Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsMH63_11G0271700 OGI:11051300 | 16/16 Minghui 63 | MH63RS3 | HZAU Chr11:20299928-20304033
Gene Symbol -
DNA seq

TCACATCATCCAGAAAATGCAACTGTGCTGCAAGAGCTTTGGGCATTCCGTAATATTCAGTTCCTTAAGGGAGGTGAAGCCGGAAAGCCCATGACAGTACTGCAGATTATCGCTGCTAAACTTGATTTTCCTGAGCAAAGGCAGGCCTTGTGGCTCAAGAGATATGCATGTCATCAAATTGCAGGTGATTGTTAAGCACTCCAGTGAAGAGAGGTTATTCAGCAGCCTGCACGGCTTGTTATCTTTGAATGGACCTCCAAGACGCAATGTGGTGAGTGATGGGAAGGAAGGAAGTTGGTCCAGATTAACGCACCTACAAATGTGTAGTTGACGTAGGCTGGGCGATGCTGGAATCGCAGTGATATTGGGACAATCTGTCACTTGAAAAGAAACCAAGGACAGAAAGGGCGCTACAGGAAGAGACAGTATGTTATCTGCACATCTGATGGAAAGCCTGTGCAAGCGCGGAAATGCACCATCATCCACCCCAGACCACTCTGACCACTCGGGCATCTGCACGAATTTCAGTTTCTTCAGTGCTGGGAAGCCCTTGAAACCATGGCCATGGCTGCAGAACTCCTGTCGGATGTGTTGCAGAAACATCATTTCACGGACATGGAGAAACTGGAGGGACGGTAGCTCACCAAGCGTTGGAAGTCGCTCAGATTTACAGAACAACAACTTTATTGTTGTCAAGTTGGAGAAGGAAGGCTCACCCAACCAAGAGGGATATTGGGAACTCTCATATCTCTGTATGATCAGTTTTCTTAGGCTGTTATATGGTCGCAAGTTGTCAAGCAGCAGCTCGTGAGACACTGTAATTGCAGGTTCGCTTTAATTTGTACCGTGTTTTCACTGTAATCTGGGCTGTCATCCAAATCAATGGCTCTACTGAAGTCCAAGTGTAAGGACTGAAGGTGCTTTTTATTATGTAGCCAAGCTTCTTTTGCATCCTCCTTGCGATCTAAATCTGCCAGTCCTCTTACTGTCAACTCCTTAATTTTGTTCAAGCTCTTCAGTTCTCCCATGTTACAAATGTTACGACCGATATATAGTTGAGGCAAAGTATGCAGGTTAATTAGGCTGTGAATTCCGTGTAGCTCAAGCCTGTAGTCAGAAATATCGTACCGGTTATCTAGCAGGTATTCACAATGTAAATGGCGTAGTAATTTTGCCCTGCCCATGAAGCCCTCCAATGCCTTGCTTAGAAAGAACTCGTCCTCGTAAAAGACAAGAGCTCTCAACTTCTCACAACCGAGGAGCAATTCTTCTGGATTTTCTACATACCCAGATGCTCTATTCAACACTATGATGGCTCTGCGAAAGGGCCTGTAGCCTACTAGTTACAAAAGCCTCAGTAGCACTTGAGGTCTTGGGTTCGACTCTCCATGGGAGCGAATTATCGGCGTTGTGCTTTCAGTGGTAGGCGACGTACCCGTCGACAGCGAGGCGCCTGTGGTGACTTCGTCAATCTCTCCAGGATTTACCGGCCCAGTTTTCGAAGATGCTCATAGGGGTAGGATTTACGTGCGTGTGTTTATAGGAGTGAGTGCGCGTGCGTTGTGAGTGTCTGCATTGTACTGTGTAATTCTAGAAAAAAAAAAAACTATGATGGCTCTGAGTGAATGTGAGGCAACTGAGATTTCACCCGATATACGATGAATGGACAGGTACCTAACGTTTGGTGGAATTTCAATGCATCCATCATCTGCTTCGAGCATAAAGAACTCATCTGCAGCAAGAAAGCATGCAAGATCGTGGATAAGATCATGCATGATGTGAAGCCCTTGAATATCATGCACTTGCAGAAATGAGCGGTCAACTATTTCATTGAAATATAGTCTTGCGGCACTATTATGTCCGTCACATTGAATTATATCAAGCGATATCCACTGTCCAAACACCTCGCTTCTATCAATTAAATAACCTTTGGGAAACAGAGAAAGGGCAACAAAACATCTCTTCAGGTGTATAGGCAAGTGTCTGTAGCTCAATTCCAAGGCTGGTAGAATCTCCTTTTGTGGTGGCTCCAAGTCCCATATGTCACTTTCTAAGACATATCTCCATCTCACTTCATCGGCTTCATAGCGCAACATGCTTCCTAATGTTTTGATTGCTAACGGCAAGCCCCTACACTTTACAATAATATTCTTGCCAATCTATCCAGGTCTGCTGGGGTGTCATCTTGTTGGTCAACAGAAAATGCAGCTTGTTGGAATAATAACCAGCTGTCATCTGAACTTAAGCAGTCTAGGTAGTAGAAAGGCATTGTCTGCACCAACTTTGCCACTGTCTCATTGCGGATCGTTACCATGATCCTACATACACTTGAAGCAAACAATGGCATGCACAACAACTCCCATGTATCTCTTCGTTCAGTCCATACATCATCTAGGACAAGTAAAAAACTCTTCCCCTGTAGTTTATTTCCCAGCACCTCCTGAAGATCAGCCAGTTCTGATAGACTGGAGCTCTCCTTTGTCAGCGAAGAGATGATCTTTTGTGTAATGTTCTTGGTATCAAAGTACTCTGACACACAAACCCATGCGCAGAGATCGAAAGATTGGTTCACCCTTGGGTCATTGTACACGAGTTGTGCCAGAGTTGTTTTGCCCACACCCCCCATACCAACAATTGGAAATACAGACATACAACATGCATGCAACGCTGCTGCTTTCTCCGGACTTCATCAGCCTTTCGATAATTATCTCCTTCTCTCGCTCTCTTCCAATAATTCTCTCTTCCACTACAAAAGAGCTGGTTTGCCGCACAGTTTGGAAGTCAGGGACAATCCGCCGATACCCATCATTTTTGGACAGACTAAAACTATCATAGTAATGTTTCATCTCAGTAAACCTCTGTACAACCTTCCTTGCTCTAACAGCCAACTCACTTGGAACTGGAACTACGCCAGGTTTAATGCTGTAGTGCTCGTCATTTACCTTCAGAATAAAACATATATTAGCTAAGAAGGAGATTTACTAATTTAACACTAATTTCTACATGCATTTTCCCATTTTTCAAGACAAAATCATACAGACAACTTACGGTTTGTTTACACAAGTTTTAGATTGGCACGATCAATGTTTTTGCAGTTATATATACTAAACAGTAAATTTAATTAGTTACTTTTCTGAGAGGAAAGTAGTAAACTAAATAATTAGTTTTTCATGTACACACACAGATATATAAATAATCATTACATATGGACTGCATTGATGAAATAATGACTATGGTTGTGTTTAGTTCTCTTCAAACTTCTAACTTTTCCGTCACATCAAATGTTTAGACACATGCATGGAGCATTAAATATGGATGAAAAAAAATCAATTGCACCGTTTGCATGTAAATTGCGAGACGAATCTTTTGAGCGTAATTACGCTATGATTTGACAATGTGGTGCTACAGTAAACATTTGCTAATAACGGATTAATAAGGGTTAATAGATTCGTCTTGCAATTTACATGCGGAATCTATAATTTGCTTCGTTATTAGTCTCTGTTTAATACTTCAAATGTATGTTCGTATACGTTAAATTTTTTTTTTACCAAAACAACTAAACACGGCCTATGTACTTATGTAGTATTGACTTAGTTGGCCGAAATAATTAATTATTACATGCCTACAGAAGAATCAAAGACATGAGAGGGGAGAGACGTTGAAGACGTACTATATGGTCACTAACTAGAAAAAAGATATTTGCAGGCGAGCAAAAATGGTCTTCCCAGGCAGACCGGCGTTCCGCCCGTAGGCAATCGCCGGTGCTTACGCTTGCCGTTGCAGGTATTAAGGCTCCTCTCGAACACCTCCGTACTGACGCGGTTCGCCTCGTACTCGTACTCATCCACCACATCCTCCGCGTCGTAGGCCAATTCCTTGAGCTCCGTGAGCCGCAGTTTCGCCGACTCCTCCCTGATGATCCAGTGCTCCTCCGCGTCGTGCAGCATGGCGTGGATCCTGCGCATCGTCCTCTCCAGCATCCGGAGGTCTTCCAGGCCCTCGCTTGTTGTCGACGGCGCCGTTGCTACTTGCAGGCTTGCTGGCAGTAAGGACGAGAGCTTGTCAAGTGCCCATTTCACGCTCATGGATGCGAACAATTCAGCCAT

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CDS seq

ATGGCTGAATTGTTCGCATCCATGAGCGTGAAATGGGCACTTGACAAGCTCTCGTCCTTACTGCCAGCAAGCCTGCAAGTAGCAACGGCGCCGTCGACAACAAGCGAGGGCCTGGAAGACCTCCGGATGCTGGAGAGGACGATGCGCAGGATCCACGCCATGCTGCACGACGCGGAGGAGCACTGGATCATCAGGGAGGAGTCGGCGAAACTGCGGCTCACGGAGCTCAAGGAATTGGCCTACGACGCGGAGGATGTGGTGGATGAGTACGAGTACGAGGCGAACCGCGTCAGTACGGAGGTGTTCGAGAGGAGCCTTAATACCTGCAACGGCAAGCGTAAGCACCGGCGATTGCCTACGGGCGGAACGCCGGTAAATGACGAGCACTACAGCATTAAACCTGGCGTAGTTCCAGTTCCAAGTGAGTTGGCTGTTAGAGCAAGGAAGGTTGTACAGAGTCCGGAGAAAGCAGCAGCGTTGCATGCATGTTGTATGTCTGTATTTCCAATTGTTGGTATGGGGGGTGTGGGCAAAACAACTCTGGCACAACTCGTGTACAATGACCCAAGGGTGAACCAATCTTTCGATCTCTGCGCATGGGTTTGTGTGTCAGAGTACTTTGATACCAAGAACATTACACAAAAGATCATCTCTTCGCTGACAAAGGAGAGCTCCAGTCTATCAGAACTGGCTGATCTTCAGGAGGTGCTGGGAAATAAACTACAGGGGAAGAGTTTTTTACTTGTCCTAGATGATGTATGGACTGAACGAAGAGATACATGGGAGTTGTTGTGCATGCCATTGTTTGCTTCAAGTGTATGTAGGATCATGGTAACGATCCGCAATGAGACAGTGGCAAAGTTGGTGCAGACAATGCCTTTCTACTACCTAGACTGCTTAAGTTCAGATGACAGCTGGTTATTATTCCAACAAGCTGCATTTTCTGTTGACCAACAAGATGACACCCCAGCAGACCTGGATAGATTGTTCTTTATGCTCGAAGCAGATGATGGATGCATTGAAATTCCACCAAACGTTAGGTACCTGTCCATTCATCGTATATCGGGTGAAATCTCAGTTGCCTCACATTCACTCAGAGCCATCATAGTTTTTTTTTTTTCTAGAATTACACAAGCATCTGGGTATGTAGAAAATCCAGAAGAATTGCTCCTCGGTTGTGAGAAGTTGAGAGCTCTTGTCTTTTACGAGGACGAGTTCTTTCTAAGCAAGGCATTGGAGGGCTTCATGGGCAGGGCAAAATTACTACGCCATTTACATTGTGAATACCTGCTAGATAACCGGTACGATATTTCTGACTACAGGCTTGAGCTACACGGAATTCACAGCCTAATTAACCTGCATACTTTGCCTCAACTATATATCGGTCGTAACATTTGTAACATGGGAGAACTGAAGAGCTTGAACAAAATTAAGGAGTTGACAGTAAGAGGACTGGCAGATTTAGATCGCAAGGAGGATGCAAAAGAAGCTTGGCTACATAATAAAAAGCACCTTCAGTCCTTACACTTGGACTTCAGTAGAGCCATTGATTTGGATGACAGCCCAGATTACAGTGAAAACACGGAGTTCTGCAGCCATGGCCATGGTTTCAAGGGCTTCCCAGCACTGAAGAAACTGAAATTCGTGCAGATGCCCGAGTGGTCAGAGTGGTCTGGGGTGGATGATGGTGCATTTCCGCGCTTGCACAGGCTTTCCATCAGATGTGCAGATAACATACTGTCTCTTCCTGTAGCGCCCTTTCTGTCCTTGGTTTCTTTTCAAGTGACAGATTGTCCCAATATCACTGCGATTCCAGCATCGCCCAGCCTACGTCAACTACACATTTGTAGGTGCGTTAATCTGGACCAACTTCCTTCCTTCCCATCACTCACCACATTGCGTCTTGGAGGTCCATTCAAAGATAACAAGCCGTGCAGGCTGCTGAATAACCTCTCTTCACTGGAGTGCTTAACAATCACCTGCAATTTGATGACATGCATATCTCTTGAGCCACAAGGCCTGCCTTTGCTCAGGAAAATCAAGTTTAGCAGCGATAATCTGCAGTACTGTCATGGGCTTTCCGGCTTCACCTCCCTTAAGGAACTGAATATTACGGAATGCCCAAAGCTCTTGCAGCACAGTTGCATTTTCTGGATGATGTGA

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Protein seq

MAELFASMSVKWALDKLSSLLPASLQVATAPSTTSEGLEDLRMLERTMRRIHAMLHDAEEHWIIREESAKLRLTELKELAYDAEDVVDEYEYEANRVSTEVFERSLNTCNGKRKHRRLPTGGTPVNDEHYSIKPGVVPVPSELAVRARKVVQSPEKAAALHACCMSVFPIVGMGGVGKTTLAQLVYNDPRVNQSFDLCAWVCVSEYFDTKNITQKIISSLTKESSSLSELADLQEVLGNKLQGKSFLLVLDDVWTERRDTWELLCMPLFASSVCRIMVTIRNETVAKLVQTMPFYYLDCLSSDDSWLLFQQAAFSVDQQDDTPADLDRLFFMLEADDGCIEIPPNVRYLSIHRISGEISVASHSLRAIIVFFFSRITQASGYVENPEELLLGCEKLRALVFYEDEFFLSKALEGFMGRAKLLRHLHCEYLLDNRYDISDYRLELHGIHSLINLHTLPQLYIGRNICNMGELKSLNKIKELTVRGLADLDRKEDAKEAWLHNKKHLQSLHLDFSRAIDLDDSPDYSENTEFCSHGHGFKGFPALKKLKFVQMPEWSEWSGVDDGAFPRLHRLSIRCADNILSLPVAPFLSLVSFQVTDCPNITAIPASPSLRQLHICRCVNLDQLPSFPSLTTLRLGGPFKDNKPCRLLNNLSSLECLTITCNLMTCISLEPQGLPLLRKIKFSSDNLQYCHGLSGFTSLKELNITECPKLLQHSCIFWMM

Function Putative disease resistance protein RGA3 [UniProtKB/Swiss-Prot:Q7XA40]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsMH63_11G0271700 OsMH63_11T0271700.1 Chr11 20299928 20304033 - maker
CDS seq

ATGGCTGAATTGTTCGCATCCATGAGCGTGAAATGGGCACTTGACAAGCTCTCGTCCTTACTGCCAGCAAGCCTGCAAGTAGCAACGGCGCCGTCGACAACAAGCGAGGGCCTGGAAGACCTCCGGATGCTGGAGAGGACGATGCGCAGGATCCACGCCATGCTGCACGACGCGGAGGAGCACTGGATCATCAGGGAGGAGTCGGCGAAACTGCGGCTCACGGAGCTCAAGGAATTGGCCTACGACGCGGAGGATGTGGTGGATGAGTACGAGTACGAGGCGAACCGCGTCAGTACGGAGGTGTTCGAGAGGAGCCTTAATACCTGCAACGGCAAGCGTAAGCACCGGCGATTGCCTACGGGCGGAACGCCGGTAAATGACGAGCACTACAGCATTAAACCTGGCGTAGTTCCAGTTCCAAGTGAGTTGGCTGTTAGAGCAAGGAAGGTTGTACAGAGTCCGGAGAAAGCAGCAGCGTTGCATGCATGTTGTATGTCTGTATTTCCAATTGTTGGTATGGGGGGTGTGGGCAAAACAACTCTGGCACAACTCGTGTACAATGACCCAAGGGTGAACCAATCTTTCGATCTCTGCGCATGGGTTTGTGTGTCAGAGTACTTTGATACCAAGAACATTACACAAAAGATCATCTCTTCGCTGACAAAGGAGAGCTCCAGTCTATCAGAACTGGCTGATCTTCAGGAGGTGCTGGGAAATAAACTACAGGGGAAGAGTTTTTTACTTGTCCTAGATGATGTATGGACTGAACGAAGAGATACATGGGAGTTGTTGTGCATGCCATTGTTTGCTTCAAGTGTATGTAGGATCATGGTAACGATCCGCAATGAGACAGTGGCAAAGTTGGTGCAGACAATGCCTTTCTACTACCTAGACTGCTTAAGTTCAGATGACAGCTGGTTATTATTCCAACAAGCTGCATTTTCTGTTGACCAACAAGATGACACCCCAGCAGACCTGGATAGATTGTTCTTTATGCTCGAAGCAGATGATGGATGCATTGAAATTCCACCAAACGTTAGGTACCTGTCCATTCATCGTATATCGGGTGAAATCTCAGTTGCCTCACATTCACTCAGAGCCATCATAGTTTTTTTTTTTTCTAGAATTACACAAGCATCTGGGTATGTAGAAAATCCAGAAGAATTGCTCCTCGGTTGTGAGAAGTTGAGAGCTCTTGTCTTTTACGAGGACGAGTTCTTTCTAAGCAAGGCATTGGAGGGCTTCATGGGCAGGGCAAAATTACTACGCCATTTACATTGTGAATACCTGCTAGATAACCGGTACGATATTTCTGACTACAGGCTTGAGCTACACGGAATTCACAGCCTAATTAACCTGCATACTTTGCCTCAACTATATATCGGTCGTAACATTTGTAACATGGGAGAACTGAAGAGCTTGAACAAAATTAAGGAGTTGACAGTAAGAGGACTGGCAGATTTAGATCGCAAGGAGGATGCAAAAGAAGCTTGGCTACATAATAAAAAGCACCTTCAGTCCTTACACTTGGACTTCAGTAGAGCCATTGATTTGGATGACAGCCCAGATTACAGTGAAAACACGGAGTTCTGCAGCCATGGCCATGGTTTCAAGGGCTTCCCAGCACTGAAGAAACTGAAATTCGTGCAGATGCCCGAGTGGTCAGAGTGGTCTGGGGTGGATGATGGTGCATTTCCGCGCTTGCACAGGCTTTCCATCAGATGTGCAGATAACATACTGTCTCTTCCTGTAGCGCCCTTTCTGTCCTTGGTTTCTTTTCAAGTGACAGATTGTCCCAATATCACTGCGATTCCAGCATCGCCCAGCCTACGTCAACTACACATTTGTAGGTGCGTTAATCTGGACCAACTTCCTTCCTTCCCATCACTCACCACATTGCGTCTTGGAGGTCCATTCAAAGATAACAAGCCGTGCAGGCTGCTGAATAACCTCTCTTCACTGGAGTGCTTAACAATCACCTGCAATTTGATGACATGCATATCTCTTGAGCCACAAGGCCTGCCTTTGCTCAGGAAAATCAAGTTTAGCAGCGATAATCTGCAGTACTGTCATGGGCTTTCCGGCTTCACCTCCCTTAAGGAACTGAATATTACGGAATGCCCAAAGCTCTTGCAGCACAGTTGCATTTTCTGGATGATGTGA

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Protein seq

MAELFASMSVKWALDKLSSLLPASLQVATAPSTTSEGLEDLRMLERTMRRIHAMLHDAEEHWIIREESAKLRLTELKELAYDAEDVVDEYEYEANRVSTEVFERSLNTCNGKRKHRRLPTGGTPVNDEHYSIKPGVVPVPSELAVRARKVVQSPEKAAALHACCMSVFPIVGMGGVGKTTLAQLVYNDPRVNQSFDLCAWVCVSEYFDTKNITQKIISSLTKESSSLSELADLQEVLGNKLQGKSFLLVLDDVWTERRDTWELLCMPLFASSVCRIMVTIRNETVAKLVQTMPFYYLDCLSSDDSWLLFQQAAFSVDQQDDTPADLDRLFFMLEADDGCIEIPPNVRYLSIHRISGEISVASHSLRAIIVFFFSRITQASGYVENPEELLLGCEKLRALVFYEDEFFLSKALEGFMGRAKLLRHLHCEYLLDNRYDISDYRLELHGIHSLINLHTLPQLYIGRNICNMGELKSLNKIKELTVRGLADLDRKEDAKEAWLHNKKHLQSLHLDFSRAIDLDDSPDYSENTEFCSHGHGFKGFPALKKLKFVQMPEWSEWSGVDDGAFPRLHRLSIRCADNILSLPVAPFLSLVSFQVTDCPNITAIPASPSLRQLHICRCVNLDQLPSFPSLTTLRLGGPFKDNKPCRLLNNLSSLECLTITCNLMTCISLEPQGLPLLRKIKFSSDNLQYCHGLSGFTSLKELNITECPKLLQHSCIFWMM

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0044955 0.051896 0.035

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0492900 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g30050 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os11g0492900 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0014540 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0014500 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0014430 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0014220 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0014520 RBH 0.0 0.0 1.507677
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0270000 SBH 0 0 0.013987
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0014780 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0285400 RBH 0 0.009521 0.0213635
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_Ung0004560 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0014730 SBH 0.384812 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0014310 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0014180 RBH 0.000000 0.0 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0014490 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G014280 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0014540 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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