Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_02g0008370 | OGI:02018240 | 3/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr02:6162454-6163091 | ||||||||
| Gene Symbol | RLCK65, OsRLCK65 | ||||||||||
| DNA seq | tcaaactatttttcctccactggaaagatcaacaaatgcttgcttgatggagtttatttcagtggaaacctgcgccatccctaacctgtccttcggtgatgccatggagcacatgagtgccaccttaaccagtgggaggacgcaactttgcatcagttcggagtttccaccatccaaatcgttgtgtagcatgttggggtctaaaatctcagttactctgtggggaaatgcagcatccacacgatcgtggaggctcaaatcatcattgaatttttcatcagttggacgctttccagttaatatctctaacaacaacactccatagctgtagacatcacccttcgttgatatttgcccacccattccatactctgcattttcatttgaaaacataagaatagacgagctactgcccaacaatggtggtatgccacctctgagggcgttgttagagagatccaaagttttcagctcaggaagcgtcccaaatccagtgggtatactgccttcaagcttgttgttgtatagtataacttgctggaggtgagtgcattgggttaagctttgtggtatctcaccttggagggagttgttcgataagccgagtaccttgagattgctgcatgaggacagctcat
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| CDS seq | atgagctgtcctcatgcagcaatctcaaggtactcggcttatcgaacaactccctccaagcaagttatactatacaacaacaagcttgaaggcagtatacccactggatttgggacgcttcctgagctgaaaactttggatctctctaacaacgccctcagaggtggcataccaccattgttgggcagtagctcgtctattcttatgttttcaaatgaaaatgcagagtatggaatgggtgggcaaatatcaacgaagggtgatgtctacagctatggagtgttgttgttagagatattaactggaaagcgtccaactgatgaaaaattcaatgatgatttgagcctccacgatcgtgtggatgctgcatttccccacagagtaactgagattttagaccccaacatgctacacaacgatttggatggtggaaactccgaactgatgcaaagttgcgtcctcccactggttaaggtggcactcatgtgctccatggcatcaccgaaggacaggttagggatggcgcaggtttccactgaaataaactccatcaagcaagcatttgttgatctttccagtggaggaaaaatagtttga
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| Protein seq | MSCPHAAISRYSAYRTTPSKQVILYNNKLEGSIPTGFGTLPELKTLDLSNNALRGGIPPLLGSSSSILMFSNENAEYGMGGQISTKGDVYSYGVLLLEILTGKRPTDEKFNDDLSLHDRVDAAFPHRVTEILDPNMLHNDLDGGNSELMQSCVLPLVKVALMCSMASPKDRLGMAQVSTEINSIKQAFVDLSSGGKIV |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_02g0008370 | OsLaMu_02g0008370.01 | Chr02 | 6162454 | 6163091 | - | NAM | ||
| CDS seq | atgagctgtcctcatgcagcaatctcaaggtactcggcttatcgaacaactccctccaagcaagttatactatacaacaacaagcttgaaggcagtatacccactggatttgggacgcttcctgagctgaaaactttggatctctctaacaacgccctcagaggtggcataccaccattgttgggcagtagctcgtctattcttatgttttcaaatgaaaatgcagagtatggaatgggtgggcaaatatcaacgaagggtgatgtctacagctatggagtgttgttgttagagatattaactggaaagcgtccaactgatgaaaaattcaatgatgatttgagcctccacgatcgtgtggatgctgcatttccccacagagtaactgagattttagaccccaacatgctacacaacgatttggatggtggaaactccgaactgatgcaaagttgcgtcctcccactggttaaggtggcactcatgtgctccatggcatcaccgaaggacaggttagggatggcgcaggtttccactgaaataaactccatcaagcaagcatttgttgatctttccagtggaggaaaaatagtttga
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| Protein seq | MSCPHAAISRYSAYRTTPSKQVILYNNKLEGSIPTGFGTLPELKTLDLSNNALRGGIPPLLGSSSSILMFSNENAEYGMGGQISTKGDVYSYGVLLLEILTGKRPTDEKFNDDLSLHDRVDAAFPHRVTEILDPNMLHNDLDGGNSELMQSCVLPLVKVALMCSMASPKDRLGMAQVSTEINSIKQAFVDLSSGGKIV |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0211800 | SBH | 0.720620 | 0.353773 | 0.376538 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g11980 | SBH | 0.320664 | 0.151881 | 0.055591 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0211800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0008530 | SBH | 0.000000 | 0.0 | 0.584907 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0008630 | SBH | 0.0 | 0.0 | 0.188894 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0008430 | SBH | 0.369193 | 0.439994 | 0.324075 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0008360 | SBH | 0.0 | 0.011065 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0008340 | SBH | 0.000000 | 7.684546 | 2.421861 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0104700 | SBH | 0.3567105 | 0.91528 | 0.4801655 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0008260 | SBH | 0.049859 | 0.221784 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0108100 | SBH | 0.0867895 | 3.3239225 | 0.321302 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0008750 | SBH | 0.030803 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0008340 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0008580 | SBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0008620 | RBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0008400 | SBH | 0.0 | 0.591079 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G008460 | SBH | 0.044440 | 0.000000 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0008450 | SBH | 0.209915 | 7.908681 | 1.141916 |
