Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0155700 | OGI:03024830 | 2/16 | Minghui 63 | MH63RS3 | HZAU | Chr03:9409583-9412445 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GGTCAAACGGGCTCGCGGTCAGCCCATGCCAGTGAAAATGGCCCACAAATATCCTCATTGCCGTGCGCCGCCGTTTGTTGCTCTGTTTCTGGAGGGAAAAAAGGGCGCCATTATACTCGGATGGAGGGAAAAAAAGACCATTCGGCTGCTGTTCTTACGGCGATGAAGATGGTGAGCGAGCAACAAGAAGCTTTTCTCCACTTGATCGTAAGTCTGCACTAGTTACCTATCTTCTTCTATATCCTTCATGAATAGCTTCTTAGAATTCATCAAACTCCCCTTGTTAGGTTGCTCCCCTTGCCATCAAAGAAACATCAGACTGAAGATACAAATCAAGTTATGCCATCTAACTCGTGAGATGGAAGGAGATAGGTTTGTAATACATCTCCATGCTCGTATATTCTTTTCCTTTTTGTCATATGTATGCACTAGTCTCATATTTTTTTATAGAGAAATGCTAGTACCATGTTCTGTACCTGACATTGGAATGGAATTCAAAAGTCCAGATGAGGCTTGGATATTTTGGCATCACTATGGAGGTCAAAAAGGCTTTGAGGTCAGGAAAAGGTACACAAACAAAAGACAATCATATGACAAAGTTACATCATTTAGATATGTTTGTGGAAATGAGGGTCATCGAGGACAAGACAAGAGGGATCATCTAACAAAGTGTCCCCGAGCTGAAACCCGCACTGATTGTCAAGTCCGCATGGGTGTAGTATTGGACAAAAAGACGGAAAAGTATAAAGTGACTAACCTGGTTTGGAACACAATCACTCCTTGCATTTGCCTGAAACCTTGCACTTGATGGTTTCACAAAGGAAAATTTCAGATTTACAAGCTTTTGAAATTGAAACAGCTGATGATGCAGGAATTGGGCTAAAGGCAGCACATGAGTTGGCTAGTCGCCAAGTCGGTGGATCACATAGTCTTAGCTATAGCCTTCGTGATCGCAAGAATTATTTGCGGAGCAAGCGGCAAAGAGAGATGGCATATGGTCAGGCAGGTAGCATGCTTATGTATTTCCAGGATAAAATTGCTGAGAACCCATCATTCCAATATGCATTGCAAATGGACAGTGAAGAACAGATAGCAAATATTTTCTGGGCTGATGCTAAGATGATAAGTGACTATGCACATTTTGGGGATGTTGTTAGTTTTGATACTACTTTTGGAACAAACAATGAGAGCAGGCCTTTTGGTGTCTTTGTTGGATTCAATCATTTTAGAGAAACAGTAGTTTTTGGTGCTGCTCTCATGTATGATGAAACATTCGACTCTTTCAAGTGGCTCTTTGAGACTTTTCTAAAAGCACATAATGGGAAGCATCCCAAAACAATATATACAGATCAAGATATAGCAATGGGAAAGGCCATTGAGGAAGTATTTCCTGCAGCATGGCATGGATTGTGCACCTTCCATATTTCACAAAATGCTGCAAAACATCTATCGCAAGGGAATAATGGAGAATCAAGTATTCTTTCAGATTTTAGCGCATGCATGTATGAGTATGAGGATGTGACAAAATTTGAATATGAATTTAACATCATGAGGGAAAAGGTGAGCAAGCAAACTTGGCTAGATAGTATATACAAGTTGAAAGAAAAATGGGATGAATCTTATATGAGGAATGTTTTCACATTGGGAATGAGAAGTACGCAATTGAGTGAGAGTTCAACAATGACCTGAAAATTCATTTCAAATCTGATTTTGATATCATTCATTTTTTCAAGCATTTTGAAAGAGTGGTGCAAGGAAAAAGAAATACGGAACTAGCTTCCGAATTTGATTCAAGGAAAAAATTGCCTAGAATCAAAATGAGAACACCTATGCTGCTGCAAGCTAGCAAGGTGTACACCCCTATTATATTTGAAGCTTTTAAAGGGGAATATGAGAGATCAATGGCTGCATGCACTAAAGCATTGGATGGCGATAGTGAATTTCTAGTATCAATTGGGAGTTTTGAGGGAGATCTAACATTTGAGGAGGAGTAAAGAGTTGTTGGTGATCCTTCAGAGCAGACATCTATTTGCAGCTGTGGGCAATTTAATAGGATTGGAATATTGTGTGGGCATGCTCTAAAGGTTCTTGATTTGATGAACATCAAGTCACTTCCAGCACAATATATATTAAAGCGATGGACACGGGAAGCAAGGAGTGGAATAGTAACGGACAGCAAGGGAATAAATATAATTGAGAACCCAATGATGGAAGCTTCCCTTCGCTACAAATTTCTATCCCACAGGTTTCTCACTTTGGCCCAACAAGCTGCTAGCTATCCTGAGTGCACATTGTTAGTAAATAATACACTTGACATTCTTAGCAAGCAAATTGAAGAGCACCTCAATGGATGTGCTAGTACTTCAGATCAAAGTGCAACCCACAAGGAGGTTATACCCCCAAATAACTTGTTGAGTAATGCACGCCTAAAGAAAAAGGAGGTTCATGTTAGAAGTTTAAAGCGAAAAAGAAATTGGCTTGATAAAAAACGAGACACTACACAAAAACGACAAAGTAAAAAAGGGTAAAAGTCCGAATGTATGTTCTAAAAAGATATTGCAATACCATGTTACTATTCAGTCATGTGTTCACTTCATCCTTTTACATTATTTGGTTCGAATGAACAAAAGACTAGGCAAAATGCACTCCATGTTGGTGCAGCAACACAAGTGGCAGAAGATAGTTTTGCTATGGACAAGGAGGAGCCTGGAGAATACATGCACCTAAATAGCTTCACTCAGCTTTTGACGGTAATACATGCACCTAAATAGCTATGAAAATATATAATAAAACAATCAATGATTAATCTTTTTCTTTGTAGGGGCAGATAAATGATGATCTTTTAGTTGACGATGCATTTTAG
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| CDS seq | GGTCAAACGGGCTCGCGGTCAGCCCATGCCAGTGAAAATGGCCCACAAATATCCTCATTGCCGTGCGCCGCCGTTTGTTGCTCTGTTTCTGGAGGGAAAAAAGGGCGCCATTATACTCGGATGGAGGGAAAAAAAGACCATTCGGCTGCTGTTCTTACGGCGATGAAGATGGTGAGCGAGCAACAAGAAGCTTTTCTCCACTTGATCATGAGGCTTGGATATTTTGGCATCACTATGGAGGTCAAAAAGGCTTTGAGGTCAGGAAAAGATTTACAAGCTTTTGAAATTGAAACAGCTGATGATGCAGGAATTGGGCTAAAGGCAGCACATGAGTTGGCTAGTCGCCAAGTCGGTGGATCACATAGTCTTAGCTATAGCCTTCGTGATCGCAAGAATTATTTGCGGAGCAAGCGGCAAAGAGAGATGGCATATGGTCAGGCAGGTAGCATGCTTATGTATTTCCAGGATAAAATTGCTGAGAACCCATCATTCCAATATGCATTGCAAATGGACAGTGAAGAACAGATAGCAAATATTTTCTGGGCTGATGCTAAGATGATAAGTGACTATGCACATTTTGGGGATGTTGTTAGTTTTGATACTACTTTTGGAACAAACAATGAGAGCAGGCCTTTTGGTGTCTTTGTTGGATTCAATCATTTTAGAGAAACAGTAGTTTTTGGTGCTGCTCTCATGTATGATGAAACATTCGACTCTTTCAAGTGGCTCTTTGAGACTTTTCTAAAAGCACATAATGGGAAGCATCCCAAAACAATATATACAGATCAAGATATAGCAATGGGAAAGGCCATTGAGGAACATTTTGAAAGAGTGGTGCAAGGAAAAAGAAATACGGAACTAGCTTCCGAATTTGATTCAAGGAAAAAATTGCCTAGAATCAAAATGAGAACACCTATGCTGCTGCAAGCTAGCAAGGTGTACACCCCTATTATATTTGAAGCTTTTAAAGGGGAATATGAGAGATCAATGGCTGCATGCACTAAAGCATTGGATGGCGATAGTGAATTTCTAGTATCAATTGGGAGTTTTGAGGGAGATCTAACATTTGAGGAGGAAGTTGTTGGTGATCCTTCAGAGCAGACATCTATTTGCAGCTGTGGGCAATTTAATAGGATTGGAATATTGTGTGGGCATGCTCTAAAGGTTCTTGATTTGATGAACATCAAGTCACTTCCAGCACAATATATATTAAAGCGATGGACACGGGAAGCAAGGAGTGGAATAGTAACGGACAGCAAGGGAATAAATATAATTGAGAACCCAATGATGGAAGCTTCCCTTCGCTACAAATTTCTATCCCACAGGTTTCTCACTTTGGCCCAACAAGCTGCTAGCTATCCTGAGTGCACATTGTTAGTAAATAATACACTTGACATTCTTAGCAAGCAAATTGAAGAGCACCTCAATGGATGTGCTAGTACTTCAGATCAAAGTGCAACCCACAAGGAGGTTATACCCCCAAATAACTTGTTGAGTAATGCACGCCTAAAGAAAAAGGAGACTAGGCAAAATGCACTCCATGTTGGTGCAGCAACACAAGTGGCAGAAGATAGTTTTGCTATGGACAAGGAGGAGCCTGGAGAATACATGCACCTAAATAGCTTCACTCAGCTTTTGACGGGGCAGATAAATGATGATCTTTTAGTTGACGATGCATTTTAG
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| Protein seq | GQTGSRSAHASENGPQISSLPCAAVCCSVSGGKKGRHYTRMEGKKDHSAAVLTAMKMVSEQQEAFLHLIMRLGYFGITMEVKKALRSGKDLQAFEIETADDAGIGLKAAHELASRQVGGSHSLSYSLRDRKNYLRSKRQREMAYGQAGSMLMYFQDKIAENPSFQYALQMDSEEQIANIFWADAKMISDYAHFGDVVSFDTTFGTNNESRPFGVFVGFNHFRETVVFGAALMYDETFDSFKWLFETFLKAHNGKHPKTIYTDQDIAMGKAIEEHFERVVQGKRNTELASEFDSRKKLPRIKMRTPMLLQASKVYTPIIFEAFKGEYERSMAACTKALDGDSEFLVSIGSFEGDLTFEEEVVGDPSEQTSICSCGQFNRIGILCGHALKVLDLMNIKSLPAQYILKRWTREARSGIVTDSKGINIIENPMMEASLRYKFLSHRFLTLAQQAASYPECTLLVNNTLDILSKQIEEHLNGCASTSDQSATHKEVIPPNNLLSNARLKKKETRQNALHVGAATQVAEDSFAMDKEEPGEYMHLNSFTQLLTGQINDDLLVDDAF |
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| Function | Protein FAR1-RELATED SEQUENCE 5 [UniProtKB/Swiss-Prot:Q9SZL8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0155700 | OsMH63_03T0155700-mRNA-1 | Chr03 | 9409583 | 9412445 | + | maker | ||
| CDS seq | GGTCAAACGGGCTCGCGGTCAGCCCATGCCAGTGAAAATGGCCCACAAATATCCTCATTGCCGTGCGCCGCCGTTTGTTGCTCTGTTTCTGGAGGGAAAAAAGGGCGCCATTATACTCGGATGGAGGGAAAAAAAGACCATTCGGCTGCTGTTCTTACGGCGATGAAGATGGTGAGCGAGCAACAAGAAGCTTTTCTCCACTTGATCATGAGGCTTGGATATTTTGGCATCACTATGGAGGTCAAAAAGGCTTTGAGGTCAGGAAAAGATTTACAAGCTTTTGAAATTGAAACAGCTGATGATGCAGGAATTGGGCTAAAGGCAGCACATGAGTTGGCTAGTCGCCAAGTCGGTGGATCACATAGTCTTAGCTATAGCCTTCGTGATCGCAAGAATTATTTGCGGAGCAAGCGGCAAAGAGAGATGGCATATGGTCAGGCAGGTAGCATGCTTATGTATTTCCAGGATAAAATTGCTGAGAACCCATCATTCCAATATGCATTGCAAATGGACAGTGAAGAACAGATAGCAAATATTTTCTGGGCTGATGCTAAGATGATAAGTGACTATGCACATTTTGGGGATGTTGTTAGTTTTGATACTACTTTTGGAACAAACAATGAGAGCAGGCCTTTTGGTGTCTTTGTTGGATTCAATCATTTTAGAGAAACAGTAGTTTTTGGTGCTGCTCTCATGTATGATGAAACATTCGACTCTTTCAAGTGGCTCTTTGAGACTTTTCTAAAAGCACATAATGGGAAGCATCCCAAAACAATATATACAGATCAAGATATAGCAATGGGAAAGGCCATTGAGGAACATTTTGAAAGAGTGGTGCAAGGAAAAAGAAATACGGAACTAGCTTCCGAATTTGATTCAAGGAAAAAATTGCCTAGAATCAAAATGAGAACACCTATGCTGCTGCAAGCTAGCAAGGTGTACACCCCTATTATATTTGAAGCTTTTAAAGGGGAATATGAGAGATCAATGGCTGCATGCACTAAAGCATTGGATGGCGATAGTGAATTTCTAGTATCAATTGGGAGTTTTGAGGGAGATCTAACATTTGAGGAGGAAGTTGTTGGTGATCCTTCAGAGCAGACATCTATTTGCAGCTGTGGGCAATTTAATAGGATTGGAATATTGTGTGGGCATGCTCTAAAGGTTCTTGATTTGATGAACATCAAGTCACTTCCAGCACAATATATATTAAAGCGATGGACACGGGAAGCAAGGAGTGGAATAGTAACGGACAGCAAGGGAATAAATATAATTGAGAACCCAATGATGGAAGCTTCCCTTCGCTACAAATTTCTATCCCACAGGTTTCTCACTTTGGCCCAACAAGCTGCTAGCTATCCTGAGTGCACATTGTTAGTAAATAATACACTTGACATTCTTAGCAAGCAAATTGAAGAGCACCTCAATGGATGTGCTAGTACTTCAGATCAAAGTGCAACCCACAAGGAGGTTATACCCCCAAATAACTTGTTGAGTAATGCACGCCTAAAGAAAAAGGAGACTAGGCAAAATGCACTCCATGTTGGTGCAGCAACACAAGTGGCAGAAGATAGTTTTGCTATGGACAAGGAGGAGCCTGGAGAATACATGCACCTAAATAGCTTCACTCAGCTTTTGACGGGGCAGATAAATGATGATCTTTTAGTTGACGATGCATTTTAG
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| Protein seq | GQTGSRSAHASENGPQISSLPCAAVCCSVSGGKKGRHYTRMEGKKDHSAAVLTAMKMVSEQQEAFLHLIMRLGYFGITMEVKKALRSGKDLQAFEIETADDAGIGLKAAHELASRQVGGSHSLSYSLRDRKNYLRSKRQREMAYGQAGSMLMYFQDKIAENPSFQYALQMDSEEQIANIFWADAKMISDYAHFGDVVSFDTTFGTNNESRPFGVFVGFNHFRETVVFGAALMYDETFDSFKWLFETFLKAHNGKHPKTIYTDQDIAMGKAIEEHFERVVQGKRNTELASEFDSRKKLPRIKMRTPMLLQASKVYTPIIFEAFKGEYERSMAACTKALDGDSEFLVSIGSFEGDLTFEEEVVGDPSEQTSICSCGQFNRIGILCGHALKVLDLMNIKSLPAQYILKRWTREARSGIVTDSKGINIIENPMMEASLRYKFLSHRFLTLAQQAASYPECTLLVNNTLDILSKQIEEHLNGCASTSDQSATHKEVIPPNNLLSNARLKKKETRQNALHVGAATQVAEDSFAMDKEEPGEYMHLNSFTQLLTGQINDDLLVDDAF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0164400 | SBH | 1.428469 | 1.610354 | 0.751788 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g16540 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0164400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0016530 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0016360 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0016400 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0016380 | SBH | 0.051611 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0011060 | SBH | 20.003649 | 13.831558 | 31.208485 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0010950 | SBH | 0.753618 | 0.426699 | 1.898163 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0070000 | SBH | 5.266263 | 7.6928585 | 16.883605 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0011100 | SBH | 0.600309 | 0.167845 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0011180 | SBH | 0.909900 | 10.064088 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0011150 | SBH | 11.719020 | 14.357782 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0011130 | SBH | 1.925406 | 0.774064 | 2.528367 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0011060 | SBH | 0.666507 | 8.575606 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G011050 | SBH | 2.252840 | 3.288694 | 5.838352 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0010920 | SBH | 3.987265 | 13.868951 | 7.863033 |
