Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_02g0008720 | OGI:02018260 | 1/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr02:6443695-6447305 | ||||||||
| Gene Symbol | RLCK65, OsRLCK65 | ||||||||||
| DNA seq | tcaaactatttttcctccactggaaagatcaacaaatgcttgcttgatggagtttatttcagtggaaacctgcgccatccctaacctgtccttcggtgatgccatggagcacatgagtgccaccttaaccagtgggaggacgcaactttgcatcagttcggagtttccaccatccaaatcgttgtgtagcatgttggggtctaaaatctcagttactctgtggggaaatgcagcatccacacgatcgtggaggctcaaaccatcattgaatttttcatcagttggacgctttccagttaatatctctaacaacaccactccatagctgtagacatcacccttcgttgatatttgcccacccattccgtactctgcattttcatttgaaaacataagaatggcgaatggaggaaaactacaatccatgtaacattggataagttaataagatggctgaagcatacaggtcaataaatcagtataagtttccaattactctcacctggtgcaatatatccaatggatccttttaagtcagccaaacttgtagagttaccaggcgctgctgttgaattagcacccataaatcttgccaacccaaagtcactgacatatgcagtcatttcaagatccaaaagaacattgcttggtttgatgtcacaatgtattagtggggatacacactggttgtgaagataatctaaagcgtatgcaatgtccaaggctaagctaatcctttcacccaaagttaggaatctctttttaccatgtccatggtcctctggatgtagccacatttccagacttccatttggcatatactgaaagacaagtgctttaaaatcatagccatttggatcaatcgtagagcataaagtaatgattttgacaagatttcgatggcgaatatatcttaatgcctcgcactccgcattgaagcttgtgggtgctccgtacttgttaagatcgaaaaccttaatagcaactggattggtctcaaacggcaacatgcccttgtaaacagccccaaaggatcccaaaccaaccaaatttgtgggagagaacccatctgttgcattggcaatcttcatatgatatcttcctcatgttcacactggattgctgcaaagatggtttttgttttcttctcttgatgagaacagccattaaacataacaataaaattacaacagacactgtgattggaattactattttcaaaatagtagacttgtgtttactttgtgatcctgattcacggcaaaggggcaggctataccctggatcattcgcacacaatctgtagtttccatccaagatagccctgctagcattaccaaagacaccatttgatggtattggcccttcaaagtcattgaatgaaatgttgagtttctgcaaagaacttaagagagtgaggaactctggaacttttcctgacaagctgttacgagagagatccagctccttgatgctttttaagttcatgaaagattgtggaatgcttccagtaagaaggttcccttccatgtgaaggtattccaaaagcacacaattccctagagtggacggtatttccccggtcaagcgattgtttgaaatactgatgcttccaagatttatgaggttgccaatttctagtggtatgggcccagtaaacaaattgtgggacaagtccaaactttgtgacagggaagaaatgttgaagacctcacttggcaggcttccaccgaatgaattgtgggacaaatcaagcttctctaattgtctccactgccctaagtttgaaggtatgctcccattgaagttgttcccatctagatgaaactcggttagttgggcaaggttgccaatagaatcaggaataaggcctgagaggttattttgtgccaagcttagaaccagtaagttgctaagatttccaatggtaggtgggatgctccttctaaacatattctcatccaaatacagaacactgagactcttaagattaccaatctctgatggaattgtcccagaaagtctgttttgcctgagccacaaccagttgagctgtgagggaagattaccgactgagctaggcaaggttccttggagaaaatttgcatccaaggccaactttttcagttgaggtgcagtttgcaagggatgagaggaagctccagtcccctgcttcaagctggttgtatccaagatcaaggtcctgcaagtttggcaaggatccaaaagatggcactataccagtgagaccagcagcagcaagataaaccatttctagcttggacatattacgaagagaagctgggatcggcccatttaactgtgttgttgataggattaatgcttcaaggtttggaagtctgttgcctatatctggtggtagttggccgatgagtgagttattggccatgctaagatatttcaaagatgatatgttgaaaatagcctgtggcacatgaccagacaaattgttgtatgtgagaactagcctctctagggttgggatcttacttaggctctcagggatgctccccaccaagttatttgcttttaaagaaacatgaaccaaggaagaaaggttgcccagtgaggctggtatccctcctgtgagtttattctgctctaaagtaaagtatggaaccaactaagttgttacggtccaggtaaatggttgtcaatgtggagctgttgaagagggctggagggatctcccctgtaagactattttgcgtgagcctaagcacttgaagggatgagctatttgccaagaactctgggattcctcctgtgagctgattgcccccaagattaacatatacaaaagatgggctactgcccaacaatggtggtatgtcacctctgagggcgttgctagagagatccaaagttttcagctcaggaagcgtcccaaatccagtgggtatactgccttcaagcttgttgttgtatagtatagcttgctggaggtgagtgcattgggttaagctttgtggtatctcaccttggagggagttgttcgataagccgagtaccttgagattgctgcatgaggacagctcatctggaatacggccttcaagggagttgatgctcaagttcaggtagctgatttgtctcaagcgtccgagctcacttggaatttttccaaggaacgcgtttcttgataagtcaaggcttgcgatggagctcagattggcaatgcaaggtggtattgaaccactgaggcctttggagctgacgttgagcgccatgactcggggttgggtctgggtgttgttgcatgaaacaccctgccagctgcagaagttcagggatgtattggtccaagagcttaaagctccattaggatcagagatttgggacttgaagcagagcagggcttctctatcagtgtctgtgtcatcactgattgctaatggcagggaacttgagaagatgaagacagccaagagaggaatgagttttgggaaggaagcaaacaagcgtatcattttgttgttggtgctgagcgcagtgaggcttgctattttgcttatggctaatatgtaggaggaggcacgcacttgccttatatttctgtactccaaggaaatcgggctactgcttctagc
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| CDS seq | atgatacgcttgtttgcttccttcccaaaactcattcctctcttggctgtcttcatcttctcaagttccctgccattagcaatcagtgatgacacagacactgatagagaagccctgctctgcttcaagtcccaaatctctgatcctaatggagctttaagctcttggaccaatacatccctgaacttctgcagctggcagggtgtttcatgcaacaacacccagacccaaccccgagtcatggcgctcaacgtcagctccaaaggcctcagtggttcaataccaccttgcattgccaatctgagctccatcgcaagccttgacttatcaagaaacgcgttccttggaaaaattccaagtgagctcggacgcttgagacaaatcagctacctgaacttgagcatcaactcccttgaaggccgtattccagatgagctgtcctcatgcagcaatctcaaggtactcggcttatcgaacaactccctccaaggtgagataccacaaagcttaacccaatgcactcacctccagcaagctatactatacaacaacaagcttgaaggcagtatacccactggatttgggacgcttcctgagctgaaaactttggatctctctagcaacgccctcagaggtgacataccaccattgttgggcagtagcccatcttttgtatatgttaatcttgggggcaatcagctcacaggaggaatcccagagttcttggcaaatagctcatcccttcaagtgcttaggctcacgcaaaatagtcttacaggggagatccctccagccctcttcaacagctccacattgacaaccatttacctggacccaaataacttggtggggagcatccctgagagcctaagtaagatcccaaccctagagaggctagttctcacatacaacaatttgtctggtcatgtgccacaggctattttcaacatatcatctttgaaatatcttagcatggccaataactcactcatcggccaactaccaccagatataggcaacagacttccaaaccttgaagcattaatcctatcaacaacacagttaaatgggccgatcccagcttctcttcgtaatatgtccaagctagaaatgtgccatcttttggatccttgccaaacttgcaggaccttgatcttggatacaaccagcttgaagcaggggactggagcttcctctcatcccttgcaaactgcacctcaactgaaaaagttggccttggatgcaaattttctccaaggaaccttgcctagctcagtcggtaatcttccctcacagctcaactggttgtggctcaggcaaaacagactttctgggacaattccatcagagattggtaatcttaagagtctcagtgttctgtatttggatgagaatatgtttagaaggagcatcccacctaccattggaaatcttagcaacttactggttctaagcttggcacaaaataacctctcaggccttattcctgattctattggcaaccttgcccaactaaccgagtttcatctagatgggaacaacttcaatgggagcataccttcaaacttagggcagtggagacaattagagaagcttgatttgtcccacaattcattcggtggaagcctgccaagtgaggtcttcaacatttcttccctgtcacaaagtttggacttgtcccacaatttgtttactgggcccataccactagaaattggcaacctcataaatcttggaagcatcagtatttcaaacaatcgcttgaccggggaaataccgtccactctagggaattgtgtgcttttggaataccttcacatggaagggaaccttcttactggaagcattccacaatctttcatgaacttaaaaagcatcaaggagctggatctctctcgtaacagcttgtcaggaaaagttccagagttcctcactctcttaagttctttgcagaaactcaacatttcattcaatgactttgaagggccaataccatcaaatggtgtctttggtaatgctagcagggctatcttggatggaaactacagattgtgtgcgaatgatccagggtatagcctgcccctttgccgtgaatcaggatcacaaaatgggttctctcccacaaatttggttggtttgggatcctttggggctgtttacaagggcatgttgccgtttgagaccaatccagttgctattaaggttttcgatcttaacaagtacggagcacccacaagcttcaatgcggagtgcgaggcattaagatatattcgccatcgaaatcttgtcaaaatcattactttatgctctacgattgatccaaatggctatgattttaaagcacttgtctttcagtatatgccaaatggaagtctggaaatgtggctacatccagaggaccatggacatggtaaaaagagattcctaactttgggtgaaaggattagcttagccttggacattgcatacgctttagattatcttcacaaccagtgtgtatccccactaatacattgtgacatcaaaccaagcaatgttcttttggatcttgaaatgactgcatatgtcagtgactttgggttggcaagatttatgggtgctaattcaacagcagcgcctggtaactctacaagtttggctgacttaaaaggatccattggatatattgcaccagagtacggaatgggtgggcaaatatcaacgaagggtgatgtctacagctatggagtggtgttgttagagatattaactggaaagcgtccaactgatgaaaaattcaatgatggtttgagcctccacgatcgtgtggatgctgcatttccccacagagtaactgagattttagaccccaacatgctacacaacgatttggatggtggaaactccgaactgatgcaaagttgcgtcctcccactggttaaggtggcactcatgtgctccatggcatcaccgaaggacaggttagggatggcgcaggtttccactgaaataaactccatcaagcaagcatttgttgatctttccagtggaggaaaaatagtttga
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| Protein seq | MIRLFASFPKLIPLLAVFIFSSSLPLAISDDTDTDREALLCFKSQISDPNGALSSWTNTSLNFCSWQGVSCNNTQTQPRVMALNVSSKGLSGSIPPCIANLSSIASLDLSRNAFLGKIPSELGRLRQISYLNLSINSLEGRIPDELSSCSNLKVLGLSNNSLQGEIPQSLTQCTHLQQAILYNNKLEGSIPTGFGTLPELKTLDLSSNALRGDIPPLLGSSPSFVYVNLGGNQLTGGIPEFLANSSSLQVLRLTQNSLTGEIPPALFNSSTLTTIYLDPNNLVGSIPESLSKIPTLERLVLTYNNLSGHVPQAIFNISSLKYLSMANNSLIGQLPPDIGNRLPNLEALILSTTQLNGPIPASLRNMSKLEMCHLLDPCQTCRTLILDTTSLKQGTGASSHPLQTAPQLKKLALDANFLQGTLPSSVGNLPSQLNWLWLRQNRLSGTIPSEIGNLKSLSVLYLDENMFRRSIPPTIGNLSNLLVLSLAQNNLSGLIPDSIGNLAQLTEFHLDGNNFNGSIPSNLGQWRQLEKLDLSHNSFGGSLPSEVFNISSLSQSLDLSHNLFTGPIPLEIGNLINLGSISISNNRLTGEIPSTLGNCVLLEYLHMEGNLLTGSIPQSFMNLKSIKELDLSRNSLSGKVPEFLTLLSSLQKLNISFNDFEGPIPSNGVFGNASRAILDGNYRLCANDPGYSLPLCRESGSQNGFSPTNLVGLGSFGAVYKGMLPFETNPVAIKVFDLNKYGAPTSFNAECEALRYIRHRNLVKIITLCSTIDPNGYDFKALVFQYMPNGSLEMWLHPEDHGHGKKRFLTLGERISLALDIAYALDYLHNQCVSPLIHCDIKPSNVLLDLEMTAYVSDFGLARFMGANSTAAPGNSTSLADLKGSIGYIAPEYGMGGQISTKGDVYSYGVVLLEILTGKRPTDEKFNDGLSLHDRVDAAFPHRVTEILDPNMLHNDLDGGNSELMQSCVLPLVKVALMCSMASPKDRLGMAQVSTEINSIKQAFVDLSSGGKIV |
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| Function | Receptor kinase-like protein Xa21 [UniProtKB/Swiss-Prot:Q1MX30] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0008720 | OsLima_02g0008720.01 | Chr02 | 6443695 | 6447305 | - | NAM | ||
| CDS seq | atgatacgcttgtttgcttccttcccaaaactcattcctctcttggctgtcttcatcttctcaagttccctgccattagcaatcagtgatgacacagacactgatagagaagccctgctctgcttcaagtcccaaatctctgatcctaatggagctttaagctcttggaccaatacatccctgaacttctgcagctggcagggtgtttcatgcaacaacacccagacccaaccccgagtcatggcgctcaacgtcagctccaaaggcctcagtggttcaataccaccttgcattgccaatctgagctccatcgcaagccttgacttatcaagaaacgcgttccttggaaaaattccaagtgagctcggacgcttgagacaaatcagctacctgaacttgagcatcaactcccttgaaggccgtattccagatgagctgtcctcatgcagcaatctcaaggtactcggcttatcgaacaactccctccaaggtgagataccacaaagcttaacccaatgcactcacctccagcaagctatactatacaacaacaagcttgaaggcagtatacccactggatttgggacgcttcctgagctgaaaactttggatctctctagcaacgccctcagaggtgacataccaccattgttgggcagtagcccatcttttgtatatgttaatcttgggggcaatcagctcacaggaggaatcccagagttcttggcaaatagctcatcccttcaagtgcttaggctcacgcaaaatagtcttacaggggagatccctccagccctcttcaacagctccacattgacaaccatttacctggacccaaataacttggtggggagcatccctgagagcctaagtaagatcccaaccctagagaggctagttctcacatacaacaatttgtctggtcatgtgccacaggctattttcaacatatcatctttgaaatatcttagcatggccaataactcactcatcggccaactaccaccagatataggcaacagacttccaaaccttgaagcattaatcctatcaacaacacagttaaatgggccgatcccagcttctcttcgtaatatgtccaagctagaaatgtgccatcttttggatccttgccaaacttgcaggaccttgatcttggatacaaccagcttgaagcaggggactggagcttcctctcatcccttgcaaactgcacctcaactgaaaaagttggccttggatgcaaattttctccaaggaaccttgcctagctcagtcggtaatcttccctcacagctcaactggttgtggctcaggcaaaacagactttctgggacaattccatcagagattggtaatcttaagagtctcagtgttctgtatttggatgagaatatgtttagaaggagcatcccacctaccattggaaatcttagcaacttactggttctaagcttggcacaaaataacctctcaggccttattcctgattctattggcaaccttgcccaactaaccgagtttcatctagatgggaacaacttcaatgggagcataccttcaaacttagggcagtggagacaattagagaagcttgatttgtcccacaattcattcggtggaagcctgccaagtgaggtcttcaacatttcttccctgtcacaaagtttggacttgtcccacaatttgtttactgggcccataccactagaaattggcaacctcataaatcttggaagcatcagtatttcaaacaatcgcttgaccggggaaataccgtccactctagggaattgtgtgcttttggaataccttcacatggaagggaaccttcttactggaagcattccacaatctttcatgaacttaaaaagcatcaaggagctggatctctctcgtaacagcttgtcaggaaaagttccagagttcctcactctcttaagttctttgcagaaactcaacatttcattcaatgactttgaagggccaataccatcaaatggtgtctttggtaatgctagcagggctatcttggatggaaactacagattgtgtgcgaatgatccagggtatagcctgcccctttgccgtgaatcaggatcacaaaatgggttctctcccacaaatttggttggtttgggatcctttggggctgtttacaagggcatgttgccgtttgagaccaatccagttgctattaaggttttcgatcttaacaagtacggagcacccacaagcttcaatgcggagtgcgaggcattaagatatattcgccatcgaaatcttgtcaaaatcattactttatgctctacgattgatccaaatggctatgattttaaagcacttgtctttcagtatatgccaaatggaagtctggaaatgtggctacatccagaggaccatggacatggtaaaaagagattcctaactttgggtgaaaggattagcttagccttggacattgcatacgctttagattatcttcacaaccagtgtgtatccccactaatacattgtgacatcaaaccaagcaatgttcttttggatcttgaaatgactgcatatgtcagtgactttgggttggcaagatttatgggtgctaattcaacagcagcgcctggtaactctacaagtttggctgacttaaaaggatccattggatatattgcaccagagtacggaatgggtgggcaaatatcaacgaagggtgatgtctacagctatggagtggtgttgttagagatattaactggaaagcgtccaactgatgaaaaattcaatgatggtttgagcctccacgatcgtgtggatgctgcatttccccacagagtaactgagattttagaccccaacatgctacacaacgatttggatggtggaaactccgaactgatgcaaagttgcgtcctcccactggttaaggtggcactcatgtgctccatggcatcaccgaaggacaggttagggatggcgcaggtttccactgaaataaactccatcaagcaagcatttgttgatctttccagtggaggaaaaatagtttga
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| Protein seq | MIRLFASFPKLIPLLAVFIFSSSLPLAISDDTDTDREALLCFKSQISDPNGALSSWTNTSLNFCSWQGVSCNNTQTQPRVMALNVSSKGLSGSIPPCIANLSSIASLDLSRNAFLGKIPSELGRLRQISYLNLSINSLEGRIPDELSSCSNLKVLGLSNNSLQGEIPQSLTQCTHLQQAILYNNKLEGSIPTGFGTLPELKTLDLSSNALRGDIPPLLGSSPSFVYVNLGGNQLTGGIPEFLANSSSLQVLRLTQNSLTGEIPPALFNSSTLTTIYLDPNNLVGSIPESLSKIPTLERLVLTYNNLSGHVPQAIFNISSLKYLSMANNSLIGQLPPDIGNRLPNLEALILSTTQLNGPIPASLRNMSKLEMCHLLDPCQTCRTLILDTTSLKQGTGASSHPLQTAPQLKKLALDANFLQGTLPSSVGNLPSQLNWLWLRQNRLSGTIPSEIGNLKSLSVLYLDENMFRRSIPPTIGNLSNLLVLSLAQNNLSGLIPDSIGNLAQLTEFHLDGNNFNGSIPSNLGQWRQLEKLDLSHNSFGGSLPSEVFNISSLSQSLDLSHNLFTGPIPLEIGNLINLGSISISNNRLTGEIPSTLGNCVLLEYLHMEGNLLTGSIPQSFMNLKSIKELDLSRNSLSGKVPEFLTLLSSLQKLNISFNDFEGPIPSNGVFGNASRAILDGNYRLCANDPGYSLPLCRESGSQNGFSPTNLVGLGSFGAVYKGMLPFETNPVAIKVFDLNKYGAPTSFNAECEALRYIRHRNLVKIITLCSTIDPNGYDFKALVFQYMPNGSLEMWLHPEDHGHGKKRFLTLGERISLALDIAYALDYLHNQCVSPLIHCDIKPSNVLLDLEMTAYVSDFGLARFMGANSTAAPGNSTSLADLKGSIGYIAPEYGMGGQISTKGDVYSYGVVLLEILTGKRPTDEKFNDGLSLHDRVDAAFPHRVTEILDPNMLHNDLDGGNSELMQSCVLPLVKVALMCSMASPKDRLGMAQVSTEINSIKQAFVDLSSGGKIV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0211800 | SBH | 0.720620 | 0.353773 | 0.376538 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g11980 | SBH | 0.320664 | 0.151881 | 0.055591 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0211800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0008460 | SBH | 0.083911 | 2.318136 | 0.117837 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0008570 | SBH | 0.094195 | 0.633336 | 0.140919 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0008360 | SBH | 0.247614 | 1.312991 | 1.301980 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0000660 | SBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0008390 | SBH | 0.000000 | 0.000000 | 1.090552 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0007000 | SBH | 0.0946105 | 0.2399255 | 0.2444645 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0008280 | SBH | 0.000000 | 0.082765 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0107400 | SBH | 0.435921 | 6.0399335 | 2.2805995 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0008340 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0008630 | SBH | 0.762375 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0008620 | SBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0008370 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G008510 | SBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0008780 | SBH | 0.0 | 0.0 | 0.650414 |
