Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_09g0004930 | OGI:01077750 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr09:8804166-8804650 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | cacatcttgttgcccccattctccaccttgcagccatcatcattccgtgacatgtacaggtgacctagttgcgtactagcagtcacgaaattttccccacatcttcacccatttatcttgtcaacctataatagaaaaaatatataagcattaatataccattatgaagacgaaaagcacatctccgaagtaagaagtaagagataggaacatacAaaaattgcaggccacgcaatttcaagtcctacaacatgaccaacaattttgtagcctttgtatggcctaatcaaatcttcggattttgccaatgcaagatcgacatgaaccattaaaaattcatttcctagctcaacacctccaactctgcgtgttggatcacagcttacaatagtggcaagagccacgtttgtattccgatttttccaactttttaagaatactttagttccaacctgaagtgcataaatacatccatcaatattatc
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| CDS seq | gataatattgatggatgtatttatgcacttcaggttggaactaaagtattcttaaaaagttggaaaaatcggaatacaaacgtggctcttgccactattgtaagctgtgatccaacacgcagagttggaggtgttgagctaggaaatgaatttttaatggttcatgtcgatcttgcattggcaaaatccgaagatttgattaggccatacaaaggctacaaaattgttggtcatgttgtaggacttgaaattgcgtggcctgcaattttTgttgacaagataaatgggtga |
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| Protein seq | DNIDGCIYALQVGTKVFLKSWKNRNTNVALATIVSCDPTRRVGGVELGNEFLMVHVDLALAKSEDLIRPYKGYKIVGHVVGLEIAWPAIFVDKING |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_09g0004930 | OsGoSa_09g0004930.01 | Chr09 | 8804166 | 8804650 | - | NAM | ||
| CDS seq | gataatattgatggatgtatttatgcacttcaggttggaactaaagtattcttaaaaagttggaaaaatcggaatacaaacgtggctcttgccactattgtaagctgtgatccaacacgcagagttggaggtgttgagctaggaaatgaatttttaatggttcatgtcgatcttgcattggcaaaatccgaagatttgattaggccatacaaaggctacaaaattgttggtcatgttgtaggacttgaaattgcgtggcctgcaattttTgttgacaagataaatgggtga
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| Protein seq | DNIDGCIYALQVGTKVFLKSWKNRNTNVALATIVSCDPTRRVGGVELGNEFLMVHVDLALAKSEDLIRPYKGYKIVGHVVGLEIAWPAIFVDKING |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 11.888258 | 31.335684 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g28010 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0008770 | SBH | 5.201477 | 7.930246 | 20.901375 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0140200 | RBH | 8.170796 | 65.6157875 | 68.633514 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0128000 | RBH | 0 | 1.5344105 | 0.0168805 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0008580 | SBH | 1.528968 | 0.495998 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0012230 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0001580 | RBH | 18.149158 | 62.964188 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0009120 | SBH | 1.191648 | 1.392729 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G022630 | RBH | 0.512635 | 4.929079 | 6.489412 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0004910 | RBH | 0.0 | 0.0 | 0.0 |
