Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsCMeo_07g0027460 | OGI:07078280 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr07:28093973-28114432 | ||||||||
Gene Symbol | prx109, POX-2, POX8.1, POX8.1, prx110, POX8, POX22.3, POX22.3, OSPER, OsPOX, POX, Pir3, prx111, POX22, OsPOX1, POX1, OsPOX22.3, OsPR9, PR9, POXGX9, POXgX9, OsPOXgX9, prx112, POX5.1, POX5.1, prx113, POX5, POX3006, POX3006, prx114, Osprx114, PO-C1, POC-1, POC1, OsPOC1, Prx14, OsPrx14 | ||||||||||
DNA seq | ttacgagttcaccttggagcagctgagcctgatctggccgtttgttcccgtcttgggcgcgatgttccccatgttcaccatggccgtcgcgaaggcgctgctgaactccgccgcgttggacgcgaagttcctcaccgtgttgtccgtgctgccgttgttgaagagcacctggtccgagtgcaggaggcccttgttcgacagcaggttggtgtagtaggcgttgtcgaacgcgttcgccgtcgtcgtgtccagcggcgccaggttcatgtcgccggatgtccgtgggcagttggcctggcgttgcgtcgcgaaggccgagtcgatgttggtctcgttgtagatcctgcccctgaaggttgagcactgcgcctgcccgatcgtgtgcgcgcctgaaataggagtgcagaaaattaagcttgcttggtttgatggtttgtgagcatatatggtggatctttacctgagagagcaaccatgtcggttacgctaaggcccttcttggcgaatgcgtctacgagttcttggaggctagcggtaaaaggagggaggtcgctgatcgcgagcgccgcgcttgcacctgtagagtcccttctccccagcgggacagtccacgttggccctcccagctgcatgcgcgttcatatgattattactccattggttaagtacaaaagccgaagcctaataatgtcatatatatggatcgggatcatctgacgtaaaaccagaggaacgtgataactgatatatgagttccaccactgacgggctcacctgttactgttagtgatcacgttaggaagaagttcacgttagaggatccgtttcccacgtacaaccatacaggaatcgatcgagaggagagttcgagaccaagcgtgcaggctatgcatgcagggaaagtgatcttacagcgacgacggagtcacgggcggcgacggtaaggatgtcggcgcatgagacggtctgattgcacacggcctctatctgcgccttgatgctgtcgatgacgccgtagcctctaagagaatccttgtttggaggagcatcctgctcgtttcccgacaacagaacagacgcgtcacaaccctgtacagttagtcaaacaggaagaatgtatggttatttgtcttgcttgtcaattgtcatctaactgcatgcacacatgtacaatatatggttatttgtctgaacatgtcatctaactgcatgcacacatgtacaaTatatatttaacttttctagttcaattcaaatatcactcaagttgcttgactagagatatactgcagtaacgtttaagtcaaaatggaacaaaggcgctggttatgtgtggaacttgcttggacaaaacagtcatggaagtgcagcctgagcagcgacgcgcccatgcggggttcgctgttcacggcggcggtcacggcgctcttgatgatggacatggctctggggcacgacgtgtcgtagaacgtcgccgacagctgcgccgacgccgcggtggccagagccacgaccacaagcaaggaaatgcaagttgctttggccatcgctaagctaacaattaaccaaagatatatacgtttatctctgcctagcaatgagctatctgcacttggctgtggcttgcgaggagagtgctgcatcccatgcatatttatagctagagatttaattagcccacttggttacctgcatatctctgtacttctccagcagagacaaaacattcagatttgatgccttaccagtccagggttagtcctcacaatccactgtcgttgtgcagccattttgatcgtgggtatgaacagtattgaccaacgtgtgttggcattcgacgtgctcacgttgtgtggtgaagtaatttggcttgcatgcacccaagagagacatgatcgggtgacagcgcccaacttaaattgcaaccgccaacactaacccctgcttccctctttcaccgggcaaaattatagtatatccttggaattgtcaggcatcgcttgcaggaaaagtctgtgaaacaatggcgtaacatggctttgtcactttagttacagctgtgttcgtgaactttctatgagcaagtgagtggaaaagtgtggaatactacatccgttttttaaatagatgacgccgttgactttcttttcttacatgtttgaccatttgtcttattcaaaaaatttacgtaattataatttattttgttatgagttgttttatcactcatagtattttaagtgtgatttatatcttatacatttgtataaaatttttgaataagacgaatgattaaacgtgtgagAaaaagtcaacggtgtcatctattaaaaaacggagtgaggagaacagaacagccaccatccctggtcatccatttcactaaacagtctttgggctaccagtatatactcgtaggaaacaaataacagtacagtgcactactactgtaggtagcaccagaacagtaactgttgtgacactgatccaagagaatgtcctaacagttaggacaccacgcctcgccttaaaccatgtaacagttgaatgttcagctctcgcatccatgataatgagtttgtctgccatgcaatcaagcagagttcatttcagttaagctggggccgaactccattgccatttcgatctatcacatacgtgggcatgttcggatgtgattgctaccataacagccgttattgcggcagttcaaaatggctgtagcttgcaacggttcaactacctcagccacagcgtctgtagcagcaatcgcagccaatcaaggccagtactgaattaagttgtaatgacaatatattgatatttcttctgctctcagtatctgtttgtgattaatcagaatctgtacacccgtacattatactagttgatcagcaaagattcagaagaatctgaagttgtaagttactttcacggaagagggattctaatcccccgagagaatatcaacgcgtataaccttttcttttatatttaatataaatagttgtaaaattatttaaaaaattactaatgtagagtataaacagcatataccattctaccaaaaattatattcaaatttgatccgcgcattgagaaataaaaagacaaattcatatgtgaatagtaccaattaatgctggatttgttttttaatttcatttctcaatgtgtgagttgagtctttacttgattttttttagagtagttcatatatatgttgtgaatgttgtcaattttttttggagaattttcaatatacaggtaaaacttcaccgttcagaatctagattagttcaaatatatggactgtcctcgagaagaatggcagaaacaattagtcaaaatttaagcactcattatgattcttaaactgaaatcaaatactggaaatacaaacacatgtatttacaatatcgtgtccagcagcatatgaatgatgatttagaagaagaaaaaacataaagggttcgcgaagaaaatgaaaaaaggacgtatacgagaaacattcacccaatatatttcatgacaagtgcaggtccaacataatccaccggatgtgcactcggtgtggaactccgtactaacagacgaaacacaaccctagatgaatcgattggtcagcatttgtccaagataattctctccttttctgaccgttgtgcagtcattttgctttcctttcaccttcagaatgtttaaaacgacgttgacagctttttttagttttcaattcattttttttcctgtaaaaacaaatcatttcattttctacccgccaaaaaaaagcatttcaatttctgccgctggtgaattttaatgggccgaagtagtggcagcctgccaagtaaagagtaggcctttgcgccgcgaaaataagccggcccacgccccatccaccacgtagcacgctcaccggcatagatgggccaaatcgtcaccttcacgggcctttgcaacgtggagcaaaatatcgccgaggcggtggagatatcttaactcgcgccggcggcgcgcgtgtggtcaccggccgacggcaatccagaaaacaaaaaatcttgctactgcaagatggaggacgaacaggtctagcaagattgcaagagcgggagtcctctctctctcAaaaaaaaagagagagggaaaaaataacttgtaacaggagtggattttgtattggagagagaagtcggtacagatcaagaagcatgcaaacctgctaataaacggacgcagattcagtaacattccccgtgacattctcggtgacatcttcactgaatgctctacgattttaaaggactataattgcgtatgctaatacgagcgtacctcctccgttccaaaaaaaaaaaatccaatcctaataacgaacatgtgtcaagattcattgttaggattggattctttctaagacggagtagtatgtttcacctgtaattaattgcaactggaattctttccttgatgcattcgtgcactggtaattaatcatgttgtcgagtgcccagcgtctggatatatacaaaccggtcgatcagatcacgagttgacggcggagcagatgagcctgatctgtccctgtgtcccggtcagcggcgagatgttccccatcttcaccatggccgtcgcgaaggcggcgccgaacgccgccgcgctggacgcgaagctcctgaccgtgttgtccgtgctgccgttgctgaacagctcctggtcggagtgcaggagccccttgttcgacagcaggttgcggtagtaggcgttgtcgaacgcggtgggcgtcgtcgtgtccagcggcgccaggttgccgtcgccgctgcccggcgtcgccgggcagttggccttgagcgccgccgcaaaggcggcgtcgatgttggtctcgttgtatagcctcgtcctgaagcccctgcaccgtgccataccaatcgtgtgcgcacctgcataattgaaacaaaaacatatcgttttcaaatttcaacacaagctgttgtttactacacttccatggttgattaggagatcgatcgaggagttatatatattgtgtgcacctgagagagcaaccaagtcagtggcgctaagtcccttgctcgcgtacgcgctgatgagctgtgcgaggctatctgtagaaggagcaaggctgctaatcacctgggccgcggtagcggctccggtggagtcccttctccctagcggaacactccatgacggacctccaagctgcatgccaaattaaaaaccaaataaagcaattcagcatcacagaattcgtaatcgcgagctcgatatcttgtgtcgttgatatatgcatgcatggttaccgcgacgacagagtcgcgggcggcgacggtgaggatgtcggcgcaggagacggtctgcttgcacacggcctcgatctgcgtcttgatgctgtcgatgacgtcgtagcctctgacagaaaagtttggggctgcattcctctcgtttccggccagcaaaattgaggcgtcacagccctgtgttgattcagacaaaaattaagccacgattattttcttgcaacgctgctaactcacgtagtctgacagacaggcaaacctgttagctacttttcggccttaaatcaaagtAaaaaaaaaaaacagggtggtttgtgagatggaaacgtgcttggacgaagcagtcgtggaagtgcagcctgagcagagacgcgcccatgcgtggctcgttgttcacggcggccgtcacggtgctcttgatgatggacatggctcgggggcacgacgtgtcgtagaacgtcggcgacaaatgcgcggtggccgtggagaccagcgccgcgagcatcagtaataggccaagagaagaggcagaagccatcactactctttggaacagagcacactgcagtttcttcctagcaagtactcgtagcaactactcctgtctaagcagctcttgcaagagaaaacgctgcattgcatgcatatttatagctcgcgattttctcccagcaaaatgagcctgcatattgctagatagtagatacattggagataaacagccaacaagtatattcgggagttatgtcttcacatatgccagcaaaagtgcaaaatcttggtcgttctctacttctctgtagggactccctaatattactagtacgcatgtgtccaagtctgataacaccagacttgatttgctagaaacgatggctgctacaagccaacatatgcagcattcgtgtgggagagggccaaatctgtcaacgtttcgccagagctgcattgctgtaaagtaattttgcattctagttcctcttggctggataaaccgatgttgacaattttaattatcttttagtttctatacctgtccgacataagtggttttcactttaggcacagatttctgtttagagtttacaggtaggttagccccattttaattgctgaaccacccccccctatatttatttgaaaaagctaatactctctctttcccaatttaatcatcatataatggaatccaaaatttttcaagttgatcatcatataactgcatggacacgaattttatcagaatacaattaatacatcatgggagaatgtagggagtagaaaggtaacagtattttttaaaaacatagtacagtcgtgcaaacgctcatataaacacacaaactaaatacttcctcattcctaaattgatcatcatatatgtttatgcacgaggaccaagtataatttaaatcacattaatcaaaacaccatgcacacattctcccataatgtatgtatcgattaaaacaccatgtcaattacatcttagcatgtacacattctttcatgctgtattaattgtattttgataaaatctgtgtccatgcggttatatgatgatcgatttaagaaattttaaattccattatatgatggataaacatgggaaggagtgagtacatcattgcttttattatctggttctaattttatcttccatgcatgtattaggattcaaacattaattaattgggcatgtagacaataaattgatcaaaaTttttaattaacgtgggagcttgtgcactactagttgatgatatatctataagattactattttttggtgtacgtgatcatcttccatttggccaccatttctcttctcactcgtttggaaaagagtttggacagtatttggaccacaactatttccgaagtaaatcttctaccagaaaaaatagacgaacacacattttctgataaaccttagccagtcgaattatttgggtgatgcacaagcagttgaaatgatgaaccgagcgactgacaggatgaggtcaacagtcaacatgctataaattgttatgccaaaccgaacaaaactatccgtgtgcgtgtttttttggacgccatacaaccctgctatacacatgcacatggcgatttaaggcgtacacaggaataagtccacttattccctttttttttcaactcattttcctctttttttcatatgcacgcttttcaaactactaaacgatacgttcttttcaaaagttttctacaggaaggttttttttAaaaaaatcatattaatttattttttaaaatttttaaattaatacttaattagttatacactaatgattgtttcgttatacctgccggagaggaggggttcccaacccctcctcccgaacacagccggggatctgtcctcttaacattgagttcgaattacattctcaaattggacatggctccttgcatcgcatcgggcttggccgcccttctccccacacacccgctggacgtcggctgccaaccttatccacgctgcctgcgacctgcttcctggttggggattgggaagagaggagagagcgggagagaggaggaaagagttagttactaacacacgggctagcatgggtcccacgctaactcagcacaactgaccagagtcaaagcgccacatcggacgaaatcaggagccatactatattagaacgaaagttaacacggttttacgagttcggggacaggctatacttgatattgcggttcagcaacgaattttcaaacttgccatcaaagatgcgggacgcaaagtgaacttattccagcgtacacaagcggactacaatccactttccagaccagtagcccattaactaggcgtagttgggccacatcacggggacactaaaaggtgcagcccatttcagctctccaggcggacttcttaagttcatctaaggtcccttaacttatcaacgaatccgattttcgtctttcaaccgcaaaaccagatacaacgggtcccttaactatcaaaaccggtgcatattaggtccctcggcggtttcgatggcggttttggctgacgtggcgcctgcgtggctaattttgactcggtctcgatctgacgtggtatgacgtggcgcttacgtggcaatctgacccgggaaaataataaaccccatgggacccacatgtcagtttcacacacaaaaaaaaataataataatggtggaacccacgctgccccacatgtcagtctactcacccctcctcttctgcttcctctctctcattctctcctctcttcatctctctcttgcactaggggatgcggccggcgacgacgacggcggcggaaatggagaagagtgattgccagaggcataggtgtgacgtcgccgggggcgctttgaggcggaagtagactcttacgacgtggccgttggaggtgagcgaggtcgtcatggactcacgggattggcggtgtcgtcggcagcggcggagcaggagttgtagttggagtcctcgtcgtcgacctcgagttcatcaatgtgctcgagcatcacccaccattagtagtcgccgacggcggaaggtagcgttgccatctcctgttgggtttccatgggccgcggcgagcggatcgatatgggttcctcgtcagtccggccggaacggtgttttcttgcccaaaacaatgatcatttattcattcatcaaccccgtcataacacaagcaaatgatgatgacgaagcaaaatatactccagtcagctagtactagtcgctatttcttctacctttgtatgattaggcatataaacgcggagcggaggtcgtcggctctggtgccccagccgaggccgtggacgaagagcttcctgctcacgggatcggcctccgccgcgcgccgcacggtcgtcatcatcactagggtcgtcttcgcagccggccgcctctcccctctcccgccggcgaggtggccccctcacccgcccacgtggacagccacctccgaggatgcgcgcgtgtgtcggccggtcggcgggacacgttcatcccgccgccgaggatgccgaggtcgacgtcgacgtcgtccgcagccacggccgcggcggcgctgcctccgccaccgggctggttcccttctatccgctagtttccctcccactagccgccgcgccgcgccccttctcccagccggacaccgtcctctccccgccgcccgtgaaccggagagaagagagagaggagaggggagagagatgaagacagagaagatggggaagaggagaatcagaatgacccagcgcaagagagagacgaagagaggggaggaggagagagaggaagcagaagaggaggggttaattagactgacatgtggggtccgcgtgggtcccaccattattattattattgtgtgtgaaactgacatgtgggtcccacggggtttattattttccggatcgaattgccacgtaagcgccacatcagtgccacgtcagatcaagaccgagtcaaaattagccacgtaggcgccacgtcagccaaaaccactatcgaaaccgccgagggacataatatgcaccggttttgatagttgagggaccaattgtatctggttttgtggttgaaggataaaaatcggattcgttgacaagttaagggaacttagatgaacttattccccagaagaaaccatcgca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tcctactctctctttttacttgagtcaaactagagatggtcaaagctaagcttggaaatggaatctcgtatcagtgtcagtgacgagtccaaagctagccttttgacgttagtaattctgtcagtccaactgaattgacagtgtcacataacttagctaattctgaacacagtgcaatcagacgcaaaacgaaaactgaacatagatttattaattactgcagctaaagttagccatgagatcgatgagatcagggacttgcttggacaaagcagtcatggaagtgcagcctgagcagtgacgcccccatgcgaggctcgttgttcacggcggccgtcacggcgctcttgatggtggccagcgccctggggcacgacgtgtcgtagaacgtcggcgacagctgcgccgccgcggcggcggcgaggcacaggagcacggccactgaaagagaagaagccat
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CDS seq | atggcattagcacctactatggcctcagccgcctcggcgcagctgtcggcgacgttctacgacacgtcgtgcccaaacgcattgtccaccatcaagagcgcagtgacggccgccgtgaacagcgagccccgaatgggagcctcgctggtcaggctgcacttccacgactgcttcctcggagggccgtcgtggacggttctattgggaagaagggactccaccactgcgaacgaaagccaagcaaataccgacctccctgccccttcctctagcctcgctgaacttatcggcaatttctccagaaagggactcgacgtaaccgacatggttgctctctcaggcgcacacacgatcgggcaggcgcagtgccagaacttcagggacaggctctacaacgagacaaacatcgactccagcttcgcgacggcgctcaaggccaactgcccacggccgacgggcagcggcgacagcaacctggcgccgctggacacgacgacgcccaacgccttcgacagcgcctactacaccaacctgctgtccaacaagggcctcctgcactccgaccaggtgctcttcaacggcggcagcacggacaacacggtcaggaacttctcctccaacacggcggcgttcaacagcgccttcacggcggccatggtgaagatggggaacatctcgcccttgactggaacccaggggcagatcaggctcaactgctccaagagtagtgatggcttctgcctcttctcttggcctattactgatgctcgcggcgctggtctccacggccaccgcgcatttgtcgccgacgttctacgacacgtcgtgcccccgagccatgtccatcatcaagagcaccgtgacggccgccgtgaacaacgagccacgcatgggcgcgtctctgctcaggctgcacttccacgactgcttccttggaggtccgtcatggagtgttccgctagggagaagggactccaccggagccgctaccgcggcccagatagcctcgcacagctcatcagcgcgtacgcgagcaagggacttagcgccactgacttggttgctctctcaggtgcgcacacgattggtatggcacggtgcaggggcttcaggacgaggctatacaacgagaccaacatcgacgccgcctttgcggcggcgctcaaggccaactgcccggcgacgccgggcagcggcgacggcaacctggcgccgctggacacgacgacgcccaccgcgttcgacaacgcctactaccgcaacctgctgtcgaacaaggggctcctgcactccgaccaggagctgttcagcaacggcagcacggacaacacggtcaggagcttcgcgtccagcgcggcggcgttcggcgccgccttcgcgacggccatggtgaagatggggaacatctcgccgctgaccgggacacagggacagatcaggctcatctgctccgccgtcaactccttagcgatggccaaagcaacttgcatttccttgcttgtggtcgtggctctggccaccgcggcgtcggcgcagctgtcggcgacgttctacgacacgtcgtgccccagagccatgtccatcatcaagagcgccgtgaccgccgccgtgaacagcgaaccccgcatgggcgcgtcgctgctcaggctgcacttccatgactgttttctgggagggccaacgtggactgtcccgctggggagaagggactctacaggtgcaagcgcggcgctcgcgatcagcgacctccctccttttaccgctagcctccaagaactcgtagacgcattcgccaagaagggccttagcgtaaccgacatggttgctctctcaggcgcgcacacgatcgggcaggcgcagtgctcaaccttcaggggcaggatctacaacgagaccaacatcgactcggccttcgcgacgcaacgccaggccaactgcccacggacatccggcgacatgaacctggcgccgctggacacgacgacggcgaacgcgttcgacaacgcctactacaccaacctgctgtcgaacaagggcctcctgcactcggaccaggtgctcttcaacaacggcagcacggacaacacggtgaggaacttcgcgtccaacgcggcggagttcagcagcgccttcgcgacggccatggtgaacatggggaacatcgcgcccaagacgggaacaaacggccagatcaggctcagctgctccaaggtgaactcgtaa
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Protein seq | MALAPTMASAASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFLGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETNIDSSFATALKANCPRPTGSGDSNLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRNFSSNTAAFNSAFTAAMVKMGNISPLTGTQGQIRLNCSKSSDGFCLFSWPITDARGAGLHGHRAFVADVLRHVVPPSHVHHQEHRDGRREQRATHGRVSAQAALPRLLPWRSVMECSAREKGLHRSRYRGPDSLAQLISAYASKGLSATDLVALSGAHTIGMARCRGFRTRLYNETNIDAAFAAALKANCPATPGSGDGNLAPLDTTTPTAFDNAYYRNLLSNKGLLHSDQELFSNGSTDNTVRSFASSAAAFGAAFATAMVKMGNISPLTGTQGQIRLICSAVNSLAMAKATCISLLVVVALATAASAQLSATFYDTSCPRAMSIIKSAVTAAVNSEPRMGASLLRLHFHDCFLGGPTWTVPLGRRDSTGASAALAISDLPPFTASLQELVDAFAKKGLSVTDMVALSGAHTIGQAQCSTFRGRIYNETNIDSAFATQRQANCPRTSGDMNLAPLDTTTANAFDNAYYTNLLSNKGLLHSDQVLFNNGSTDNTVRNFASNAAEFSSAFATAMVNMGNIAPKTGTNGQIRLSCSKVNS |
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Function | Peroxidase 2 [UniProtKB/Swiss-Prot:Q0D3N0] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsCMeo_07g0027460 | OsCMeo_07g0027460.01 | Chr07 | 28108606 | 28114432 | - | NAM | ||
CDS seq | atggcttcttctctttcagtggccgtgctcctgtgcctcgccgccgccgcggcggcgcagctgtcgccgacgttctacgacacgtcgtgccccagggcgctggccaccatcaagagcgccgtgacggccgccgtgaacaacgagcctcgcatgggggcgtcactgctcaggctgcacttccatgactgctttctgggagggccgtcatggacggttggtctcgggaggagggactcaaccacggcgagcatggacagcgctaacaacgacctgcctcctcctttcttcgacctcgagaacctcatcaaggcgttcggcgacaagggtttcagtgtcaccgacatggttgctctctcaggtgcgcacacgatcgggcaggcgcagtgcaccaacttcaggggaaggatctacaacgagaccaacatcgacgccggctacgcggcgtcgctcagggccaactgcccgccgacggccggcaccggcgacagcaacctggcggcgctggacacgacgacgccctactccttcgacaacgcctactacagcaacctgctgtccaacaaggggctcctgcactccgaccaggtgctcttcaacggcaacagcacggacaacacggtcaggaacttcgcctccaacagggcggcgttcagcagcgccttctcgtcggccatggtgaagatggccaacctcggaccactcaccgggagccagggacagatcaggcttagctgctccaaacttaatgctgctgctatggcgtcagtggcatcggcgcagctctcggcgacgttctatgacacgtcgtgccccaatgcgttgtccaccatcaagagcgtcataacagccgccgtgaacagcgaggctcgcatgggggcgtcgctgctcaggctgcacttccacgactgcttcctgggagggccatcatggacggttctgttggggagaagggactccaccactgcaagcgaggccttggcaaataccgacctccctgccccttcctctagcctcgcagaacttatcggcaatttctccagaaagggactcgacgcaaccgacatggttgctctctcaggagcacacacgatcgggcaggcgcagtgccagaatttcagggacaggatctacaacgagaccaacatcgattccgccttcgcgacgcaacgccaggccaactgcccacggccgacgggcagcggcgacagcaacctggcgccgctggacacgacgacgcccaacgccttcgacaacgcctactacagcaacctgctgtccaacaaggggctcctgcactccgaccaggtgctcttcaacggcggcagcgcggacaacacggtcaggaacttcgcgtccaacgcggcggcgttcagcagcgccttcacgacggccatggtgaagatggggaacatctcgccgctgaccgggacgcaggggcagatcaggctcagctgctccaaggtgaactcctaa
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Protein seq | MASSLSVAVLLCLAAAAAAQLSPTFYDTSCPRALATIKSAVTAAVNNEPRMGASLLRLHFHDCFLGGPSWTVGLGRRDSTTASMDSANNDLPPPFFDLENLIKAFGDKGFSVTDMVALSGAHTIGQAQCTNFRGRIYNETNIDAGYAASLRANCPPTAGTGDSNLAALDTTTPYSFDNAYYSNLLSNKGLLHSDQVLFNGNSTDNTVRNFASNRAAFSSAFSSAMVKMANLGPLTGSQGQIRLSCSKLNAAAMASVASAQLSATFYDTSCPNALSTIKSVITAAVNSEARMGASLLRLHFHDCFLGGPSWTVLLGRRDSTTASEALANTDLPAPSSSLAELIGNFSRKGLDATDMVALSGAHTIGQAQCQNFRDRIYNETNIDSAFATQRQANCPRPTGSGDSNLAPLDTTTPNAFDNAYYSNLLSNKGLLHSDQVLFNGGSADNTVRNFASNAAAFSSAFTTAMVKMGNISPLTGTQGQIRLSCSKVNS
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsCMeo_07g0027460 | OsCMeo_07g0027460.02 | Chr07 | 28093973 | 28108761 | - | NAM | ||
CDS seq | atggcattagcacctactatggcctcagccgcctcggcgcagctgtcggcgacgttctacgacacgtcgtgcccaaacgcattgtccaccatcaagagcgcagtgacggccgccgtgaacagcgagccccgaatgggagcctcgctggtcaggctgcacttccacgactgcttcctcggagggccgtcgtggacggttctattgggaagaagggactccaccactgcgaacgaaagccaagcaaataccgacctccctgccccttcctctagcctcgctgaacttatcggcaatttctccagaaagggactcgacgtaaccgacatggttgctctctcaggcgcacacacgatcgggcaggcgcagtgccagaacttcagggacaggctctacaacgagacaaacatcgactccagcttcgcgacggcgctcaaggccaactgcccacggccgacgggcagcggcgacagcaacctggcgccgctggacacgacgacgcccaacgccttcgacagcgcctactacaccaacctgctgtccaacaagggcctcctgcactccgaccaggtgctcttcaacggcggcagcacggacaacacggtcaggaacttctcctccaacacggcggcgttcaacagcgccttcacggcggccatggtgaagatggggaacatctcgcccttgactggaacccaggggcagatcaggctcaactgctccaagagtagtgatggcttctgcctcttctcttggcctattactgatgctcgcggcgctggtctccacggccaccgcgcatttgtcgccgacgttctacgacacgtcgtgcccccgagccatgtccatcatcaagagcaccgtgacggccgccgtgaacaacgagccacgcatgggcgcgtctctgctcaggctgcacttccacgactgcttccttggaggtccgtcatggagtgttccgctagggagaagggactccaccggagccgctaccgcggcccagatagcctcgcacagctcatcagcgcgtacgcgagcaagggacttagcgccactgacttggttgctctctcaggtgcgcacacgattggtatggcacggtgcaggggcttcaggacgaggctatacaacgagaccaacatcgacgccgcctttgcggcggcgctcaaggccaactgcccggcgacgccgggcagcggcgacggcaacctggcgccgctggacacgacgacgcccaccgcgttcgacaacgcctactaccgcaacctgctgtcgaacaaggggctcctgcactccgaccaggagctgttcagcaacggcagcacggacaacacggtcaggagcttcgcgtccagcgcggcggcgttcggcgccgccttcgcgacggccatggtgaagatggggaacatctcgccgctgaccgggacacagggacagatcaggctcatctgctccgccgtcaactccttagcgatggccaaagcaacttgcatttccttgcttgtggtcgtggctctggccaccgcggcgtcggcgcagctgtcggcgacgttctacgacacgtcgtgccccagagccatgtccatcatcaagagcgccgtgaccgccgccgtgaacagcgaaccccgcatgggcgcgtcgctgctcaggctgcacttccatgactgttttctgggagggccaacgtggactgtcccgctggggagaagggactctacaggtgcaagcgcggcgctcgcgatcagcgacctccctccttttaccgctagcctccaagaactcgtagacgcattcgccaagaagggccttagcgtaaccgacatggttgctctctcaggcgcgcacacgatcgggcaggcgcagtgctcaaccttcaggggcaggatctacaacgagaccaacatcgactcggccttcgcgacgcaacgccaggccaactgcccacggacatccggcgacatgaacctggcgccgctggacacgacgacggcgaacgcgttcgacaacgcctactacaccaacctgctgtcgaacaagggcctcctgcactcggaccaggtgctcttcaacaacggcagcacggacaacacggtgaggaacttcgcgtccaacgcggcggagttcagcagcgccttcgcgacggccatggtgaacatggggaacatcgcgcccaagacgggaacaaacggccagatcaggctcagctgctccaaggtgaactcgtaa
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Protein seq | MALAPTMASAASAQLSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFLGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETNIDSSFATALKANCPRPTGSGDSNLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRNFSSNTAAFNSAFTAAMVKMGNISPLTGTQGQIRLNCSKSSDGFCLFSWPITDARGAGLHGHRAFVADVLRHVVPPSHVHHQEHRDGRREQRATHGRVSAQAALPRLLPWRSVMECSAREKGLHRSRYRGPDSLAQLISAYASKGLSATDLVALSGAHTIGMARCRGFRTRLYNETNIDAAFAAALKANCPATPGSGDGNLAPLDTTTPTAFDNAYYRNLLSNKGLLHSDQELFSNGSTDNTVRSFASSAAAFGAAFATAMVKMGNISPLTGTQGQIRLICSAVNSLAMAKATCISLLVVVALATAASAQLSATFYDTSCPRAMSIIKSAVTAAVNSEPRMGASLLRLHFHDCFLGGPTWTVPLGRRDSTGASAALAISDLPPFTASLQELVDAFAKKGLSVTDMVALSGAHTIGQAQCSTFRGRIYNETNIDSAFATQRQANCPRTSGDMNLAPLDTTTANAFDNAYYTNLLSNKGLLHSDQVLFNNGSTDNTVRNFASNAAEFSSAFATAMVNMGNIAPKTGTNGQIRLSCSKVNS
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsCMeo_07g0027460 | OsCMeo_07g0027460.03 | Chr07 | 28105242 | 28105646 | - | IsoSeq | ||
CDS seq | aagccacggccagcgaaaaagcttaaaaaaaactgcagttatttaggtaggattaagcatacgcgcacggcgcatcatatcgctcactctgcatggcttcggcttcttctgtca |
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Protein seq | KPRPAKKLKKNCSYLGRIKHTRTAHHIAHSAWLRLLLS |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 4.093558 | 168.669250 | 0.170569 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0677200 | RBH | 2.916170 | 2.943020 | 3.440416 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g48020 | RBH | 1.444166 | 1.648255 | 0.554569 |
Nipponbare | IRGSP 1.0 | RAP-db | Os07g0677500 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0027630 | RBH | 0.692229 | 27.330782 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0027650 | SBH | 0.000000 | 18.986893 | 0.229096 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0016960 | RBH | 0.0 | 11.738766 | 0.896377 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0027230 | RBH | 0.368707 | 0.329115 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0027570 | RBH | 2.661448 | 14.622078 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0467100 | RBH | 3.735664 | 10.843553 | 0.112144 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0028040 | RBH | 0.706351 | 3.363862 | 0.000000 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0481000 | RBH | 2.2265265 | 0.7525525 | 0.3815175 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0027330 | SBH | 0.221365 | 0.326599 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0027780 | RBH | 2.550790 | 0.000000 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0027500 | RBH | 4.002941 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0027830 | RBH | 0.649500 | 0.0 | 0.220872 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0027360 | RBH | 1.318901 | 3.328004 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G027450 | RBH | 1.549415 | 0.000000 | 0.206194 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0027190 | RBH | 0.202710 | 48.413288 | 0.000000 |