Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_03G0070000 | OGI:03011410 | 3/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr03:4212453-4218083 | ||||||||
| Gene Symbol | GATA22, OsGATA22 | ||||||||||
| DNA seq | AGAGCGTTCGTCACTCGCATCTCCTCCGCCTCCGGTATCCAACCTCCCGCACCAAATCCCAATCCGGATCCCCCACGCTAAACCCTAGCTTTAAACCCCCGAATCCAACCAATCCCCGCGCCGATTCCCGCCATTTCGCGCACCTCGTGCCAGGATCTGCTCCTGGGCGGCGCTCTTTTAGAAAAAAACCTGGCAGATTTCGACTTCTGCAATGGAGCCCGTCGATTTCGGTGGGGGAAAAGGTTATGGAAGGAATCTCTGTCTGAGCAACGATCTGATCCTTCTGGAGTAAGGTTTTGTGCTGGGTGGATTTGGGATTCGATGTGGCTGGAGTTGAGCTCATCTCGGGGAGAAGGGATTCGGACGGTGTTTGATCTTTCTGTCGTGATTGCTTTGCTTCGGGTTTGCTCAGCGCTAGAAGATTTGCTCGCAGAATCCCGCGCGGAGTTTTGAAGAAAGCTTGGTATTTCCTGGTTCGTTGTGGTTTGTAAGCGATGCAGTTCGAGGACGGGGGAGATGTTCATGTTGGTGCCGGTGAGGGTGAAGATGGTGGCAGGGTCACAGTGGATGAGCTTACCAGGTGAAGAATTTTTCTTTCTTTTTTATTTTTACCGTATCCTACATTCAGCAGTTCAGCATCGAGATTTCATATGTGCAATGTTTGGGTGAAAAGCTAACGTGCCAAGCTAGTTATAACTGTAGCTAGGGCCTACCCTCCATAATATAGTTTTTTTTTTTTGAAACCGTCCCTCCATAATATAGTGACCTAGTAACGGACGAGACATTTCATAGTACAATAAATCTAACATGCTCTTGTCTAGATTTATTGTAATATGAAATATTGAAATGTCTCATCCAGTACTAAGTTGCTATATTATTAGACGGAGGGAGTACGAGATATCACGAGAGAAGAGAGCTCTGGATGTTAGTACTATTTAGTACCCTTTTGCAGTTCTTTTCTTTTCCCAATTCTAGTCTTCTGTAGTTATGGTTAAGCGAGACCGGATTCAAATTTAGAAGAGTAACACTTCCTCGAGTCAGTATTACTTGTCGTTTCAGACAGGGAAATACTACTAAGTGCAAATCAATTCCACTACCTGAAACATCATATATTTCCGTCCGGAGGGAGTAGTAGCTGATCATCAATGCCTTTTCTCAGATCGGGTTATGAAAGCAATAAAATTATCAAAGGCTGTCTGTCGGTCCATGCATATGGTGGAATGTTAGTATTGCACACTGACTACTTAGCATGTTGGTGACTACTATACTACTCAGTACTATCAACATTCAGCAGCATGCTGGAAATTGATACAGATCATTTTCTCTTGAATCAAGGACTCAATTATTCATGGTAGTGAGACGATTCCTAACTTTTATGTTATAGTTTTTCAGATGCCTACGTTGTGGCATCAGTGCAAATGCGACGCCTCATATGCGCCGTGGACCAGAGGGACGGAGAACTTTATGCAATGCTTGTGGTATAGCATGGGCAAAGGTATTCTAATTGTTCTCCACCACTTATTGTTTATACTCGCTCCAATTCCAAATGTAAGTCGTTTTGGTTTTCTACATGCAGGGAAAAGTGCGAAAAGTTATTGATTCTGATACCCCCATGGATAATGCCATGTTTGCACAAATGGTTCCAGAACTTAGCATGGAATTCGATGACGAAGATAAAGCATATGAGTTCTACAACAGGTACGCTGGACATGTGGGATTCAGTGTTCGTAAAAGTTCATCGGACAAATCAGCTGAAAACATCACAAGGTCAAGAACCTTTGTATGCTCGAGAGAAGGTTTTCGTAAGGACAAGAAAGGAGCTAAGGAAGTTAAAAGACCACGGCCAGAAACAAGAATAGGGTGTCCTGCACGAATGTCAATTAAGATTACATCTGATGGTAAATATCGTATATCTGAATTCGTACCAGATCATAACCATCAGCCAGCACCCCCATCAACCATGCATATGCTGAGGTCTCAGAGAGTACTCACTGAGCTGCAAACAACTGAAGCAGACTCCTTAGAAGATTCAGCGACACCATCAAGGTTTTCTAGTTGCTCTTTGGTGAAGCAAGCAGAAGTAATTACTCATACCAATTTTCTCCCTGCTGAATACAGGTGCTCTCTTTGTTCAAAGCGCAAGAAAAATATGCAACCTGGTGATGCAGGAGTAACTGTAAAGTACCTGCAAAGCATGCAGCTAAGCAACCCTTCTTTCTTTTATGCTGTCCAGCTTGATGAGGATGACAAACTGACAAACATTTTCTGGGCCGATTCCAAATCTAGAACCGACTTCAGCTACTACAGTGACGTGGTTTGTTTGGACACAACCTACAAGATAAATGAACATAGCAGACCATTAACACTATTCCTTGGAGTGAACCACCACAAGCAAATCTCCATATTTGGTGCTGCCTTGCTTTATGATGAATCAGAAGAGTCTTTCAAGTGGCTATTTGATACATTCAAGATTGCTGCAAATGGAAAGCAACCAAAAACAATCTTGACAGATTGGTCTATGGCAGCAACTACGGCTTCTGCGATAACAGCAGCATGGCCTGGAACAGTTCATCGCCTTTGTCCATGGCAAGTGTACCAAAACTCTGTCAAGCACCTTAATCACATCTTTCAAGGCTCCAAAACATTTGCAAAGGATTTCGGAAAATGCGTTTATGACTACGATGACGAAGAGAACTTCTTGCTTGGATGGAATACTATGCTAGAGAAGTATGATCTACGAAACAATGAGTGGATTAAAAAAATATTTGATGATCGTGATAAATGGTCTCCAGTATACAATCGCCATGTATTCACTGCAGATATAAAAAGTTCTTTGCAGTCGGAAAGTGTTAGAAATGCCTTGAAGAAGTCCTTGAGTCCACAATTTGACCTGTTATCTTTCTTTAAGCACTATGAAAGAATGCTTGATGAGTTTCGTTATGCAGAGTTACAAGCTGATTTTCATGCAAGCCAAAGCTTCCCTAGAATTCCTCCATCCAAAATGCTGAGACAGGCTGCTAACATGTACACACCAGTGGTCTTTGAAATTTTTCGCAGGGAGTTTGAGATGTTTGTCGATTCCGTGATTTATAGCTGTGGGGAGGATGGAAATGCATTCGAATATAGAGTAGCAGTAACAGATAGGCCTGGGGAACACTATGTTAGGTTTGACTCTGGCGACTTATCTGTTGTATGCAGTTGTAAAAAATTTGAAGCAATGGGTATCCAGTGTTGCCATGTGTTGAAAGTTCTAGATTTCAGAAATATAAAGGAGTTACCACAAAAATATTTCATGAAAAGATGGAAGAAGGCTGTCAAGTCTGCAAGTACAGGCAATCAAGAACTTCTGAATGGAGGAGTTTCACAAATTCCCAGCTCTTATTTGAATGTTCCCGTGCCATTTATAGATCCACAACATGTGCAATCAAATAACGAGCTTAACCATGTAAGTTGATCAAATATAACTATTCATTAAGTTTATTTTTTATCCTTAGTAAAGGTTGAGGTTCAATATGCGTGATCAACTACAGGACACTTCTGTTTCTAACTCCCACCAGCAGGCCCTTCATGGAGGTGCACAGGGAAGTCAGGTAAGACCCCTTGGTAGAACTGAACTCACTTGTGCAATACTTAATTTCTAAAAGCAATATTGGTGCTTTTGCTCTTCTCATAGTATTTTGTATGCACCGCCTTCTGAGGCAAGCAATCCATTAAGTTTGTATGCACTCAAATTTTGTTAGAAAAATATTCTCAAGATCGCCACATTCCATGGTTGTATACGATTTGAGACCACTGGTGACAAAAGAATACGCTCACATCTTTTTGTGCATTTCTGGCTTTTAGATATACAGAAGATTAGTACTCCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCCCACATTCATATTGATGTTAATGAATCTAGACATATATATCTATCTAAATTCATTAACATCAATATGTATGTGGGAAATGCTAGAATGACTTACATTGTGGAACGGAGGAAGTATCTATTAATTGGAACACTCAATATAAGTAAATTAGACTCATGATTATATGGAAGATTTTTTTAATTTGCCTTTCTGACTTTTGGTTGTTTTACAGGGTTATGCTCCCTTAGCAGGGATTCAGCAGCAGCAGTTTATTGGAAATTTTCGCCTGAACCATGAAACAGGTTTCTTATGAAAAACAGAACTGGCGCTTTTGCCCTGTTCTTGTCTTCCAAAAACTTTTTTGCTCTGTTATTCCAAAGACAATGACACAAGACATCGAAACAGTCTCTAGTCTCTACCTTTACATCTCCCTTGTAAATTCTAATTCATATTTCGTAGCATCACAAATATACAAGCTCAATAGTTTTCAGGAAACTACGTTCAGAGTTTAAACGCTGTTGGACCTTGGAGGAAGTACCCGCTAAGACATAAGTCTGATTATTGGCCTAAAATAAGGTTGTATTATTAGCATATGTGATGTAGTATATACAGACATACAGTTCGTAGTTCTGGTGATTTTGCAGAAGCTTTCAATTGCTTCGCTGCCAAATGGCCACTTCAACCATGCACTCTTTTAATCTAATGCTCTCACTGTTTCCAATTTTCAGTGTTGGCGTGGTGGATTATTTGAATTTCCTTATTAGGATCTTCTATTACTCTCATAGTAGTACCACTGCTAGAAAATGTTTTCTTAAAGAAAAAGGTACTTTCAGAATGCTACATGTTTTGGATAGCCATATTTCCACAACCTGACTGACGTCTGTGGTTACTGATTACCTAACCAGATAATCAAATCCATGTGCCTGCATTACTCAAAGGAAGACGATTTCCCACTGCTGATGAACTATGTTGTCTCCTTGCCATTTGGAACAAGTTCAGTACAGAAGACAATCAAACTATTTTGCAGTCAGGTTTCAGCGTTGACGAGCGTACCATTGTCTGAATTACTCCACGTCTGCAAAAACATAATATGAAAAAGAGAAGCACAACCACAACCACCTGACGAAACAAAACTGAAATTTGAAGTACATGTACTAGCAAATACTTCTACTTCTCCTGTCCAAATCATCGTATTACGCACTATCACACACACACACGATCTACAGTACGCGGTAGAGATCAAGAAATGAGACGGCGTCAAAATGGGAACAAAAGATAGGAATAAGATAAGAAAATGATGTGTTGTTCGGTTCTTCGGTGAAGCTCCGAAGGATGTTCTTGGATTGCTCTCCTGGTCTGTCATGGGTGTTTCTGACGAATTTGATGATCGCTGTTCCTGAGACAATCAAACAAATTGCAGCCGATGGAAAAGATGGCCTTAATAAGCTGTTAATTCGTTGGCGTTGACAGCTTTGGTCACATCAAAATACCATTTCATCCCTTCCAGACTCTACATGTTTACTGATGAATCCACATCACAAAAATACACAAACGCTACCTCCAAACCAAATACATGAAGCCTAACAAGTTTCTACCTCCATTTGTCGAAGGTGTCGTTCTTTCTCTGTGTATATTTAGTTTATACTAGGTATGCAATGACTCAAAAATTGCCATAGATTTACTCCTGCAGAGATGAACTGTAAAGAGAGTACAGCACATAATTATCAGTTCAGAAAAAAAGAAGAGTGAATAATC
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| CDS seq | ATGCAGTTCGAGGACGGGGGAGATGTTCATGTTGGTGCCGGTGAGGGTGAAGATGGTGGCAGGGTCACAGTGGATGAGCTTACCAGATGCCTACGTTGTGGCATCAGTGCAAATGCGACGCCTCATATGCGCCGTGGACCAGAGGGACGGAGAACTTTATGCAATGCTTGTGGTATAGCATGGGCAAAGGGAAAAGTGCGAAAAGTTATTGATTCTGATACCCCCATGGATAATGCCATGTTTGCACAAATGGTTCCAGAACTTAGCATGGAATTCGATGACGAAGATAAAGCATATGAGTTCTACAACAGGTACGCTGGACATGTGGGATTCAGTGTTCGTAAAAGTTCATCGGACAAATCAGCTGAAAACATCACAAGGTCAAGAACCTTTGTATGCTCGAGAGAAGGTTTTCGTAAGGACAAGAAAGGAGCTAAGGAAGTTAAAAGACCACGGCCAGAAACAAGAATAGGGTGTCCTGCACGAATGTCAATTAAGATTACATCTGATGGTAAATATCGTATATCTGAATTCGTACCAGATCATAACCATCAGCCAGCACCCCCATCAACCATGCATATGCTGAGGTCTCAGAGAGTACTCACTGAGCTGCAAACAACTGAAGCAGACTCCTTAGAAGATTCAGCGACACCATCAAGGTTTTCTAGTTGCTCTTTGGTGAAGCAAGCAGAAGTAATTACTCATACCAATTTTCTCCCTGCTGAATACAGGTGCTCTCTTTGTTCAAAGCGCAAGAAAAATATGCAACCTGGTGATGCAGGAGTAACTGTAAAGTACCTGCAAAGCATGCAGCTAAGCAACCCTTCTTTCTTTTATGCTGTCCAGCTTGATGAGGATGACAAACTGACAAACATTTTCTGGGCCGATTCCAAATCTAGAACCGACTTCAGCTACTACAGTGACGTGGTTTGTTTGGACACAACCTACAAGATAAATGAACATAGCAGACCATTAACACTATTCCTTGGAGTGAACCACCACAAGCAAATCTCCATATTTGGTGCTGCCTTGCTTTATGATGAATCAGAAGAGTCTTTCAAGTGGCTATTTGATACATTCAAGATTGCTGCAAATGGAAAGCAACCAAAAACAATCTTGACAGATTGGTCTATGGCAGCAACTACGGCTTCTGCGATAACAGCAGCATGGCCTGGAACAGTTCATCGCCTTTGTCCATGGCAAGTGTACCAAAACTCTGTCAAGCACCTTAATCACATCTTTCAAGGCTCCAAAACATTTGCAAAGGATTTCGGAAAATGCGTTTATGACTACGATGACGAAGAGAACTTCTTGCTTGGATGGAATACTATGCTAGAGAAGTATGATCTACGAAACAATGAGTGGATTAAAAAAATATTTGATGATCGTGATAAATGGTCTCCAGTATACAATCGCCATGTATTCACTGCAGATATAAAAAGTTCTTTGCAGTCGGAAAGTGTTAGAAATGCCTTGAAGAAGTCCTTGAGTCCACAATTTGACCTGTTATCTTTCTTTAAGCACTATGAAAGAATGCTTGATGAGTTTCGTTATGCAGAGTTACAAGCTGATTTTCATGCAAGCCAAAGCTTCCCTAGAATTCCTCCATCCAAAATGCTGAGACAGGCTGCTAACATGTACACACCAGTGGTCTTTGAAATTTTTCGCAGGGAGTTTGAGATGTTTGTCGATTCCGTGATTTATAGCTGTGGGGAGGATGGAAATGCATTCGAATATAGAGTAGCAGTAACAGATAGGCCTGGGGAACACTATGTTAGGTTTGACTCTGGCGACTTATCTGTTGTATGCAGTTGTAAAAAATTTGAAGCAATGGGTATCCAGTGTTGCCATGTGTTGAAAGTTCTAGATTTCAGAAATATAAAGGAGTTACCACAAAAATATTTCATGAAAAGATGGAAGAAGGCTGTCAAGTCTGCAAGTACAGGCAATCAAGAACTTCTGAATGGAGGAGTTTCACAAATTCCCAGCTCTTATTTGAATGTTCCCGTGCCATTTATAGATCCACAACATGTGCAATCAAATAACGAGCTTAACCATGACACTTCTGTTTCTAACTCCCACCAGCAGGCCCTTCATGGAGGTGCACAGGGAAGTCAGGGTTATGCTCCCTTAGCAGGGATTCAGCAGCAGCAGTTTATTGGAAATTTTCGCCTGAACCATGAAACAGGTTTCTTATGA
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| Protein seq | MQFEDGGDVHVGAGEGEDGGRVTVDELTRCLRCGISANATPHMRRGPEGRRTLCNACGIAWAKGKVRKVIDSDTPMDNAMFAQMVPELSMEFDDEDKAYEFYNRYAGHVGFSVRKSSSDKSAENITRSRTFVCSREGFRKDKKGAKEVKRPRPETRIGCPARMSIKITSDGKYRISEFVPDHNHQPAPPSTMHMLRSQRVLTELQTTEADSLEDSATPSRFSSCSLVKQAEVITHTNFLPAEYRCSLCSKRKKNMQPGDAGVTVKYLQSMQLSNPSFFYAVQLDEDDKLTNIFWADSKSRTDFSYYSDVVCLDTTYKINEHSRPLTLFLGVNHHKQISIFGAALLYDESEESFKWLFDTFKIAANGKQPKTILTDWSMAATTASAITAAWPGTVHRLCPWQVYQNSVKHLNHIFQGSKTFAKDFGKCVYDYDDEENFLLGWNTMLEKYDLRNNEWIKKIFDDRDKWSPVYNRHVFTADIKSSLQSESVRNALKKSLSPQFDLLSFFKHYERMLDEFRYAELQADFHASQSFPRIPPSKMLRQAANMYTPVVFEIFRREFEMFVDSVIYSCGEDGNAFEYRVAVTDRPGEHYVRFDSGDLSVVCSCKKFEAMGIQCCHVLKVLDFRNIKELPQKYFMKRWKKAVKSASTGNQELLNGGVSQIPSSYLNVPVPFIDPQHVQSNNELNHDTSVSNSHQQALHGGAQGSQGYAPLAGIQQQQFIGNFRLNHETGFL |
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| Function | Protein FAR1-RELATED SEQUENCE 5 [UniProtKB/Swiss-Prot:Q9SZL8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_03G0070000 | OsZS97_03T0070000.1 | Chr03 | 4212453 | 4218083 | + | makerRMon | ||
| CDS seq | ATGCAGTTCGAGGACGGGGGAGATGTTCATGTTGGTGCCGGTGAGGGTGAAGATGGTGGCAGGGTCACAGTGGATGAGCTTACCAGATGCCTACGTTGTGGCATCAGTGCAAATGCGACGCCTCATATGCGCCGTGGACCAGAGGGACGGAGAACTTTATGCAATGCTTGTGGTATAGCATGGGCAAAGGGAAAAGTGCGAAAAGTTATTGATTCTGATACCCCCATGGATAATGCCATGTTTGCACAAATGGTTCCAGAACTTAGCATGGAATTCGATGACGAAGATAAAGCATATGAGTTCTACAACAGGTACGCTGGACATGTGGGATTCAGTGTTCGTAAAAGTTCATCGGACAAATCAGCTGAAAACATCACAAGGTCAAGAACCTTTGTATGCTCGAGAGAAGGTTTTCGTAAGGACAAGAAAGGAGCTAAGGAAGTTAAAAGACCACGGCCAGAAACAAGAATAGGGTGTCCTGCACGAATGTCAATTAAGATTACATCTGATGGTAAATATCGTATATCTGAATTCGTACCAGATCATAACCATCAGCCAGCACCCCCATCAACCATGCATATGCTGAGGTCTCAGAGAGTACTCACTGAGCTGCAAACAACTGAAGCAGACTCCTTAGAAGATTCAGCGACACCATCAAGGTTTTCTAGTTGCTCTTTGGTGAAGCAAGCAGAAGTAATTACTCATACCAATTTTCTCCCTGCTGAATACAGGTGCTCTCTTTGTTCAAAGCGCAAGAAAAATATGCAACCTGGTGATGCAGGAGTAACTGTAAAGTACCTGCAAAGCATGCAGCTAAGCAACCCTTCTTTCTTTTATGCTGTCCAGCTTGATGAGGATGACAAACTGACAAACATTTTCTGGGCCGATTCCAAATCTAGAACCGACTTCAGCTACTACAGTGACGTGGTTTGTTTGGACACAACCTACAAGATAAATGAACATAGCAGACCATTAACACTATTCCTTGGAGTGAACCACCACAAGCAAATCTCCATATTTGGTGCTGCCTTGCTTTATGATGAATCAGAAGAGTCTTTCAAGTGGCTATTTGATACATTCAAGATTGCTGCAAATGGAAAGCAACCAAAAACAATCTTGACAGATTGGTCTATGGCAGCAACTACGGCTTCTGCGATAACAGCAGCATGGCCTGGAACAGTTCATCGCCTTTGTCCATGGCAAGTGTACCAAAACTCTGTCAAGCACCTTAATCACATCTTTCAAGGCTCCAAAACATTTGCAAAGGATTTCGGAAAATGCGTTTATGACTACGATGACGAAGAGAACTTCTTGCTTGGATGGAATACTATGCTAGAGAAGTATGATCTACGAAACAATGAGTGGATTAAAAAAATATTTGATGATCGTGATAAATGGTCTCCAGTATACAATCGCCATGTATTCACTGCAGATATAAAAAGTTCTTTGCAGTCGGAAAGTGTTAGAAATGCCTTGAAGAAGTCCTTGAGTCCACAATTTGACCTGTTATCTTTCTTTAAGCACTATGAAAGAATGCTTGATGAGTTTCGTTATGCAGAGTTACAAGCTGATTTTCATGCAAGCCAAAGCTTCCCTAGAATTCCTCCATCCAAAATGCTGAGACAGGCTGCTAACATGTACACACCAGTGGTCTTTGAAATTTTTCGCAGGGAGTTTGAGATGTTTGTCGATTCCGTGATTTATAGCTGTGGGGAGGATGGAAATGCATTCGAATATAGAGTAGCAGTAACAGATAGGCCTGGGGAACACTATGTTAGGTTTGACTCTGGCGACTTATCTGTTGTATGCAGTTGTAAAAAATTTGAAGCAATGGGTATCCAGTGTTGCCATGTGTTGAAAGTTCTAGATTTCAGAAATATAAAGGAGTTACCACAAAAATATTTCATGAAAAGATGGAAGAAGGCTGTCAAGTCTGCAAGTACAGGCAATCAAGAACTTCTGAATGGAGGAGTTTCACAAATTCCCAGCTCTTATTTGAATGTTCCCGTGCCATTTATAGATCCACAACATGTGCAATCAAATAACGAGCTTAACCATGACACTTCTGTTTCTAACTCCCACCAGCAGGCCCTTCATGGAGGTGCACAGGGAAGTCAGGGTTATGCTCCCTTAGCAGGGATTCAGCAGCAGCAGTTTATTGGAAATTTTCGCCTGAACCATGAAACAGGTTTCTTATGA
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| Protein seq | MQFEDGGDVHVGAGEGEDGGRVTVDELTRCLRCGISANATPHMRRGPEGRRTLCNACGIAWAKGKVRKVIDSDTPMDNAMFAQMVPELSMEFDDEDKAYEFYNRYAGHVGFSVRKSSSDKSAENITRSRTFVCSREGFRKDKKGAKEVKRPRPETRIGCPARMSIKITSDGKYRISEFVPDHNHQPAPPSTMHMLRSQRVLTELQTTEADSLEDSATPSRFSSCSLVKQAEVITHTNFLPAEYRCSLCSKRKKNMQPGDAGVTVKYLQSMQLSNPSFFYAVQLDEDDKLTNIFWADSKSRTDFSYYSDVVCLDTTYKINEHSRPLTLFLGVNHHKQISIFGAALLYDESEESFKWLFDTFKIAANGKQPKTILTDWSMAATTASAITAAWPGTVHRLCPWQVYQNSVKHLNHIFQGSKTFAKDFGKCVYDYDDEENFLLGWNTMLEKYDLRNNEWIKKIFDDRDKWSPVYNRHVFTADIKSSLQSESVRNALKKSLSPQFDLLSFFKHYERMLDEFRYAELQADFHASQSFPRIPPSKMLRQAANMYTPVVFEIFRREFEMFVDSVIYSCGEDGNAFEYRVAVTDRPGEHYVRFDSGDLSVVCSCKKFEAMGIQCCHVLKVLDFRNIKELPQKYFMKRWKKAVKSASTGNQELLNGGVSQIPSSYLNVPVPFIDPQHVQSNNELNHDTSVSNSHQQALHGGAQGSQGYAPLAGIQQQQFIGNFRLNHETGFL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_03G0070000 | OsZS97_03T0070000.2 | Chr03 | 4212453 | 4218083 | + | makerRMon | ||
| CDS seq | ATGCAGTTCGAGGACGGGGGAGATGTTCATGTTGGTGCCGGTGAGGGTGAAGATGGTGGCAGGGTCACAGTGGATGAGCTTACCAGATGCCTACGTTGTGGCATCAGTGCAAATGCGACGCCTCATATGCGCCGTGGACCAGAGGGACGGAGAACTTTATGCAATGCTTGTGGTATAGCATGGGCAAAGGGAAAAGTGCGAAAAGTTATTGATTCTGATACCCCCATGGATAATGCCATGTTTGCACAAATGGTTCCAGAACTTAGCATGGAATTCGATGACGAAGATAAAGCATATGAGTTCTACAACAGGTACGCTGGACATGTGGGATTCAGTGTTCGTAAAAGTTCATCGGACAAATCAGCTGAAAACATCACAAGGTCAAGAACCTTTGTATGCTCGAGAGAAGGTTTTCGTAAGGACAAGAAAGGAGCTAAGGAAGTTAAAAGACCACGGCCAGAAACAAGAATAGGGTGTCCTGCACGAATGTCAATTAAGATTACATCTGATGGTAAATATCGTATATCTGAATTCGTACCAGATCATAACCATCAGCCAGCACCCCCATCAACCATGCATATGCTGAGGTCTCAGAGAGTACTCACTGAGCTGCAAACAACTGAAGCAGACTCCTTAGAAGATTCAGCGACACCATCAAGGTTTTCTAGTTGCTCTTTGGTGAAGCAAGCAGAAGTAATTACTCATACCAATTTTCTCCCTGCTGAATACAGGTGCTCTCTTTGTTCAAAGCGCAAGAAAAATATGCAACCTGGTGATGCAGGAGTAACTGTAAAGTACCTGCAAAGCATGCAGCTAAGCAACCCTTCTTTCTTTTATGCTGTCCAGCTTGATGAGGATGACAAACTGACAAACATTTTCTGGGCCGATTCCAAATCTAGAACCGACTTCAGCTACTACAGTGACGTGGTTTGTTTGGACACAACCTACAAGATAAATGAACATAGCAGACCATTAACACTATTCCTTGGAGTGAACCACCACAAGCAAATCTCCATATTTGGTGCTGCCTTGCTTTATGATGAATCAGAAGAGTCTTTCAAGTGGCTATTTGATACATTCAAGATTGCTGCAAATGGAAAGCAACCAAAAACAATCTTGACAGATTGGTCTATGGCAGCAACTACGGCTTCTGCGATAACAGCAGCATGGCCTGGAACAGTTCATCGCCTTTGTCCATGGCAAGTGTACCAAAACTCTGTCAAGCACCTTAATCACATCTTTCAAGGCTCCAAAACATTTGCAAAGGATTTCGGAAAATGCGTTTATGACTACGATGACGAAGAGAACTTCTTGCTTGGATGGAATACTATGCTAGAGAAGTATGATCTACGAAACAATGAGTGGATTAAAAAAATATTTGATGATCGTGATAAATGGTCTCCAGTATACAATCGCCATGTATTCACTGCAGATATAAAAAGTTCTTTGCAGTCGGAAAGTGTTAGAAATGCCTTGAAGAAGTCCTTGAGTCCACAATTTGACCTGTTATCTTTCTTTAAGCACTATGAAAGAATGCTTGATGAGTTTCGTTATGCAGAGTTACAAGCTGATTTTCATGCAAGCCAAAGCTTCCCTAGAATTCCTCCATCCAAAATGCTGAGACAGGCTGCTAACATGTACACACCAGTGGTCTTTGAAATTTTTCGCAGGGAGTTTGAGATGTTTGTCGATTCCGTGATTTATAGCTGTGGGGAGGATGGAAATGCATTCGAATATAGAGTAGCAGTAACAGATAGGCCTGGGGAACACTATGTTAGGTTTGACTCTGGCGACTTATCTGTTGTATGCAGTTGTAAAAAATTTGAAGCAATGGGTATCCAGTGTTGCCATGTGTTGAAAGTTCTAGATTTCAGAAATATAAAGGAGTTACCACAAAAATATTTCATGAAAAGATGGAAGAAGGCTGTCAAGTCTGCAAGTACAGGCAATCAAGAACTTCTGAATGGAGGAGTTTCACAAATTCCCAGCTCTTATTTGAATGTTCCCGTGCCATTTATAGATCCACAACATGTGCAATCAAATAACGAGCTTAACCATGACACTTCTGTTTCTAACTCCCACCAGCAGGCCCTTCATGGAGGTGCACAGGGAAGTCAGGGTTATGCTCCCTTAGCAGGGATTCAGCAGCAGCAGTTTATTGGAAATTTTCGCCTGAACCATGAAACAGGTTTCTTATGA
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| Protein seq | MQFEDGGDVHVGAGEGEDGGRVTVDELTRCLRCGISANATPHMRRGPEGRRTLCNACGIAWAKGKVRKVIDSDTPMDNAMFAQMVPELSMEFDDEDKAYEFYNRYAGHVGFSVRKSSSDKSAENITRSRTFVCSREGFRKDKKGAKEVKRPRPETRIGCPARMSIKITSDGKYRISEFVPDHNHQPAPPSTMHMLRSQRVLTELQTTEADSLEDSATPSRFSSCSLVKQAEVITHTNFLPAEYRCSLCSKRKKNMQPGDAGVTVKYLQSMQLSNPSFFYAVQLDEDDKLTNIFWADSKSRTDFSYYSDVVCLDTTYKINEHSRPLTLFLGVNHHKQISIFGAALLYDESEESFKWLFDTFKIAANGKQPKTILTDWSMAATTASAITAAWPGTVHRLCPWQVYQNSVKHLNHIFQGSKTFAKDFGKCVYDYDDEENFLLGWNTMLEKYDLRNNEWIKKIFDDRDKWSPVYNRHVFTADIKSSLQSESVRNALKKSLSPQFDLLSFFKHYERMLDEFRYAELQADFHASQSFPRIPPSKMLRQAANMYTPVVFEIFRREFEMFVDSVIYSCGEDGNAFEYRVAVTDRPGEHYVRFDSGDLSVVCSCKKFEAMGIQCCHVLKVLDFRNIKELPQKYFMKRWKKAVKSASTGNQELLNGGVSQIPSSYLNVPVPFIDPQHVQSNNELNHDTSVSNSHQQALHGGAQGSQGYAPLAGIQQQQFIGNFRLNHETGFL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_03G0070000 | OsZS97_03T0070000.3 | Chr03 | 4212453 | 4217692 | + | makerRMon | ||
| CDS seq | ATGCGCCGTGGACCAGAGGGACGGAGAACTTTATGCAATGCTTGTGGTATAGCATGGGCAAAGGGAAAAGTGCGAAAAGTTATTGATTCTGATACCCCCATGGATAATGCCATGTTTGCACAAATGGTTCCAGAACTTAGCATGGAATTCGATGACGAAGATAAAGCATATGAGTTCTACAACAGGTACGCTGGACATGTGGGATTCAGTGTTCGTAAAAGTTCATCGGACAAATCAGCTGAAAACATCACAAGGTCAAGAACCTTTGTATGCTCGAGAGAAGGTTTTCGTAAGGACAAGAAAGGAGCTAAGGAAGTTAAAAGACCACGGCCAGAAACAAGAATAGGGTGTCCTGCACGAATGTCAATTAAGATTACATCTGATGGTAAATATCGTATATCTGAATTCGTACCAGATCATAACCATCAGCCAGCACCCCCATCAACCATGCATATGCTGAGGTCTCAGAGAGTACTCACTGAGCTGCAAACAACTGAAGCAGACTCCTTAGAAGATTCAGCGACACCATCAAGGTTTTCTAGTTGCTCTTTGGTGAAGCAAGCAGAAGTAATTACTCATACCAATTTTCTCCCTGCTGAATACAGGTGCTCTCTTTGTTCAAAGCGCAAGAAAAATATGCAACCTGGTGATGCAGGAGTAACTGTAAAGTACCTGCAAAGCATGCAGCTAAGCAACCCTTCTTTCTTTTATGCTGTCCAGCTTGATGAGGATGACAAACTGACAAACATTTTCTGGGCCGATTCCAAATCTAGAACCGACTTCAGCTACTACAGTGACGTGGTTTGTTTGGACACAACCTACAAGATAAATGAACATAGCAGACCATTAACACTATTCCTTGGAGTGAACCACCACAAGCAAATCTCCATATTTGGTGCTGCCTTGCTTTATGATGAATCAGAAGAGTCTTTCAAGTGGCTATTTGATACATTCAAGATTGCTGCAAATGGAAAGCAACCAAAAACAATCTTGACAGATTGGTCTATGGCAGCAACTACGGCTTCTGCGATAACAGCAGCATGGCCTGGAACAGTTCATCGCCTTTGTCCATGGCAAGTGTACCAAAACTCTGTCAAGCACCTTAATCACATCTTTCAAGGCTCCAAAACATTTGCAAAGGATTTCGGAAAATGCGTTTATGACTACGATGACGAAGAGAACTTCTTGCTTGGATGGAATACTATGCTAGAGAAGTATGATCTACGAAACAATGAGTGGATTAAAAAAATATTTGATGATCGTGATAAATGGTCTCCAGTATACAATCGCCATGTATTCACTGCAGATATAAAAAGTTCTTTGCAGTCGGAAAGTGTTAGAAATGCCTTGAAGAAGTCCTTGAGTCCACAATTTGACCTGTTATCTTTCTTTAAGCACTATGAAAGAATGCTTGATGAGTTTCGTTATGCAGAGTTACAAGCTGATTTTCATGCAAGCCAAAGCTTCCCTAGAATTCCTCCATCCAAAATGCTGAGACAGGCTGCTAACATGTACACACCAGTGGTCTTTGAAATTTTTCGCAGGGAGTTTGAGATGTTTGTCGATTCCGTGATTTATAGCTGTGGGGAGGATGGAAATGCATTCGAATATAGAGTAGCAGTAACAGATAGGCCTGGGGAACACTATGTTAGGTTTGACTCTGGCGACTTATCTGTTGTATGCAGTTGTAAAAAATTTGAAGCAATGGGTATCCAGTGTTGCCATGTGTTGAAAGTTCTAGATTTCAGAAATATAAAGGAGTTACCACAAAAATATTTCATGAAAAGATGGAAGAAGGCTGTCAAGTCTGCAAGTACAGGCAATCAAGAACTTCTGAATGGAGGAGTTTCACAAATTCCCAGCTCTTATTTGAATGTTCCCGTGCCATTTATAGATCCACAACATGTGCAATCAAATAACGAGCTTAACCATGACACTTCTGTTTCTAACTCCCACCAGCAGGCCCTTCATGGAGGTGCACAGGGAAGTCAGGGTTATGCTCCCTTAGCAGGGATTCAGCAGCAGCAGTTTATTGGAAATTTTCGCCTGAACCATGAAACAGGTTTCTTATGA
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| Protein seq | MRRGPEGRRTLCNACGIAWAKGKVRKVIDSDTPMDNAMFAQMVPELSMEFDDEDKAYEFYNRYAGHVGFSVRKSSSDKSAENITRSRTFVCSREGFRKDKKGAKEVKRPRPETRIGCPARMSIKITSDGKYRISEFVPDHNHQPAPPSTMHMLRSQRVLTELQTTEADSLEDSATPSRFSSCSLVKQAEVITHTNFLPAEYRCSLCSKRKKNMQPGDAGVTVKYLQSMQLSNPSFFYAVQLDEDDKLTNIFWADSKSRTDFSYYSDVVCLDTTYKINEHSRPLTLFLGVNHHKQISIFGAALLYDESEESFKWLFDTFKIAANGKQPKTILTDWSMAATTASAITAAWPGTVHRLCPWQVYQNSVKHLNHIFQGSKTFAKDFGKCVYDYDDEENFLLGWNTMLEKYDLRNNEWIKKIFDDRDKWSPVYNRHVFTADIKSSLQSESVRNALKKSLSPQFDLLSFFKHYERMLDEFRYAELQADFHASQSFPRIPPSKMLRQAANMYTPVVFEIFRREFEMFVDSVIYSCGEDGNAFEYRVAVTDRPGEHYVRFDSGDLSVVCSCKKFEAMGIQCCHVLKVLDFRNIKELPQKYFMKRWKKAVKSASTGNQELLNGGVSQIPSSYLNVPVPFIDPQHVQSNNELNHDTSVSNSHQQALHGGAQGSQGYAPLAGIQQQQFIGNFRLNHETGFL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 5.266263 | 7.6928585 | 16.883605 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0181600 | RBH | 0.904452 | 0.919453 | 2.112373 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g08370 | RBH | 0.609474 | 0.598096 | 0.469367 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0181600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0011370 | SBH | 0.939774 | 9.366602 | 6.925453 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0016360 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0011230 | SBH | 2.450686 | 4.062182 | 10.586390 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0016380 | SBH | 0.051611 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0016150 | SBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0069800 | RBH | 3.059623 | 3.8336965 | 7.750927 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0016030 | SBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0426100 | RBH | 5.740925 | 14.107781 | 14.686185 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0011100 | SBH | 0.600309 | 0.167845 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0011180 | SBH | 0.909900 | 10.064088 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0016340 | SBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0011130 | SBH | 1.925406 | 0.774064 | 2.528367 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0011060 | SBH | 0.666507 | 8.575606 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G016100 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0010920 | SBH | 3.987265 | 13.868951 | 7.863033 |
