Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNaBo_05g0023820 OGI:05070420 | 16/16 NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) Chr05:26898118-26904653
Gene Symbol -
DNA seq

atggcggcacggtcgtcgttgtttcttctctgccttgccaccgccaccgccggcgtactccaagctcgtgcccagcctgacagcaaaggtacgtagtacaatcctagtatcctacctcatagtaatgcgcgcaatgcttcacaaatcaaaaagacatcaatgttcaatgaactaaaagagcatatgtttttcatgcttttgcaggtttcatcagcgtagactgcgggctcccggggaagacgagctacattgacgacaagaccaagatatcctacgcctcggacgacggattcaccgacggcggcaagcactacaacgtctcgccggagtacatcaagccggcggtcacggcgcgctactacaacgtgcgcagcttccccgacggcgcgcgcaactgctacacgctccggtcgctcgtggccggcctcaagtacctcatccgcgccaccttcatgtacggcaactacgacggcctcaacaagctgcccgtgtcgtttgacctccacatcggcgtcaacttctggacagtggtgaacatcacggacccgatccagccggtgaaccgggaggccatcgtcgtcgtgcccgacgactccgtgcaagtctgcctggtgaacaccggcgccgggacaccgttcatctccgggttggacctcaggcctcttatgaacaagctctacccgcaggtgaatgccactcagggcctactccaactcgccaggctcaacttcggcccatctgacgaaacctccatcaggtgagctaagttaaagtttcctacgcgtatagactgtttatatttattatcatatcatttatttatactatcatcagtattactggtgataattcaaactcgataaattttaactaaaagttagtctcacaatatagggtaattttactattcttaagaagttatcgaaaggtactacctccaggtactaaatattttgaggtatcaaaattattggtgtaaaatcttggtatctttaggcactttatcaaatatcataaaattttccacaatatataggtttagtgatataaatagcgtaatattagattcgtatttacagatactttcatatattttttctgattaccaacatgcaaaacgaggggatatctcttaaaggatgaaatcacttttcccgataagagccagatatttagctaagagcaggtacaatagcaggctataagccagctacaaatatattttaagaaaataaatgaggagagagaagagaagcgggctacagatttatagccagctgtagcatggactccaatacacagtgtgtatgacaggtgggtctaggtactaatagtgtagtatgtaactattgtatgaatgagctattagattggctatagatgaattggagctaatagttggctatactattaaacttgctctaattctgtgtagataaattttacggtttttgagaaagtaccaatttttaaattagaaaaattgatatcttctaatatttttttaaggatggtaaaattatctgtaggaaatgcaactgatcgattcaatggccaggtatccggatgatccgcacgacagagtatggtttccttggtttgatgcggccaagtggaacgagatatcaacgacaaacagggttcagaacatagacaacgacctgttcgaggcgccgacggcggtgatgcagacagcggtcacgccaatcaacgcctccaacaacatcgacttcttctggaactcacagccgcagcccaacgacccagcgccagggtacatcgccatctttcacttctccgagcttgagaacctccccaacaacgcctcacggcaattctatatcaacatcaacggcatattgttcgacgatggtttcacaccatcgtttctctacgccgaggcctcctacagctccaaaccctttgtgcgacacccgcagtacaacatcaccattaacgccaccgccaactcgacgatgccgccgctcatcaacgccgttgaggtgtactctgtcatctccaccgctaacattggcaccgactcacaagatggtatgtgctcagggttttcaatttcgatttcatctaaaatttcagccatttcagtagaattaaaatttttAaaattttgaaaatttcagaaatttttggaccgaaattttctgaaattttgacacaatttaacagaatttgactaaattcatAaaaaaattgagaaaaactgaaatatgcacatacatgagctagctgatggtcaagcatgtcatgtgcattgatgaaattttttggtgattgacagtatcagcaatcatgacgatcaaggcgaagtaccaggtgaaaaagaattggatgggtgacccgtgcctccctagaaatcttgcgtgggataatttgacctgcagctatgccatttctaaccctgcaagaatcacgagcttgtaagtaataattcattccattagccaaaaacaacatgactattgtgatgaaaaaacaaaactattacctccatcccaaataaaaagagtgcaaacgtgtatggctattgttaaactattgtaaatatgaaaattttaattgtatacacaatgcatagttaatggcttagattaaaataattaaagagaacccatcaattataacttgctaattattaatttaaagttcaaaattaaattaataaaagagatgatatacttgttgcttgtgaatttagaaattattaagttttaggatactaatgaaactaaagaggccatgcatggcagtaaaaattaattaagaccccatgttatttccaatagaattttttatttgatatgaaattttaatacaatctatggtggtcgataccaccatcaatcaccagcctgatcttttttattattattattagcaccctcagaatgccaaatcagcacatgcataaatagcaagaggaaattaaatctaatgggagctaattaactgtgcaatgaaattgggctgatcatattctctttgcagaaacctgtcaaaaattggtttgagtggtgagatatcgtcctcttttgggaatctcaaggccctccaatatttgtatgttatgagttcatgatgtcggatgtattaacttgtttgcgtaatctgagttaaaatttggaaaatcttgctccatatcttgcagggatctatcaaacaacaacttgacaggctcgattccaaatgccctttcacagttgtcttcattgacaatcttgtaagtttggcaattcttttatcaacttttacctagagtaaagtacacggtcggtccttaaagttggagcgaggtgtcacttaggtccatgatcttgaaaaatcgacattaggatccacggtcttgtttaagtgactcattgaggtccaaaggatctctgaccgggttgactagcttatgtggccatccagagtggcaacatattttcatgtgagctcctccacatccgatccaacccttcttccccaaatcttctttcagcactggtggtgaggacgacgacgggtggctgatggtggacaacaacgatggcgcagctggtggtagacaacgacagcgatggcggacggttgaaggcgcggcgcgcgcggttgagggccgaaggagaggggagcagcggtaagggcagagggtgtcaagctccggcagctgagctctatacaagcttgaggccatggtggtggaggttggaccagtgacgactcggggtatggtggcggcagcggctgagctcagggacgacacgagcgagctcgccggaggtcaccctcgtgctgctacttcgtgtcgtccacgcacatctagccgggagacgacgaggggatgacgagtggtggcgatcgacgcggagcaggaagcagcaacacatcaagggccaggagacaacgaggggatgtcgagagacggcggcttgcagccgtagggatctggccgcagctgggacgggatccaccggtgtgcacgccgccgcctagcgcggtgatgtccacggccttagtgcggccgtcgtcgctggatccgacggattactcgatgacatcaccgtcattgaggctccgatagctgtcgaacttgagggaggaccggtggacgaagaggtcctcgccgccgttgtcgggagtgatgaagccgaacccattggtggcgtcgaaccccttcatcgtcccctcaccctctccgacaccacctcgccctcgccaccccaagtcgaaccctccaaaaccctaaaagctgcccgccgtctcgctccactggccagccgccaccaccgccctactcgcccttctccctctttgcgcatgctcgccaactcgtcgccgtacctgtctccctcctcgtcgtcactgccgccgccagcccctgcaaccgcaaaccatagaaatcacactgaaagaagatatggggaagaagggttggatcggatgcgggggaggggggcgaaatgcaaatatactgccactctggacggtcacgtaagccagtcaacctggtcagaggtcctttggaccattatgagtcacttaaacaagatcgcggaccctaatgtcgatttttcaagatcatggacctaagtaacacctcgcttcaactttaaggaccgaccatgtactttactcttttacctacgtactctttagaatccttttgaactaatatcctactgtatgtcttcttttagagatttgacaggaaaccaactaaatggaacaattccgcctggacttctcaagagaattcaggatggctttttaaatctaaggtaatgacaccacattcttcttatagcagtcttcttcagcaaaaggtgcagatcaatttttcagaaaatggacataaacatatttatgtcattaatatatagatatggaaataacccaaatatttgcaccaatggcaactcatgtcaaccaccaaaaaacaagagcaagctagctatctacattgttgttcctatagttctggtcctcgcgatagtatcagtgacgacactactctattgcctactgagaagaaaaaaacaaggtgggtctttctatcatttgtctgctctacttcatcttcttgaatactactgatgctagttccattcttcacgtacaaaggatcaatgaacaattctgtaaagccacaaaacgagacaatgagatatgggccaacaaataatggctccgggcataattcatcactgcggcttgagaaccgccggtttacatataatgaactggagaagataacgaacaaattccagcgagttcttggacaaggaggctttggaaaagtctatgatggcttcttggaggatggcactgaagtggcagtcaaagtgaggactgaatcttccaaccaaggtgataaggagtttcttgtagaggtagaattttttaagctgcactttttcttgctatgtaaaaatttctatcaagaaaagtctccatgggggcatcattaaatagacaagtttcaccactttaggctcaaattttaacccggattcatcacaagaaccttgtctctatgatcggctattgtaaggatgagaaatatatggcacttgtgtatgagtacatgtcagaaggaacccttcaagaacacattgcaggtccgaactaacttcatctaccagcttaTttttttagtcctttcatgatctccaattcttatatttgcaggaaaaggaaatgatgggagatacttaacctggaaagagaggcttcgaattgcgctggaatctgctcaaggtaactacttagaatttctaatgctatttttagtttgattttacattttttctctctctagaagcttgatcagtatttcaattacatggtgaattaatgatcagggctagagtacctacacaaagggtgcaaccctcctcttattcaccgtgatgtgaagggaaccaacattttgttgaacacgaggctagaggccaagattgctgattttggtttgtccaaggttttcaatcctgagaacggcacccatgtatctacgaacaaacttgttggcacacctggatatgtggatccagagtatgttgtctttcttgaagccccctttttaaagttcttttgttagagaaatactaattgtaagacttattgggactgaccaaatgcgtaggtaccaatcaacaatgcaaccaacgactaagagtgatgtctatagctttggtgttgtcctgttggagttggtaacagggaagccagctatcttgcgtgatccagagcccatcagcatcatccattgggcacaacaacgcttagcacggggtaacattgagggtgtggtggatgcaagcatgcatggtgactacgatgtgaatggcctatggaaggttgcagacattgcactcaagtgtacggcgctttcgtcagcacaccgccccactatgaccgacgtggtggcacagttgcaagagtgcctcgagctagaggataagcaccaggttataaacaatggcttttataatggcaatagtggcgatctaaactctaacttctacaccacttaa

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CDS seq

atggcggcacggtcgtcgttgtttcttctctgccttgccaccgccaccgccggcgtactccaagctcgtgcccagcctgacagcaaaggtttcatcagcgtagactgcgggctcccggggaagacgagctacattgacgacaagaccaagatatcctacgcctcggacgacggattcaccgacggcggcaagcactacaacgtctcgccggagtacatcaagccggcggtcacggcgcgctactacaacgtgcgcagcttccccgacggcgcgcgcaactgctacacgctccggtcgctcgtggccggcctcaagtacctcatccgcgccaccttcatgtacggcaactacgacggcctcaacaagctgcccgtgtcgtttgacctccacatcggcgtcaacttctggacagtggtgaacatcacggacccgatccagccggtgaaccgggaggccatcgtcgtcgtgcccgacgactccgtgcaagtctgcctggtgaacaccggcgccgggacaccgttcatctccgggttggacctcaggcctcttatgaacaagctctacccgcaggtgaatgccactcagggcctactccaactcgccaggctcaacttcggcccatctgacgaaacctccatcagggttcagaacatagacaacgacctgttcgaggcgccgacggcggtgatgcagacagcggtcacgccaatcaacgcctccaacaacatcgacttcttctggaactcacagccgcagcccaacgacccagcgccagggtacatcgccatctttcacttctccgagcttgagaacctccccaacaacgcctcacggcaattctatatcaacatcaacggcatattgttcgacgatggtttcacaccatcgtttctctacgccgaggcctcctacagctccaaaccctttgtgcgacacccgcagtacaacatcaccattaacgccaccgccaactcgacgatgccgccgctcatcaacgccgttgagaattggatgggtgacccgtgcctccctagaaatcttgcgtgggataatttgacctgcagctatgccatttctaaccctgcaagaatcacgagcttaaacctgtcaaaaattggtttgagtggtgagatatcgtcctcttttgggaatctcaaggccctccaatatttatatggaaataacccaaatatttgcaccaatggcaactcatgtcaaccaccaaaaaacaagagcaagctagctatctacattgttgttcctatagttctggtcctcgcgatagtatcagtgacgacactactctattgcctactgagaagaaaaaaacaagttccattcttcacgtacaaaggatcaatgaacaattctgtaaagccacaaaacgagacaatgagatatgggccaacaaataatggctccgggcataattcatcactgcggcttgagaaccgccggtttacatataatgaactggagaagataacgaacaaattccagcgagttcttggacaaggaggctttggaaaagtctatgatggcttcttggaggatggcactgaagtggcagtcaaagtgaggactgaatcttccaaccaaggtgataaggagtttcttgtagaggctcaaattttaacccggattcatcacaagaaccttgtctctatgatcggctattgtaaggatgagaaatatatggcacttgtgtatgagtacatgtcagaaggaacccttcaagaacacattgcaggaaaaggaaatgatgggagatacttaacctggaaagagaggcttcgaattgcgctggaatctgctcaagggctagagtacctacacaaagggtgcaaccctcctcttattcaccgtgatgtgaagggaaccaacattttgttgaacacgaggctagaggccaagattgctgattttggtttgtccaaggttttcaatcctgagaacggcacccatgtatctacgaacaaacttgttggcacacctggatatgtggatccagagtaccaatcaacaatgcaaccaacgactaagagtgatgtctatagctttggtgttgtcctgttggagttggtaacagggaagccagctatcttgcgtgatccagagcccatcagcatcatccattgggcacaacaacgcttagcacggggtaacattgagggtgtggtggatgcaagcatgcatggtgactacgatgtgaatggcctatggaaggttgcagacattgcactcaagtgtacggcgctttcgtcagcacaccgccccactatgaccgacgtggtggcacagttgcaagagtgcctcgagctagaggataagcaccaggttataaacaatggcttttataatggcaatagtggcgatctaaactctaacttctacaccacttaa

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Protein seq

MAARSSLFLLCLATATAGVLQARAQPDSKGFISVDCGLPGKTSYIDDKTKISYASDDGFTDGGKHYNVSPEYIKPAVTARYYNVRSFPDGARNCYTLRSLVAGLKYLIRATFMYGNYDGLNKLPVSFDLHIGVNFWTVVNITDPIQPVNREAIVVVPDDSVQVCLVNTGAGTPFISGLDLRPLMNKLYPQVNATQGLLQLARLNFGPSDETSIRVQNIDNDLFEAPTAVMQTAVTPINASNNIDFFWNSQPQPNDPAPGYIAIFHFSELENLPNNASRQFYININGILFDDGFTPSFLYAEASYSSKPFVRHPQYNITINATANSTMPPLINAVENWMGDPCLPRNLAWDNLTCSYAISNPARITSLNLSKIGLSGEISSSFGNLKALQYLYGNNPNICTNGNSCQPPKNKSKLAIYIVVPIVLVLAIVSVTTLLYCLLRRKKQVPFFTYKGSMNNSVKPQNETMRYGPTNNGSGHNSSLRLENRRFTYNELEKITNKFQRVLGQGGFGKVYDGFLEDGTEVAVKVRTESSNQGDKEFLVEAQILTRIHHKNLVSMIGYCKDEKYMALVYEYMSEGTLQEHIAGKGNDGRYLTWKERLRIALESAQGLEYLHKGCNPPLIHRDVKGTNILLNTRLEAKIADFGLSKVFNPENGTHVSTNKLVGTPGYVDPEYQSTMQPTTKSDVYSFGVVLLELVTGKPAILRDPEPISIIHWAQQRLARGNIEGVVDASMHGDYDVNGLWKVADIALKCTALSSAHRPTMTDVVAQLQECLELEDKHQVINNGFYNGNSGDLNSNFYTT

Function Probable LRR receptor-like serine/threonine-protein kinase At1g51880 [UniProtKB/Swiss-Prot:Q9FZB1]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNaBo_05g0023820 OsNaBo_05g0023820.01 Chr05 26898118 26904653 + NAM
CDS seq

atggcggcacggtcgtcgttgtttcttctctgccttgccaccgccaccgccggcgtactccaagctcgtgcccagcctgacagcaaaggtttcatcagcgtagactgcgggctcccggggaagacgagctacattgacgacaagaccaagatatcctacgcctcggacgacggattcaccgacggcggcaagcactacaacgtctcgccggagtacatcaagccggcggtcacggcgcgctactacaacgtgcgcagcttccccgacggcgcgcgcaactgctacacgctccggtcgctcgtggccggcctcaagtacctcatccgcgccaccttcatgtacggcaactacgacggcctcaacaagctgcccgtgtcgtttgacctccacatcggcgtcaacttctggacagtggtgaacatcacggacccgatccagccggtgaaccgggaggccatcgtcgtcgtgcccgacgactccgtgcaagtctgcctggtgaacaccggcgccgggacaccgttcatctccgggttggacctcaggcctcttatgaacaagctctacccgcaggtgaatgccactcagggcctactccaactcgccaggctcaacttcggcccatctgacgaaacctccatcagggttcagaacatagacaacgacctgttcgaggcgccgacggcggtgatgcagacagcggtcacgccaatcaacgcctccaacaacatcgacttcttctggaactcacagccgcagcccaacgacccagcgccagggtacatcgccatctttcacttctccgagcttgagaacctccccaacaacgcctcacggcaattctatatcaacatcaacggcatattgttcgacgatggtttcacaccatcgtttctctacgccgaggcctcctacagctccaaaccctttgtgcgacacccgcagtacaacatcaccattaacgccaccgccaactcgacgatgccgccgctcatcaacgccgttgagaattggatgggtgacccgtgcctccctagaaatcttgcgtgggataatttgacctgcagctatgccatttctaaccctgcaagaatcacgagcttaaacctgtcaaaaattggtttgagtggtgagatatcgtcctcttttgggaatctcaaggccctccaatatttatatggaaataacccaaatatttgcaccaatggcaactcatgtcaaccaccaaaaaacaagagcaagctagctatctacattgttgttcctatagttctggtcctcgcgatagtatcagtgacgacactactctattgcctactgagaagaaaaaaacaagttccattcttcacgtacaaaggatcaatgaacaattctgtaaagccacaaaacgagacaatgagatatgggccaacaaataatggctccgggcataattcatcactgcggcttgagaaccgccggtttacatataatgaactggagaagataacgaacaaattccagcgagttcttggacaaggaggctttggaaaagtctatgatggcttcttggaggatggcactgaagtggcagtcaaagtgaggactgaatcttccaaccaaggtgataaggagtttcttgtagaggctcaaattttaacccggattcatcacaagaaccttgtctctatgatcggctattgtaaggatgagaaatatatggcacttgtgtatgagtacatgtcagaaggaacccttcaagaacacattgcaggaaaaggaaatgatgggagatacttaacctggaaagagaggcttcgaattgcgctggaatctgctcaagggctagagtacctacacaaagggtgcaaccctcctcttattcaccgtgatgtgaagggaaccaacattttgttgaacacgaggctagaggccaagattgctgattttggtttgtccaaggttttcaatcctgagaacggcacccatgtatctacgaacaaacttgttggcacacctggatatgtggatccagagtaccaatcaacaatgcaaccaacgactaagagtgatgtctatagctttggtgttgtcctgttggagttggtaacagggaagccagctatcttgcgtgatccagagcccatcagcatcatccattgggcacaacaacgcttagcacggggtaacattgagggtgtggtggatgcaagcatgcatggtgactacgatgtgaatggcctatggaaggttgcagacattgcactcaagtgtacggcgctttcgtcagcacaccgccccactatgaccgacgtggtggcacagttgcaagagtgcctcgagctagaggataagcaccaggttataaacaatggcttttataatggcaatagtggcgatctaaactctaacttctacaccacttaa

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Protein seq

MAARSSLFLLCLATATAGVLQARAQPDSKGFISVDCGLPGKTSYIDDKTKISYASDDGFTDGGKHYNVSPEYIKPAVTARYYNVRSFPDGARNCYTLRSLVAGLKYLIRATFMYGNYDGLNKLPVSFDLHIGVNFWTVVNITDPIQPVNREAIVVVPDDSVQVCLVNTGAGTPFISGLDLRPLMNKLYPQVNATQGLLQLARLNFGPSDETSIRVQNIDNDLFEAPTAVMQTAVTPINASNNIDFFWNSQPQPNDPAPGYIAIFHFSELENLPNNASRQFYININGILFDDGFTPSFLYAEASYSSKPFVRHPQYNITINATANSTMPPLINAVENWMGDPCLPRNLAWDNLTCSYAISNPARITSLNLSKIGLSGEISSSFGNLKALQYLYGNNPNICTNGNSCQPPKNKSKLAIYIVVPIVLVLAIVSVTTLLYCLLRRKKQVPFFTYKGSMNNSVKPQNETMRYGPTNNGSGHNSSLRLENRRFTYNELEKITNKFQRVLGQGGFGKVYDGFLEDGTEVAVKVRTESSNQGDKEFLVEAQILTRIHHKNLVSMIGYCKDEKYMALVYEYMSEGTLQEHIAGKGNDGRYLTWKERLRIALESAQGLEYLHKGCNPPLIHRDVKGTNILLNTRLEAKIADFGLSKVFNPENGTHVSTNKLVGTPGYVDPEYQSTMQPTTKSDVYSFGVVLLELVTGKPAILRDPEPISIIHWAQQRLARGNIEGVVDASMHGDYDVNGLWKVADIALKCTALSSAHRPTMTDVVAQLQECLELEDKHQVINNGFYNGNSGDLNSNFYTT

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 1.645045 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_05g0524732 SBH 0.0 0.000000 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os05g44940 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os05g0524732 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_05g0024230 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_05g0024120 SBH 0.0 3.785832 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_05g0024100 SBH 0.0 5.074499 0.000000
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_05g0024060 SBH 0.0 1.170324 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_05g0024150 SBH 0.0 17.616816 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_05G0404100 SBH 0.0051835 0.301636 0.0027315
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_05g0023710 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_05G0416300 SBH 0.001579 0.095063 0.006649
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_05g0023890 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_05g0023790 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_05g0023970 RBH 0.0 3.469700 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_05g0024010 SBH 0.000000 0.495400 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_05g0024020 RBH 0.0 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_05G023420 RBH 0.0 0.740263 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0032080 SBH 0.0 7.636705 1.101636
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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