Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_02g0024920 | OGI:02001240 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr02:26175456-26179572 | ||||||||
| Gene Symbol | LP2, OsLP2 | ||||||||||
| DNA seq | agcatccaacattccaactcgaaagtatacctaccacctggcaaacttgagcagacccggctgccgttttatgcgctccggccgaacaaaggtgcgctattctatctgctggtaatgtttccgctctggcttcatgccttcagatgcttgccgtttttaccgttgagggtgaattgtgcgcatgtgacaaaagttattcaaaccgttatgctttaaatgacggtagttatttctttcatttgatcaagcgttccgttatgagggatttaaggccttctcaaaaacatcacattgaatctttggacacatgtatgaaacattaaatatagataaaaagaaaaactaattgtatagtttgcatataaatcgtgagacgaatcttttgagcctaattgtgctaacgacggattaattaggctagttatgaaattagttttttcattcgtatcgaaaaacccctttcgacatccagtcaaacgtccgatgtgacacccaaaaattttatttcgccagctaaacaaggcctaagtttaccaccatattttttttaaaaactcaagtttaccgaagttagagagtgcatttggcctgtctacctaccccacccccccaaaaaaaaaccctttctttcctttgtttcctctaatctccagggatcctgtacagtgttttcacatacttaatataagcacatcctaccgaggtttAaaaaaaaagagtgcatttcgttgcacaaagtaggtccattcggcggtgataattaatggtaggtaacaattaatctttatgcttcattctttttaaactttgcaggaaaagtcacctatgtcgaccaatcatccggtgaaactcgccatgcttatgcttttagcattattgttgttgtcttatggagttggcagcatccgttgcgcaacggccacagacaacagcacggatatgtcatcgttgctcgaattcaagaaggccatcaatgatccaacgggggcattgaacagttggagcacggtcgttccccattgccagtggatgggtgttaattgtagccgaaggcatgccggccgagtcacggcactcaaccttgctgcccaaggcttgtcgggttcgattcccgcctctgtgggaaacctgacattccttcgtacacttgacctgtccagtaataacttcttcggccagatgccccatcttaacaatctccagaagatgcaaatccttaacctgagctataattcattagatggcataataccagacacactcaccaattgttccagcctcaaggaattacatctctatcataacactctaaggagtgaaattccaaggaacataggtctccttactaatctagttttgttggcccttaacagtaacaatcttaccggttccatccctcaatctgtcggtaacattacccatttagataaaatctatcttgagttgaatcaacttgcaggaaacattcccgaagaacttggccaattttctaatattacagtgctgggcctaggggataataggctatcgggaattataccagccagcctttttaatttgtcctctcttcaaactctagaattgagtgcaaatcagttaggtgggactctaccaactaacatgggtgatcatctcactaatctccaaatactctacgtgagcaacaacatgctcgaaggtcatatcccagcttccttaggcaatgcttcgatgctacgagaaatagttttccaatttaataatttcactggtcagattcctacctcctttggaaaactttcaacgttgattaaattagaccttcaggcaaacaagttcgaagcaaatgatagtgaaagctgggcattcttgcaggctttgggaaactgcagtgaactagatattttatcaatatctagaaatcaactacagggagtcataccagattcgattggtaacctaccaacaaatattacgagtatagcattgggaggaaataaactgtctggtacagttccaccaagcatagggaacctctctaggttaattcaattgggactggatgtaaacagtctcagtggtgagattggtccatggattggaaacctgaaaaaactacaatctttaagtcttaataacaacaacttcaccgggcccattccaccatctattggcgatttttcggggttgacagcactatatttgcaatcaaacggttttgaaagtgccataccgcaaaacataggaaacctcggaaaacttttagagttagaccttagttataataacctccaaggcaacattcctctagaaatcggcaaccttaaacagctcatcagcatctctctttctgcaaacaaacttaccggggaaattcctggcaccttggtccaatgctatggtttacaacacattaaaatggacaaaaacttactcacaggaagcattccagtatccttcggcaacctaacgagcttgactgcactcaatctttcatataactacttgtctggcaccattccaagagctctaggtgatctacaacagcttaatgagctggatctttcgcacaatcacctccaaggggaaataccgacaaatgggatcttcaaaaatgctaatgctgtttcacttggggacaactggggtctctgtggtggagtactcgatcctcacacaccctcatgcccaagggcatctcggaaaatcagtatacagtattacttgattagagtgctgatcccaatatttggcttcatgtcactcgtactattggtctactttttattccttgtaaagaaggtgccgacaagcaagtttttgcagtcctcttttggagagtatttcctcaaagtttcctacaacgatctagctgaagccacaaaaaatttctcgcaatcaagcctgattgggaaaggaacctacggttcagtgtataaagggacgttaaaggaatcaaaagtactagtagctgtgaaagttttcaatctggagatgcgaggcgcggagagaagtttcttagcagaatgtgaagcactgagaagcattcaacaccgaaacctccttcccataataactgcatgctcgacggtagatcatacaggcaatgttttcaaagctctagtttatgaattcatgcctaatgggaacctagacacttggttgcatcataaaggagatgggaaagatccaaaacatttaggtctagctgaaaggataaacatagctgttaacatagctgatgcgttggactacctacaccacgattgcggaagacccactgtccactgtgatttgaagcctagcaacattcttctaaatgaagacatggatgctcttctaggagacttcggcattgcaaggttttatgttgattctcacttggcatcgccaggttcgattagctccataggtgtgaaggggacaataggatatatcgctccaggtaagtagcatatccgtctctattcccactgtacttttcaacacagccaaatgtttgttaccatggctgaattcgtgttcctgttacttttcagagtatgcacagggtggtcatgcatcaatttctggggatgtttatagttttgggatagtgttattagagatgatgacaggtaaaagaccgacagatccaatgtttaccgacggactcgaccttgtcaggttcgtggaggacaactttccgcatgaaatacaccatgtcatcgatgctcatctcagagaagagtgcagggtgttagcggaagcaaatacggtatcagaaagtgtgatccatcaatgcctggtgtctttgctacaaatagcactttcctgcgcgcatgcattaccaagcgagcgaatgaatatgaaagttgcagccagcaaaatgcatgcaatcaacacgtcatggcttggatggaaatccaagaagtaaagaaagtgtgtttcaatggagagacatgttactttgtatttagtagttagtacattaatttttctacttgtacttgtgtttattaccaaggtatttccaatgatagacatattacatgttatgtttatttaatatcacatagataccaacttataaactatttacgtaatgatatcataagtggaatcaaataataaatttctccatcaatctctcttattt
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| CDS seq | atgcgctccggccgaacaaaggaaaagtcacctatgtcgaccaatcatccggtgaaactcgccatgcttatgcttttagcattattgttgttgtcttatggagttggcagcatccgttgcgcaacggccacagacaacagcacggatatgtcatcgttgctcgaattcaagaaggccatcaatgatccaacgggggcattgaacagttggagcacggtcgttccccattgccagtggatgggtgttaattgtagccgaaggcatgccggccgagtcacggcactcaaccttgctgcccaaggcttgtcgggttcgattcccgcctctgtgggaaacctgacattccttcgtacacttgacctgtccagtaataacttcttcggccagatgccccatcttaacaatctccagaagatgcaaatccttaacctgagctataattcattagatggcataataccagacacactcaccaattgttccagcctcaaggaattacatctctatcataacactctaaggagtgaaattccaaggaacataggtctccttactaatctagttttgttggcccttaacagtaacaatcttaccggttccatccctcaatctgtcggtaacattacccatttagataaaatctatcttgagttgaatcaacttgcaggaaacattcccgaagaacttggccaattttctaatattacagtgctgggcctaggggataataggctatcgggaattataccagccagcctttttaatttgtcctctcttcaaactctagaattgagtgcaaatcagttaggtgggactctaccaactaacatgggtgatcatctcactaatctccaaatactctacgtgagcaacaacatgctcgaaggtcatatcccagcttccttaggcaatgcttcgatgctacgagaaatagttttccaatttaataatttcactggtcagattcctacctcctttggaaaactttcaacgttgattaaattagaccttcaggcaaacaagttcgaagcaaatgatagtgaaagctgggcattcttgcaggctttgggaaactgcagtgaactagatattttatcaatatctagaaatcaactacagggagtcataccagattcgattggtaacctaccaacaaatattacgagtatagcattgggaggaaataaactgtctggtacagttccaccaagcatagggaacctctctaggttaattcaattgggactggatgtaaacagtctcagtggtgagattggtccatggattggaaacctgaaaaaactacaatctttaagtcttaataacaacaacttcaccgggcccattccaccatctattggcgatttttcggggttgacagcactatatttgcaatcaaacggttttgaaagtgccataccgcaaaacataggaaacctcggaaaacttttagagttagaccttagttataataacctccaaggcaacattcctctagaaatcggcaaccttaaacagctcatcagcatctctctttctgcaaacaaacttaccggggaaattcctggcaccttggtccaatgctatggtttacaacacattaaaatggacaaaaacttactcacaggaagcattccagtatccttcggcaacctaacgagcttgactgcactcaatctttcatataactacttgtctggcaccattccaagagctctaggtgatctacaacagcttaatgagctggatctttcgcacaatcacctccaaggggaaataccgacaaatgggatcttcaaaaatgctaatgctgtttcacttggggacaactggggtctctgtggtggagtactcgatcctcacacaccctcatgcccaagggcatctcggaaaatcagtatacagtattacttgattagagtgctgatcccaatatttggcttcatgtcactcgtactattggtctactttttattccttgtaaagaaggtgccgacaagcaagtttttgcagtcctcttttggagagtatttcctcaaagtttcctacaacgatctagctgaagccacaaaaaatttctcgcaatcaagcctgattgggaaaggaacctacggttcagtgtataaagggacgttaaaggaatcaaaagtactagtagctgtgaaagttttcaatctggagatgcgaggcgcggagagaagtttcttagcagaatgtgaagcactgagaagcattcaacaccgaaacctccttcccataataactgcatgctcgacggtagatcatacaggcaatgttttcaaagctctagtttatgaattcatgcctaatgggaacctagacacttggttgcatcataaaggagatgggaaagatccaaaacatttaggtctagctgaaaggataaacatagctgttaacatagctgatgcgttggactacctacaccacgattgcggaagacccactgtccactgtgatttgaagcctagcaacattcttctaaatgaagacatggatgctcttctaggagacttcggcattgcaaggttttatgttgattctcacttggcatcgccaggttcgattagctccataggtgtgaaggggacaataggatatatcgctccagagtatgcacagggtggtcatgcatcaatttctggggatgtttatagttttgggatagtgttattagagatgatgacaggtaaaagaccgacagatccaatgtttaccgacggactcgaccttgtcaggttcgtggaggacaactttccgcatgaaatacaccatgtcatcgatgctcatctcagagaagagtgcagggtgttagcggaagcaaatacggtatcagaaagtgtgatccatcaatgcctggtgtctttgctacaaatagcactttcctgcgcgcatgcattaccaagcgagcgaatgaatatgaaagttgcagccagcaaaatgcatgcaatcaacacgtcatggcttggatggaaatccaagaagtaa
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| Protein seq | MRSGRTKEKSPMSTNHPVKLAMLMLLALLLLSYGVGSIRCATATDNSTDMSSLLEFKKAINDPTGALNSWSTVVPHCQWMGVNCSRRHAGRVTALNLAAQGLSGSIPASVGNLTFLRTLDLSSNNFFGQMPHLNNLQKMQILNLSYNSLDGIIPDTLTNCSSLKELHLYHNTLRSEIPRNIGLLTNLVLLALNSNNLTGSIPQSVGNITHLDKIYLELNQLAGNIPEELGQFSNITVLGLGDNRLSGIIPASLFNLSSLQTLELSANQLGGTLPTNMGDHLTNLQILYVSNNMLEGHIPASLGNASMLREIVFQFNNFTGQIPTSFGKLSTLIKLDLQANKFEANDSESWAFLQALGNCSELDILSISRNQLQGVIPDSIGNLPTNITSIALGGNKLSGTVPPSIGNLSRLIQLGLDVNSLSGEIGPWIGNLKKLQSLSLNNNNFTGPIPPSIGDFSGLTALYLQSNGFESAIPQNIGNLGKLLELDLSYNNLQGNIPLEIGNLKQLISISLSANKLTGEIPGTLVQCYGLQHIKMDKNLLTGSIPVSFGNLTSLTALNLSYNYLSGTIPRALGDLQQLNELDLSHNHLQGEIPTNGIFKNANAVSLGDNWGLCGGVLDPHTPSCPRASRKISIQYYLIRVLIPIFGFMSLVLLVYFLFLVKKVPTSKFLQSSFGEYFLKVSYNDLAEATKNFSQSSLIGKGTYGSVYKGTLKESKVLVAVKVFNLEMRGAERSFLAECEALRSIQHRNLLPIITACSTVDHTGNVFKALVYEFMPNGNLDTWLHHKGDGKDPKHLGLAERINIAVNIADALDYLHHDCGRPTVHCDLKPSNILLNEDMDALLGDFGIARFYVDSHLASPGSISSIGVKGTIGYIAPEYAQGGHASISGDVYSFGIVLLEMMTGKRPTDPMFTDGLDLVRFVEDNFPHEIHHVIDAHLREECRVLAEANTVSESVIHQCLVSLLQIALSCAHALPSERMNMKVAASKMHAINTSWLGWKSKK |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0024920 | OsNaBo_02g0024920.02 | Chr02 | 26175456 | 26179570 | + | NAM | ||
| CDS seq | atgcgctccggccgaacaaaggaaaagtcacctatgtcgaccaatcatccggtgaaactcgccatgcttatgcttttagcattattgttgttgtcttatggagttggcagcatccgttgcgcaacggccacagacaacagcacggatatgtcatcgttgctcgaattcaagaaggccatcaatgatccaacgggggcattgaacagttggagcacggtcgttccccattgccagtggatgggtgttaattgtagccgaaggcatgccggccgagtcacggcactcaaccttgctgcccaaggcttgtcgggttcgattcccgcctctgtgggaaacctgacattccttcgtacacttgacctgtccagtaataacttcttcggccagatgccccatcttaacaatctccagaagatgcaaatccttaacctgagctataattcattagatggcataataccagacacactcaccaattgttccagcctcaaggaattacatctctatcataacactctaaggagtgaaattccaaggaacataggtctccttactaatctagttttgttggcccttaacagtaacaatcttaccggttccatccctcaatctgtcggtaacattacccatttagataaaatctatcttgagttgaatcaacttgcaggaaacattcccgaagaacttggccaattttctaatattacagtgctgggcctaggggataataggctatcgggaattataccagccagcctttttaatttgtcctctcttcaaactctagaattgagtgcaaatcagttaggtgggactctaccaactaacatgggtgatcatctcactaatctccaaatactctacgtgagcaacaacatgctcgaaggtcatatcccagcttccttaggcaatgcttcgatgctacgagaaatagttttccaatttaataatttcactggtcagattcctacctcctttggaaaactttcaacgttgattaaattagaccttcaggcaaacaagttcgaagcaaatgatagtgaaagctgggcattcttgcaggctttgggaaactgcagtgaactagatattttatcaatatctagaaatcaactacagggagtcataccagattcgattggtaacctaccaacaaatattacgagtatagcattgggaggaaataaactgtctggtacagttccaccaagcatagggaacctctctaggttaattcaattgggactggatgtaaacagtctcagtggtgagattggtccatggattggaaacctgaaaaaactacaatctttaagtcttaataacaacaacttcaccgggcccattccaccatctattggcgatttttcggggttgacagcactatatttgcaatcaaacggttttgaaagtgccataccgcaaaacataggaaacctcggaaaacttttagagttagaccttagttataataacctccaaggcaacattcctctagaaatcggcaaccttaaacagctcatcagcatctctctttctgcaaacaaacttaccggggaaattcctggcaccttggtccaatgctatggtttacaacacattaaaatggacaaaaacttactcacaggaagcattccagtatccttcggcaacctaacgagcttgactgcactcaatctttcatataactacttgtctggcaccattccaagagctctaggtgatctacaacagcttaatgagctggatctttcgcacaatcacctccaaggggaaataccgacaaatgggatcttcaaaaatgctaatgctgtttcacttggggacaactggggtctctgtggtggagtactcgatcctcacacaccctcatgcccaagggcatctcggaaaatcagtatacagtattacttgattagagtgctgatcccaatatttggcttcatgtcactcgtactattggtctactttttattccttgtaaagaaggtgccgacaagcaagtttttgcagtcctcttttggagagtatttcctcaaagtttcctacaacgatctagctgaagccacaaaaaatttctcgcaatcaagcctgattgggaaaggaacctacggttcagtgtataaagggacgttaaaggaatcaaaagtactagtagctgtgaaagttttcaatctggagatgcgaggcgcggagagaagtttcttagcagaatgtgaagcactgagaagcattcaacaccgaaacctccttcccataataactgcatgctcgacggtagatcatacaggcaatgttttcaaagctctagtttatgaattcatgcctaatgggaacctagacacttggttgcatcataaaggagatgggaaagatccaaaacatttaggtctagctgaaaggataaacatagctgttaacatagctgatgcgttggactacctacaccacgattgcggaagacccactgtccactgtgatttgaagcctagcaacattcttctaaatgaagacatggatgctcttctaggagacttcggcattgcaaggttttatgttgattctcacttggcatcgccaggttcgattagctccataggtgtgaaggggacaataggatatatcgctccagagtatgcacagggtggtcatgcatcaatttctggggatgtttatagttttgggatagtgttattagagatgatgacaggtaaaagaccgacagatccaatgtttaccgacggactcgaccttgtcaggttcgtggaggacaactttccgcatgaaatacaccatgtcatcgatgctcatctcagagaagagtgcagggtgttagcggaagcaaatacggtatcagaaagtgtgatccatcaatgcctggtgtctttgctacaaatagcactttcctgcgcgcatgcattaccaagcgagcgaatgaatatgaaagttgcagccagcaaaatgcatgcaatcaacacgtcatggcttggatggaaatccaagaagtaa
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| Protein seq | MRSGRTKEKSPMSTNHPVKLAMLMLLALLLLSYGVGSIRCATATDNSTDMSSLLEFKKAINDPTGALNSWSTVVPHCQWMGVNCSRRHAGRVTALNLAAQGLSGSIPASVGNLTFLRTLDLSSNNFFGQMPHLNNLQKMQILNLSYNSLDGIIPDTLTNCSSLKELHLYHNTLRSEIPRNIGLLTNLVLLALNSNNLTGSIPQSVGNITHLDKIYLELNQLAGNIPEELGQFSNITVLGLGDNRLSGIIPASLFNLSSLQTLELSANQLGGTLPTNMGDHLTNLQILYVSNNMLEGHIPASLGNASMLREIVFQFNNFTGQIPTSFGKLSTLIKLDLQANKFEANDSESWAFLQALGNCSELDILSISRNQLQGVIPDSIGNLPTNITSIALGGNKLSGTVPPSIGNLSRLIQLGLDVNSLSGEIGPWIGNLKKLQSLSLNNNNFTGPIPPSIGDFSGLTALYLQSNGFESAIPQNIGNLGKLLELDLSYNNLQGNIPLEIGNLKQLISISLSANKLTGEIPGTLVQCYGLQHIKMDKNLLTGSIPVSFGNLTSLTALNLSYNYLSGTIPRALGDLQQLNELDLSHNHLQGEIPTNGIFKNANAVSLGDNWGLCGGVLDPHTPSCPRASRKISIQYYLIRVLIPIFGFMSLVLLVYFLFLVKKVPTSKFLQSSFGEYFLKVSYNDLAEATKNFSQSSLIGKGTYGSVYKGTLKESKVLVAVKVFNLEMRGAERSFLAECEALRSIQHRNLLPIITACSTVDHTGNVFKALVYEFMPNGNLDTWLHHKGDGKDPKHLGLAERINIAVNIADALDYLHHDCGRPTVHCDLKPSNILLNEDMDALLGDFGIARFYVDSHLASPGSISSIGVKGTIGYIAPEYAQGGHASISGDVYSFGIVLLEMMTGKRPTDPMFTDGLDLVRFVEDNFPHEIHHVIDAHLREECRVLAEANTVSESVIHQCLVSLLQIALSCAHALPSERMNMKVAASKMHAINTSWLGWKSKK
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0024920 | OsNaBo_02g0024920.01 | Chr02 | 26175456 | 26179570 | + | NAM | ||
| CDS seq | atgcgctccggccgaacaaaggaaaagtcacctatgtcgaccaatcatccggtgaaactcgccatgcttatgcttttagcattattgttgttgtcttatggagttggcagcatccgttgcgcaacggccacagacaacagcacggatatgtcatcgttgctcgaattcaagaaggccatcaatgatccaacgggggcattgaacagttggagcacggtcgttccccattgccagtggatgggtgttaattgtagccgaaggcatgccggccgagtcacggcactcaaccttgctgcccaaggcttgtcgggttcgattcccgcctctgtgggaaacctgacattccttcgtacacttgacctgtccagtaataacttcttcggccagatgccccatcttaacaatctccagaagatgcaaatccttaacctgagctataattcattagatggcataataccagacacactcaccaattgttccagcctcaaggaattacatctctatcataacactctaaggagtgaaattccaaggaacataggtctccttactaatctagttttgttggcccttaacagtaacaatcttaccggttccatccctcaatctgtcggtaacattacccatttagataaaatctatcttgagttgaatcaacttgcaggaaacattcccgaagaacttggccaattttctaatattacagtgctgggcctaggggataataggctatcgggaattataccagccagcctttttaatttgtcctctcttcaaactctagaattgagtgcaaatcagttaggtgggactctaccaactaacatgggtgatcatctcactaatctccaaatactctacgtgagcaacaacatgctcgaaggtcatatcccagcttccttaggcaatgcttcgatgctacgagaaatagttttccaatttaataatttcactggtcagattcctacctcctttggaaaactttcaacgttgattaaattagaccttcaggcaaacaagttcgaagcaaatgatagtgaaagctgggcattcttgcaggctttgggaaactgcagtgaactagatattttatcaatatctagaaatcaactacagggagtcataccagattcgattggtaacctaccaacaaatattacgagtatagcattgggaggaaataaactgtctggtacagttccaccaagcatagggaacctctctaggttaattcaattgggactggatgtaaacagtctcagtggtgagattggtccatggattggaaacctgaaaaaactacaatctttaagtcttaataacaacaacttcaccgggcccattccaccatctattggcgatttttcggggttgacagcactatatttgcaatcaaacggttttgaaagtgccataccgcaaaacataggaaacctcggaaaacttttagagttagaccttagttataataacctccaaggcaacattcctctagaaatcggcaaccttaaacagctcatcagcatctctctttctgcaaacaaacttaccggggaaattcctggcaccttggtccaatgctatggtttacaacacattaaaatggacaaaaacttactcacaggaagcattccagtatccttcggcaacctaacgagcttgactgcactcaatctttcatataactacttgtctggcaccattccaagagctctaggtgatctacaacagcttaatgagctggatctttcgcacaatcacctccaaggggaaataccgacaaatgggatcttcaaaaatgctaatgctgtttcacttggggacaactggggtctctgtggtggagtactcgatcctcacacaccctcatgcccaagggcatctcggaaaatcagtatacagtattacttgattagagtgctgatcccaatatttggcttcatgtcactcgtactattggtctactttttattccttgtaaagaaggtgccgacaagcaagtttttgcagtcctcttttggagagtatttcctcaaagtttcctacaacgatctagctgaagccacaaaaaatttctcgcaatcaagcctgattgggaaaggaacctacggttcagtgtataaagggacgttaaaggaatcaaaagtactagtagctgtgaaagttttcaatctggagatgcgaggcgcggagagaagtttcttagcagaatgtgaagcactgagaagcattcaacaccgaaacctccttcccataataactgcatgctcgacggtagatcatacaggcaatgttttcaaagctctagtttatgaattcatgcctaatgggaacctagacacttggttgcatcataaaggagatgggaaagatccaaaacatttaggtctagctgaaaggataaacatagctgttaacatagctgatgcgttggactacctacaccacgattgcggaagacccactgtccactgtgatttgaagcctagcaacattcttctaaatgaagacatggatgctcttctaggagacttcggcattgcaaggttttatgttgattctcacttggcatcgccaggttcgattagctccataggtgtgaaggggacaataggatatatcgctccaggtaagtag
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| Protein seq | MRSGRTKEKSPMSTNHPVKLAMLMLLALLLLSYGVGSIRCATATDNSTDMSSLLEFKKAINDPTGALNSWSTVVPHCQWMGVNCSRRHAGRVTALNLAAQGLSGSIPASVGNLTFLRTLDLSSNNFFGQMPHLNNLQKMQILNLSYNSLDGIIPDTLTNCSSLKELHLYHNTLRSEIPRNIGLLTNLVLLALNSNNLTGSIPQSVGNITHLDKIYLELNQLAGNIPEELGQFSNITVLGLGDNRLSGIIPASLFNLSSLQTLELSANQLGGTLPTNMGDHLTNLQILYVSNNMLEGHIPASLGNASMLREIVFQFNNFTGQIPTSFGKLSTLIKLDLQANKFEANDSESWAFLQALGNCSELDILSISRNQLQGVIPDSIGNLPTNITSIALGGNKLSGTVPPSIGNLSRLIQLGLDVNSLSGEIGPWIGNLKKLQSLSLNNNNFTGPIPPSIGDFSGLTALYLQSNGFESAIPQNIGNLGKLLELDLSYNNLQGNIPLEIGNLKQLISISLSANKLTGEIPGTLVQCYGLQHIKMDKNLLTGSIPVSFGNLTSLTALNLSYNYLSGTIPRALGDLQQLNELDLSHNHLQGEIPTNGIFKNANAVSLGDNWGLCGGVLDPHTPSCPRASRKISIQYYLIRVLIPIFGFMSLVLLVYFLFLVKKVPTSKFLQSSFGEYFLKVSYNDLAEATKNFSQSSLIGKGTYGSVYKGTLKESKVLVAVKVFNLEMRGAERSFLAECEALRSIQHRNLLPIITACSTVDHTGNVFKALVYEFMPNGNLDTWLHHKGDGKDPKHLGLAERINIAVNIADALDYLHHDCGRPTVHCDLKPSNILLNEDMDALLGDFGIARFYVDSHLASPGSISSIGVKGTIGYIAPGK
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0024920 | OsNaBo_02g0024920.03 | Chr02 | 26178080 | 26179572 | + | IsoSeq | ||
| CDS seq | atgcctggtgtctttgctacaaatagcactttcctgcgcgcatgcattaccaagcgagcgaatgaatatgaaagttgcagccagcaaaatgcatgcaatcaacacgtcatggcttggatggaaatccaagaagtaaagaaagtgtgtttcaatggagagacatgttactttgtatttagt |
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| Protein seq | MPGVFATNSTFLRACITKRANEYESCSQQNACNQHVMAWMEIQEVKKVCFNGETCYFVFS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr02 | 26176269 | 26179570 | + | OsNaBo_02g0024920.01 | OsNaBo_02g0024920.02,OsNaBo_02g0024920.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 25.746614 | 14.415323 | 25.192261 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0615400 | SBH | 1.810530 | 3.247144 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g40180 | SBH | 1.164243 | 0.429848 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0615400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0024890 | SBH | 0.266269 | 0.551824 | 0.649657 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0025040 | SBH | 0.095130 | 0.000000 | 0.117828 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0025070 | RBH | 29.182781 | 0.0 | 25.728716 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0024690 | SBH | 3.492460 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0024790 | RBH | 46.889832 | 0.0 | 65.571045 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0396500 | SBH | 0.7189395 | 0.971307 | 0.895161 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0024560 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0425400 | SBH | 1.672875 | 0.3362355 | 3.077142 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0024850 | SBH | 25.960310 | 0.035675 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0024660 | SBH | 4.461609 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0024970 | SBH | 68.361366 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0024690 | RBH | 0.035031 | 0.082412 | 0.021348 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0024430 | SBH | 7.177341 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G025070 | SBH | 8.670583 | 0.434185 | 11.337581 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0024900 | SBH | 21.950468 | 8.298501 | 18.806587 |
