Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsMH63_03G0203900 OGI:03032900 | 2/16 Minghui 63 | MH63RS3 | HZAU Chr03:12652032-12655626
Gene Symbol -
DNA seq

ATGCCGCGTCCGCTCGTCACCGCCGCCGCCGACACCGCCGCCGCCGATGCTGTGTCCGCTCGTCGCCGCTGCCAACGAGGCTGCATCCGCTCCTCGCCACCGCTGCCGCCGACGATGCCGCGTCCGCTTGTCGCCGCCGATGCCGCGTCCGCTCGTCGCCGCCGCCGAGGCAGCATCCGGCCGCTCATCGCCGACAAGAACCCCGGCGTTCGCTCATTGCCTCGCCCGCCGCCGATGCTGCGTTCGCTCATCGCCTCCGCCGCCGCCGATGCCGCGTCCGCTCGTCACCTCCCCAGCTGCCACCACCGCCGCCGCGTTCGCTCGTCGTCGCTGCGCCGCCGCGTGGTGGTGGAGCGGGAGGGAGGTGCGGGGAGGTGCGGGAGAAGGCCGAGGGGTACAGGAGAGAGATGGGGGAGAACCGTCTGGGAGGGGATGGCGGAAAAAAATCTGGTGCAGACCGGATGCAAAACAGCAGTCCGTGCAGCCCCAACGCGGATGCATGACGCGTGGATGAGGCGCTCATCCGACGGCCGGCCCACACAAGCGGGTCCGCATCCTGCACGGCTCGACTCAGGTCGTTCTCCCTCAGCTCGGCTTGCGCGGCTCAAGATTAGATTGGGTAGGGTGTGATTAGAGGCGGACGATTAGAGCAAAACAGATTCGCTACATGGCAGGACGAGGAGTCCAGTAGAAGAGCACAGGCGCCGCCGGGCTTCTGGTGCCATCGTCTCATCTGGTGCAGCCTTTGCCTGCCGTAGCGCACGACATGGCAGGACAATCTTCACATGAACACGATGTAATCGTTGGGGATCATGGAGCCGATGGCAAGCAGAGAACGCAGGTACATTGCCTAGCTAATTGACTCATGCTTTTTCATCAGTACATGCATGCATGATCGTGAGTGATCGTCTTACATGCCCTCATCGCAAATACTGATGTGTGGCTAATACGTACTGATATGTGATCATATCGTGCATGATCATCTTGCACAGATCTCCGAGTTTATGACCATGGAAGAAGATGTTGCCGGCGCTATCGATGCCAACGCTAATGGTGATGACAACACACTCTGTCACATAGTACCTGAAGAGATGGCAGATAAAGCACCAAATCAGGTAACGATAATTTAATAGCAAATTCAATGGAAAACAGAATATTTCATACTGTGGTAATATAACTCATTTATCGTACAACAGGCCAATGATAAAGTTGCACAAACTTTGATCTTGCCTCAAGTTGGAATGGCTTTTGATTCAGAGCAGAAAGTGTATGATATGTACAACACCTATGCCGGGAAGATTGGGTTCAGTATTAGAAAGAGCCAAGCAAAGCACCGAGTCAATGGAACTATATACCAGAAATATATAGTTTGTAGTAACCAAGGACAACGACAGACTAAGTCATCACTAGACACTACTAGGACGAGTTGTGATGCTTGTGTTCATTTTAGTATTTGTCGAAAGGGAATTTGGACAGTGCAAAAAGTTGTACTTGAACACAACCATTGTCTTGTTAGTCCAAATAAGTCGCACAAGCTGAGGTCCCAACGGCGTGTTATAGAAGCAGATAGGCAGCTAATTGGCCAAATAAGGGAAGCCGGGATGAAACCAGCGCAAGTGTATGAGTTCATGAAGGAGTGGTATGGAGGAGCTGACAAAGTACCATTCTCAAAGATGGATTGCAATAATGAGATCGGTCGCGAACGCAAGAAGTACTTAGAATCCAATGACACACAAACACTGTTGGAATAGTTGAAGAATAAGCAATTAGAGGATCCTGCATTTTTTTACGCCATCCAAATAGACAAGGAAGATGGTCGGATAGCTAATTTCTTTTGGGCAGATGGTCAATCTATCATGGATTACTCCTGTTTTGGTGATGCTGTGTCATTCGACACCACATTTGATACTAATAAGTTTGAAATGCCTTTTGCTCCACTCCTTGGAACCAACCATCACAAGCAGACTGTAATTTTTGGTGCTGCGTTGTTATTTAATCAAACTATTGAATCACTTGTTTAGCTCTTTGAAACTTTTCTAACAGCAATGTCAGGAAAGCATCCAAGCACAATTTTCACTGATCAAGACGCGGCCATGGCAGCAACAATTGCTTTAGTATTCCCAAACACAAGACACCATCTTTGTTTGTGGCACATTTATCTAAATGGTGGTAAAAATCTTGGTCATGTCATTCATAAGCATCCTAACAAGTTTCTAACTGATTTTAAGAAATGTGTCTATGAGGAGAAAGCGGAGTATCATTTCAACAAGATGTGGCATGAATTGTTGAGTGAATACAAGCTTGAGGATAACGTATGGATGTCAAATCTATATAGGTTGAAGGAAAGTGGTCTATTGTCTTTCGTGACTCTTTTACAGCTGATATGACCTCGACTCAAAGGAGCGAAGGTATGAATAATGTCTTCAAGAAAAGATTTCGTAGGAAACTTGGTCTTTCTGAGCTCCTTGTAGAATGTGATAAGGTTGCTGCCAGTCTTCGTGAAAATGAGTTGGATGCAGATTTTAAGTCAAGAAACTCGAGCCCCGTTACTTGCATCCCAAATTTACCTATGTTGAAGACCGCAGCTGACTCATATACAAGGAAGATGTATTCAGAGTTTGAAGAGGAGTTTACAAAACAATTTTCATTGTCATGTAAGTTGTTGCAAACTGAGGGGTCAATATTGACATTCATGGTTATGCCCATGGAATCAGATCAGGAAGCAACAATTGTGTATAACACTGCGGATATGACCATTACATGTTCTTGCAGAACGTACGAGTCCATTGGTATGTATGCACACTTTAAATCGCATTATAATTTTGTTTATACAAACATCTGAAAAATGGCATCCACATCTTATAGGTATATTGTGCAAGCATGCCCTTAGAGTCTTCAATATGAATGAAGTTTTCACTATGCCATCTCAATATATACTCAACAGGTGGACAAAATATGCGAAAAAAGGATTTAATATTGATAAACAAGGAAGTGAGAAGGAAACTTTGAAAACACATGCTGCACGTATCTCTCGAAAGGCAACATCCATCGCTTTGAAATGTTCAGTTTCGAAAGAACTTCTTGATGATTTGGAGAAAGCCATAAATAATTTGGACTTGGAGGCAGATAGTTCTCTAAGCAAGATGCAAGAAAAAACATGTGAGGTTCCTCTAAATTCAAATGACTGTGTTATGGACACATTAAATGGTGCAATATCAATTAGAGTTCCTCGAGTGGTCAAAGGCCCAAAGAGTAGACGATCAAAAGATGCAGTTGAAAAGAAGAAACGGAAGAAAACAAAAACTGCTAAGAATAAAGGTGCTGATCCTACCCATTCCGGCATGTTTATTCCCATTGTATGCTTGTATAATTAATTTTTTTTATACTCTGATATTTTGTATGTTTGAACTATATAGGAGAAGATCTAAATAATGCATCAGAAGATGAAGATGAAGATGTTGGTGATGTGTGTGGGCAATCTTCGACCATGGCTGCAAATGATGTGTGTGGGCAGCATATGATGTGTATGGGCAATCCTCGACAATGGCTGCATATGATGGGTTTGGGCAATCCTCGACCATGGATGCTCCTTTAA

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CDS seq

ATGCCGCGTCCGCTCGTCACCGCCGCCGCCGACACCGCCGCCGCCGATGCTGTGTCCGCTCGTCGCCGCTGCCAACGAGGCTGCATCCGCTCCTCGCCACCGCTGCCGCCGACGATGCCGCGTCCGCTTGTCGCCGCCGATGCCGCGTCCGCTCGTCGCCGCCGCCGAGGCAGCATCCGGCCGCTCATCGCCGACAAGAACCCCGGCGTTCGCTCATTGCCTCGCCCGCCGCCGATGCTGCGTTCGCTCATCGCCTCCGCCGCCGCCGATGCCGCGTCCGCTCGTCACCTCCCCAGCTGCCACCACCGCCGCCGCGTTCGCTCGTCGTCGCTGCGCCGCCGCGTGGTGGTGGAGCGGGAGGGAGGTGCGGGGAGGTGCGGGAGAAGGCCGAGGGGTACAGGAGAGAGATGGGGGAGAACCGTCTGGGAGGGGATGGCGGAAAAAAATCTGGTGCAGACCGGATGCAAAACAGCAGTCCGTGCAGCCCCAACGCGGATGCATGACGCGTGGATGAGGCGCTCATCCGACGGCCGGCCCACACAAGCGGGTCCGCATCCTGCACGGCTCGACTCAGGTCGTTCTCCCTCAGCTCGGCTTGCGCGGCTCAAGATTAGATTGGGTAGGCCTTTGCCTGCCGTAGCGCACGACATGGCAGGACAATCTTCACATGAACACGATGTAATCGTTGGGGATCATGGAGCCGATGGCAAGCAGAGAACGCAGATCTCCGAGTTTATGACCATGGAAGAAGATGTTGCCGGCGCTATCGATGCCAACGCTAATGGTGATGACAACACACTCTGTCACATAGTACCTGAAGAGATGGCAGATAAAGCACCAAATCAGGCCAATGATAAAGTTGCACAAACTTTGATCTTGCCTCAAGTTGGAATGGCTTTTGATTCAGAGCAGAAAGTGTATGATATGTACAACACCTATGCCGGGAAGATTGGGTTCAGTATTAGAAAGAGCCAAGCAAAGCACCGAGTCAATGGAACTATATACCAGAAATATATAGTTTGTAGTAACCAAGGACAACGACAGACTAAGTCATCACTAGACACTACTAGGACGAGTTGTGATGCTTGTGTTCATTTTAGTATTTGTCGAAAGGGAATTTGGACAGTGCAAAAAGTTGTACTTGAACACAACCATTGTCTTGTTAGTCCAAATAAGTCGCACAAGCTGAGGTCCCAACGGCGTGTTATAGAAGCAGATAGGCAGCTAATTGGCCAAATAAGGGAAGCCGGGATGAAACCAGCGCAAGTGTATGAGTTCATGAAGGAGTGGTATGGAGGAGCTGACAAAGTTGAAGGAAAGTGGTCTATTGTCTTTCGTGACTCTTTTACAGCTGATATGACCTCGACTCAAAGGAGCGAAGGTATGAATAATGTCTTCAAGAAAAGATTTCGTAGGAAACTTGGTCTTTCTGAGCTCCTTGTAGAATGTGATAAGGTTGCTGCCAGTCTTCGTGAAAATGAGTTGGATGCAGATTTTAAGTCAAGAAACTCGAGCCCCGTTACTTGCATCCCAAATTTACCTATGTTGAAGACCGCAGCTGACTCATATACAAGGAAGATGTATTCAGAGTTTGAAGAGGAGTTTACAAAACAATTTTCATTGTCATGTAAGTTGTTGCAAACTGAGGGGTCAATATTGACATTCATGGTTATGCCCATGGAATCAGATCAGGAAGCAACAATTGTGTATAACACTGCGGATATGACCATTACATGTTCTTGCAGAACGTACGAGTCCATTGGTATATTGTGCAAGCATGCCCTTAGAGTCTTCAATATGAATGAAGTTTTCACTATGCCATCTCAATATATACTCAACAGGTGGACAAAATATGCGAAAAAAGGATTTAATATTGATAAACAAGGAAGTGAGAAGGAAACTTTGAAAACACATGCTGCACGTATCTCTCGAAAGGCAACATCCATCGCTTTGAAATGTTCAGTTTCGAAAGAACTTCTTGATGATTTGGAGAAAGCCATAAATAATTTGGACTTGGAGGCAGATAGTTCTCTAAGCAAGATGCAAGAAAAAACATGTGAGGTTCCTCTAAATTCAAATGACTGTGTTATGGACACATTAAATGGTGCAATATCAATTAGAGTTCCTCGAGTGGTCAAAGGCCCAAAGAGTAGACGATCAAAAGATGCAGTTGAAAAGAAGAAACGGAAGAAAACAAAAACTGCTAAGAATAAAGGAGAAGATCTAAATAATGCATCAGAAGATGAAGATGAAGATGTTGGTGATGTGTGTGGGCAATCTTCGACCATGGCTGCAAATGATGTGTGTGGGCAGCATATGATGTGTATGGGCAATCCTCGACAATGGCTGCATATGATGGGTTTGGGCAATCCTCGACCATGGATGCTCCTTTAA

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Protein seq

MPRPLVTAAADTAAADAVSARRRCQRGCIRSSPPLPPTMPRPLVAADAASARRRRRGSIRPLIADKNPGVRSLPRPPPMLRSLIASAAADAASARHLPSCHHRRRVRSSSLRRRVVVEREGGAGRCGRRPRGTGERWGRTVWEGMAEKNLVQTGCKTAVRAAPTRMHDAWMRRSSDGRPTQAGPHPARLDSGRSPSARLARLKIRLGRPLPAVAHDMAGQSSHEHDVIVGDHGADGKQRTQISEFMTMEEDVAGAIDANANGDDNTLCHIVPEEMADKAPNQANDKVAQTLILPQVGMAFDSEQKVYDMYNTYAGKIGFSIRKSQAKHRVNGTIYQKYIVCSNQGQRQTKSSLDTTRTSCDACVHFSICRKGIWTVQKVVLEHNHCLVSPNKSHKLRSQRRVIEADRQLIGQIREAGMKPAQVYEFMKEWYGGADKVEGKWSIVFRDSFTADMTSTQRSEGMNNVFKKRFRRKLGLSELLVECDKVAASLRENELDADFKSRNSSPVTCIPNLPMLKTAADSYTRKMYSEFEEEFTKQFSLSCKLLQTEGSILTFMVMPMESDQEATIVYNTADMTITCSCRTYESIGILCKHALRVFNMNEVFTMPSQYILNRWTKYAKKGFNIDKQGSEKETLKTHAARISRKATSIALKCSVSKELLDDLEKAINNLDLEADSSLSKMQEKTCEVPLNSNDCVMDTLNGAISIRVPRVVKGPKSRRSKDAVEKKKRKKTKTAKNKGEDLNNASEDEDEDVGDVCGQSSTMAANDVCGQHMMCMGNPRQWLHMMGLGNPRPWMLL

Function Protein FAR1-RELATED SEQUENCE 5 [UniProtKB/Swiss-Prot:Q9SZL8]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsMH63_03G0203900 OsMH63_03T0203900.1 Chr03 12652032 12655626 + maker
CDS seq

ATGCCGCGTCCGCTCGTCACCGCCGCCGCCGACACCGCCGCCGCCGATGCTGTGTCCGCTCGTCGCCGCTGCCAACGAGGCTGCATCCGCTCCTCGCCACCGCTGCCGCCGACGATGCCGCGTCCGCTTGTCGCCGCCGATGCCGCGTCCGCTCGTCGCCGCCGCCGAGGCAGCATCCGGCCGCTCATCGCCGACAAGAACCCCGGCGTTCGCTCATTGCCTCGCCCGCCGCCGATGCTGCGTTCGCTCATCGCCTCCGCCGCCGCCGATGCCGCGTCCGCTCGTCACCTCCCCAGCTGCCACCACCGCCGCCGCGTTCGCTCGTCGTCGCTGCGCCGCCGCGTGGTGGTGGAGCGGGAGGGAGGTGCGGGGAGGTGCGGGAGAAGGCCGAGGGGTACAGGAGAGAGATGGGGGAGAACCGTCTGGGAGGGGATGGCGGAAAAAAATCTGGTGCAGACCGGATGCAAAACAGCAGTCCGTGCAGCCCCAACGCGGATGCATGACGCGTGGATGAGGCGCTCATCCGACGGCCGGCCCACACAAGCGGGTCCGCATCCTGCACGGCTCGACTCAGGTCGTTCTCCCTCAGCTCGGCTTGCGCGGCTCAAGATTAGATTGGGTAGGCCTTTGCCTGCCGTAGCGCACGACATGGCAGGACAATCTTCACATGAACACGATGTAATCGTTGGGGATCATGGAGCCGATGGCAAGCAGAGAACGCAGATCTCCGAGTTTATGACCATGGAAGAAGATGTTGCCGGCGCTATCGATGCCAACGCTAATGGTGATGACAACACACTCTGTCACATAGTACCTGAAGAGATGGCAGATAAAGCACCAAATCAGGCCAATGATAAAGTTGCACAAACTTTGATCTTGCCTCAAGTTGGAATGGCTTTTGATTCAGAGCAGAAAGTGTATGATATGTACAACACCTATGCCGGGAAGATTGGGTTCAGTATTAGAAAGAGCCAAGCAAAGCACCGAGTCAATGGAACTATATACCAGAAATATATAGTTTGTAGTAACCAAGGACAACGACAGACTAAGTCATCACTAGACACTACTAGGACGAGTTGTGATGCTTGTGTTCATTTTAGTATTTGTCGAAAGGGAATTTGGACAGTGCAAAAAGTTGTACTTGAACACAACCATTGTCTTGTTAGTCCAAATAAGTCGCACAAGCTGAGGTCCCAACGGCGTGTTATAGAAGCAGATAGGCAGCTAATTGGCCAAATAAGGGAAGCCGGGATGAAACCAGCGCAAGTGTATGAGTTCATGAAGGAGTGGTATGGAGGAGCTGACAAAGTTGAAGGAAAGTGGTCTATTGTCTTTCGTGACTCTTTTACAGCTGATATGACCTCGACTCAAAGGAGCGAAGGTATGAATAATGTCTTCAAGAAAAGATTTCGTAGGAAACTTGGTCTTTCTGAGCTCCTTGTAGAATGTGATAAGGTTGCTGCCAGTCTTCGTGAAAATGAGTTGGATGCAGATTTTAAGTCAAGAAACTCGAGCCCCGTTACTTGCATCCCAAATTTACCTATGTTGAAGACCGCAGCTGACTCATATACAAGGAAGATGTATTCAGAGTTTGAAGAGGAGTTTACAAAACAATTTTCATTGTCATGTAAGTTGTTGCAAACTGAGGGGTCAATATTGACATTCATGGTTATGCCCATGGAATCAGATCAGGAAGCAACAATTGTGTATAACACTGCGGATATGACCATTACATGTTCTTGCAGAACGTACGAGTCCATTGGTATATTGTGCAAGCATGCCCTTAGAGTCTTCAATATGAATGAAGTTTTCACTATGCCATCTCAATATATACTCAACAGGTGGACAAAATATGCGAAAAAAGGATTTAATATTGATAAACAAGGAAGTGAGAAGGAAACTTTGAAAACACATGCTGCACGTATCTCTCGAAAGGCAACATCCATCGCTTTGAAATGTTCAGTTTCGAAAGAACTTCTTGATGATTTGGAGAAAGCCATAAATAATTTGGACTTGGAGGCAGATAGTTCTCTAAGCAAGATGCAAGAAAAAACATGTGAGGTTCCTCTAAATTCAAATGACTGTGTTATGGACACATTAAATGGTGCAATATCAATTAGAGTTCCTCGAGTGGTCAAAGGCCCAAAGAGTAGACGATCAAAAGATGCAGTTGAAAAGAAGAAACGGAAGAAAACAAAAACTGCTAAGAATAAAGGAGAAGATCTAAATAATGCATCAGAAGATGAAGATGAAGATGTTGGTGATGTGTGTGGGCAATCTTCGACCATGGCTGCAAATGATGTGTGTGGGCAGCATATGATGTGTATGGGCAATCCTCGACAATGGCTGCATATGATGGGTTTGGGCAATCCTCGACCATGGATGCTCCTTTAA

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Protein seq

MPRPLVTAAADTAAADAVSARRRCQRGCIRSSPPLPPTMPRPLVAADAASARRRRRGSIRPLIADKNPGVRSLPRPPPMLRSLIASAAADAASARHLPSCHHRRRVRSSSLRRRVVVEREGGAGRCGRRPRGTGERWGRTVWEGMAEKNLVQTGCKTAVRAAPTRMHDAWMRRSSDGRPTQAGPHPARLDSGRSPSARLARLKIRLGRPLPAVAHDMAGQSSHEHDVIVGDHGADGKQRTQISEFMTMEEDVAGAIDANANGDDNTLCHIVPEEMADKAPNQANDKVAQTLILPQVGMAFDSEQKVYDMYNTYAGKIGFSIRKSQAKHRVNGTIYQKYIVCSNQGQRQTKSSLDTTRTSCDACVHFSICRKGIWTVQKVVLEHNHCLVSPNKSHKLRSQRRVIEADRQLIGQIREAGMKPAQVYEFMKEWYGGADKVEGKWSIVFRDSFTADMTSTQRSEGMNNVFKKRFRRKLGLSELLVECDKVAASLRENELDADFKSRNSSPVTCIPNLPMLKTAADSYTRKMYSEFEEEFTKQFSLSCKLLQTEGSILTFMVMPMESDQEATIVYNTADMTITCSCRTYESIGILCKHALRVFNMNEVFTMPSQYILNRWTKYAKKGFNIDKQGSEKETLKTHAARISRKATSIALKCSVSKELLDDLEKAINNLDLEADSSLSKMQEKTCEVPLNSNDCVMDTLNGAISIRVPRVVKGPKSRRSKDAVEKKKRKKTKTAKNKGEDLNNASEDEDEDVGDVCGQSSTMAANDVCGQHMMCMGNPRQWLHMMGLGNPRPWMLL

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0042745 0 0.0036115

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_03g0164400 SBH 1.428469 1.610354 0.751788
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g21660 RBH 0.531714 0.477253 0.053735
Nipponbare | IRGSP 1.0 | RAP-db Os03g0164400 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_03g0016530 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_03g0011210 SBH 0.466272 3.167680 2.300830
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_03g0011230 SBH 2.450686 4.062182 10.586390
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_03g0011190 SBH 0.487191 0.145784 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_03g0011060 SBH 20.003649 13.831558 31.208485
Minghui 63 | MH63RS3 | HZAU NA NA NA NA NA
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_03g0010950 SBH 0.753618 0.426699 1.898163
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0139400 SBH 10.158635 31.7793865 22.183712
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0011100 SBH 0.600309 0.167845 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0011180 SBH 0.909900 10.064088 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_03g0011150 SBH 11.719020 14.357782 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_03g0011130 SBH 1.925406 0.774064 2.528367
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_03g0011060 SBH 0.666507 8.575606 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G011050 SBH 2.252840 3.288694 5.838352
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0010920 SBH 3.987265 13.868951 7.863033
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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