Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_12G0369100 | OGI:12069410 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr12:26077142-26080271 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GACTGAATATATGTGTGTCATAAATTGCAAGAAAACAAATCCCCATAATGTATCCAAGGTAAAATTCTAATAGATTAATGTAAAATTGTAATAGATGCACTAAATTCTAAACTCCAACTGCAATTGCCAGCAAACAATATAAACTTCCAATTGTCAGCAACAGTAACAGGAAGGCACATGAATAGGTTGCTCTAGGTCCAAGGGAGACTTGGGTACCTACAAAAAGTACAATTGGTAGCCCACATGTTAATACTGCATGCATAATATGGTTTACATTTTCATAGTACATTCTATTCAGATTAAGAACAATGTTAAAAACTGACAGGGATGCTGCAGTACAATGAGGTTCTATTAAAAAGGACAGAAGCACAGAGGTGAGCTACTCTAGTCTACATTTCATCAAAGCAATAAGTAGAAGCTAACCTACTAGAATTCTTGTTGAAAATAAAAATGGAAGCTATGTGCAGGAACTCATCCTATAAAATCAAATCATCTAAAAAAAACATAGCTACACAATGCCTGAGTAATCTGAATAATATACCACAAGTCCACATCAGCTTACCAAACAAGGTTCCATCAGGACTCCATATACAAATATTTGTCTTTACCTGCATGTGCGCAAACAAAGAGAAATACTAGAGTTATGCACATAACATAAACACACCAAACTCAAACCATTTGTACACAACATGAAACATCAACTTACTCTTCTCGCTTTGCCTCTGGACAACAACGAATGTCATGGCCTGGTTGGCGACAACGACTGCACAATCTTGGCCAATGCTCATCCCATCCTTTCATTCTCCTAGGTGCACCTTTGGTGGCTACACAGATGGGATCTAAAACAGATCCTTCAGGCCTATGTGATGTTTCACCAACCTCGTCAACATGCGTGTGCTTCTTGGTTGCTGCATTAGAAGAACTTATTTTTGATAGTTGACTCTCCATGTATTCTTTCACCTCCCCAAACAACTCACGACTATTAGATGCCAAGTCAAAAAGTTCGGACCCTCGAGCATTCAATTCATAATAATTCTTTTGTTTCTCTGTCCAAACATGCAAATCACTTTTTCGAACAGAAGGAAGACCGGCTTTTGCATTCTTCGATAGGCGCTGCAGCACACAACACTTTGGGATTTCCTTCACCTCCAGATGCTTCAATACTGAGAGAATATGCTTGCAAGGGATCCCTTCACGCTCCATCTTTCGGCAACTGCACCTAATATCATGGTTTCCTCCAATGCGAGTGTAATCAATATAGCATTTTCTCGCACTTTTTTGCTCAGATGTCACCATGTACCTCTCACCCTTACCATCTGGTACTACATCAACATGGAGACCATCTAACTTCTGAAGCTCCTTTTGAACTAGATCAAAATTTGCAGATGTGAAAATATGCCCTGCAGGCTCTTCGATTTCAGGACTATCAGTGATAGTAGCATGCCATGATTGAGATGCTTTCGAATCAAACTCAGCCTCTTTTTCACGCAATTCAAAAACACATACCTCATAATGCTCTACTAAATCAAGCAAAGACATGTAATAGTCTAGATGCCTATGAAGGCATGAATTCAAGCTCTCACTCCTCTGGTTGCTTTTCATGCCCAAAAAATATGTGTTAGTCAAGAAAGCAGCTGCCCACAATTTCCTCTTTCTATACATCCTTTTCAACCAACCCTTGTTTCTAGAGGTTCTGTACTTTAAAACAAAACTACTCCACTTTTCTTCAAATTCAGCATGTGAGCAGGCATCATATATAAAGGACCTGAATATCTTTATTTGTGAGAAATGGAGGTGCTTACTGATACCTCTCTCGATATGCCACGAGCATACACGATGGTCGGTATCTGGGAGCACTTGGCGGATTGCTTTCATCATTGCATTATCGCTGTCCGTTATTATAGACCTTGGTTTCTGCTGGCACATTGCTCTCAAGAACACCTGAAGCAACCAAGTATAAGATTCAACACACTCGTCGGACACAATACCACAAGCAAAAATAGTGGTTTGACGATGGTGGTTGAGCCCAACAAAGGGAATAAATGGCATGTTATATTTGTTCATCCTTTGTGTGCTATCAAACACAACAACATCACCGAACGATTGATAGTCCATGCGAGACTGAGCATCACTCCAAAACAGATTTTTCAGACGACCTTCATCATCAACTTGGTACTCATAGAAAAAATCAGGATCCTTGTCCCGCCTTTTCTTCATAAGTTCTAAAGTTGCACTTGCATCACCTTCCAAAATTCTAGACCTCTTATACCTTGATGAATAATTGTACAAGTCCTTTTTGACAAATCCCACCTTATCGTATCCTCCATACTTGCACTTCATGACCTTCATTATGACATTTTTCCGAATACCAATAGATTCTAGTGAATGTATTTCAGATTTTTGGAAGTCCTTAATTTTCCTATGAGACCGAAGAAATGGAGTCTCGTCGTGGCTCGTCAATGGGTGGTTATGCTCATCAGTAAAATTGTCTACAAACCAGATACCACGTTTCTTATCAAGCTTGATGCTAAGACTAGCAGGGCATTCCATTCGAGTCAACGCTCTTTCCCTTCTTACACGATCCTCAGGTTTTACCAAACTAGGATCTCGAATCCCCTCCTTAGAGCAAACAAAACGCCTGTATCCGATGGCTCCAACTCTTTTTTCACGCCTCACAATATCCTTCCTCACACTAAAACCTTTCCTTTTAGCATAACTATTGTAGAAGTTGTAACATTCATCTTCAGTCTGAAAATTCATTTGAACTATATTCCAGTACTCATCTAGAGCTACATAATCTTCCTCAACGCTGTGGAACACATTGTGACTGCTACTAGGATCATTAGGCTGAGATTTATTGTGGTCTCCCTATTATAAAAAAAAGTATTTAACCCCAATACTATGAGCTAACGTGATAGAAATCTAAACTACAACATGTATAAATAATTGCATAAATCCAACAAATAAATGATAAGCGAGTATGGACATGTGCAGATAGTGAACTAACCAAGGAACATTCAGCATAGTCATCATCATTTGTATTGGACGAATTGTCCATGTACGAATCAGTTGAACAATCCTTGCCACATTTAGCATCATCTTCATTGCCTGTGCCACGAAACTCACCCAT
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| CDS seq | ATGGGTGAGTTTCGTGGCACAGGCAATGAAGATGATGCTAAATGTGGCAAGGATTGTTCAACTGATTCGTACATGGACAATTCGTCCAATACAAATGATGATGACTATGCTGAATGTTCCTTGGGAGACCACAATAAATCTCAGCCTAATGATCCTAGTAGCAGTCACAATGTGTTCCACAGCGTTGAGGAAGATTATGTAGCTCTAGATGAGTACTGGAATATAGTTCAAATGAATTTTCAGACTGAAGATGAATGTTACAACTTCTACAATAGTTATGCTAAAAGGAAAGGTTTTAGTGTGAGGAAGGATATTGTGAGGCGTGAAAAAAGAGTTGGAGCCATCGGATACAGGCGTTTTGTTTGCTCTAAGGAGGGGATTCGAGATCCTAGTTTGGTAAAACCTGAGGATCGTGTAAGAAGGGAAAGAGCGTTGACTCGAATGGAATGCCCTGCTAGTCTTAGCATCAAGCTTGATAAGAAACGTGGTATCTGGTTTGTAGACAATTTTACTGATGAGCATAACCACCCATTGACGAGCCACGACGAGACTCCATTTCTTCGGTCTCATAGGAAAATTAAGGACTTCCAAAAATCTGAAATACATTCACTAGAATCTATTGGTATTCGGAAAAATGTCATAATGAAGGTCATGAAGTGCAAGTATGGAGGATACGATAAGGTGGGATTTGTCAAAAAGGACTTGTACAATTATTCATCAAGGTATAAGAGGTCTAGAATTTTGGAAGGTGATGCAAGTGCAACTTTAGAACTTATGAAGAAAAGGCGGGACAAGGATCCTGATTTTTTCTATGAGTACCAAGTTGATGATGAAGGTCGTCTGAAAAATCTGTTTTGGAGTGATGCTCAGTCTCGCATGGACTATCAATCGTTCGGTGATGTTGTTGTGTTTGATAGCACACAAAGGATGAACAAATATAACATGCCATTTATTCCCTTTGTTGGGCTCAACCACCATCGTCAAACCACTATTTTTGCTTGTGGTATTGTGTCCGACGAGTGTGTTGAATCTTATACTTGGTTGCTTCAGGTGTTCTTGAGAGCAATGTGCCAGCAGAAACCAAGGTCTATAATAACGGACAGCGATAATGCAATGATGAAAGCAATCCGCCAAGTGCTCCCAGATACCGACCATCGTGTATGCTCGTGGCATATCGAGAGAGGTATCAGTAAGCACCTCCATTTCTCACAAATAAAGATATTCAGGTCCTTTATATATGATGCCTGCTCACATGCTGAATTTGAAGAAAAGTGGAGTAGTTTTGTTTTAAAGTACAGAACCTCTAGAAACAAGGGTTGGTTGAAAAGGATGTATAGAAAGAGGAAATTGTGGGCAGCTGCTTTCTTGACTAACACATATTTTTTGGGCATGAAAAGCAACCAGAGGAGTGAGAGCTTGAATTCATGCCTTCATAGGCATCTAGACTATTACATGTCTTTGCTTGATTTAGTAGAGCATTATGAGGTATGTGTTTTTGAATTGCGTGAAAAAGAGGCTGAGTTTGATTCGAAAGCATCTCAATCATGGCATGCTACTATCACTGATAGTCCTGAAATCGAAGAGCCTGCAGGGCATATTTTCACATCTGCAAATTTTGATCTAGTTCAAAAGGAGCTTCAGAAGTTAGATGGTCTCCATGTTGATGTAGTACCAGATGGTAAGGGTGAGAGGTACATGGTGACATCTGAGCAAAAAAGTGCGAGAAAATGCTATATTGATTACACTCGCATTGGAGGAAACCATGATATTAGGTGCAGTTGCCGAAAGATGGAGCGTGAAGGGATCCCTTGCAAGCATATTCTCTCAGTATTGAAGCATCTGGAGGTGAAGGAAATCCCAAAGTGTTGTGTGCTGCAGCGCCTATCGAAGAATGCAAAAGCCGGTCTTCCTTCTGTTCGAAAAAGTGATTTGCATGTTTGGACAGAGAAACAAAAGAATTATTATGAATTGAATGCTCGAGGGTCCGAACTTTTTGACTTGGCATCTAATAGTCGTGAGTTGTTTGGGGAGGTGAAAGAATACATGGAGAGTCAACTATCAAAAATAAGTTCTTCTAATGCAGCAACCAAGAAGCACACGCATGTTGACGAGGTTGGTGAAACATCACATAGGCCTGAAGGATCTGTTTTAGATCCCATCTGTGTAGCCACCAAAGGTGCACCTAGGAGAATGAAAGGATGGGATGAGCATTGGCCAAGATTGTGCAGTCGTTGTCGCCAACCAGGCCATGACATTCGTTGTTGTCCAGAGGCAAAGCGAGAAGAGTAA
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| Protein seq | MGEFRGTGNEDDAKCGKDCSTDSYMDNSSNTNDDDYAECSLGDHNKSQPNDPSSSHNVFHSVEEDYVALDEYWNIVQMNFQTEDECYNFYNSYAKRKGFSVRKDIVRREKRVGAIGYRRFVCSKEGIRDPSLVKPEDRVRRERALTRMECPASLSIKLDKKRGIWFVDNFTDEHNHPLTSHDETPFLRSHRKIKDFQKSEIHSLESIGIRKNVIMKVMKCKYGGYDKVGFVKKDLYNYSSRYKRSRILEGDASATLELMKKRRDKDPDFFYEYQVDDEGRLKNLFWSDAQSRMDYQSFGDVVVFDSTQRMNKYNMPFIPFVGLNHHRQTTIFACGIVSDECVESYTWLLQVFLRAMCQQKPRSIITDSDNAMMKAIRQVLPDTDHRVCSWHIERGISKHLHFSQIKIFRSFIYDACSHAEFEEKWSSFVLKYRTSRNKGWLKRMYRKRKLWAAAFLTNTYFLGMKSNQRSESLNSCLHRHLDYYMSLLDLVEHYEVCVFELREKEAEFDSKASQSWHATITDSPEIEEPAGHIFTSANFDLVQKELQKLDGLHVDVVPDGKGERYMVTSEQKSARKCYIDYTRIGGNHDIRCSCRKMEREGIPCKHILSVLKHLEVKEIPKCCVLQRLSKNAKAGLPSVRKSDLHVWTEKQKNYYELNARGSELFDLASNSRELFGEVKEYMESQLSKISSSNAATKKHTHVDEVGETSHRPEGSVLDPICVATKGAPRRMKGWDEHWPRLCSRCRQPGHDIRCCPEAKREE |
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| Function | Protein FAR1-RELATED SEQUENCE 5 [UniProtKB/Swiss-Prot:Q9SZL8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_12G0369100 | OsMH63_12T0369100.1 | Chr12 | 26077142 | 26080271 | - | maker | ||
| CDS seq | ATGGGTGAGTTTCGTGGCACAGGCAATGAAGATGATGCTAAATGTGGCAAGGATTGTTCAACTGATTCGTACATGGACAATTCGTCCAATACAAATGATGATGACTATGCTGAATGTTCCTTGGGAGACCACAATAAATCTCAGCCTAATGATCCTAGTAGCAGTCACAATGTGTTCCACAGCGTTGAGGAAGATTATGTAGCTCTAGATGAGTACTGGAATATAGTTCAAATGAATTTTCAGACTGAAGATGAATGTTACAACTTCTACAATAGTTATGCTAAAAGGAAAGGTTTTAGTGTGAGGAAGGATATTGTGAGGCGTGAAAAAAGAGTTGGAGCCATCGGATACAGGCGTTTTGTTTGCTCTAAGGAGGGGATTCGAGATCCTAGTTTGGTAAAACCTGAGGATCGTGTAAGAAGGGAAAGAGCGTTGACTCGAATGGAATGCCCTGCTAGTCTTAGCATCAAGCTTGATAAGAAACGTGGTATCTGGTTTGTAGACAATTTTACTGATGAGCATAACCACCCATTGACGAGCCACGACGAGACTCCATTTCTTCGGTCTCATAGGAAAATTAAGGACTTCCAAAAATCTGAAATACATTCACTAGAATCTATTGGTATTCGGAAAAATGTCATAATGAAGGTCATGAAGTGCAAGTATGGAGGATACGATAAGGTGGGATTTGTCAAAAAGGACTTGTACAATTATTCATCAAGGTATAAGAGGTCTAGAATTTTGGAAGGTGATGCAAGTGCAACTTTAGAACTTATGAAGAAAAGGCGGGACAAGGATCCTGATTTTTTCTATGAGTACCAAGTTGATGATGAAGGTCGTCTGAAAAATCTGTTTTGGAGTGATGCTCAGTCTCGCATGGACTATCAATCGTTCGGTGATGTTGTTGTGTTTGATAGCACACAAAGGATGAACAAATATAACATGCCATTTATTCCCTTTGTTGGGCTCAACCACCATCGTCAAACCACTATTTTTGCTTGTGGTATTGTGTCCGACGAGTGTGTTGAATCTTATACTTGGTTGCTTCAGGTGTTCTTGAGAGCAATGTGCCAGCAGAAACCAAGGTCTATAATAACGGACAGCGATAATGCAATGATGAAAGCAATCCGCCAAGTGCTCCCAGATACCGACCATCGTGTATGCTCGTGGCATATCGAGAGAGGTATCAGTAAGCACCTCCATTTCTCACAAATAAAGATATTCAGGTCCTTTATATATGATGCCTGCTCACATGCTGAATTTGAAGAAAAGTGGAGTAGTTTTGTTTTAAAGTACAGAACCTCTAGAAACAAGGGTTGGTTGAAAAGGATGTATAGAAAGAGGAAATTGTGGGCAGCTGCTTTCTTGACTAACACATATTTTTTGGGCATGAAAAGCAACCAGAGGAGTGAGAGCTTGAATTCATGCCTTCATAGGCATCTAGACTATTACATGTCTTTGCTTGATTTAGTAGAGCATTATGAGGTATGTGTTTTTGAATTGCGTGAAAAAGAGGCTGAGTTTGATTCGAAAGCATCTCAATCATGGCATGCTACTATCACTGATAGTCCTGAAATCGAAGAGCCTGCAGGGCATATTTTCACATCTGCAAATTTTGATCTAGTTCAAAAGGAGCTTCAGAAGTTAGATGGTCTCCATGTTGATGTAGTACCAGATGGTAAGGGTGAGAGGTACATGGTGACATCTGAGCAAAAAAGTGCGAGAAAATGCTATATTGATTACACTCGCATTGGAGGAAACCATGATATTAGGTGCAGTTGCCGAAAGATGGAGCGTGAAGGGATCCCTTGCAAGCATATTCTCTCAGTATTGAAGCATCTGGAGGTGAAGGAAATCCCAAAGTGTTGTGTGCTGCAGCGCCTATCGAAGAATGCAAAAGCCGGTCTTCCTTCTGTTCGAAAAAGTGATTTGCATGTTTGGACAGAGAAACAAAAGAATTATTATGAATTGAATGCTCGAGGGTCCGAACTTTTTGACTTGGCATCTAATAGTCGTGAGTTGTTTGGGGAGGTGAAAGAATACATGGAGAGTCAACTATCAAAAATAAGTTCTTCTAATGCAGCAACCAAGAAGCACACGCATGTTGACGAGGTTGGTGAAACATCACATAGGCCTGAAGGATCTGTTTTAGATCCCATCTGTGTAGCCACCAAAGGTGCACCTAGGAGAATGAAAGGATGGGATGAGCATTGGCCAAGATTGTGCAGTCGTTGTCGCCAACCAGGCCATGACATTCGTTGTTGTCCAGAGGCAAAGCGAGAAGAGTAA
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| Protein seq | MGEFRGTGNEDDAKCGKDCSTDSYMDNSSNTNDDDYAECSLGDHNKSQPNDPSSSHNVFHSVEEDYVALDEYWNIVQMNFQTEDECYNFYNSYAKRKGFSVRKDIVRREKRVGAIGYRRFVCSKEGIRDPSLVKPEDRVRRERALTRMECPASLSIKLDKKRGIWFVDNFTDEHNHPLTSHDETPFLRSHRKIKDFQKSEIHSLESIGIRKNVIMKVMKCKYGGYDKVGFVKKDLYNYSSRYKRSRILEGDASATLELMKKRRDKDPDFFYEYQVDDEGRLKNLFWSDAQSRMDYQSFGDVVVFDSTQRMNKYNMPFIPFVGLNHHRQTTIFACGIVSDECVESYTWLLQVFLRAMCQQKPRSIITDSDNAMMKAIRQVLPDTDHRVCSWHIERGISKHLHFSQIKIFRSFIYDACSHAEFEEKWSSFVLKYRTSRNKGWLKRMYRKRKLWAAAFLTNTYFLGMKSNQRSESLNSCLHRHLDYYMSLLDLVEHYEVCVFELREKEAEFDSKASQSWHATITDSPEIEEPAGHIFTSANFDLVQKELQKLDGLHVDVVPDGKGERYMVTSEQKSARKCYIDYTRIGGNHDIRCSCRKMEREGIPCKHILSVLKHLEVKEIPKCCVLQRLSKNAKAGLPSVRKSDLHVWTEKQKNYYELNARGSELFDLASNSRELFGEVKEYMESQLSKISSSNAATKKHTHVDEVGETSHRPEGSVLDPICVATKGAPRRMKGWDEHWPRLCSRCRQPGHDIRCCPEAKREE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0.0179285 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g32140 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0014470 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0014640 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0022340 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0021200 | RBH | 8.679755 | 0.000000 | 8.569613 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0110900 | RBH | 0.034475 | 0.0809475 | 0.00911 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0287300 | RBH | 0.45946 | 0.213316 | 0.2996655 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0021330 | SBH | 0.739325 | 0.734068 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0021560 | RBH | 0.475122 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0021460 | SBH | 3.148910 | 6.365159 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0014310 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G019200 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0020970 | RBH | 4.721482 | 28.809404 | 13.199014 |
