Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsGoSa_05g0023970 OGI:05070420 | 16/16 GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) Chr05:26976072-26982639
Gene Symbol -
DNA seq

atggcggcacggtcgtcgttgtttcttctctgcctcgccaccgccaccgccggcgtactccaagctcgtgcccagcctgacagcaaaggtacgtagtacaatcctagtatcctacctcatagtaatgcgcgcaatgcttcacaaatcaaaaagacatcaatgttcaatgaactaaaagagcatatgtttttcatgcttttgcaggtttcatcagcgtagactgcgggctcccggggaagacgagctacattgacgacaagaccaagatatcctacgcctcggacgacggattcaccgacggcggcaagcactacaacgtctcgccggagtacatcaagccggcggtcacggcgcgctactacaacgtGCGCAgcttccccgacggcgcgcgcaactgctacacgctccggtcgctcgtggccggcctcaagtacctcatccgcgccaccttcatgtacggcaactacgacggcctcaacaagctgcccgtgtcgtttgacctccacatcggcgtcaacttctggacggtggtgaacatcacggacccgatccagccggtgaaccgggaggccatcgtcgtcgtgcccgacgactccgtgcaagtctgcctggtgaacaccggcgccgggacaccgttcatctccgggttggacctcaggcctcttatgaacaagctctacccgcaggtgaacgccactcagggcctactccaactcgccaggctcaacttcggcccatctgacgaaacctccatcaggtgagctaagttaaagtttcctacgcgtatagactgtttatatttattatcatatcatttatttatactatcatcagtattaccggtgataattcaaactcgataaattttaactaaaagttagtctcacaatatagggtaattttactattcttaaaaagttatcgaaaggtatcatattttttagtgtaaaatttggtacctccaagtactaaatattttgaggtatcaaaattattggtgtaaaatcttggtatctttaggcactttatcaaatatcataaaattttccacaatatataggtttagtgatataaatagcgtaatattagattcgtatttacagatattttcatatactttttctgattaccaacatgcaaaacgaggggatatctcttaaaggatgaaatcacttttcccgataagagctagatatttagctaagagcaggtacaatagcaggctataagccagctgcaaacatattttaaggaaataaatgaggagagagaagggaagcgggctacagatttatagtcagctatagcatggactccaatacacagtgtatatgacaggtgggtccaggtactaatagtgtagtatgtaactattgtatgaataagctattagattggctatagatgaattggagctaatagttggctatactattaaacttgctctaattctctgtagataaattttacggtttttgagaaagtactaatttttaaattagaaaatatgatatcttctaatattttttttaaggatggtaaaattatctgtaggaaatgcaactgatcgattcaatggccaggtatccggatgatccgcacgacagagtatggtttccttggtttgatgcggccaagtggaacgagatatcaacgacaaacagggttcagaacatagacaacgacctgttcgaggcgccgacggcggtgatgcagacagcggtcacgccaatcaacgcctccaacaacatcgacttcttctggaactcacagccgcagcccaacgacccagcgccagggtacatcgccatctttcacTtctccgagcttgagaaccttcccaacaacgcctcacggcaattctatatcaacatcaacggcatattgttcgacgatggtttcacaccatcgtttctctacgccgaggcctcctacagctccaaaccctttgtgcgacacccgcagtacaacatcaccattaacgccaccgccaactcgacgatgccgccgctcatcaacgccgtcgaggtgtactctgtcatctccaccgctaacattggcaccgactcacaagatggtatgtgctcagggttttcaatttcgatttcatctaaaatttcagccatttcagtagaattaaaatttttaaaattttgaaaatttcagaaatttttggaccgaaattttctgaaattttgacacaatttaacagaatttgactaaattcataaaaaatttgagaaaaactgaaatatgcacatacatgagctagctgatggtcaagcatgtcatgtgcattgatgaaattttttggtgattgacagtatcagcaatcatgacgatcaaggcgaagtaccaggtgaaaaagaattggatgggtgacccgtgcctccctagaaatcttgcgtgggataatttgacctgcagctatgccatttctaaccctgcaagaatcacgagcttgtaagtaataattcattccattagccaaaAACaacatgactattgtgatgaaaaaacaaaactattacctccatcccaaataaaaagggtgcaaacgtgtatggctattgttaaactattgtaaatatgaaaattttaattgtatacacaatgcatagttaatggcttagattaaaataattaaagagaacccatcaattataacatgctaattattaatttaaagttcaaaattaaattaataaaagagatgatatacttgttgcttgtgaatttagaaattactaagttttaggatactaatgaaactaaagaggccatgcatggcagtaaaaattaattaagaccccatgttatttccaatagaattttttatttgatatgaaattttaatacaatctatggtggtcgataccaccatcaatCAccagcctgatcTtttttattattattattagcaccctcagaatgccaaatcagcacatgcataaatagcaagaggaaattaaatctaatgggagctaattaactgtgcaatgaaattgggctgatcatattctctttgcagaaacctgtcaaaaattggtttgagtggtgagatatcgtcctcttttgggaatctcaaggccatccaatatttgtatgttatgagttcatgatgtcggatgtattaacttgtttgcgtaatctgagttAaaatttggaaaatcttgctccatatcttgcagggatctatcaaacaacaacttgacaggctcgattccaaatgccctttcacagttgtcttcattgacaatcttgtaagtttggcaattcttttatcaacttttacctagagtaaagtacacggtcggtccttaaagttggagcgaggtgtcacttaggtccatgatcttgaaaaatcgacattaggatccacggtcttgtttaagtgactcattgaggtccaaaggatctctgaccgggttgactagcttatgtggccatccagagtggcaacatattttcatgtgagctcctccacatccgatccaacccttcttccccaaatcttctttcagcactggtggtgaggacgacgacgggtggctgatggtggacaacaacgatggcgcagctggtggtagacaacgacagcgatggcggacggttgaaggcgcggcgcgcgcggttgagggccgaaggagaggggagcagcggtaagggcagagggcgtcaagctccggcagctgagctctatacaagcttgaggccacggtggtggaggttggaccggcgacgactcGgggtatggtggcggcagcggctgagctcagggacgacacgaGCgagctcgccggaggtcaccctcgtgctgctacttcgtgtcgtccacgcacatctagccgggagacaacgaggggatgacgagtggtggcgattgacgcggagcaggaagcagcaacacatcaagggccaggagacAACGAggggacgtcgagagacggcggcttgcagccgtagggatctggccgcagctgggacgggatccaccggtgtgcacgccgccgcctagcgcagtgatgtccacggccttagtgcggccgtcgtcgctagatccgatggataactcgatgacatcaccgtcattgaggctctgatagttgtcgaacttgagggaggaccggtggacgaagaggtcctcgccgccattgtcgggagtgatgaagccgaacccattggtggcgtcgaaccccttcatcgtcccctcaccctctccgacaccacctcgccctcgccgccccaagtcgaaccctctaaaaccctaaaagctgcccgccgtctcgctccactggccagccgccgccaccgccctactcgcccttctccctctttgcgcatgctcgccaactcgtcgccgtacctgtctccctcctcgtcgtcactgccgccgccagcccctgcaaccgcaaaccatagaaatcacactgaaagaagatatggggaagaagggttggatcggatgcgggggaggggggcgaaatgcaaatatactactactctggacggtcacgtaagccagtcaacctggtcagaggtcctttggacctcaatgagtcacttaaacaagatcgcggaccctaatatcgatttttcaagatcatggacctaagtaacacctcgcttcaactttaaggaccgatcatgtactttactcttttacctacgtactctttagaatccttttgaactaatatcctactgtatgtcttcttttagagatttgacaggaaaccaactaaatggaacaattccgcctggacttctcaagagaattcaggatggctttttaaatctaaggtaatgacaccacattcttcttatagcagtcttcttcagcaaaaggtgcagatcaatttttcagaaaatggacataaacatatttatgtcattaatatatagatatggaaataacccaaatatttgcaccaatggcaactcatgtcaaccaccaaaaaacaagagcaagctagctatctacattgttgttcctatagttctggtcctcgcgatagtatcagtgatgacactactctattgcctactgagaagaaaaaaacaaggtgggtcttgctatcatttgtctgctctacttcatcttcttgaatactactgatgctagttccattcttcacgtacaaaggatcaatgaacaattctgtaaagccacaaaacgagacaatgagatatgggccaacaaataatggctccaggcataattcatcactgcggcttgagaaccgccggtttacatataatgaactggagaagataacgaacaaattccagcgagttcttggacaaggaggctttggaaaagtctatgatggcttcttggaggatggcactgaagtggcagtcaaagtgaggactgaatcttccaaccaaggtgataaggagtttcttgttgaggtagaattttttaagctgcactttttcttgctatgtAaaaatttctatcaagaaaagtctccatgggggcatcattaaatagacaagtttcaccactttaggctcaaattttaacccggattcatcacaagaaccttgtctctatgatcggctattgtaaggatgagaaatatatggcacttgtgtatgagtacatgtcagaaggaacccttcaagaacacattgcaggtccgaactaacttcatctaccagcttatttttttagtcctttcatgatctccaattcttatatttgcaggaaaaggaaatgatgggagatacttaacctggaaagagaggcttcgaattgcgctggaatctgctcaaggtaactacttagaatttctaatgctatttttagtttgattttacatttttttctctctctagaagcttgatcagtatttcaattacatggtgaattaatgatcagggctagagtacctacacaaagggtgcaaccctcctcttattcaccgtgatgtgaagggaaccaacattttgttgaacacgaggctagaggccaagattgctgattttggtttgtccaaggttttcaatcctgagaacggcacccatgtatctacgaacaaacttgttggcacacctggatatgtggatccagagtatgttgtctttcttgaagccccttttttaaagttcttttgttagagaaatactaattgtaagacttattgggactgaccaaatgcgtaggtaccaatcaacaatgcaaccaacgactaagagtgatgtctatagctttggtgttgtcctgttggagttggtaacagggaagccagctatcttgcgtgatccagagcccatcagcatcatccattgggcacaacaacgcttagcacggggtaacattgagggtgtggtggatgcaagcatgcatggtgactacgatgtgaatggcctatggaaggttgcagacattgcacgcaagtgtacggcgctttcgtcagcacaccgccccactatgaccgacgtggtggcacagttgcaagagtgtctcgagctagaggataagcaccaggtcagtgatataaacaatggcttttataatggcaatagtggcgatctaaactctaacttctacaccacttaa

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CDS seq

atggcggcacggtcgtcgttgtttcttctctgcctcgccaccgccaccgccggcgtactccaagctcgtgcccagcctgacagcaaaggtttcatcagcgtagactgcgggctcccggggaagacgagctacattgacgacaagaccaagatatcctacgcctcggacgacggattcaccgacggcggcaagcactacaacgtctcgccggagtacatcaagccggcggtcacggcgcgctactacaacgtGCGCAgcttccccgacggcgcgcgcaactgctacacgctccggtcgctcgtggccggcctcaagtacctcatccgcgccaccttcatgtacggcaactacgacggcctcaacaagctgcccgtgtcgtttgacctccacatcggcgtcaacttctggacggtggtgaacatcacggacccgatccagccggtgaaccgggaggccatcgtcgtcgtgcccgacgactccgtgcaagtctgcctggtgaacaccggcgccgggacaccgttcatctccgggttggacctcaggcctcttatgaacaagctctacccgcaggtgaacgccactcagggcctactccaactcgccaggctcaacttcggcccatctgacgaaacctccatcagggttcagaacatagacaacgacctgttcgaggcgccgacggcggtgatgcagacagcggtcacgccaatcaacgcctccaacaacatcgacttcttctggaactcacagccgcagcccaacgacccagcgccagggtacatcgccatctttcacTtctccgagcttgagaaccttcccaacaacgcctcacggcaattctatatcaacatcaacggcatattgttcgacgatggtttcacaccatcgtttctctacgccgaggcctcctacagctccaaaccctttgtgcgacacccgcagtacaacatcaccattaacgccaccgccaactcgacgatgccgccgctcatcaacgccgtcgagaattggatgggtgacccgtgcctccctagaaatcttgcgtgggataatttgacctgcagctatgccatttctaaccctgcaagaatcacgagcttaaacctgtcaaaaattggtttgagtggtgagatatcgtcctcttttgggaatctcaaggccatccaatatttatatggaaataacccaaatatttgcaccaatggcaactcatgtcaaccaccaaaaaacaagagcaagctagctatctacattgttgttcctatagttctggtcctcgcgatagtatcagtgatgacactactctattgcctactgagaagaaaaaaacaagttccattcttcacgtacaaaggatcaatgaacaattctgtaaagccacaaaacgagacaatgagatatgggccaacaaataatggctccaggcataattcatcactgcggcttgagaaccgccggtttacatataatgaactggagaagataacgaacaaattccagcgagttcttggacaaggaggctttggaaaagtctatgatggcttcttggaggatggcactgaagtggcagtcaaagtgaggactgaatcttccaaccaaggtgataaggagtttcttgttgaggctcaaattttaacccggattcatcacaagaaccttgtctctatgatcggctattgtaaggatgagaaatatatggcacttgtgtatgagtacatgtcagaaggaacccttcaagaacacattgcaggaaaaggaaatgatgggagatacttaacctggaaagagaggcttcgaattgcgctggaatctgctcaagggctagagtacctacacaaagggtgcaaccctcctcttattcaccgtgatgtgaagggaaccaacattttgttgaacacgaggctagaggccaagattgctgattttggtttgtccaaggttttcaatcctgagaacggcacccatgtatctacgaacaaacttgttggcacacctggatatgtggatccagagtaccaatcaacaatgcaaccaacgactaagagtgatgtctatagctttggtgttgtcctgttggagttggtaacagggaagccagctatcttgcgtgatccagagcccatcagcatcatccattgggcacaacaacgcttagcacggggtaacattgagggtgtggtggatgcaagcatgcatggtgactacgatgtgaatggcctatggaaggttgcagacattgcacgcaagtgtacggcgctttcgtcagcacaccgccccactatgaccgacgtggtggcacagttgcaagagtgtctcgagctagaggataagcaccaggtcagtgatataaacaatggcttttataatggcaatagtggcgatctaaactctaacttctacaccacttaa

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Protein seq

MAARSSLFLLCLATATAGVLQARAQPDSKGFISVDCGLPGKTSYIDDKTKISYASDDGFTDGGKHYNVSPEYIKPAVTARYYNVRSFPDGARNCYTLRSLVAGLKYLIRATFMYGNYDGLNKLPVSFDLHIGVNFWTVVNITDPIQPVNREAIVVVPDDSVQVCLVNTGAGTPFISGLDLRPLMNKLYPQVNATQGLLQLARLNFGPSDETSIRVQNIDNDLFEAPTAVMQTAVTPINASNNIDFFWNSQPQPNDPAPGYIAIFHFSELENLPNNASRQFYININGILFDDGFTPSFLYAEASYSSKPFVRHPQYNITINATANSTMPPLINAVENWMGDPCLPRNLAWDNLTCSYAISNPARITSLNLSKIGLSGEISSSFGNLKAIQYLYGNNPNICTNGNSCQPPKNKSKLAIYIVVPIVLVLAIVSVMTLLYCLLRRKKQVPFFTYKGSMNNSVKPQNETMRYGPTNNGSRHNSSLRLENRRFTYNELEKITNKFQRVLGQGGFGKVYDGFLEDGTEVAVKVRTESSNQGDKEFLVEAQILTRIHHKNLVSMIGYCKDEKYMALVYEYMSEGTLQEHIAGKGNDGRYLTWKERLRIALESAQGLEYLHKGCNPPLIHRDVKGTNILLNTRLEAKIADFGLSKVFNPENGTHVSTNKLVGTPGYVDPEYQSTMQPTTKSDVYSFGVVLLELVTGKPAILRDPEPISIIHWAQQRLARGNIEGVVDASMHGDYDVNGLWKVADIARKCTALSSAHRPTMTDVVAQLQECLELEDKHQVSDINNGFYNGNSGDLNSNFYTT

Function Probable LRR receptor-like serine/threonine-protein kinase At1g51880 [UniProtKB/Swiss-Prot:Q9FZB1]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsGoSa_05g0023970 OsGoSa_05g0023970.01 Chr05 26976072 26982639 + NAM
CDS seq

atggcggcacggtcgtcgttgtttcttctctgcctcgccaccgccaccgccggcgtactccaagctcgtgcccagcctgacagcaaaggtttcatcagcgtagactgcgggctcccggggaagacgagctacattgacgacaagaccaagatatcctacgcctcggacgacggattcaccgacggcggcaagcactacaacgtctcgccggagtacatcaagccggcggtcacggcgcgctactacaacgtGCGCAgcttccccgacggcgcgcgcaactgctacacgctccggtcgctcgtggccggcctcaagtacctcatccgcgccaccttcatgtacggcaactacgacggcctcaacaagctgcccgtgtcgtttgacctccacatcggcgtcaacttctggacggtggtgaacatcacggacccgatccagccggtgaaccgggaggccatcgtcgtcgtgcccgacgactccgtgcaagtctgcctggtgaacaccggcgccgggacaccgttcatctccgggttggacctcaggcctcttatgaacaagctctacccgcaggtgaacgccactcagggcctactccaactcgccaggctcaacttcggcccatctgacgaaacctccatcagggttcagaacatagacaacgacctgttcgaggcgccgacggcggtgatgcagacagcggtcacgccaatcaacgcctccaacaacatcgacttcttctggaactcacagccgcagcccaacgacccagcgccagggtacatcgccatctttcacTtctccgagcttgagaaccttcccaacaacgcctcacggcaattctatatcaacatcaacggcatattgttcgacgatggtttcacaccatcgtttctctacgccgaggcctcctacagctccaaaccctttgtgcgacacccgcagtacaacatcaccattaacgccaccgccaactcgacgatgccgccgctcatcaacgccgtcgagaattggatgggtgacccgtgcctccctagaaatcttgcgtgggataatttgacctgcagctatgccatttctaaccctgcaagaatcacgagcttaaacctgtcaaaaattggtttgagtggtgagatatcgtcctcttttgggaatctcaaggccatccaatatttatatggaaataacccaaatatttgcaccaatggcaactcatgtcaaccaccaaaaaacaagagcaagctagctatctacattgttgttcctatagttctggtcctcgcgatagtatcagtgatgacactactctattgcctactgagaagaaaaaaacaagttccattcttcacgtacaaaggatcaatgaacaattctgtaaagccacaaaacgagacaatgagatatgggccaacaaataatggctccaggcataattcatcactgcggcttgagaaccgccggtttacatataatgaactggagaagataacgaacaaattccagcgagttcttggacaaggaggctttggaaaagtctatgatggcttcttggaggatggcactgaagtggcagtcaaagtgaggactgaatcttccaaccaaggtgataaggagtttcttgttgaggctcaaattttaacccggattcatcacaagaaccttgtctctatgatcggctattgtaaggatgagaaatatatggcacttgtgtatgagtacatgtcagaaggaacccttcaagaacacattgcaggaaaaggaaatgatgggagatacttaacctggaaagagaggcttcgaattgcgctggaatctgctcaagggctagagtacctacacaaagggtgcaaccctcctcttattcaccgtgatgtgaagggaaccaacattttgttgaacacgaggctagaggccaagattgctgattttggtttgtccaaggttttcaatcctgagaacggcacccatgtatctacgaacaaacttgttggcacacctggatatgtggatccagagtaccaatcaacaatgcaaccaacgactaagagtgatgtctatagctttggtgttgtcctgttggagttggtaacagggaagccagctatcttgcgtgatccagagcccatcagcatcatccattgggcacaacaacgcttagcacggggtaacattgagggtgtggtggatgcaagcatgcatggtgactacgatgtgaatggcctatggaaggttgcagacattgcacgcaagtgtacggcgctttcgtcagcacaccgccccactatgaccgacgtggtggcacagttgcaagagtgtctcgagctagaggataagcaccaggtcagtgatataaacaatggcttttataatggcaatagtggcgatctaaactctaacttctacaccacttaa

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Protein seq

MAARSSLFLLCLATATAGVLQARAQPDSKGFISVDCGLPGKTSYIDDKTKISYASDDGFTDGGKHYNVSPEYIKPAVTARYYNVRSFPDGARNCYTLRSLVAGLKYLIRATFMYGNYDGLNKLPVSFDLHIGVNFWTVVNITDPIQPVNREAIVVVPDDSVQVCLVNTGAGTPFISGLDLRPLMNKLYPQVNATQGLLQLARLNFGPSDETSIRVQNIDNDLFEAPTAVMQTAVTPINASNNIDFFWNSQPQPNDPAPGYIAIFHFSELENLPNNASRQFYININGILFDDGFTPSFLYAEASYSSKPFVRHPQYNITINATANSTMPPLINAVENWMGDPCLPRNLAWDNLTCSYAISNPARITSLNLSKIGLSGEISSSFGNLKAIQYLYGNNPNICTNGNSCQPPKNKSKLAIYIVVPIVLVLAIVSVMTLLYCLLRRKKQVPFFTYKGSMNNSVKPQNETMRYGPTNNGSRHNSSLRLENRRFTYNELEKITNKFQRVLGQGGFGKVYDGFLEDGTEVAVKVRTESSNQGDKEFLVEAQILTRIHHKNLVSMIGYCKDEKYMALVYEYMSEGTLQEHIAGKGNDGRYLTWKERLRIALESAQGLEYLHKGCNPPLIHRDVKGTNILLNTRLEAKIADFGLSKVFNPENGTHVSTNKLVGTPGYVDPEYQSTMQPTTKSDVYSFGVVLLELVTGKPAILRDPEPISIIHWAQQRLARGNIEGVVDASMHGDYDVNGLWKVADIARKCTALSSAHRPTMTDVVAQLQECLELEDKHQVSDINNGFYNGNSGDLNSNFYTT

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 3.469700 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_05g0524732 RBH 0.0 0.000000 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os05g44940 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os05g0524732 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_05g0024230 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_05g0024120 SBH 0.0 3.785832 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_05g0024100 SBH 0.0 5.074499 0.000000
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_05g0024060 SBH 0.0 1.170324 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_05g0024150 SBH 0.0 17.616816 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_05G0404100 SBH 0.0051835 0.301636 0.0027315
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_05g0023710 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_05G0416300 SBH 0.001579 0.095063 0.006649
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_05g0023890 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_05g0023790 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0032030 SBH 0.0 12.814388 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_05g0023990 RBH 0.0 0.120936 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_05g0024020 RBH 0.0 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_05G023420 RBH 0.0 0.740263 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_05g0023820 RBH 0.0 1.645045 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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