Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKYG_12g0021560 | OGI:12069410 | 16/16 | KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | Chr12:26345037-26349604 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CCATCCCACGAGCAAGCAGGCAGCAAGGGCTACCCACCCGCTCGACCGGAAGCGTCGCCGCGGCAGGTGCACGGGCTACCGCCGGTGGACATCGCCGCTGCCGCAGGAGTCGTCGTCGCCACCACAGTAGGGGCACGTCGCCAACGCCGCCCCCCGCGCCCGTTGCCGCCGCCGCTGGAGTCGTCGCCGCCGCCACAGGAGTCAACCGCTGTCGCAAGTGCACGTCGCCCCTGCCGCCGTGGGGGCATGTCGCCAACGCTGCCCCCGCGCCCGTCGCCAACGCCGCTGGTGCCGTCGCCGCCGTTGCAGGTGCTCGTCGCCCCTGCCGCCGACTCCTGTGATTTTATCGCTGTTGTAGAGGTAGACTGTTGTGATTTAATTGTGCCGATTTTTGTTTGACTGGATTTGAGTACTGAGAATGAATTGTGAAATTTTCTTTATAGACAAACTTTTTATGGGTGAAGATATGGCAGACAATTTCAGGACCCTTGAGGAGGAAGAGGAGTACCGTACGATTACTGCTATGAGATTCAAGACTGAGGATGACGGCTTCAAGTTCTACAATAGGTATGTGAAAGAAAAGGGATTCAGTGTAAGGAAGAATTTTGCTAGGCGTGATCCTGTGACAGCTGTTGTTGTGTTTAGGCAGTATACTTGCTCTAGAGAAGGCTATAGGAAAGATATATATATATATGGACACGACTAACATAAGTAGAGAACCTAGAGCACTGACACGATGCGGCTGCAATGCTCGTTTTGAGATTAGACTGGACAAAAAGAAGGGTGATTGGATTGTAGTTAAGTATGTGGCTAAGCATAATCATAATTTAGCTAAACCAGATGAAGTTGCCTTTTTACGGTCTCACAGAAACATTAGTGATGCTCAAAAGGCAATTGTGATGGAGTTGAGAGATGTTGGTTTGCGTCAGAATCAAGTAATGGATGTCATGGAGAGGCGTCATGGTGGGTTTGAATCAACTAGTTTCATGAGTAGGGACCTTTATAATTATTTTAATAGAATGAAGAAGAAACAAATCTTAGGTGGAGATGCAGATCATGTTATAAAGTATATGCAAGCAAGGCAGAAAGATGACATGGAGTATTTCTTTGAGTATGAGACAGATGAGGCCGGTCGTTTGAAAAGGTTGTTTTGGTCAGACCCTCAATCTCGGATTGATTATGACGCGTTTGGGGATGTTAACCTTCCTTTCATCCCTTTTGTCGGTGTTAACCACCATGGTTCGACAGTCATATTTGCATGTGCTATCGTTGCAGACGAGAAAGTTGCAACCTATGAATGGATCCTGAAGCAGTTTTTGGATTGCATGTGTCAAAAACACCCGAAAGGACTGATCACAGATGGAGATAATGCGATGCGCAGAGCAATTGCATCTGTGATGCCACATTCAGAGCATCGGTTGTGCACATGGCATATAGAACAGAATATTGTTAGACATCTCAGTCCAGCCATGCTTTCAGATTTTCGATCACTTGTTCACTCTACGTATGGTCCATAAGAGTTTGAGAAAAAATGGGTGGAGTTCAAGGTTGTTCATAAAGTGGGCGAAGACAACCAATGGCTTATGAGAATGTACAATTTGAGGAAGAAATGGGCAGCTGCTTATACTAAAGGTATGTTTTTTCTAGGAATGAAAAGCAACCAACGTAGTGAAAGTCTAAACTCTAAACTCCATAGGTGTTTGGATCGTAAATTCAGCTTGGTCCTATTGGTGGAGCATTTTGAACATTGTTTATCGTGTATGAGACATAGGGAGGCCAAGCTGGATTTGAAAGCTTCGCAGTCAGTCCCATTCACAAGTAATGAAGCAAGTTTAATTGAAAAAGATGCCGCCTGCTTATTTACACCTTCAATATTCAAGAAGGTGAAGATTGAGATTAGTAAATCAATTGATTGGGAAGTGATAGACTATATTGATGAGGATACAGTACATAGGTATGTCATTTGCCTGAAAGACAATCCTGACAAGGTTAAGATTTTGAATTGTAATTATGAGGACTCAATTTTGAAGACATTGAGTTGCCCATGCAGAAAATTGGAGTGCGAGAGCCTTCCATGTCATCACATTTTTGCTGTACTGTTTCATTTGAAGTTGGATGCCATTCCTAAATTCTGCGTAGAGCGCAGGTGGACTGTTCAAGCAAAAAATGTTTTCCCTTCTGATAGGTATGGTGAAGCATATACATGGTCAGACCAGATGGAAAGGTATCGTAGGCTTCGCAGCTTCGGTTCTGAAGTTCTTTTGAAGTGCTCGATGTCCAAGGAATGTACTTTGAAGGTGATGGAAATGCTGGAACAGTTGGACATAGAAACTGAAGGTTGCGAGCAAAAGGATATATATTTGACCTTGCATGGTCATGTTGTAGCTCAAAGTTTACGTACAGACATTGCTTCACGGGATTTGGTGCATGATCCAATGGAAATTGTGCCTAAGGGTGCTCCCACTAAAAGATTGAGAGGATTCATGGAGAAGCGTGTCAGGCGTTGTGGTTATTGCCGCCAAGCTGGTCACACAATTCGTTGTTGCCCAATATACCTAAGGTAAAATTGTATGAATTATCTTCCATTCGTCTATTTCATTATAGGCTATTAGATTTTGCAATCATGTCTCTTAAGTTGTTTTGTCATTCGTACAATTTCAGGAAAGTAGAAGAAGATGTGTGAGATGGATAAGAAGTAGAAGCAGCCCTTTGCTATGCACTTTACATAGTTTTGTCATGCTCTTGGTCGTAATGAATACATTGGACTGTAATGAATCTTGATGTGCTTTCCTGTAGTATGATGGATGTACTGCTATTTTGAGTTGTGCTCGCATGGTTGAATTTTGATGTGTTTTACTGTATGTGAACATGGTGTATGAGAATCTGAAAATTATGTGTTTTGGTGCTGGTGCGTTCTGGAATTGAAGATATGTTTGATGTATTGCAATTTGGTGCGCTAAATTGTTTACTTTGTGAGTATGAAGTTGTGCTAGCAAATTTGGTAACACTGAGCCAATATTGCTTGATATGCTTGAGACTGACAGCCGGATGGTTCTAATTTATTTGAGATTTGAGAAAAAAATATTTTTTTTCATTCATGTCCGAGAAACCCTTCCGACATCCGGTCAAACATCCGATGTGACATCCAAAAATTTTCTTTTCGCGATCTAAACAGGCCCTAAATGCTGAACCATATATAGTTTTTCCATCCATATTTGCCGAACAGAAAAATCATAGCAAGTCAGTATATAGCCGAACAGATAATCATTGTTCATCCCTTCATACTTTTGACAACTGGGAAGGAGTATATATTGGCATATAAGAAATTGATGTTCATCCATGACATTACAGACTAATTAAGAACATTAAAACTTAGGCCTTAGCATAACAGCACATATTGTTCAGGAGATTACATCATAATAACTTAGGATGGCAGTACATAGTGCCAGACAAAATTGGTGATGTTCGGCCATCACACTAATTAAGAACATGGATAGTAAGACTAAGCAGATCGTCAATCTGTGTGAACTGAAACACACAGACATCATCCATCATGAATGGGTCGGCGTCGACCAAGCGATTCCAGCCGGTTGTTATCAAAGCCCTGTCATCCTGGGATTTCATCAGTTTCATCAGATATGTATCTATTGATCCATGCATAGACACCATGAGATTGTCCATTGGGCTGCTCTCAATGTGCTTGAGTAGGTACCTCAAGCTAAAAACAGTAGAAAAGGTCTGAAAAACAACATTATTTCAGTACAAACAACAAGTGGTAAATACAAACTGTACTACATCAATTCAATGTCCATACCATTTTCCCTTTTTCAACACAAGTTTTTTTCAATGTGCAATGGAAGAGTGGAATCTTAGGCAAATTGACTGCGGCAATATGAGCAAGTTGTTGCTGCATACTGCGTGTCAACGTTACGTCATTTCCATACCAACAGTACTTATCGAAACCACTGAAAGTATTGTCCTATAAAATAAAATTAGTAGACAACAACAAATGGATGGGTTTTTTTTGTCGGTAGAGAGAACAAATGCATTCAAGGTAGTGACAAATTTCACACCTATTGTGACTGTAGAACGGCGCACGCTTCGATAAATTTTCCTTCTCTCAACCTCTTCTGCACGAGTTTAATCAAATCCTATAACACCTTGCATGTCCAAAAATAATTGAAATGACAGTTGGGTTAAGAAAGCAAACCATCATCACTGTCTGAGTTAACGATTACTTCGTTTGCATCAGCCATTGCTAGTTGGGTGATGCACTGGTAAGCATGTTTTGCGAGATTATATTTCATCAGTTTCATCGGATTTGTATAATCAAAATTGATTATTAGAGGAAGCAAAACCAACCTGGAAGCCTCCTCCCGGTCTGTACAACCGCCGGCTCCCGCGCCGACCGACCGCCTCCCCCGGCGCCGCGCGACCGCCGGCTCCCGGGCCGAGCGACCGCCGCCTCCCGCGCCGCCGACCACCAGCCCCGTGCCTCTTCTTCGAGCAGATGGAGAGGTTTCTGGAAGGGGAGAGGACTCTGCAAGAGTAGAGGTTGGGTGGGTTAA
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| CDS seq | ATGTCGCCAACGCTGCCCCCGCGCCCGTCGCCAACGCCGCTGGTGCCGTCGCCGCCGTTGCAGGTGCTCGTCGCCCCTGCCGCCGACTCCTGTGATTTTATCGCTGTTGTAGAGGTGAAGATTGAGATTAGTAAATCAATTGATTGGGAAGTGATAGACTATATTGATGAGGATACAGTACATAGGTATGTCATTTGCCTGAAAGACAATCCTGACAAGGTTAAGATTTTGAATTGTAATTATGAGGACTCAATTTTGAAGACATTGAGTTGCCCATGCAGAAAATTGGAGTGCGAGAGCCTTCCATGTCATCACATTTTTGCTGTACTGTTTCATTTGAAGTTGGATGCCATTCCTAAATTCTGCGTAGAGCGCAGGTGGACTGTTCAAGCAAAAAATGTTTTCCCTTCTGATAGGTATGGTGAAGCATATACATGGTCAGACCAGATGGAAAGGTATCGTAGGCTTCGCAGCTTCGGTTCTGAAGTTCTTTTGAAGTGCTCGATGTCCAAGGAATGTACTTTGAAGGTGATGGAAATGCTGGAACAGTTGGACATAGAAACTGAAGGTTGCGAGCAAAAGGATATATATTTGACCTTGCATGGTCATGTTGTAGCTCAAAGTTTACGTACAGACATTGCTTCACGGGATTTGGTGCATGATCCAATGGAAATTGTGCCTAAGGGTGCTCCCACTAAAAGATTGAGAGGATTCATGGAGAAGCGTGTCAGGCGTTGTGGTTATTGCCGCCAAGCTGGTCACACAATTCGTTGTTGCCCAATATACCTAAGGAAAGTAGAAGAAGATAGGAAGCAAAACCAACCTGGAAGCCTCCTCCCGGTCTGTACAACCGCCGGCTCCCGCGCCGACCGACCGCCTCCCCCGGCGCCGCGCGACCGCCGGCTCCCGGGCCGAGCGACCGCCGCCTCCCGCGCCGCCGACCACCAGCCCCGTGCCTCTTCTTCGAGCAGATGGAGAGGTTTCTGGAAGGGGAGAGGACTCTGCAAGAGTAGAGGTTGGGTGGGTTAA
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| Protein seq | MSPTLPPRPSPTPLVPSPPLQVLVAPAADSCDFIAVVEVKIEISKSIDWEVIDYIDEDTVHRYVICLKDNPDKVKILNCNYEDSILKTLSCPCRKLECESLPCHHIFAVLFHLKLDAIPKFCVERRWTVQAKNVFPSDRYGEAYTWSDQMERYRRLRSFGSEVLLKCSMSKECTLKVMEMLEQLDIETEGCEQKDIYLTLHGHVVAQSLRTDIASRDLVHDPMEIVPKGAPTKRLRGFMEKRVRRCGYCRQAGHTIRCCPIYLRKVEEDRKQNQPGSLLPVCTTAGSRADRPPPPAPRDRRLPGRATAASRAADHQPRASSSSRWRGFWKGRGLCKSRGWVG |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKYG_12g0021560 | OsKYG_12g0021560.01 | Chr12 | 26345037 | 26349604 | + | NAM | ||
| CDS seq | ATGTCGCCAACGCTGCCCCCGCGCCCGTCGCCAACGCCGCTGGTGCCGTCGCCGCCGTTGCAGGTGCTCGTCGCCCCTGCCGCCGACTCCTGTGATTTTATCGCTGTTGTAGAGGTGAAGATTGAGATTAGTAAATCAATTGATTGGGAAGTGATAGACTATATTGATGAGGATACAGTACATAGGTATGTCATTTGCCTGAAAGACAATCCTGACAAGGTTAAGATTTTGAATTGTAATTATGAGGACTCAATTTTGAAGACATTGAGTTGCCCATGCAGAAAATTGGAGTGCGAGAGCCTTCCATGTCATCACATTTTTGCTGTACTGTTTCATTTGAAGTTGGATGCCATTCCTAAATTCTGCGTAGAGCGCAGGTGGACTGTTCAAGCAAAAAATGTTTTCCCTTCTGATAGGTATGGTGAAGCATATACATGGTCAGACCAGATGGAAAGGTATCGTAGGCTTCGCAGCTTCGGTTCTGAAGTTCTTTTGAAGTGCTCGATGTCCAAGGAATGTACTTTGAAGGTGATGGAAATGCTGGAACAGTTGGACATAGAAACTGAAGGTTGCGAGCAAAAGGATATATATTTGACCTTGCATGGTCATGTTGTAGCTCAAAGTTTACGTACAGACATTGCTTCACGGGATTTGGTGCATGATCCAATGGAAATTGTGCCTAAGGGTGCTCCCACTAAAAGATTGAGAGGATTCATGGAGAAGCGTGTCAGGCGTTGTGGTTATTGCCGCCAAGCTGGTCACACAATTCGTTGTTGCCCAATATACCTAAGGAAAGTAGAAGAAGATAGGAAGCAAAACCAACCTGGAAGCCTCCTCCCGGTCTGTACAACCGCCGGCTCCCGCGCCGACCGACCGCCTCCCCCGGCGCCGCGCGACCGCCGGCTCCCGGGCCGAGCGACCGCCGCCTCCCGCGCCGCCGACCACCAGCCCCGTGCCTCTTCTTCGAGCAGATGGAGAGGTTTCTGGAAGGGGAGAGGACTCTGCAAGAGTAGAGGTTGGGTGGGTTAA
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| Protein seq | MSPTLPPRPSPTPLVPSPPLQVLVAPAADSCDFIAVVEVKIEISKSIDWEVIDYIDEDTVHRYVICLKDNPDKVKILNCNYEDSILKTLSCPCRKLECESLPCHHIFAVLFHLKLDAIPKFCVERRWTVQAKNVFPSDRYGEAYTWSDQMERYRRLRSFGSEVLLKCSMSKECTLKVMEMLEQLDIETEGCEQKDIYLTLHGHVVAQSLRTDIASRDLVHDPMEIVPKGAPTKRLRGFMEKRVRRCGYCRQAGHTIRCCPIYLRKVEEDRKQNQPGSLLPVCTTAGSRADRPPPPAPRDRRLPGRATAASRAADHQPRASSSSRWRGFWKGRGLCKSRGWVG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.475122 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0021200 | RBH | 8.679755 | 0.000000 | 8.569613 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0369100 | RBH | 0 | 0.0179285 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0394900 | RBH | 7.151125 | 25.735785 | 49.6192705 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0021330 | SBH | 0.739325 | 0.734068 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0021460 | SBH | 3.148910 | 6.365159 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0075260 | SBH | 0.000000 | 0.0 | 0.076780 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G021220 | SBH | 1.888723 | 3.159424 | 7.011118 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0020970 | RBH | 4.721482 | 28.809404 | 13.199014 |
