Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_07G022630 | OGI:01077750 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr07:24856744-24857072 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCTCTTGCCACTATTGTAAGTTGTGATCCAACACGCAGAGTTGGAGGTGTTGAGCTAGGAAATGAATTTTTAATGGTTCATGTCGATCTTGCATTGGCAAAATCCGAAGATTTGATTAGGCCATACAAAGGCTACAAAATTGTTGGTCATGTTGTAGGACTTAAAATTGCGTGGCCTGCAATTTTCGTATGTTCCTATCTCTTACTTCTTACTTCGGAGATGTGCTTTTCGTCTTCATAATGGTATATTAATGCTTATATATTTTTTCTATTATAGGTTGACAAGATAAATGGGTGAAGATGTGGGGGAAATTTCGTGACTGCCAG |
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| CDS seq | ATGGCTCTTGCCACTATTGTAAGTTGTGATCCAACACGCAGAGTTGGAGGTGTTGAGCTAGGAAATGAATTTTTAATGGTTCATGTCGATCTTGCATTGGCAAAATCCGAAGATTTGATTAGGCCATACAAAGGCTACAAAATTGTTGGTCATGTTGTAGGACTTAAAATTGCGTGGCCTGCAATTTTCGTTGACAAGATAAATGGGTGA |
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| Protein seq | MALATIVSCDPTRRVGGVELGNEFLMVHVDLALAKSEDLIRPYKGYKIVGHVVGLKIAWPAIFVDKING |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_07G022630 | OsN22_07G022630_01 | Chr07 | 24856744 | 24857072 | + | NAM | ||
| CDS seq | ATGGCTCTTGCCACTATTGTAAGTTGTGATCCAACACGCAGAGTTGGAGGTGTTGAGCTAGGAAATGAATTTTTAATGGTTCATGTCGATCTTGCATTGGCAAAATCCGAAGATTTGATTAGGCCATACAAAGGCTACAAAATTGTTGGTCATGTTGTAGGACTTAAAATTGCGTGGCCTGCAATTTTCGTTGACAAGATAAATGGGTGA
More
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| Protein seq | MALATIVSCDPTRRVGGVELGNEFLMVHVDLALAKSEDLIRPYKGYKIVGHVVGLKIAWPAIFVDKING |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.512635 | 4.929079 | 6.489412 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0340800 | RBH | 5.174430 | 5.893974 | 1.033047 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g28010 | SBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0013370 | RBH | 3.477286 | 17.315722 | 16.015589 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0009420 | RBH | 0.256556 | 0.0 | 1.061764 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0013270 | RBH | 8.266968 | 4.813106 | 22.449795 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0013580 | SBH | 2.241811 | 0.274552 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0009030 | RBH | 10.648417 | 3.396509 | 9.711478 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0140200 | RBH | 8.170796 | 65.6157875 | 68.633514 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0008150 | RBH | 1.303406 | 0.170754 | 1.803121 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0128000 | RBH | 0 | 1.5344105 | 0.0168805 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0008580 | RBH | 1.528968 | 0.495998 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0012230 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0004930 | RBH | 11.888258 | 31.335684 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0008800 | RBH | 1.283354 | 0.000000 | 0.581337 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0009120 | RBH | 1.191648 | 1.392729 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0022680 | RBH | 0.0 | 0.0 | 0.0 |
