Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_02G0007000 | OGI:02001240 | 16/16 | Minghui 63 | MH63RS3 | HZAU | Chr02:379831-380634 | ||||||||
| Gene Symbol | RLCK59, OsRLCK59, RLCK65, OsRLCK65, - | ||||||||||
| DNA seq | CAAGAGAAAGCCACAGCATGAACAGCAAGATGATCCGCTTGTTTGCTCCATTCCCAAAATTCATTCCACTCTTGGCTGTTTTTATCATCTCATGCTCTCTGCCATTAGCAATCAGCGATGACACTGACACTGATAGAGAAGCCCTGCTCTGCTTCAAGTCTCAAATCTCTGATCCAAACGGATCCTTAAGCTCATGGAGCAACACTTCCCAGAACTTCTGCAACTGGCAGGGTGTTTCATGCAACAACACCCAGACCCAACTCCGAGTCATGGTGCTCAACGTCAGCTCCAAAGGCCTCAGTGGTTCAATACCACCTTGCATCGGCAATCTGAGCTCCATCGCAAGCCTCGACTTATCAAGAAACGCATTCCTTGGAAAAATTCCAAGTGAGCTCGGACGCTTGGGACAAATCAGCTACCTGAACTTGAGCATCAACTCTCTTGAAGGCCGTATTCCAGATGAGCTGTCCTCATTGTGGAGATTATGGATATCTCATATCTGCACGGCGATGGTATTTGGGCTGCTTATAGGATACTGCATACAGATAAAATATTTTATCTATATCGGGAGTTTGTTTCTCAACTTGTACATCAAGGAATTACCTTGAGACTTAGTCGGTTACGACTGTATTTTATCTGTATCTGCATATTCCGTTAGGGATATAGATTATCTTTTGTAACACGGACTCCTTCCCATATATAAGGGGGGGTCCGGGTGCCTCTAGGGGCATATGTTGATTTTCTCCAAATCATACAATCAATAATACACACGGCGGATTCATCCCCGGACAGGAGTAGGGTATT
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| CDS seq | ATGAACAGCAAGATGATCCGCTTGTTTGCTCCATTCCCAAAATTCATTCCACTCTTGGCTGTTTTTATCATCTCATGCTCTCTGCCATTAGCAATCAGCGATGACACTGACACTGATAGAGAAGCCCTGCTCTGCTTCAAGTCTCAAATCTCTGATCCAAACGGATCCTTAAGCTCATGGAGCAACACTTCCCAGAACTTCTGCAACTGGCAGGGTGTTTCATGCAACAACACCCAGACCCAACTCCGAGTCATGGTGCTCAACGTCAGCTCCAAAGGCCTCAGTGGTTCAATACCACCTTGCATCGGCAATCTGAGCTCCATCGCAAGCCTCGACTTATCAAGAAACGCATTCCTTGGAAAAATTCCAAGTGAGCTCGGACGCTTGGGACAAATCAGCTACCTGAACTTGAGCATCAACTCTCTTGAAGGCCGTATTCCAGATGAGCTGTCCTCATTGTGGAGATTATGGATATCTCATATCTGCACGGCGATGGTATTTGGGCTGCTTATAGGATACTGCATACAGATAAAATATTTTATCTATATCGGGAGTTTGTTTCTCAACTTGTACATCAAGGAATTACCTTGA
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| Protein seq | MNSKMIRLFAPFPKFIPLLAVFIISCSLPLAISDDTDTDREALLCFKSQISDPNGSLSSWSNTSQNFCNWQGVSCNNTQTQLRVMVLNVSSKGLSGSIPPCIGNLSSIASLDLSRNAFLGKIPSELGRLGQISYLNLSINSLEGRIPDELSSLWRLWISHICTAMVFGLLIGYCIQIKYFIYIGSLFLNLYIKELP |
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| Function | LRR receptor-like serine/threonine-protein kinase EFR [UniProtKB/Swiss-Prot:C0LGT6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_02G0007000 | OsMH63_02T0007000.1 | Chr02 | 379831 | 380634 | + | maker | ||
| CDS seq | ATGAACAGCAAGATGATCCGCTTGTTTGCTCCATTCCCAAAATTCATTCCACTCTTGGCTGTTTTTATCATCTCATGCTCTCTGCCATTAGCAATCAGCGATGACACTGACACTGATAGAGAAGCCCTGCTCTGCTTCAAGTCTCAAATCTCTGATCCAAACGGATCCTTAAGCTCATGGAGCAACACTTCCCAGAACTTCTGCAACTGGCAGGGTGTTTCATGCAACAACACCCAGACCCAACTCCGAGTCATGGTGCTCAACGTCAGCTCCAAAGGCCTCAGTGGTTCAATACCACCTTGCATCGGCAATCTGAGCTCCATCGCAAGCCTCGACTTATCAAGAAACGCATTCCTTGGAAAAATTCCAAGTGAGCTCGGACGCTTGGGACAAATCAGCTACCTGAACTTGAGCATCAACTCTCTTGAAGGCCGTATTCCAGATGAGCTGTCCTCATTGTGGAGATTATGGATATCTCATATCTGCACGGCGATGGTATTTGGGCTGCTTATAGGATACTGCATACAGATAAAATATTTTATCTATATCGGGAGTTTGTTTCTCAACTTGTACATCAAGGAATTACCTTGA
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| Protein seq | MNSKMIRLFAPFPKFIPLLAVFIISCSLPLAISDDTDTDREALLCFKSQISDPNGSLSSWSNTSQNFCNWQGVSCNNTQTQLRVMVLNVSSKGLSGSIPPCIGNLSSIASLDLSRNAFLGKIPSELGRLGQISYLNLSINSLEGRIPDELSSLWRLWISHICTAMVFGLLIGYCIQIKYFIYIGSLFLNLYIKELP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0946105 | 0.2399255 | 0.2444645 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0211200 | RBH | 0.143178 | 1.308513 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g01800 | RBH | 0.139563 | 0.0 | 0.129845 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0211200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0000650 | SBH | 0.000000 | 0.000000 | 0.798324 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0000690 | RBH | 0.0 | 0.606034 | 0.471768 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0000660 | SBH | 0.168008 | 0.000000 | 0.901056 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0000660 | RBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0000650 | RBH | 0.0 | 0.972973 | 1.285330 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0007400 | RBH | 0.417008 | 1.525469 | 0.7026865 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0000650 | RBH | 0.000000 | 0.155885 | 0.052090 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0007400 | RBH | 0.3707675 | 1.4773145 | 4.691201 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0008750 | RBH | 0.030803 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0008320 | SBH | 0.107421 | 2.633415 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0008580 | SBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0008600 | SBH | 0.191014 | 0.322503 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0000650 | RBH | 0.0 | 0.390719 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G008460 | SBH | 0.044440 | 0.000000 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0000650 | RBH | 0.0 | 0.000000 | 1.080809 |
