Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_11g0004760 | OGI:11011440 | 2/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr11:3534567-3542806 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | agtctgtcagagctttgctactagatgacttcaaaatcaggctgccgatctgtaagcatttccttgtttagttcattcctttccattgctcagaattgagatatcttttcattaaagaagataagtattgaaaactataaacttataaagatggcactaagccaagaatccagtttagaattggttccctgacagtggcttgtcactctagtatatatttgatcagaaaccgcttgtgttttggaattgattagaccaggaaaatagctgctaattctatgcgttgtctgataaatgatccatctgtgctaaaactgtagggatcagaagcgaacttgaagtgaactgagtggcagctacatcagtccagattcaagacagagttccattgcttctgtctggccacatgatccagatctacatttgaacatagctagtcaataatgatggttattacaactggaaagattatcttgattttcttagcttgcactgcacatgtcgtcacctgcagttccttatatggaaacgagacagatcgagtggcactgcttgaattcaagcaggcagtccgtcttgatccaaaacaagccttgatgtcctggaatgacagcatccacttttgcaattgggaaggcatcttgtgcagcttgaggattccatatcgtgtcacttctcttaatcttacaaatcgaggtttagtagggcaaatctctccttcacttggaaacctcacatttctatcaattctatcccttacagagaattcattcagtggacaaatccctgcatcccttggccacttgaaccacctccaaactctctggttgagtaacaacactctgcaaggagttataccagattttacaaattgttccagtatgaaggctctacggctgaatggcaataatctagttggaaaatttccgcagctgcctcatcgccttcaaagtctgcaactttcatacaatcatcttagtggaaccattcctgcttctcttgctaatatcacaaggctaaatgtgcttacctgcacatataataacatccagggcgatatcccacatgagatcggaaagttatccagcctgcaattcttgtatgtaggtgcaaataagttggttggcaggtttccacaagccatcttaaacctttctactcttattggtcttagccttgggtttaataatctaactggagaggcatcatccaatcttggtaattgtctacccaaccttcagctacttgaattagaagacaactgctttcaagggcaaatcccctcttcgttgataaatgcttccaagctatatcgtcttgagctagcaagcaataacttcatcggtgtggtgcctagatccattggcaaactaaccaagctatcttggttaaatcttcagtccaataaacttcaagctcgtaacaagcaagattgggagtttcttgacagcttagccaactgcactgagctgaaagctttctcgatagctagtaatcatctagaaggacatgtgccaacttcattaggtaacctttctgttcagcttgtacaattgtttttgagtggaaatcaattatcaggtggttttccttctggcatagcaaaccttccaaacctgatttatattggactggacaacaaccagtttactggtgcagtcccaaaatggcttggaactctcagtaatttacaacagatattgttacatgagaacatgtttactgggtttattccaacatccctttcaaatttatctgtactgggatctctctggctagactataacaaaattggaggacctttaccagcaagcttgggaaacctgcaaacgcttgaaacattgagcatttcaaacaacaaactccatggtagtgtaccaatggagatcttcagaatcccaacaatacggttaattgatttgtctttcaacaactttgatgggcagcttagtgccagggtaggaaatgctaagcaactcatgtatttatatctttcatccaacaatttatctggaggtattcctagttcactgggcaattgtgaaagtttggaaggcatcaaattgggctcgaatattcttagtggaagcattcctacttcattaggcaacataagaagtctgaaagttctcaacttgtctcacaataacttaagtggatcaatacatgctaatcttggaaagttatggctccttgaacaagtagatttgtcatttaacaatctcagcggtgagataccaacagaaggaatattcttgaatgcaactgcagtgcacatcaatggaaatgagggtctttgtggcggggcactcaatttacacctacccacatgttatgtcatgcctttgaattcatctaggagtgaacgatctattttgctgtatttggtgatattatttgctagcctggtgtcagttatattcatatatctattattgctctggaggggaaaacagaagaaaaaatgtacatctttgaccccatttgatagcaaatttcccaaagtttcttacaatgatctcgccaaggcaactgaagcgttttcagcatctaatataattggaagaggaatatacagtcatgtttacaaaggggaattgttccaaggcagagatgtggttgctgttaaagttttcagcctggagacagaaggagcagaacatagttttatcacggaatgcaatgctttgagaaaagtgcggcatcgcaatctagttcctatcttaactgtgtgctcaagtctggatactaagggaaatgatttcagagccctggtgtataagttaattccacaaggagacttgtattctctactgcactcaactagagatagtgagaatggtttcacttcgaacatcattacattttctcaaaggctaagcattgttgtggacatagcagatgcattggaatatcttcaccataacaaccaagaaactgttgttcattgtgacataaagcctagcaatattcttctggacaatgatatgaaagcttatgttggagatttcggtcttgcgaggctcaaagctgatgctgcagtaccatctgtcggtgactcaaactcaacttctatgattgcaataaaaggaaccattggatatgttgctcctggtattatttcctgtttttcaatttaacttgagaattttttgtgcttctaccaacatttggacttagttatccttgattgatgtctacagagtatgcatctggtggtcaagtttcaactgctgcagatgtttatagctttggaattgttctccttgaagtattcttacggaagggaccgacagatgatatgttcaaggatggtctggatattgcaaaattcgttagtatgaactttcctgacaagatactagatattgttgaccctgtattactacaagacgaactggattgctcaaaggaatctccagttgccatgaaggaaatcttttctgagtgtttacattcagtgctaaacattggactttgctgcaccaagcagtccccgtacgagcgcatggacatgcgagaagtggctgcaaagctacatggaacaaggaggcatatctctgaggcaactaggtaatataatgtaagatatgtaccctgcctatagctgtgagatactctgctaccttctcgcatggcatgtttaatattgtcactctctcttatataatgaaatcacaactcttgttattgctgtaataatccgagcactacatttggtttggaatcttacacaattacactgcagatacatggtattgttggaaactctgcactgttatcatattcttttcttttagaggaattgataccaatattcagccctcatgctttttgctgttgatggagataaggactggtcagctttatattcacagaacattgaaaattttcttgttagttccttaatttgtcaacaatggaactttcttctcagctactagctgatttgggtgatgactgccatctgcgttgaattttgtactcagctgttttttttcccctgtgaatggactgggaaattgggtctctcgaacgaaaccttatttggtttgatgttgtgtttcataatcaatttgattatatttaatggatcgaattatatataacacatgtcacatgtggtacttgttctgggttacaacttacaatgctttgagattgctcatggcataaaagaaaaatacaagggcctgtttggaagccagctggtatttgacccgaaactggtactccctccatccctaaatgtttgacgccgttgactttttaaaacatgtttgaccgttcgtcttatttaaaaaatttaagtaattattaattctttttctatcatttgattcattgttaaatatacttttacgtatacatatagttttacatatttcacaaaagtttttgaataagacgaatggtcaaacatgtttaaaaaaatcaacggcgtcaaacatttagggaaggagggagtactaaatacaaggcagaaaattttgactggctggacaaaaatttgtgctgagaaaatcatcaacttgctatgttgctattgccttttgcttgtcgtcgtctcagttagactggtctacatgaaatcatacaataataaaacttggggggacctgacagtataattaaatccagtggcgtcaccattgctgcatcaatcaatagtgtaatctgcctctcatcaagataaaaccatgggcaaaagttaggcacgtcctccacttgcagtcatgattagtatcttctctggagaaaaactggtgtttgttctgtcgattaattcgaaggtctttgccaagacagtgcagacgccacggctctacaaaatgaggcagctgattgctgatggccactagactgcaggctgaaggctactcttctcgctggtaaataaccttcttgaatgaatgtcgattgatcttttaatttaatttgtttatgttcatctattaattgactgctttgggggcttttgtgggatgggtctccatgtatctacaggcttgtttctgttcatgaattttatgcatatttaatacccccccctctcatgttgctttgattttttttaaagtcaaacttcttgaaagtttgatcaagtttatagaaaaatatagctaacatttatagcaccaaattagttttattaaatctaacattgaatatattttgatagtttctttgttttatgttgaaaatattgctatatttttctgcaaatttggtcaaagctaaagtagtttgatttagaaagaaagttaaaatgacttataatatgaaattgagatagtacacatatgattagaaagatactgttagatgataagaaattattgtttctttgttacctagaacttgttttgctagcttctggcttgcatcccctctttcaagtctttgacactagagcccttcttttcaatgactggtgatcatatttcttttctttttgtttttacgaaactgcgggagtcagattcatcattcattaactagtataaaaaatatatgcgtagtaaaaaaaccaaaagaaagaaaaatcataactgtatgtttctgaataagtatatctgctaactgtatgtttctgaagctacttctcaactctgattctgaagtctgaaggacagttgcattcatcaacctatagcagcaagcagctttcatgttgtggaatctttctgatgaaacgaggtaaagaaaaataaaagctttatggtacttcacatttgtccatttaccaacattctctaactttcttaaaacaccttctctattgaaactttaggctcttgaatgttctttcaaaaagaacacttgccagacatgtgttgaccccctttctctttctctgtctgcatatatgacataaccaagacctagcactattcgaccgaagagctggccatgaagatcactgtaattggactgtttcagttgctgcttatggtgtgcagtgcagtccaaatcatttgcagttcgtcgtatggaaacgagacagataagctctcactgcttgagttcaagaaggcaatcactcttgatccccagcaagtcctgatttcttggaatgacagcaatcacttttgcagctgggaaggagtcttgtgcagaaagaagacaaccaatcgtgtcatttctcttaaccttacgaaccaacgtttagtaggactaatctccccttctcttggaaacctaacattcctaaaatttctgtacttagacacaaattcattcaccggagagatccctctgtcccttggccacctgcatcatctccaaaacctctacttgagcaacaacacattacaaggaaaaatacctgattttacaaacagttccaacctcaaggtgctactcctcaatggcaatcacctcattggacaattcaataataatttcccccctcatcttcaagggctggacctttcattcaataatcttactggaaccatcccctcttctcttgccaatatcacggagctattgggtgttggtttcatgtcaaacaatatcaagggaaacatcccaaatgagttctcaaagttcgtctcgattgggtatcttgctgcgagtcaaaacatgttgtcaggaaggtttccacaagccatcttaaatctctctactcttgatgttctttaccttggttttaatcatctaagtggagatttaccatcaaatcttcttgactcgctacccagcatagaaatactttcattgggagggaacttcttccaagggcatatcccctgctctgtggtaaactcttccaacctaggtttactagacatttcatctaataattttactgggcttgtaccaagttccattggaaaacttaccaaactgtatcacctaaatcttcagtccaatcaacttcaagcacacagaaagcaggattgggactttatgaatggcttaaccaactgtactaggctacaaatgatctcgatagctaataaccgtctacaaggccatctaccaagttcattaggtaacctttcctctcaacttggaatgctacatttgggaggaaatcaaatatctggtgttttaccttcggacatagaaaacctctccagccttacttatttccggattgataccaatgaaattacaggtgtccttccagaatggcttggttttcttaaacacctacaagtattaggcttatttaacaacaacttcacggggtttattccaccgtccctttcaaatttgtctcagctggtatatttaattctagattttaatgagttcgatggacacataccacatatcttgaaaaacctccatatgcttttatcattcagtgcttcccacaacaatcttcaaggtagcataccaaatgagatatttacaatcccatcaatagttcaagttgatttatctttcaacaatctagatggacaacttcctgcggcaatgcaaaacaactttcaaagttgtcacttgcatcgaataagctatctggagatattcctaacactttgggtgattttgaaagcttggaatacattgacttatcctggaataatttcactgggatcatccctgcttccataggaaagataacaagtctagaggttctcaaattctcacacaataacttaactgggccaataccatcattgcttggtgacctacattttcttgagcaactggatttgtcattcaaccatcttaaaggtgaggttcggatgaaaggaatattccagaatgtgacagccttgagcattggtggaaatgagggactatgtggtggatcacgagagttacacttactcgcatgccctgtcatatctttggtctcatctaagcacaagaaatcaattttactaaaaatactaatcccagttgcctgcttggtatcacttgctatggtcatatctattttttttacttggagggggaaacggaagagagaatccctatcattaccttcatttggtacaaatttccccaatttttcatataataatctattcaaagcaactgaggggttctcatcatccaatttaatcggcaaaggaagatatagttatgtctatgtaggaaaactatttcaagacaacattgttgctgttaaagtcttcagtctagagacaaggggagcacacaagagcttcatggcagaatgtaatgccttgagaaatgtgcggcattgcaatctacttcctatcctcactgcatgttctagtattgattctgaaggcaatgattttaaagcttaa
More
|
||||||||||
| CDS seq | atgatggttattacaactggaaagattatcttgattttcttagcttgcactgcacatgtcgtcacctgcagttccttatatggaaacgagacagatcgagtggcactgcttgaattcaagcaggcagtccgtcttgatccaaaacaagccttgatgtcctggaatgacagcatccacttttgcaattgggaaggcatcttgtgcagcttgaggattccatatcgtgtcacttctcttaatcttacaaatcgaggtttagtagggcaaatctctccttcacttggaaacctcacatttctatcaattctatcccttacagagaattcattcagtggacaaatccctgcatcccttggccacttgaaccacctccaaactctctggttgagtaacaacactctgcaaggagttataccagattttacaaattgttccagtatgaaggctctacggctgaatggcaataatctagttggaaaatttccgcagctgcctcatcgccttcaaagtctgcaactttcatacaatcatcttagtggaaccattcctgcttctcttgctaatatcacaaggctaaatgtgcttacctgcacatataataacatccagggcgatatcccacatgagatcggaaagttatccagcctgcaattcttgtatgtaggtgcaaataagttggttggcaggtttccacaagccatcttaaacctttctactcttattggtcttagccttgggtttaataatctaactggagaggcatcatccaatcttggtaattgtctacccaaccttcagctacttgaattagaagacaactgctttcaagggcaaatcccctcttcgttgataaatgcttccaagctatatcgtcttgagctagcaagcaataacttcatcggtgtggtgcctagatccattggcaaactaaccaagctatcttggttaaatcttcagtccaataaacttcaagctcgtaacaagcaagattgggagtttcttgacagcttagccaactgcactgagctgaaagctttctcgatagctagtaatcatctagaaggacatgtgccaacttcattaggtaacctttctgttcagcttgtacaattgtttttgagtggaaatcaattatcaggtggttttccttctggcatagcaaaccttccaaacctgatttatattggactggacaacaaccagtttactggtgcagtcccaaaatggcttggaactctcagtaatttacaacagatattgttacatgagaacatgtttactgggtttattccaacatccctttcaaatttatctgtactgggatctctctggctagactataacaaaattggaggacctttaccagcaagcttgggaaacctgcaaacgcttgaaacattgagcatttcaaacaacaaactccatggtagtgtaccaatggagatcttcagaatcccaacaatacggttaattgatttgtctttcaacaactttgatgggcagcttagtgccagggtaggaaatgctaagcaactcatgtatttatatctttcatccaacaatttatctggaggtattcctagttcactgggcaattgtgaaagtttggaaggcatcaaattgggctcgaatattcttagtggaagcattcctacttcattaggcaacataagaagtctgaaagttctcaacttgtctcacaataacttaagtggatcaatacatgctaatcttggaaagttatggctccttgaacaagtagatttgtcatttaacaatctcagcggtgagataccaacagaaggaatattcttgaatgcaactgcagtgcacatcaatggaaatgagggtctttgtggcggggcactcaatttacacctacccacatgttatgtcatgcctttgaattcatctaggagtgaacgatctattttgctgtatttggtgatattatttgctagcctggtgtcagttatattcatatatctattattgctctggaggggaaaacagaagaaaaaatgtacatctttgaccccatttgatagcaaatttcccaaagtttcttacaatgatctcgccaaggcaactgaagcgttttcagcatctaatataattggaagaggaatatacagtcatgtttacaaaggggaattgttccaaggcagagatgtggttgctgttaaagttttcagcctggagacagaaggagcagaacatagttttatcacggaatgcaatgctttgagaaaagtgcggcatcgcaatctagttcctatcttaactgtgtgctcaagtctggatactaagggaaatgatttcagagccctggtgtataagttaattccacaaggagacttgtattctctactgcactcaactagagatagtgagaatggtttcacttcgaacatcattacattttctcaaaggctaagcattgttgtggacatagcagatgcattggaatatcttcaccataacaaccaagaaactgttgttcattgtgacataaagcctagcaatattcttctggacaatgatatgaaagcttatgttggagatttcggtcttgcgaggctcaaagctgatgctgcagtaccatctgtcggtgactcaaactcaacttctatgattgcaataaaaggaaccattggatatgttgctcctgagtatgcatctggtggtcaagtttcaactgctgcagatgtttatagctttggaattgttctccttgaagtattcttacggaagggaccgacagatgatatgttcaaggatggtctggatattgcaaaattcgttagtatgaactttcctgacaagatactagatattgttgaccctgtattactacaagacgaactggattgctcaaaggaatctccagttgccatgaaggaaatcttttctgagtgtttacattcagtgctaaacattggactttgctgcaccaagcagtccccgtacgagcgcatggacatgcgagaagtggctgcaaagctacatggaacaaggaggcatatctctgaggcaactagttcgtcgtatggaaacgagacagataagctctcactgcttgagttcaagaaggcaatcactcttgatccccagcaagtcctgatttcttggaatgacagcaatcacttttgcagctgggaaggagtcttgtgcagaaagaagacaaccaatcgtgtcatttctcttaaccttacgaaccaacgtttagtaggactaatctccccttctcttggaaacctaacattcctaaaatttctgtacttagacacaaattcattcaccggagagatccctctgtcccttggccacctgcatcatctccaaaacctctacttgagcaacaacacattacaaggaaaaatacctgattttacaaacagttccaacctcaaggtgctactcctcaatggcaatcacctcattggacaattcaataataatttcccccctcatcttcaagggctggacctttcattcaataatcttactggaaccatcccctcttctcttgccaatatcacggagctattgggtgttggtttcatgtcaaacaatatcaagggaaacatcccaaatgagttctcaaagttcgtctcgattgggtatcttgctgcgagtcaaaacatgttgtcaggaaggtttccacaagccatcttaaatctctctactcttgatgttctttaccttggttttaatcatctaagtggagatttaccatcaaatcttcttgactcgctacccagcatagaaatactttcattgggagggaacttcttccaagggcatatcccctgctctgtggtaaactcttccaacctaggtttactagacatttcatctaataattttactgggcttgtaccaagttccattggaaaacttaccaaactgtatcacctaaatcttcagtccaatcaacttcaagcacacagaaagcaggattgggactttatgaatggcttaaccaactgtactaggctacaaatgatctcgatagctaataaccgtctacaaggccatctaccaagttcattaggtaacctttcctctcaacttggaatgctacatttgggaggaaatcaaatatctggtgttttaccttcggacatagaaaacctctccagccttacttatttccggattgataccaatgaaattacaggtgtccttccagaatggcttggttttcttaaacacctacaagtattaggcttatttaacaacaacttcacggggtttattccaccgtccctttcaaatttgtctcagctgtgcttcccacaacaatcttcaagatggacaacttcctgcggcaatgcaaaacaactttcaaagttgtcacttgcatcgaataagctatctggagatattcctaacactttgggtgattttgaaagcttggaatacattgacttatcctggaataatttcactgggatcatccctgcttccataggaaagataacaagtctagaggttctcaaattctcacacaataacttaactgggccaataccatcattgcttggtgacctacattttcttgagcaactggatttgtcattcaaccatcttaaaggtgaggttcggatgaaaggaatattccagaatgtgacagccttgagcattggtggaaatgagggactatgtggtggatcacgagagttacacttactcgcatgccctgtcatatctttggtctcatctaagcacaagaaatcaattttactaaaaatactaatcccagttgcctgcttggtatcacttgctatggtcatatctattttttttacttggagggggaaacggaagagagaatccctatcattaccttcatttggtacaaatttccccaatttttcatataataatctattcaaagcaactgaggggttctcatcatccaatttaatcggcaaaggaagatatagttatgtctatgtaggaaaactatttcaagacaacattgttgctgttaaagtcttcagtctagagacaaggggagcacacaagagcttcatggcagaatgtaatgccttgagaaatgtgcggcattgcaatctacttcctatcctcactgcatgttctagtattgattctgaaggcaatgattttaaagcttaa
More
|
||||||||||
| Protein seq | MMVITTGKIILIFLACTAHVVTCSSLYGNETDRVALLEFKQAVRLDPKQALMSWNDSIHFCNWEGILCSLRIPYRVTSLNLTNRGLVGQISPSLGNLTFLSILSLTENSFSGQIPASLGHLNHLQTLWLSNNTLQGVIPDFTNCSSMKALRLNGNNLVGKFPQLPHRLQSLQLSYNHLSGTIPASLANITRLNVLTCTYNNIQGDIPHEIGKLSSLQFLYVGANKLVGRFPQAILNLSTLIGLSLGFNNLTGEASSNLGNCLPNLQLLELEDNCFQGQIPSSLINASKLYRLELASNNFIGVVPRSIGKLTKLSWLNLQSNKLQARNKQDWEFLDSLANCTELKAFSIASNHLEGHVPTSLGNLSVQLVQLFLSGNQLSGGFPSGIANLPNLIYIGLDNNQFTGAVPKWLGTLSNLQQILLHENMFTGFIPTSLSNLSVLGSLWLDYNKIGGPLPASLGNLQTLETLSISNNKLHGSVPMEIFRIPTIRLIDLSFNNFDGQLSARVGNAKQLMYLYLSSNNLSGGIPSSLGNCESLEGIKLGSNILSGSIPTSLGNIRSLKVLNLSHNNLSGSIHANLGKLWLLEQVDLSFNNLSGEIPTEGIFLNATAVHINGNEGLCGGALNLHLPTCYVMPLNSSRSERSILLYLVILFASLVSVIFIYLLLLWRGKQKKKCTSLTPFDSKFPKVSYNDLAKATEAFSASNIIGRGIYSHVYKGELFQGRDVVAVKVFSLETEGAEHSFITECNALRKVRHRNLVPILTVCSSLDTKGNDFRALVYKLIPQGDLYSLLHSTRDSENGFTSNIITFSQRLSIVVDIADALEYLHHNNQETVVHCDIKPSNILLDNDMKAYVGDFGLARLKADAAVPSVGDSNSTSMIAIKGTIGYVAPEYASGGQVSTAADVYSFGIVLLEVFLRKGPTDDMFKDGLDIAKFVSMNFPDKILDIVDPVLLQDELDCSKESPVAMKEIFSECLHSVLNIGLCCTKQSPYERMDMREVAAKLHGTRRHISEATSSSYGNETDKLSLLEFKKAITLDPQQVLISWNDSNHFCSWEGVLCRKKTTNRVISLNLTNQRLVGLISPSLGNLTFLKFLYLDTNSFTGEIPLSLGHLHHLQNLYLSNNTLQGKIPDFTNSSNLKVLLLNGNHLIGQFNNNFPPHLQGLDLSFNNLTGTIPSSLANITELLGVGFMSNNIKGNIPNEFSKFVSIGYLAASQNMLSGRFPQAILNLSTLDVLYLGFNHLSGDLPSNLLDSLPSIEILSLGGNFFQGHIPCSVVNSSNLGLLDISSNNFTGLVPSSIGKLTKLYHLNLQSNQLQAHRKQDWDFMNGLTNCTRLQMISIANNRLQGHLPSSLGNLSSQLGMLHLGGNQISGVLPSDIENLSSLTYFRIDTNEITGVLPEWLGFLKHLQVLGLFNNNFTGFIPPSLSNLSQLCFPQQSSRWTTSCGNAKQLSKLSLASNKLSGDIPNTLGDFESLEYIDLSWNNFTGIIPASIGKITSLEVLKFSHNNLTGPIPSLLGDLHFLEQLDLSFNHLKGEVRMKGIFQNVTALSIGGNEGLCGGSRELHLLACPVISLVSSKHKKSILLKILIPVACLVSLAMVISIFFTWRGKRKRESLSLPSFGTNFPNFSYNNLFKATEGFSSSNLIGKGRYSYVYVGKLFQDNIVAVKVFSLETRGAHKSFMAECNALRNVRHCNLLPILTACSSIDSEGNDFKA |
||||||||||
| Function | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_11g0004760 | OsLiXu_11g0004760.01 | Chr11 | 3534567 | 3542806 | + | NAM | ||
| CDS seq | atgatggttattacaactggaaagattatcttgattttcttagcttgcactgcacatgtcgtcacctgcagttccttatatggaaacgagacagatcgagtggcactgcttgaattcaagcaggcagtccgtcttgatccaaaacaagccttgatgtcctggaatgacagcatccacttttgcaattgggaaggcatcttgtgcagcttgaggattccatatcgtgtcacttctcttaatcttacaaatcgaggtttagtagggcaaatctctccttcacttggaaacctcacatttctatcaattctatcccttacagagaattcattcagtggacaaatccctgcatcccttggccacttgaaccacctccaaactctctggttgagtaacaacactctgcaaggagttataccagattttacaaattgttccagtatgaaggctctacggctgaatggcaataatctagttggaaaatttccgcagctgcctcatcgccttcaaagtctgcaactttcatacaatcatcttagtggaaccattcctgcttctcttgctaatatcacaaggctaaatgtgcttacctgcacatataataacatccagggcgatatcccacatgagatcggaaagttatccagcctgcaattcttgtatgtaggtgcaaataagttggttggcaggtttccacaagccatcttaaacctttctactcttattggtcttagccttgggtttaataatctaactggagaggcatcatccaatcttggtaattgtctacccaaccttcagctacttgaattagaagacaactgctttcaagggcaaatcccctcttcgttgataaatgcttccaagctatatcgtcttgagctagcaagcaataacttcatcggtgtggtgcctagatccattggcaaactaaccaagctatcttggttaaatcttcagtccaataaacttcaagctcgtaacaagcaagattgggagtttcttgacagcttagccaactgcactgagctgaaagctttctcgatagctagtaatcatctagaaggacatgtgccaacttcattaggtaacctttctgttcagcttgtacaattgtttttgagtggaaatcaattatcaggtggttttccttctggcatagcaaaccttccaaacctgatttatattggactggacaacaaccagtttactggtgcagtcccaaaatggcttggaactctcagtaatttacaacagatattgttacatgagaacatgtttactgggtttattccaacatccctttcaaatttatctgtactgggatctctctggctagactataacaaaattggaggacctttaccagcaagcttgggaaacctgcaaacgcttgaaacattgagcatttcaaacaacaaactccatggtagtgtaccaatggagatcttcagaatcccaacaatacggttaattgatttgtctttcaacaactttgatgggcagcttagtgccagggtaggaaatgctaagcaactcatgtatttatatctttcatccaacaatttatctggaggtattcctagttcactgggcaattgtgaaagtttggaaggcatcaaattgggctcgaatattcttagtggaagcattcctacttcattaggcaacataagaagtctgaaagttctcaacttgtctcacaataacttaagtggatcaatacatgctaatcttggaaagttatggctccttgaacaagtagatttgtcatttaacaatctcagcggtgagataccaacagaaggaatattcttgaatgcaactgcagtgcacatcaatggaaatgagggtctttgtggcggggcactcaatttacacctacccacatgttatgtcatgcctttgaattcatctaggagtgaacgatctattttgctgtatttggtgatattatttgctagcctggtgtcagttatattcatatatctattattgctctggaggggaaaacagaagaaaaaatgtacatctttgaccccatttgatagcaaatttcccaaagtttcttacaatgatctcgccaaggcaactgaagcgttttcagcatctaatataattggaagaggaatatacagtcatgtttacaaaggggaattgttccaaggcagagatgtggttgctgttaaagttttcagcctggagacagaaggagcagaacatagttttatcacggaatgcaatgctttgagaaaagtgcggcatcgcaatctagttcctatcttaactgtgtgctcaagtctggatactaagggaaatgatttcagagccctggtgtataagttaattccacaaggagacttgtattctctactgcactcaactagagatagtgagaatggtttcacttcgaacatcattacattttctcaaaggctaagcattgttgtggacatagcagatgcattggaatatcttcaccataacaaccaagaaactgttgttcattgtgacataaagcctagcaatattcttctggacaatgatatgaaagcttatgttggagatttcggtcttgcgaggctcaaagctgatgctgcagtaccatctgtcggtgactcaaactcaacttctatgattgcaataaaaggaaccattggatatgttgctcctgagtatgcatctggtggtcaagtttcaactgctgcagatgtttatagctttggaattgttctccttgaagtattcttacggaagggaccgacagatgatatgttcaaggatggtctggatattgcaaaattcgttagtatgaactttcctgacaagatactagatattgttgaccctgtattactacaagacgaactggattgctcaaaggaatctccagttgccatgaaggaaatcttttctgagtgtttacattcagtgctaaacattggactttgctgcaccaagcagtccccgtacgagcgcatggacatgcgagaagtggctgcaaagctacatggaacaaggaggcatatctctgaggcaactagttcgtcgtatggaaacgagacagataagctctcactgcttgagttcaagaaggcaatcactcttgatccccagcaagtcctgatttcttggaatgacagcaatcacttttgcagctgggaaggagtcttgtgcagaaagaagacaaccaatcgtgtcatttctcttaaccttacgaaccaacgtttagtaggactaatctccccttctcttggaaacctaacattcctaaaatttctgtacttagacacaaattcattcaccggagagatccctctgtcccttggccacctgcatcatctccaaaacctctacttgagcaacaacacattacaaggaaaaatacctgattttacaaacagttccaacctcaaggtgctactcctcaatggcaatcacctcattggacaattcaataataatttcccccctcatcttcaagggctggacctttcattcaataatcttactggaaccatcccctcttctcttgccaatatcacggagctattgggtgttggtttcatgtcaaacaatatcaagggaaacatcccaaatgagttctcaaagttcgtctcgattgggtatcttgctgcgagtcaaaacatgttgtcaggaaggtttccacaagccatcttaaatctctctactcttgatgttctttaccttggttttaatcatctaagtggagatttaccatcaaatcttcttgactcgctacccagcatagaaatactttcattgggagggaacttcttccaagggcatatcccctgctctgtggtaaactcttccaacctaggtttactagacatttcatctaataattttactgggcttgtaccaagttccattggaaaacttaccaaactgtatcacctaaatcttcagtccaatcaacttcaagcacacagaaagcaggattgggactttatgaatggcttaaccaactgtactaggctacaaatgatctcgatagctaataaccgtctacaaggccatctaccaagttcattaggtaacctttcctctcaacttggaatgctacatttgggaggaaatcaaatatctggtgttttaccttcggacatagaaaacctctccagccttacttatttccggattgataccaatgaaattacaggtgtccttccagaatggcttggttttcttaaacacctacaagtattaggcttatttaacaacaacttcacggggtttattccaccgtccctttcaaatttgtctcagctgtgcttcccacaacaatcttcaagatggacaacttcctgcggcaatgcaaaacaactttcaaagttgtcacttgcatcgaataagctatctggagatattcctaacactttgggtgattttgaaagcttggaatacattgacttatcctggaataatttcactgggatcatccctgcttccataggaaagataacaagtctagaggttctcaaattctcacacaataacttaactgggccaataccatcattgcttggtgacctacattttcttgagcaactggatttgtcattcaaccatcttaaaggtgaggttcggatgaaaggaatattccagaatgtgacagccttgagcattggtggaaatgagggactatgtggtggatcacgagagttacacttactcgcatgccctgtcatatctttggtctcatctaagcacaagaaatcaattttactaaaaatactaatcccagttgcctgcttggtatcacttgctatggtcatatctattttttttacttggagggggaaacggaagagagaatccctatcattaccttcatttggtacaaatttccccaatttttcatataataatctattcaaagcaactgaggggttctcatcatccaatttaatcggcaaaggaagatatagttatgtctatgtaggaaaactatttcaagacaacattgttgctgttaaagtcttcagtctagagacaaggggagcacacaagagcttcatggcagaatgtaatgccttgagaaatgtgcggcattgcaatctacttcctatcctcactgcatgttctagtattgattctgaaggcaatgattttaaagcttaa
More
|
|||||||
| Protein seq | MMVITTGKIILIFLACTAHVVTCSSLYGNETDRVALLEFKQAVRLDPKQALMSWNDSIHFCNWEGILCSLRIPYRVTSLNLTNRGLVGQISPSLGNLTFLSILSLTENSFSGQIPASLGHLNHLQTLWLSNNTLQGVIPDFTNCSSMKALRLNGNNLVGKFPQLPHRLQSLQLSYNHLSGTIPASLANITRLNVLTCTYNNIQGDIPHEIGKLSSLQFLYVGANKLVGRFPQAILNLSTLIGLSLGFNNLTGEASSNLGNCLPNLQLLELEDNCFQGQIPSSLINASKLYRLELASNNFIGVVPRSIGKLTKLSWLNLQSNKLQARNKQDWEFLDSLANCTELKAFSIASNHLEGHVPTSLGNLSVQLVQLFLSGNQLSGGFPSGIANLPNLIYIGLDNNQFTGAVPKWLGTLSNLQQILLHENMFTGFIPTSLSNLSVLGSLWLDYNKIGGPLPASLGNLQTLETLSISNNKLHGSVPMEIFRIPTIRLIDLSFNNFDGQLSARVGNAKQLMYLYLSSNNLSGGIPSSLGNCESLEGIKLGSNILSGSIPTSLGNIRSLKVLNLSHNNLSGSIHANLGKLWLLEQVDLSFNNLSGEIPTEGIFLNATAVHINGNEGLCGGALNLHLPTCYVMPLNSSRSERSILLYLVILFASLVSVIFIYLLLLWRGKQKKKCTSLTPFDSKFPKVSYNDLAKATEAFSASNIIGRGIYSHVYKGELFQGRDVVAVKVFSLETEGAEHSFITECNALRKVRHRNLVPILTVCSSLDTKGNDFRALVYKLIPQGDLYSLLHSTRDSENGFTSNIITFSQRLSIVVDIADALEYLHHNNQETVVHCDIKPSNILLDNDMKAYVGDFGLARLKADAAVPSVGDSNSTSMIAIKGTIGYVAPEYASGGQVSTAADVYSFGIVLLEVFLRKGPTDDMFKDGLDIAKFVSMNFPDKILDIVDPVLLQDELDCSKESPVAMKEIFSECLHSVLNIGLCCTKQSPYERMDMREVAAKLHGTRRHISEATSSSYGNETDKLSLLEFKKAITLDPQQVLISWNDSNHFCSWEGVLCRKKTTNRVISLNLTNQRLVGLISPSLGNLTFLKFLYLDTNSFTGEIPLSLGHLHHLQNLYLSNNTLQGKIPDFTNSSNLKVLLLNGNHLIGQFNNNFPPHLQGLDLSFNNLTGTIPSSLANITELLGVGFMSNNIKGNIPNEFSKFVSIGYLAASQNMLSGRFPQAILNLSTLDVLYLGFNHLSGDLPSNLLDSLPSIEILSLGGNFFQGHIPCSVVNSSNLGLLDISSNNFTGLVPSSIGKLTKLYHLNLQSNQLQAHRKQDWDFMNGLTNCTRLQMISIANNRLQGHLPSSLGNLSSQLGMLHLGGNQISGVLPSDIENLSSLTYFRIDTNEITGVLPEWLGFLKHLQVLGLFNNNFTGFIPPSLSNLSQLCFPQQSSRWTTSCGNAKQLSKLSLASNKLSGDIPNTLGDFESLEYIDLSWNNFTGIIPASIGKITSLEVLKFSHNNLTGPIPSLLGDLHFLEQLDLSFNHLKGEVRMKGIFQNVTALSIGGNEGLCGGSRELHLLACPVISLVSSKHKKSILLKILIPVACLVSLAMVISIFFTWRGKRKRESLSLPSFGTNFPNFSYNNLFKATEGFSSSNLIGKGRYSYVYVGKLFQDNIVAVKVFSLETRGAHKSFMAECNALRNVRHCNLLPILTACSSIDSEGNDFKA
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.069308 | 0.0 | 0.207049 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0172150 | SBH | 0.334251 | 0.208603 | 1.256389 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g07120 | RBH | 0.132355 | 0.181579 | 0.257113 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0172300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0004880 | SBH | 0.073252 | 1.695642 | 1.332235 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0004930 | SBH | 0.145897 | 1.520357 | 0.670409 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0004950 | SBH | 0.351912 | 0.244407 | 1.702016 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0004780 | SBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0004670 | SBH | 1.364498 | 1.938285 | 3.784618 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0060500 | SBH | 1.0585345 | 6.957708 | 3.945736 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0004810 | SBH | 0.297846 | 0.021683 | 0.170285 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0061100 | RBH | 1.5741045 | 11.4858855 | 8.5262935 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0004700 | SBH | 0.672407 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0004780 | RBH | 0.074646 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0004780 | RBH | 1.135962 | 7.780177 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0004780 | SBH | 0.152264 | 0.0 | 0.102352 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0004780 | SBH | 0.030375 | 0.429481 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G004890 | RBH | 0.838538 | 0.000000 | 0.368926 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0004760 | RBH | 0.213715 | 6.480726 | 0.241156 |
