNFASNRAAFSSAFSSAMVKMANLGPLIGSQGQIRLSCSKLNAAAMASVASAQLSATFYDTSCPNALSTIKSVITAAVNSEARMGASLLRLHFHDCFLGGPSWTVLLGRRDSTTASEALANTDLPAPSSSLAELIGNFSRKGLDATDMVALSGAHTIGQAQCQNFRDRIYNETNIDSAFATQRQANCPRPTGSGDSNLAALDTTTPNAFDNAYYSNLLSNKGLLHSDQVLFNGGSADNTVRNFASNAAAFSSAFTTAMVKMGNISPLTGTQGQIRLSCSKVNS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_07g0027490 | OsGoSa_07g0027490.02 | Chr07 | 29225169 | 29229875 | + | NAM | ||
| CDS seq | atggcattagcacctactatggcctcagccgcctcggcgcagctgtcggcgacgttctacgacacgtcgtgcccaaacgcattgtccaccatcaagagcgcagtgacggccgccgtgaacagcgagccccgaatgggagcctcgctggtcaggctgcacttccacgactgcttcctcggagggccgtcgtggacggttctattgggaagaagggactccaccactgcgaacgaaagccaagcaaataccgacctccctgccccttcctctagcctcgctgaacttatcggcaatttctccagaaagggactcgacgtaaccgacatggttgctctctcaggcgcacacacgatcgggcaggcgcagtgccagaacttcagggacaggctctacaacgagacaaacatcgactccagcttcgcgacggcgctcaaggccaactgcccacggccgacgggcagcggcgacagcaacctggcgccgctggacacgacgacgcccaacgccttcgacagcgcctactacaccaacctgctgtccaacaagggcctcctgcactccgaccaggtgctcttcaacggcggcagcacggacaacacggtcaggaacttctcttccaacacggcggcgttcaacagcgccttcacggtggccatggtgaagatggggaacatctcgcccttgactggaacccaggggcagatcaggctcaactgctccaaggttaactag
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| Protein seq | MALAPTMASAASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFLGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETNIDSSFATALKANCPRPTGSGDSNLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRNFSSNTAAFNSAFTVAMVKMGNISPLTGTQGQIRLNCSKVN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_07g0027490 | OsGoSa_07g0027490.03 | Chr07 | 29223654 | 29225252 | + | IsoSeq | ||
| CDS seq | atggacggttctgttggggagaagggactccaccactgcaagcgaggccttggcaaataccgacctccctgccccttc |
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| Protein seq | MDGSVGEKGLHHCKRGLGKYRPPCPF |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.143427 | 197.966537 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0677100 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g48010 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0677200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0027630 | RBH | 0.692229 | 27.330782 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0027650 | RBH | 0.000000 | 18.986893 | 0.229096 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0027460 | SBH | 4.093558 | 168.669250 | 0.170569 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0027230 | RBH | 0.368707 | 0.329115 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0027590 | RBH | 0.000000 | 39.439888 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0467000 | RBH | 7.3930235 | 1.8622475 | 0.0355715 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0028040 | RBH | 0.706351 | 3.363862 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0480900 | RBH | 4.7324955 | 0.485087 | 0.0138585 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0027330 | SBH | 0.221365 | 0.326599 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0027770 | RBH | 0.586791 | 80.518730 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0016910 | RBH | 0.0 | 17.341703 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0027820 | RBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0027370 | RBH | 0.135605 | 7.420961 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G027440 | RBH | 0.0 | 1.651773 | 0.376013 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0027180 | RBH | 0.654701 | 156.280701 | 2.542739 |
