Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_11G0270000 | OGI:11051350 | 15/16 | Minghui 63 | MH63RS3 | HZAU | Chr11:20169356-20173947 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTACGGGTTGTTGTTACTATAATCATACATAACTTTGCTGTGTTCATCGGTTCGCACAACAGATCCCAGCAATCTCTTCGTTCATTCCATACATCATCCAACACAAGTAATACCATCTTTTGCTTTATTCGTTTTGCCAATGTCTCATGAGGACTACAAACTTCCGATAGATCAGAATTATCCTTCTTTAATGAACTTATGATGCTCTTTGTTATGTAAGTAGGATCAAATTGCTCTGACACACAAACCCATGCATGCATGTCAAAAAACCCTTGTATCCTTGAGTCGTTATATACAAGCTGTGCTAATGTTGTCTTGCCTAATCCGCCCATACCGACAATAGCCAAGATAGAAACTGGAGTAGCTACACTGTCACTCGTCATGGACAACAACTTTTCTACAATGTTGTCCTTGTCTTGCTCTCTTCCAATAATTTTCGGTGCATATATAACAGAGCTATTCTTGGGTAGAGTACCAATATTAGGAGCAAACCGTCTCTCTCCATCATTCTCCGATAAAGTAAAATTATCAGAATAATATTGGATTTCATGGAATCTCTTAATAAGTTTCCTTGCTTTAAGAGCCAGCTCTTCTGGAACATGTGCCATACCAGTATTATGGTACAAGACCTCATTTTCCTTTTTCAAGATATAAAATGAAAAGGATTGCGTCACTATACTTGCATATAGTATATAGGAGTGTTTTTAAGGTGCACCAAATTACTATGACTTGTTTATTGTACATATATAGATCCAAGGGCTAATAATACTCCAACTTCATGTGTGTTAAGGGTAATTTATTGCCATTTAAATTCAGTTACTACCATAAATTGCAATTGTAACAAGATACAATATCCTTTGCTTCAATACTACCGAATTAAAATTAGACTGAAAAATGTTTTTTTTTCGACCCATAAACAAGTGACAACTCTTTTGATATTATTGTACTAGTAAAACTCAAACCATACAATTTTTAGACTGAAAATGTAGACTTTTTGGACCCACAAACTACCATTCAAAAGACTGTTAAAATGGAAAAAAAATCCATAAGGATTAGAACACAGACACACAAATCGAAAATTTCACATTATCCATTGAAACTTCAATCTACAAAATTCCTCTGGAGAAAAAATAACTCCCTATATGTTCAAACCTTTTATATTCAAGCTTTCTATATCTATTATATACTAAAATTCCATTAAACTTCCTATAAGCGCTCTCAAGTTGCCACGTGGCGCTCTAATAAATTAGAAAAAATCCTAGAAATTCTAAGAAAAAAAAGTAAAACATCTACCCCTTAATTTTCACTTAAATTGGTGGGTCCAATATTATACACCGTTAGATAAAATTGATCATAAAACAAACAAAATGCTATGGGTCCAACCTCTCCTCTTTCTCCGGTGCATAGGTGATCACGTACGTACATGTAGTACGTACGGCTCCCTCCATTTTTTTTCCTTTTTTCTTCTTTTTTTCCATTTATATAATTGATATATATTTTCTAAAATTTTAAAAACAAAAAATATACCATCATATAACTCTTTATAAACATAGGTAACTAAATTAGCACTACAATCTTTGAAAATAAAATTTACACCATTATACGTTTATCCATTAAATCAATAATGTAAGATAATTTCCATTTCAATCGGTGTTGTAGTTACTTTATACTATTATTTTCAAATAATACACTATTTTAAAATAAAGTTTACACAATTATATTGTGTATCTATCAAATAAATAATTTAGAATCCATATTAACTAATTTATACATGCACTTAAACAGATGGACCCATTATTTAAATCATCCGATCTATGTTTTATTACTTTGGACTATTATTCTCAAATAATGCATTGTTTTAAAATAAAATCTACACCATTACATTGTGTACCCAATAAATTAATAATTTAAAATCTATATTAACTAATTTACATTTACACTAGAACCAATGGACCCATTATTTAAATCACCGGATCTATTGTTAATAAATAAAGTGTCCAAAGTTCTCTTTTTTGGTCCACTGCATAATGCACGTTTGCACCTTCGCCTTTAGCATGTGTGACAAAGCATCATGTCTGAGGCAGCTAAGGTGTTCACGACTACTGCAGCGCTACCGCTTTGCCACATATCAAATCATATATAAAGATAATTAATTTTGTTAATAACATGAAAAGAAAATTAAAGGTGTGATGCAGCGAGAGAAGAATTAAGCACCGTGGATTGAGTTTTTCCAACACTTAGCTCTATTTAAGCTGAAACCAAGAGTTGAATACATAATAATTATAATTGATAATTATAATTGAAAGAAATCATTATGTTATAAGGCCATTCACAGTGAACACACATGGCGTGTGACAATGTTTGTCCACCTAGATAAAGTGTATGCGTGGAGGAGAGAGGGGAGTGGGGACCGCTCCTTCCCCAGGTTCGTGTGACCAACATTAGCTCCGAGGACCTCGTCAGAGAAATCAACTTTTTGCTAGAAAAATCGCATCCGCCCGTTGGAGAAAACCGGAGAGAGAGAGGGGGGGGGATAGGGAGCCGCATCTGCGCCGGAGACGGGATAGGAGGGGCTCCCAGTCCGAGCCATATCCACCCTGAGGTCGCCGGAGAAGCCACATCCGTGCCGGAGAGGGCCCGAGGCTAGATCTGGCGAGCCCCGGGCTGGGCCTCCGCTCCAGCCGGCGCTGTCGCCGTTTCGGTCGCCTCTCCGCCCGGGCGCCATCGCCTCTCCGCTAGGCTTCCGCCGCCTCTCTTGCGTAGTCTCCGCGGTCCACGCCACAGAGCTTGTCCGCACGCCGGCCACGGGAGAGGCGCTGGTCGGGGGAGGAGATGAGGGGCGCCGGCCGGAGCCCGGAAGAAGCGGGAAGCTGGGGAAGGAGCTAGCGGCAGCGCATAGATTGGAGATGGAGCGATGCCGATGCGGGTTGGTGCGGCCGTGCGGGAAGAAAGAGATGAGTGGGGAAAGTTATTTGTGGTGGGCCCGGCCTGGAAAAGAAAAATTGATATGGGCTCATCCAAAGCTACACGCGCATTGTGGAGATGAAAGCCTCGTTTTGCTTTTTGCATAAGTGGAGGCTTTGGCTCCTTGTTGAGAGCTGACGCATTGCTAATGCTCTGAATATGAGCACAATATTAATGAATATAAATACAACTCTTACTAGGACAAGAGTGTTATACGAGAGTTTAAGGCCCTAATTTATTTTCTTGATTCCATCTTTTGGATTTTTGTTTGCATGCTCTGACACTTTCCAAGTTCCTAAATGGTGCCTTTATAAAACAACTTTTTAGAAGTTAATTCATTCGTTTATAATTAATCTCAAATAGCTATCACATAAATTAGATAATTCTCAGTTGTCCTAAGTAGTACATATTTTTTCATGCGAGTCATGGTGATCAGTAAATTAATGTTCAACGCATAATCAAGATCATAAGATGAATATGTAAGAGCTACTATGAACAATTGTAAATAGGTGTCAAAATTAATTGCTATTAATTAGACTTCTAATGGCTTGCTAGCAACATATTTAATTTCTATATACATGTATATAAACATGGACGAATCTGGAATGAATATTAACATATATCCCATACATATATATTGTATTACATGGTTAATATTCTAGTCACATGTGGTAAGTCCATTAAAATTTCTTAACATGTATACGCTTCCCTCCCTTTCTTATTATATCATGCGCCTTCACGAGATGATTTAATCATAAGAATTTTGAGTATCTTGCTATCGCATTTTTCATTTGTAGCCATACTACAAGCAATAGTTTATTATTTACTCGAGAAAAAAACATGATTCAAAAGTTGTAAGTACTTAATCCATGTCCTAATCAAAAGTTTGTGAATGAATTTTTAAGATACTTTAAGAAAAATAGAACCCTTAAATTATTACAAAATAATAGTATCCAAATTTTAGTTTTTTCTTAATCTATGAGACAAAATTTTTGAACAAACAGTAAAAATCAAACCTTTCAATAATAATAATATAAGTGCCCGCGTATGCGCGCGGGCCACCTCCTAGTTGAATAAAATGGACACTGGTCTAACTGAAACTGCTGTGTGCGTTTGTTCTCAAAACGCATGCATACTAAGATTTCCGGTATATATATATTCATCAGTTTTCGCTGTTTTTTCCTCACCGAGGAAGTATAGTAAAGGCAGAAACAGATCGAAGTTGTTGGAAAAAACAGTGTTGCCTGTTCCTGTTGCCACTTACGCTTGTGGCTGGCCACGCTTGCAGATGGCTGGAGAGCCTCAGCCTTGCAACGGTTCACCTCGAGCTCGTACTCGTACTCGTCCACCAAGTCCTCCGCGTCATACGCTAGCTCCTTGAGCTCCTTGAGCCGCAGCTTGGCGCTTTCATCACGGATGTCCCAGTGCTGCTCCGCGTCCTTCAGAGTCGCGTGGATCCTGTGCATCGTCCGCTCCAGCATCCGGAGGTCCTCCAGATCTTGCTCATGCCCTTGCCTCACCATAGCAGCTGCCGACGAGGAGGATGCCAATAGGCTTATTGCTGGCAGGATGGAGGAGAGCTTGTCCAGTGCCTTCCTGATGGCAAGAGTGGCAAACAGTCCGGCCAT
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| CDS seq | ATGGCCGGACTGTTTGCCACTCTTGCCATCAGGAAGGCACTGGACAAGCTCTCCTCCATCCTGCCAGCAATAAGCCTATTGGCATCCTCCTCGTCGGCAGCTGCTATGGTGAGGCAAGGGCATGAGCAAGATCTGGAGGACCTCCGGATGCTGGAGCGGACGATGCACAGGATCCACGCGACTCTGAAGGACGCGGAGCAGCACTGGGACATCCGTGATGAAAGCGCCAAGCTGCGGCTCAAGGAGCTCAAGGAGCTAGCGTATGACGCGGAGGACTTGGTGGACGAGTACGAGTACGAGCTCGAGGTGAACCGTTGCAAGGCTGAGGCTCTCCAGCCATCTGCAAGCGTGGCCAGCCACAAGCGTAAGTGGCAACAGGAACAGGCAACACTGTTTTTTCCAACAACTTCGATCTGTTTCTGCCTTTACTATACTTCCTCGGAAAATGAGGTCTTGTACCATAATACTGGTATGGCACATGTTCCAGAAGAGCTGGCTCTTAAAGCAAGGAAACTTATTAAGAGATTCCATGAAATCCAATATTATTCTGATAATTTTACTTTATCGGAGAATGATGGAGAGAGACGGTTTGCTCCTAATATTGGTACTCTACCCAAGAATAGCTCTGTTATATATGCACCGAAAATTATTGGAAGAGAGCAAGACAAGGACAACATTGTAGAAAAGTTGTTGTCCATGACGAGTGACAGTGTAGCTACTCCAGTTTCTATCTTGGCTATTGTCGGTATGGGCGGATTAGGCAAGACAACATTAGCACAGCTTGTATATAACGACTCAAGGATACAAGGGTTTTTTGACATGCATGCATGGGTTTGTGTGTCAGAGCAATTTGATCCTACTTACATAACAAAGAGCATCATAAGTTCATTAAAGAAGGATAATTCTGATCTATCGGAAGTTTGTAGTCCTCATGAGACATTGGCAAAACGAATAAAGCAAAAGATGAGATTGCTGGGATCTGTTGTGCGAACCGATGAACACAGCAAAGTTATGTATGATTATAGTAACAACAACCCGTAG
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| Protein seq | MAGLFATLAIRKALDKLSSILPAISLLASSSSAAAMVRQGHEQDLEDLRMLERTMHRIHATLKDAEQHWDIRDESAKLRLKELKELAYDAEDLVDEYEYELEVNRCKAEALQPSASVASHKRKWQQEQATLFFPTTSICFCLYYTSSENEVLYHNTGMAHVPEELALKARKLIKRFHEIQYYSDNFTLSENDGERRFAPNIGTLPKNSSVIYAPKIIGREQDKDNIVEKLLSMTSDSVATPVSILAIVGMGGLGKTTLAQLVYNDSRIQGFFDMHAWVCVSEQFDPTYITKSIISSLKKDNSDLSEVCSPHETLAKRIKQKMRLLGSVVRTDEHSKVMYDYSNNNP |
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| Function | Putative disease resistance protein RGA4 [UniProtKB/Swiss-Prot:Q7XA39] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_11G0270000 | OsMH63_11T0270000-mRNA-1 | Chr11 | 20169356 | 20173947 | - | maker | ||
| CDS seq | ATGGCCGGACTGTTTGCCACTCTTGCCATCAGGAAGGCACTGGACAAGCTCTCCTCCATCCTGCCAGCAATAAGCCTATTGGCATCCTCCTCGTCGGCAGCTGCTATGGTGAGGCAAGGGCATGAGCAAGATCTGGAGGACCTCCGGATGCTGGAGCGGACGATGCACAGGATCCACGCGACTCTGAAGGACGCGGAGCAGCACTGGGACATCCGTGATGAAAGCGCCAAGCTGCGGCTCAAGGAGCTCAAGGAGCTAGCGTATGACGCGGAGGACTTGGTGGACGAGTACGAGTACGAGCTCGAGGTGAACCGTTGCAAGGCTGAGGCTCTCCAGCCATCTGCAAGCGTGGCCAGCCACAAGCGTAAGTGGCAACAGGAACAGGCAACACTGTTTTTTCCAACAACTTCGATCTGTTTCTGCCTTTACTATACTTCCTCGGAAAATGAGGTCTTGTACCATAATACTGGTATGGCACATGTTCCAGAAGAGCTGGCTCTTAAAGCAAGGAAACTTATTAAGAGATTCCATGAAATCCAATATTATTCTGATAATTTTACTTTATCGGAGAATGATGGAGAGAGACGGTTTGCTCCTAATATTGGTACTCTACCCAAGAATAGCTCTGTTATATATGCACCGAAAATTATTGGAAGAGAGCAAGACAAGGACAACATTGTAGAAAAGTTGTTGTCCATGACGAGTGACAGTGTAGCTACTCCAGTTTCTATCTTGGCTATTGTCGGTATGGGCGGATTAGGCAAGACAACATTAGCACAGCTTGTATATAACGACTCAAGGATACAAGGGTTTTTTGACATGCATGCATGGGTTTGTGTGTCAGAGCAATTTGATCCTACTTACATAACAAAGAGCATCATAAGTTCATTAAAGAAGGATAATTCTGATCTATCGGAAGTTTGTAGTCCTCATGAGACATTGGCAAAACGAATAAAGCAAAAGATGAGATTGCTGGGATCTGTTGTGCGAACCGATGAACACAGCAAAGTTATGTATGATTATAGTAACAACAACCCGTAG
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| Protein seq | MAGLFATLAIRKALDKLSSILPAISLLASSSSAAAMVRQGHEQDLEDLRMLERTMHRIHATLKDAEQHWDIRDESAKLRLKELKELAYDAEDLVDEYEYELEVNRCKAEALQPSASVASHKRKWQQEQATLFFPTTSICFCLYYTSSENEVLYHNTGMAHVPEELALKARKLIKRFHEIQYYSDNFTLSENDGERRFAPNIGTLPKNSSVIYAPKIIGREQDKDNIVEKLLSMTSDSVATPVSILAIVGMGGLGKTTLAQLVYNDSRIQGFFDMHAWVCVSEQFDPTYITKSIISSLKKDNSDLSEVCSPHETLAKRIKQKMRLLGSVVRTDEHSKVMYDYSNNNP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0.013987 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0492100 | SBH | 0.452033 | 0.992897 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g29920 | SBH | 0.0 | 0.0 | 0.078894 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0492100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0014450 | SBH | 0.0 | 0.0 | 0.241562 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0014420 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0014370 | SBH | 0.087663 | 0.0 | 0.118568 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0014160 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0014510 | RBH | 0.0 | 1.082820 | 1.023822 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0271300 | SBH | 0 | 0.0175305 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0014810 | SBH | 0.0 | 0.204951 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0284100 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0014580 | SBH | 0.0 | 0.028889 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0014570 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0014210 | SBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0014050 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0014320 | RBH | 0.0 | 0.198698 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G014120 | SBH | 0.000000 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0014330 | SBH | 0.117520 | 0.0 | 0.0 |
