Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_02g0008280 | OGI:02001240 | 16/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr02:6207834-6211086 | ||||||||
| Gene Symbol | RLCK59, OsRLCK59, RLCK65, OsRLCK65, - | ||||||||||
| DNA seq | TCAAACTATTTTTCCTCCACTGGAAAGATCAACAAATGCTTGCTTGATGGAGTTTATTTCAGTGGAAACCTGCGCCATCCCTAACCTGTCCTTCGGTGATGCCATGGAGCACATGAGTGCCACCTTAACCAGTGGGAGGACGCAACTTTGCATCAGTTCGGAGTTTCCACCATCCAAATCGTTGTGTAGCATGTTGGGGTCTAAAATCTCAGTTACTCTGTGGGGAAATGCAGCATCCACACGATCGTGGAGGCTCAAACCATCATTGAATTTTTCATCAGTTGGACGCTTTCCAGTTAATATCTCTAACAACAACACTCCATAGCTGTAGACATCACCCTTCGTTGATATTTGCCCACCCATTCCGTACTCTGCATTTTCATTTGAAAACATAAGAATGGCGAATGGAGGAAAACTACAATCCATGTAACATTGGATAAGTTAATAAGATGGCTGAAGCATACAGGTCAATAAATCAGTATAAGTTTCCAATTACTCTCACCTGGTGCAATATATCCAATGGATCCTTTTAAGTCAGCCAAACTTGTAGAGTTACCAGGCGCTGCTGTTGAATTAGCACCCATAAATCTTGCCAACCCAAAGTCACTGACATATGCAGTCATTTCAAGATCCAAAAGAACATTGCTTGGTTTGATGTCACAATGTATTAGTGGGGATACACACTGGTTGTGAAGATAATCTAAAGCGTATGCAATGTCCAAGGCTAAGCTAATCCTTTCACCCAAAGTTAGGAATCTCTTTTTACCATGTCCATGGTCCTCTGGATGTAGCCACATTTCCAGACTTCCATTTGGCATATACTGAAAGACAAGTGCTTTAAAATATAGCCATTTGGATCAATCGTAGAGCATAAAGTAATGATTTTGACAAGATTTCGATGGCGAATATATCTTAATGCCTCGCACTCCGCATTGAAGCTTGTGGGTGCTCCGTACTTGTTAAGATCGAAAACCTTAATAGCAACTGGATTGGTCTCAAACGGCAACATGCCCTTGTAAACAGCCCCAAAGGATCCCAAACCAACCAAATTTGTGGGAGAGAACCCATCTGTTGCATTGGCAATATCTTCATATGATATCTTCCTCATGTTCACACTGGATTGCTGCAAAGATGGTTTTTGTTTTCTTCTCTTGATGAGAACAGCCATTAAACATAACAATAAAATTACAACAGACACTGCGATTGGAATTACTATTTTCAAAATAGTAGACTTGTGTTTACTTTGTGATCCTGATTCACGGCAAAGGGGCAGGCTATACCCTGGATCATTCGCACACAATCTGTAGTTTCCATCCAAGATAGCCCTGCTAGCATTACCAAAGACACCATTTGATGGTATTGGCCCTTCAAAGTCATTGAATGAAAGGTTGAGTTTCTGCAAAGAACTTAAGAGAGTGAGGAACTCTGGAACTTTTCCTGACAAGCTGTTACGAGAGAGATCCAGCTCCTTGATGCTTTTTAAGTTCATGAAAGATTGTGGAATGCTTCCAGTAAGAAGGTTCCCTTCCATGTGAAGGTATTCCAAAAGCACACAATTCCCTAGAGTGGACGGTATTTCCCCGGTCAAGCGATTGTTTGAAATACTGATGCTTCCAAGATTTATGAGGTTGCCAATTTCTAGTGGTATGGGCCCAGTAAACAAATTGTGGGACAAGTCCAAACTTTGTGACAGGGAAGAAATGTTGAAGACCTCACTTGGCAGGCTTCCACCGAATGAATTGTGGGACAAATCAAGCTTCTCTAATTGTCTCCACTGCCCTAAGTTTGAAGGTATGCTCCCATTGAAGTTGTTCCCATCTAGATGAAACTCGGTTAGTTGGGCAAGGTTGCCAATAGAATCAGGAATAAGGCCTGAGAGGTTGTTTTGTGCCAAGCTTAGAACCAGTAAGTTGCTAAGATTTCCAATGGTAGGTGGGATGCTCCCACTAAACATATTCTCATCCAAATACAGAACACTGAGACTCTTAAGATTACCAATCTCTGATGGAATTGTCCCAGAAAGTCTGTTTTGCCTGAGCCACAACCAGTTGAGCTGTGAGGGAAGATTACCGACTGAGCTAGGCAAGGTTCCTTGGAGAAAATTTGCATCCAAGGCCAACTTTTTCAGTTGAGTGCAGTTTGCAAGGGATGAGAGGAAGCTCCAGTCCCCTGCTTCAAGCTGGTTGTATCCAAGATCAAGGTCCTGCAAGTTTGGCAAGGATCCAAAAGATGGCACTATACCAGTGAGACCAGCAGCAGCAAGATAAACCATTTCTAGCTTGGACATATTGCGAAGAGAAGCTGGGATCGGCCCATTTAACTGTGTTGTTGAAAGGATTAAGGCTTCAAGGTTTGGAAGTCTGTTGCCTATATCTGGTGGTAGTTGGCCGATGAGTGAGTTATTGGCCATGCTAAGATATTTCAAAGATGATATGTTGAAAATAGCCTGTGGCACATGACCAGACAAATTGTTGTATGTGAGAACTAGCCTCTCTAGGGTTGGGATCTTACTTAGGCTCTCAGGGATGCTCCCCACCAAGTTATTTGCTTTTAAAGAAACATGAACCAAGGAAGAAAGGTTGCCCAGTGAGGCTGGTATCCCTCCTGTGAGTTTATTCTGCTCTAAAGTAAGGTATTGAATAGGTGCAGCAATTGCTGTAATAGGTGGTATGGAACCAACTAATTTGTTACGGTCCAGGTAAATGGTTGTCAACGTGGAGCTGTTGAAGAGGGCTGGAGGGATCTCCCCTGTAAGACTATTTTGCGTGAGCCTAAGCACTTGAAGGGATGAGCTATTTGCCAAGAACTCTGGGATTCCTCCTGTGAGCTGATTGCCCCCAAGATCAACATATACAAAAGACGAGCTACTGCCCAACAATGGTGGTATGCCACCTCTGAGGGCGTTGTTAGAGAGATCCAAAGTTTTCAGCTCAGGAAGCGTCCCAAATCCAGTGGGTATACTGCCTTCAAGCTTGTTGTTGTATAGTATAACTTGCTGGAGGTGAGTGCATTGGGTTAAGCTTTGTGGTATCTCACCTTGGAGGGAGTTGTTCGATAAGCCGAGTACCTTGAGATTGCTGCATGAGGACAGCTCATCTGGAATACGGCCTTCAAGAGAGTTGATGCTCAAGTTCAGGTAGCTGATTTGTCTCAAGCGTCTGAGCTCACTTGGAATTTTTCCAAGGAACGCGTTTCTTGATAAGTCGAGGCTTGCGATGGAGCTCAGATTGCCGATGCAAGGTGGTATTGAACC
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| CDS seq | ATGGCCAATAACTCACTCATCGGCCAACTACCACCAGATATAGGCAACAGACTTCCAAACCTTGAAGCCTTAATCCTTTCAACAACACAGTTAAATGGGCCGATCCCAGCTTCTCTTCGCAATATGTCCAAGCTAGAAATGGTTTATCTTGCTGCTGCTGGTCTCACTGGTATAGTGCCATCTTTTGGATCCTTGCCAAACTTGCAGGACCTTGATCTTGGATACAACCAGCTTGAAGCAGGGGACTGGAGCTTCCTCTCATCCCTTGCAAACTGCACTCAACTGAAAAAGTTGGCCTTGGATGCAAATTTTCTCCAAGGAACCTTGCCTAGCTCAGTCGGTAATCTTCCCTCACAGCTCAACTGGTTGTGGCTCAGGCAAAACAGACTTTCTGGGACAATTCCATCAGAGATTGGTAATCTTAAGAGTCTCAGTGTTCTGTATTTGGATGAGAATATGTTTAGTGGGAGCATCCCACCTACCATTGGAAATCTTAGCAACTTACTGGTTCTAAGCTTGGCACAAAACAACCTCTCAGGCCTTATTCCTGATTCTATTGGCAACCTTGCCCAACTAACCGAGTTTCATCTAGATGGGAACAACTTCAATGGGAGCATACCTTCAAACTTAGGGCAGTGGAGACAATTAGAGAAGCTTGATTTGTCCCACAATTCATTCGGTGGAAGCCTGCCAAGTGAGGTCTTCAACATTTCTTCCCTGTCACAAAGTTTGGACTTGTCCCACAATTTGTTTACTGGGCCCATACCACTAGAAATTGGCAACCTCATAAATCTTGGAAGCATCAGTATTTCAAACAATCGCTTGACCGGGGAAATACCGTCCACTCTAGGGAATTGTGTGCTTTTGGAATACCTTCACATGGAAGGGAACCTTCTTACTGGAAGCATTCCACAATCTTTCATGAACTTAAAAAGCATCAAGGAGCTGGATCTCTCTCGTAACAGCTTGTCAGGAAAAGTTCCAGAGTTCCTCACTCTCTTAAGTTCTTTGCAGAAACTCAACCTTTCATTCAATGACTTTGAAGGGCCAATACCATCAAATGGTGTCTTTGGTAATGCTAGCAGGGCTATCTTGGATGGAAACTACAGATTGTGTGCGAATGATCCAGGAAGAAAACAAAAACCATCTTTGCAGCAATCCAGTGTGAACATGAGGAAGATATCATATGAAGATATTGCCAATGCAACAGATGGGTTCTCTCCCACAAATTTGGTTGGTTTGGGATCCTTTGGGGCTGTTTACAAGGGCATGTTGCCGTTTGAGACCAATCCAGTTGCTATTAAGGTTTTCGATCTTAACAAGTACGGAGCACCCACAAGCTTCAATGCGGAGTGCGAGGCATTAAGATATATTCGCCATCGAAATCTTGTCAAAATCATTACTTTATGCTCTACGATTGATCCAAATGGCTATATTTTAAAGCACTTGTCTTTCAGTATATGCCAAATGGAAGTCTGGAAATGTGGCTACATCCAGAGGACCATGGACATGTGTGTATCCCCACTAATACATTGTGACATCAAACCAAGCAATGTTCTTTTGGATCTTGAAATGACTGCATATGTCAGTGACTTTGGGTTGGCAAGATTTATGGGTGCTAATTCAACAGCAGCGCCTGGTAACTCTACAAGTTTGGCTGACTTAAAAGGATCCATTGGATATATTGCACCAGAGTACGGAATGGGTGGGCAAATATCAACGAAGGGTGATGTCTACAGCTATGGAGTGTTGTTGTTAGAGATATTAACTGGAAAGCGTCCAACTGATGAAAAATTCAATGATGGTTTGAGCCTCCACGATCGTGTGGATGCTGCATTTCCCCACAGAGTAACTGAGATTTTAGACCCCAACATGCTACACAACGATTTGGATGGTGGAAACTCCGAACTGATGCAAAGTTGCGTCCTCCCACTGGTTAAGGTGGCACTCATGTGCTCCATGGCATCACCGAAGGACAGGTTAGGGATGGCGCAGGTTTCCACTGAAATAAACTCCATCAAGCAAGCATTTGTTGATCTTTCCAGTGGAGGAAAAATAGTTTGA
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| Protein seq | MANNSLIGQLPPDIGNRLPNLEALILSTTQLNGPIPASLRNMSKLEMVYLAAAGLTGIVPSFGSLPNLQDLDLGYNQLEAGDWSFLSSLANCTQLKKLALDANFLQGTLPSSVGNLPSQLNWLWLRQNRLSGTIPSEIGNLKSLSVLYLDENMFSGSIPPTIGNLSNLLVLSLAQNNLSGLIPDSIGNLAQLTEFHLDGNNFNGSIPSNLGQWRQLEKLDLSHNSFGGSLPSEVFNISSLSQSLDLSHNLFTGPIPLEIGNLINLGSISISNNRLTGEIPSTLGNCVLLEYLHMEGNLLTGSIPQSFMNLKSIKELDLSRNSLSGKVPEFLTLLSSLQKLNLSFNDFEGPIPSNGVFGNASRAILDGNYRLCANDPGRKQKPSLQQSSVNMRKISYEDIANATDGFSPTNLVGLGSFGAVYKGMLPFETNPVAIKVFDLNKYGAPTSFNAECEALRYIRHRNLVKIITLCSTIDPNGYILKHLSFSICQMEVWKCGYIQRTMDMCVSPLIHCDIKPSNVLLDLEMTAYVSDFGLARFMGANSTAAPGNSTSLADLKGSIGYIAPEYGMGGQISTKGDVYSYGVLLLEILTGKRPTDEKFNDGLSLHDRVDAAFPHRVTEILDPNMLHNDLDGGNSELMQSCVLPLVKVALMCSMASPKDRLGMAQVSTEINSIKQAFVDLSSGGKIV |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_02g0008280 | OsIR64_02g0008280.01 | Chr02 | 6207834 | 6211086 | - | NAM | ||
| CDS seq | ATGGCCAATAACTCACTCATCGGCCAACTACCACCAGATATAGGCAACAGACTTCCAAACCTTGAAGCCTTAATCCTTTCAACAACACAGTTAAATGGGCCGATCCCAGCTTCTCTTCGCAATATGTCCAAGCTAGAAATGGTTTATCTTGCTGCTGCTGGTCTCACTGGTATAGTGCCATCTTTTGGATCCTTGCCAAACTTGCAGGACCTTGATCTTGGATACAACCAGCTTGAAGCAGGGGACTGGAGCTTCCTCTCATCCCTTGCAAACTGCACTCAACTGAAAAAGTTGGCCTTGGATGCAAATTTTCTCCAAGGAACCTTGCCTAGCTCAGTCGGTAATCTTCCCTCACAGCTCAACTGGTTGTGGCTCAGGCAAAACAGACTTTCTGGGACAATTCCATCAGAGATTGGTAATCTTAAGAGTCTCAGTGTTCTGTATTTGGATGAGAATATGTTTAGTGGGAGCATCCCACCTACCATTGGAAATCTTAGCAACTTACTGGTTCTAAGCTTGGCACAAAACAACCTCTCAGGCCTTATTCCTGATTCTATTGGCAACCTTGCCCAACTAACCGAGTTTCATCTAGATGGGAACAACTTCAATGGGAGCATACCTTCAAACTTAGGGCAGTGGAGACAATTAGAGAAGCTTGATTTGTCCCACAATTCATTCGGTGGAAGCCTGCCAAGTGAGGTCTTCAACATTTCTTCCCTGTCACAAAGTTTGGACTTGTCCCACAATTTGTTTACTGGGCCCATACCACTAGAAATTGGCAACCTCATAAATCTTGGAAGCATCAGTATTTCAAACAATCGCTTGACCGGGGAAATACCGTCCACTCTAGGGAATTGTGTGCTTTTGGAATACCTTCACATGGAAGGGAACCTTCTTACTGGAAGCATTCCACAATCTTTCATGAACTTAAAAAGCATCAAGGAGCTGGATCTCTCTCGTAACAGCTTGTCAGGAAAAGTTCCAGAGTTCCTCACTCTCTTAAGTTCTTTGCAGAAACTCAACCTTTCATTCAATGACTTTGAAGGGCCAATACCATCAAATGGTGTCTTTGGTAATGCTAGCAGGGCTATCTTGGATGGAAACTACAGATTGTGTGCGAATGATCCAGGAAGAAAACAAAAACCATCTTTGCAGCAATCCAGTGTGAACATGAGGAAGATATCATATGAAGATATTGCCAATGCAACAGATGGGTTCTCTCCCACAAATTTGGTTGGTTTGGGATCCTTTGGGGCTGTTTACAAGGGCATGTTGCCGTTTGAGACCAATCCAGTTGCTATTAAGGTTTTCGATCTTAACAAGTACGGAGCACCCACAAGCTTCAATGCGGAGTGCGAGGCATTAAGATATATTCGCCATCGAAATCTTGTCAAAATCATTACTTTATGCTCTACGATTGATCCAAATGGCTATATTTTAAAGCACTTGTCTTTCAGTATATGCCAAATGGAAGTCTGGAAATGTGGCTACATCCAGAGGACCATGGACATGTGTGTATCCCCACTAATACATTGTGACATCAAACCAAGCAATGTTCTTTTGGATCTTGAAATGACTGCATATGTCAGTGACTTTGGGTTGGCAAGATTTATGGGTGCTAATTCAACAGCAGCGCCTGGTAACTCTACAAGTTTGGCTGACTTAAAAGGATCCATTGGATATATTGCACCAGAGTACGGAATGGGTGGGCAAATATCAACGAAGGGTGATGTCTACAGCTATGGAGTGTTGTTGTTAGAGATATTAACTGGAAAGCGTCCAACTGATGAAAAATTCAATGATGGTTTGAGCCTCCACGATCGTGTGGATGCTGCATTTCCCCACAGAGTAACTGAGATTTTAGACCCCAACATGCTACACAACGATTTGGATGGTGGAAACTCCGAACTGATGCAAAGTTGCGTCCTCCCACTGGTTAAGGTGGCACTCATGTGCTCCATGGCATCACCGAAGGACAGGTTAGGGATGGCGCAGGTTTCCACTGAAATAAACTCCATCAAGCAAGCATTTGTTGATCTTTCCAGTGGAGGAAAAATAGTTTGA
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| Protein seq | MANNSLIGQLPPDIGNRLPNLEALILSTTQLNGPIPASLRNMSKLEMVYLAAAGLTGIVPSFGSLPNLQDLDLGYNQLEAGDWSFLSSLANCTQLKKLALDANFLQGTLPSSVGNLPSQLNWLWLRQNRLSGTIPSEIGNLKSLSVLYLDENMFSGSIPPTIGNLSNLLVLSLAQNNLSGLIPDSIGNLAQLTEFHLDGNNFNGSIPSNLGQWRQLEKLDLSHNSFGGSLPSEVFNISSLSQSLDLSHNLFTGPIPLEIGNLINLGSISISNNRLTGEIPSTLGNCVLLEYLHMEGNLLTGSIPQSFMNLKSIKELDLSRNSLSGKVPEFLTLLSSLQKLNLSFNDFEGPIPSNGVFGNASRAILDGNYRLCANDPGRKQKPSLQQSSVNMRKISYEDIANATDGFSPTNLVGLGSFGAVYKGMLPFETNPVAIKVFDLNKYGAPTSFNAECEALRYIRHRNLVKIITLCSTIDPNGYILKHLSFSICQMEVWKCGYIQRTMDMCVSPLIHCDIKPSNVLLDLEMTAYVSDFGLARFMGANSTAAPGNSTSLADLKGSIGYIAPEYGMGGQISTKGDVYSYGVLLLEILTGKRPTDEKFNDGLSLHDRVDAAFPHRVTEILDPNMLHNDLDGGNSELMQSCVLPLVKVALMCSMASPKDRLGMAQVSTEINSIKQAFVDLSSGGKIV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.082765 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0211800 | SBH | 0.720620 | 0.353773 | 0.376538 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g11980 | RBH | 0.320664 | 0.151881 | 0.055591 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0211800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0008530 | SBH | 0.000000 | 0.0 | 0.584907 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0008630 | SBH | 0.0 | 0.0 | 0.188894 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0008430 | SBH | 0.369193 | 0.439994 | 0.324075 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0008360 | RBH | 0.0 | 0.011065 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0008340 | SBH | 0.000000 | 7.684546 | 2.421861 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0104200 | SBH | 0.5143795 | 1.7940075 | 0.4215545 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0004810 | SBH | 0.297846 | 0.021683 | 0.170285 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0107400 | SBH | 0.435921 | 6.0399335 | 2.2805995 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0008750 | RBH | 0.030803 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0008320 | SBH | 0.107421 | 2.633415 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0008580 | SBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0008600 | SBH | 0.191014 | 0.322503 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0008350 | SBH | 0.0 | 1.303229 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G008460 | SBH | 0.044440 | 0.000000 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0008450 | SBH | 0.209915 | 7.908681 | 1.141916 |
