Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsGoSa_07g0020290 OGI:07004740 | 16/16 GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) Chr07:23962696-23975456
Gene Symbol SIT3
DNA seq

ttatcttccctccgacataatagtcatagatgatgcaccagacacggtgccaatgcttgtcgccgaccgggggccgcccgacatgatgaatgaatcgaacccttcgttttgcattatcgccatcatgctatagctcacgtagctcggcgataggtcaggagccgacttaccgccacgctccaggtattgcatgacattccgcatgctgggcctcgcaccgggtagcgggtgcgaacacaacaaacccagcttcagaacgagggccacctcctccacatcgaacttccccgtgagccgtggatccgccgcaccaacgatcgagccattgcggtggtgctcaagcaccaagtcgactagcaccacccgtttgttgtgctcgtcggtctcgatcggcctccgcccgcatgtcacctccaataagaacaccccgaacgcgaacacgtcggttaagggtgacgccttccctgtacggacgagctctggtgctaggtagcccatggtgccaaccacatgcgttgttttggggtcggtgccatggtcgtacagccttgccaggccaaaatcacctagccgcccgttcattgcactgtctaagagcacgttgctcgcttttatgtctcgatggatgactacttgctcccaatcctcgtgtaggtacaacaaacctgatgcgacgcctttgatgatccagagccgctcgggccaaaatagagttgtaacatttctctcatgcaagtacttgtcaagactaccattcgccatgtaatcgtacaccaacaggagttcattcttgcggcggcaatagcctagtaactgcacgagattccgatgtcgaagtcggccaatgctcaccacttccgcgacgaactcccttataccttgccttgaatcatgtgaaaccctcttcaccgcaatctccaaattggactccggtagcacccctctgtaaactctcccaaaccctccaacacccagcaaatttctatccttgaacccatccgtcgcgcggaacaaatccttgtatgcgaaccggtgcgggccaaactcatcctcccaatcttcccgcacctcggcgaagcggcgccgccgccgcacgacgaagaagacggcagctagcaccgcagcgacgagaaatgcggtggccagcggaagcacaatgtccaggaccttggaccgaggcttcggaccgaagcgtggcagccggggaagcttggagagatcgaggggaggagctggcccgtcgaagccgaagctccagccgagcacgtagtggtgggtgttcacgacgcccgtcgccgacgagaagccgacgtacatctcctcggccatgaccgtggagaggtcgatggcctgggagagcagaggcttcttgggcttaggcacttgcacgggagacagcgtcacgttgagctgcttggcctggccgtcgtagtccacccacacctgcatcggctggcggctgttcagcctgagctcacggaaggcgccgtcgccgtcgccgtagtagccggccggccgtgcctgcgtcgacatgaggctgttggcgtcgatgccgacgtggttgctgctgatgtcgtggaactcggggttcatgatggtgtccagctcgacggccaggatttggccgctcgccgtgccgttcgtcgcgttgaggaagcccaggtactgcccggcgttcgccgccgagaggttcgccgtcggcgcgaccacgaacgcgagcccgtggtcgctcaggccgtcgtacccggacacgatggcgaacacgaaagccgtggagaaggaccgcgccacgtcggctccggcgccaccgctggcgttcgcccccgccgccgccgtggaggactcgccgaggaagcggagaggcgccgggtgaaacgcgtgcgctttcgcctggtacgtgaagttggtgagcacgaggagcccgctcgccgtgacggtggcgaggccgtccacggtaaggttcgccgccgcgaacccctggtacgtgaactggccatcgccgccggcggccgaggccaccaccacgtcgttgctcaagctgaacacgaggagaagaacgaagtgtgcagaaaatttggcaatcatacgacccattttttttcccgtgacacttcgccttgacgcctcttaaggatattgtagcaattggctaacataaactgcttggcttatgatcgagtggttgggtgtcgagcgatgagagctgaaagattcagatcgacaaggacatgttttggcacgaacagacaaccatcagccggccggcgaccattaacccagtacactttggtggatggattattgaatttgttatcaatgtcaagtagtcagcaacaacactgtcttcacggagatactccctccgtcctaaaaaaaagacaaaccctgagttttcgtgtccaacgtttgaccgtccatcttattcattcaaatgttggacacggaaattaagggtttgtcttttttttagggggcagagggagtatcttgctagcgatggctgcactccgcatgcgttgatcatcctgtccaatagtgattactggatcggcaaacatcaacgtcggcggctgcaagtttcagaggcgtgtgccttggtaggcgccgtgccctgcagggtaagacgactactctctcgccgtcctgattttcgcatagatcgatttaattttcgtactttcgacggtgactcttctaggttgctggacaaaaaaattgcattctgtcgaacacatcgatcgagaagtagtagcacttgagcaatatagtggtcaaagagaccagagattattattcagagattgtttttacctgtttcaaaggactctctctctctctctctctctaagaaaacttttctgaagaatcaatggacttgtggactgctctgctagctgccgtttggatgctggtgcctttgttctacgctactattctagtttcaacgaagtagtaggagaagatgaggttttgactcctgacagtgagatgtttctacttcacaaggatcagtcttggtttcaaacgtctcaatttgcgaatgattttgacaagcactgtggaggagattctagctatcgtcatatggcggtccatagtttgataaattcatttggccggcgccgcttcaattaatacttgtcaatttatacgtttagtctttgtatgataggtactgaagggcgttcaatggcctgaactgaagatggatcacatgcgttcatttaagttcatgaaagaaacagaagcagctgctgcacaacaccaccaatcggattagctagatcctaaagactacatccatgaaaactagcaccttgctttctcttgacaggaaatttttgtagatgcacgtaaaacttgtgattaatcatgacaagtcctactgtagagtgcaagagtccgcatgaatatttatattggcagtactagttagttgtaatagcccgacagccgttacctcctccTCCTtcggcgatggctaccagtcagtagcggtgggtaaacaatctgcttccttccaataacatattgtgttattgatgcgcaagtctttttgcgtgttcgccaaagaaaaatagcagcgctagtttttctttctatcaagagtagttttatactcttggttatgtactttctattataaaactaggtattaCttttttttttagaaaaaaaccttttgatacttttcaagattgctactccctccgggttgataatacttgtcgttttggacaagggcacggtcttcaaaaaacaactttgacaattatttttcattataatatgtataaaattgttagcaaatatatgatcttattaaagtactttttaagactaatctatacatgtagtcaccatctttgaaagacaaatattttaaaaatgattcataatcaaatattctaaagtttgacttcacccttgtccaaaacgataagtattatcagcccgaagggagtacttaactgtttagtgcatcccgatgctgtatcaaactatgaacataatcaagacagaagaatctcgatttcatagtacaaggagaacaagatagttaaagcatctagttacaccgttaacatactcttaactgcaatgctacaagcaccatttttggccctactttgggagtatctgatgtgtgccttttttttttgaatttttagccccctaaacagtccattataattcagaaaataaactagaagtaataaactgagaaacccgatttttcatatcctcaccaactgcttctcaaaatcacgagctcccttcctttgtcaccttcctcccgagatatcagaaatggcacccatgcttgctgatgagatgtatgaaatggaattgcggttgaactccttgtacatccgctctagtgaagtgaagcttaggtacgtcggtgacaaatccggtagggccatatcaccgtcgaggtactgagcgacctgccgcattgttggcctagcattgggcaatggatgcgagcagagcagcccaagttttagaaccagagaaacctcgtcaggatcaaaaccgctcggaatcctcgcgtccaccacgttaacaagtgcacccttgctccactgctcagtcacccagtccacaagcacggcacggttgccgtgctcatcctgcacgattggccttcttccgcaggtgacctcgaggaggaatgcgccgaacgcgaacacgtcggttgatggggttgccttgccggtgtgccccaactcaggggctaggtaccccatagtgccgaccacatgtgttgtctgtgcaacagctccgtgatcatacaaccttgcgaggccaaagtcgcctagtcgaccgttcatctcaccgtcgaggagcacgttgctcgccttgatgtctcggtggatgacaacgtgttcccaatcctcgtgaaggtacagtagcccagacgccactcctctgatgatgtggaatctctgaggccaacttagtgggtgcttgcttccatcgtaaaggtatttgtcgaggctaccttttggcatgtaatcgtacaccaagagaagttcacctttacgacggcaatagccgagtagttgcacgaggttgcggtgtcgcaagcgaccgatgctcgcgacctctgcgacgaactccttcatcccttgtctcgattcgtgtgacaccctcttcactgcgacctccatgtcgggcttgcggagcacgcctcggtacacgctcccgaaccctcccgtgccaaggaggttcttgtcgctgaatcccttggtcgcatggaacaagtccttgtaggagaatcggtgcggcccaaacgcggtctcccactcctcccgcagctcggcgtacctgagccgccgcctcgccatggcgtacaccgccatggccacggcggcgaccagcgccgccgacgctatgggcagcacgatctccagcaccttcgaccgcggcttgggccaagcccgcggcaacggcggtagcgacgagatgttcagcggcggggctggcccgtccaccgcgaagctccagcctagcacgaagtggcgcgagaagaggatgcccgtcgccgacgcgaacccgacgtgcgccgcgcccgtcgcgacgtcggagaggtcgacgttggtccgcagcagcggcttcttgggcctggccgtgcccaggggagccatggccacggtgacctccgtgctcccgccgtcgtagtccacccacgcctgcatgggcttccggctgatcatggtcaggttccggaactggccggtgacgtcatcgtagtagccggcgtcggcggccttgaccgacgtcaggctgttgacgtcgacgccgacgtggttgctgttcaggtcgtggaactcggcgttgaagagcgtgtcgaactccacggcgaagacgccggcggcgctccggttgccggtggtggcgccggtgccgttgaagaggcccaggaactggccaggcagcgcggcggcgaacgcgtccgcggacgcggagacgaagaaggccaggccgtggctgctgaagtcggcgtactgcccgaagatggcgaacacgaacgtcgtcgagaaggacctcgccgcgcggagcgggagcggcgacgggtggaacgcgtggcctttcatctggatggacccgttggtcagcatgaggaggccgctcgccgtgaccgtggccgcgccgtcgagggtgaggttggcgcccgagaagccatcgtacgcgaactgcaggccgccgctgccgccggtggccgcggcgcagcggtcggcagccgcgaggaggagcaggagcagagtgaaacagtggaaaggctcacgaagcatggtgtttgcatcacttcgccgtggcgcagctagcttatttgcttgtcgattcgactgtctgaattcgatctctgaatttctgaacagcaaatcgatttggagaggctttttgtccctgtttgcagggagaaaattctgggaacctactgactgactgactgaataatcatgcatggatgggtcatgagtccaacaatttgcgctagctgctcgcgctgcgatcaggtcaatttcacccaatctttaaaacctggaaatgtgatataataaccggagtgctgaggccctctttgtttaggcttataagccaacttataaaccgaaatgtctaagtctaaacaaacaagcagttttttcgtttgacttttttaaagccataagtcactttaacactattaagccaaaagctagattaaataagttttttttggcttatatgaggtagatgtatgactccaccactaaacttagaacattaaatccactggcttataaatcatataagtcaataagctgacttaaaagtctaagtcaataagcctaagcttaaacaaagagggcctcaatatgctggtcaactttcaacaactcttgcgatgcaaatgatatttgttgataacatatctttagttagaactactataccacgcctttaatgaatatatatatgttggttatttgctaaattatacgcaaatttacaacttgctaactattacctccaaatttaagcacgatcaaatttaatgataattaaaactAaaaaaaaataaatgacagtgccgttcgactcagcgttttggttgagtttatatccagcacgcaaaatgagacgtgtcattagcaagtgattaattataaactagaaaataaatttatttaattttttcgagaaacttttatataggaaaaaaatgtacataatgtgttgtttggcagtttgggaaatatggtaatgAaaaataaggaagttgccatttaagttactgaaaagacctcagccttagccctattgtgtcaaaggctcaaagccctcctctttgtctaaataatagaataaactcaaaataacaaaataaaatacttgataatgattattagtaaatttttgaaattttgaaattatcttttgtattatgccgtatctttgagtgctttgtttgcaataataagtAaaATAATATAAAATCCAAAAAAGTATAAATTTTTTTAACCTAAATTCTATTGATTATAAACCCCAATTTTATCACAAGTGAAGAAAAGTTAAATCTAATTGAAAACTTGAACTAAAGTAACTGAGTACACTTTTCAACATTTATCTTATATTCTGTAAACAAATACTCCCTCCGTTTCACAAAGTAAGTCATTATAACATTTCCCACATTCATATTGATGTTAATGAATCTAGATAGATATATATGTCTAGATTCATTAACATCAATATGAATATGGGAAATACTAGAATGACTTACATTGTGAAACGGAGGAAGTAGTTATCTTCTTAAAAAGATATTAAAAATGTTTTTCTTTCCTCGAAAGGGTCATTTCCCAAAAATCGTAAATTCAAACCTTTGGTTTTAAATACAAATTCAGGAACTCAAATATATTATATTATTAAAACAGCTTTGAAAGGAGGTACCACGTTCGCTGTGGGGGCTAGAAATTTTCACATTAATCggagaaaaagaaaaaaaaagaaaagaagagtccaagtagaaatacaatctaaaaatagctgaaattcggaattaaaaataagcaatattgaaggaagtttccatataagaacccaatacgagattaattaaaattcgaaataaaaataaaataaaatctaaaattagaaaaaaagagagagtccaagtagaaataaaatttaaaaatagctgaaattcggaattaaaaataaggaatattgaaaaaagttttcatataagaacccaatatgagattaatcaaaattcgaaataaaaataaaataaaatccaaaatcagaaaagaaaatgatagtccaagtaggaatacaattttaaaatagttaaaattcagaattaaaaataaggaatattaaacgaagagtccgtataagaacctaatacgagattaaataaaattgggaataaaaataaaaataaaatccgaaattagcAaaaaaaaaacaaaagaagagctcaagtagaaatacaatttaaaattagctgaaattcagaattaaaaataagcaatattgaaagaagaatccatataagaacccgatacgaaattaattaaaattcagaatAaaaaataaaataatatccaaaattagataaagtaaatgagatttcaagtaggaaaacaatattgaaacaactgaaattgaaaataaaaaataaaaatattaaaagaacataatacgatattaattaaTTtttttttaaaaaaaatctgaaattagaaaaaagaaaaataaaattccaattaggaatacaatttataaataactaaaatttgtgataaaaataaagactattgaaagaaaagaccatgtaaaacacatgacgagataaattaagtaacaggcatataaaggagtagaGTggtggcggttgatacgacATaaaaaattgttaatgaaacaccaaatagaatcctaatgacgattaaaaggaggggcgacagggaggccgtaaagcaaacgatcaaggcgattgccgggacttctagaaagtAaaaaaaataaaccccattgataatcatatttgatttttaaaatctcaatgacaataaaaaggagaagcagtgggcggggtgtataggagtatagttgcagagctgccgacggttgacgggacttctaaaaaataaaaaatgaattccaacgatagttatgttcgatttttagaatcccaatgacaataaagagtaggcggcggacgggccgtagaggagcatagtgacatcgtttgacaagacttctaaaaattataaaaaaataaagcccaacaagacaataaactctaaaaactacaaggttcaaTttttgaaggttcggaacttctaaaaagtAaaaaaaaacaatgataatcatattcgattttaaaatctcaatgacaataaaaaagggaggtagcgggcgagccgtagagaagtacaatggcaatggcaaagtcactgacggtttggcgggacttctagaaagtaaaaatgaacctaaatgataattatgttcgatttttaaaatctcaatgacaataaagagaagagatagtagacgggtcatagaggagtataatggcaacgtttgacatgacgtctagaaattataaaaacgaaactcaacgtgaaaataaactctaaaacctataagatccaatgtttaaaggttctaaggagaatgaatagaaatagtggtagatcgagcaagcaaataaagaagaagatgacataaggggtagtatctggtgtgacttttaaaataatatataattagaaacatggggatgataatgtttggtctttcaaactcttaagacaataagatagctatttaataaatttttagtaaaatcataaaaaaatatataattttgtttgggtgctagccgcgcaattgcgcgggcaacccagctagttcttttcataacctagaaaaatcccataaataccttaggcttcgttcttcctgggagatctaggagattgagagagaaaaacatctcgttttccacgcgcacgcttcccaaactactaaatggtgcgttttttggaaaaaaattatataggaaagttgctttaaaaatcatattaatccttttttgaaatttaaaataattaataatcaattaatcatgagctaatggctcacctcgttttgcgtatactacaaaatgcctttataatgaaacttacttgtgaaccactccattttagtcaaatttaaactccataaaaatcacataagttcaaatgtgacacccttcattgcccacaccatgtgtcaatttcatatcatcttttaagcatataaatgtgcaatacaacagtagcagtactaaatcagcataggaattttatgcttcttgagactccggttcaacttgtttacacatcttgtatcttaaaaaatttcacttttttttatagaatctaatagaaattaaaaaaaaaactagggctcaagtcttagctgccttaggcttgtcgcagcctctgatatctactggtcgtgtgttaaatagggcacaattacgatgcgtgtgtagtatatatgtgtcttctatcaagaaaaaaatgattaaaaataggaactctaaaagtgcataattgtttgcattcactaacaacaaaatacaaaggattaccgagcccactgacaagtatcgggtacaagcttcagaatcatctcccgtccgagagaaccgaagcagatgacattgtaccaacactattatctaacaaagaggaccacacgggtaaactatgtgaaccaaccccattctgtagcatcaactccatcatgttatagctcatgtgcgtcggtgatagctctggtgctggaagcataccatcgaggtacttcacaactttgtccatgcttggccttgccttgggcaatggatgtgagcacattagtcctagtttcaaaacaagattcacctcctcgaagctgaacctccctgcaagccggggatccaccacgttaaggatggatccgctaagaaaatgcttcagcacccaatctattaatagaatctcgttgctatcgctttccccaatcggccttcgtccacaggtgacctcgaggaggaacacaccgaacgcgaacacgtccgtcaacggtgttgccttccccgtgtgcatgagctctggggcaatgtaacccatagttcctaccacgtatgtggtctttgcatcggctccatgatcccgtagccttgacaagccgaaatcccctaatagtccattcatctcgctgtctagaagaacattgcttgccttgacatctcgatggatcactacttgctcccaatccttgtgtaggtacgataatgccgacgcaacacctttgatgatgtggatcctcttgggccaacagagtgtggttgatgtagcattatcatgcaaacacttgtcaagactaccatttgtcttgtagtcataaacaaggagaagttctcccttgcgccgacagtaacccaggagccgcacgatgttccggtgtcggatacggccgatgcttaccacctcagcaataaactctctcatcccttgtcttgaattgtgtgacacctgtttcaccgctatctctgtattggacacgggaagcacacccttgtacacgctcccaaaccctcccgcaccgagtaggttcttgtctgtgaatccctgcgtagcatgaaacagatccttgtatgtgaaccgatgcggaccaaactcaacctcccaatcttcgcgcacctccgcatactgccggtgccaccttctcacgaagaagacAcccagaacaaacgcaacaagaaacagtagtgcactggcaatcggcaacacaacatacagcattactgaccgacgtgtaggacccactcgtggcaccttgggcagcatggagaagtccagtgagggagcagctccgccgtcgaagctgaagctccatccgaggacgtagtggtgcgtgaacacgacgcccgtcgccgacgagaagccgacgtacatctcctcggccatgaccgtggagaggtcgatggcttgggagagcagaggcttcttgggcttgggcacttgcacgggagacagcgtcacgttgagctgcttggcctggccgtcgtagtCCACccacacctgcattggcttctggctgttgagctgcaggctccggaacgcgccgtcgccgtcgacatagtagccggcggtcttcgcctgcagcgacctgaggctattgacgtcgacgccgacgtggttgctgtcgatgtcgccgaactcggggttcgtgatgatgtcgagctcgacggcgaacacgtggttgctcggcttgccgtcgtcggccatgctgaggaggcccaggtactggccggcgttcgccgtggagaggttcttggtcggggagaccacgaacgcgagcccatggtcgacgttgttcctgaacctggggtcgtcggacacaatggcgaacacgaacgacgtcgagaaggaccgcacggtggcggcggcggacgacgacgtgttgaggaagcggagaggcgcagggtggaacgcgtgggctttcgtttggtacgtggcgttggtgagcgcgaggagcccggtcggcgtgacggcggcgaggccgtccatggtgaggtcctccgccgtgaagccgtggtggacgaaccggccatcgctggctgcagggttggccaccgccgctccaatgttcacgctaaggcagtggatgaacacgatattgatgaacacaacgagcatcgttttgctgtggagttgcat

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CDS seq

atgcaactccacagcaaaacgatgctcgttgtgttcatcaatatcgtgttcatccactgccttagcgtgaacattggagcggcggtggccaaccctgcagccagcgatggccggttcgtccaccacggcttcacggcggaggacctcaccatggacggcctcgccgccgtcacgccgaccgggctcctcgcgctcaccaacgccacgtaccaaacgaaagcccacgcgttccaccctgcgcctctccgcttcctcaacacgtcgtcgtccgccgccgccaccgtgcggtccttctcgacgtcgttcgtgttcgccattgtgtccgacgaccccaggttcaggaacaacgtcgaccatgggctcgcgttcgtggtctccccgaccaagaacctctccacggcgaacgccggccagtacctgggcctcctcagcatggccgacgacggcaagccgagcaaccacgtgttcgccgtcgagctcgacatcatcacgaaccccgagttcggcgacatcgacagcaaccacgtcggcgtcgacgtcaatagcctcaggtcgctgcaggcgaagaccgccggctactatgtcgacggcgacggcgcgttccggagcctgcagctcaacagccagaagccaatgcaggtgtggGTGGactacgacggccaggccaagcagctcaacgtgacgctgtctcccgtgcaagtgcccaagcccaagaagcctctgctctcccaagccatcgacctctccacggtcatggccgaggagatgtacgtcggcttctcgtcggcgacgggcgtcgtgttcacgcaccactacgtcctcggatggagcttcagcttcgacggcggagctgctccctcactggacttctccatgctgcccaaggtgccacgagtgggtcctacacgtcggtcagtaatgctgtatgttgtgttgccgattgccagtgcactactgtttcttgttgcgtttgttctgggTgtcttcttcgtgagaaggtggcaccggcagtatgcggaggtgcgcgaagattgggaggttgagtttggtccgcatcggttcacatacaaggatctgtttcatgctacgcagggattcacagacaagaacctactcggtgcgggagggtttgggagcgtgtacaagggtgtgcttcccgtgtccaatacagagatagcggtgaaacaggtgtcacacaattcaagacaagggatgagagagtttattgctgaggtggtaagcatcggccgtatccgacaccggaacatcgtgcggctcctgggttactgtcggcgcaagggagaacttctccttgtttatgactacaagacaaatggtagtcttgacaagtgtttgcatgataatgctacatcaaccacactctgttggcccaagaggatccacatcatcaaaggtgttgcgtcggcattatcgtacctacacaaggattgggagcaagtagtgatccatcgagatgtcaaggcaagcaatgttcttctagacagcgagatgaatggactattaggggatttcggcttgtcaaggctacgggatcatggagccgatgcaaagaccacatacgtggtaggaactatgggttacattgccccagagctcatgcacacggggaaggcaacaccgttgacggacgtgttcgcgttcggtgtgttcctcctcgaggtcacctgtggacgaaggccgattggggaaagcgatagcaacgagattctattaatagattgggtgctgaagcattttcttagcggatccatccttaacgtggtggatccccggcttgcagggaggttcagcttcgaggaggtgaatcttgttttgaaactaggactaatgtgctcacatccattgcccaaggcaaggccaagcatggacaaagttgtgaagtacctcgatggtatgcttccagcaccagagctatcaccgacgcacatgagctataacatgatggagttgatgctacagaatggggttggttcacatagtttacccgtgtggtcctcttttgatgcaaacaccatgcttcgtgagcctttccactgtttcactctgctcctgctcctcctcgcggctgccgaccgctgcgccgcggccaccggcggcagcggcggcctgcagttcgcgtacgatggcttctcgggcgccaacctcaccctcgacggcgcggccacggtcacggcgagcggcctcctcatgctgaccaacgggtccatccagatgaaaggccacgcgttccacccgtcgccgctcccgctccgcgcggcgaggtccttctcgacgacgttcgtgttcgccatcttcgggcagtacgccgacttcagcagccacggcctggccttcttcgtctccgcgtccgcggacgcgttcgccgccgcgctgcctggccagttcctgggcctcttcaacggcaccggcgccaccaccggcaaccggagcgccgccggcgtcttcgccgtggagttcgacacgctcttcaacgccgagttccacgacctgaacagcaaccacgtcggcgtcgacgtcaacagcctgacgtcggtcaaggccgccgacgccggctactacgatgacgtcaccggccagttccggaacctgaccatgatcagccggaagcccatgcaggcgtgggtggactacgacggcgggagcacggaggtcaccgtggccatggctcccctgggcacggccaggcccaagaagccgctgctgcggaccaacgtcgacctctccgacgtcgcgacgggcgcggcgcacgtcgggttcgcgtcggcgacgggcatcctcttctcgcgccacttcgtgctaggctggagcttcgcggtggacgggccagccccgccgctgaacatctcgtcgctaccgccgttgccgcgggcttggcccaagccgcggtcgaaggtgctggagatcgtgctgcccatagcgtcggcggcgctggtcgccgccgtggccatggcggtgtacgccatggcgaggcggcggctcaggtacgccgagctgcgggaggagtgggagaccgcgtttgggccgcaccgattctcctacaaggacttgttccatgcgaccaagggattcagcgacaagaacctccttggcacgggagggttcgggagcgtgtaccgaggcgtgctccgcaagcccgacatggaggtcgcagtgaagagggtgtcacacgaatcgagacaagggatgaaggagttcgtcgcagaggtcgcgagcatcggtcgcttgcgacaccgcaacctcgtgcaactactcggctattgccgtcgtaaaggtgaacttctcttgttggggcacaccggcaaggcaaccccatcaaccgacgtgttcgcgttcggcgcattcctcctcgaggtcacctgcggaagaaggccaatcgtgcaggatgagcacggcaaccgtgccgtgcttgtggactgggtgactgagcagtggagcaagggtgcacttgttaacgtggtggacgcgaggattccgagcggttttgatcctgacgaggtttctctggttctaaaacttgggctgctctgctcgcatccattgcccaatgctaggccaacaatgcggcaggtcgctcagtacctcgacggtgatatggccctaccggatttgtcaccgacgtacctaagcttcacttcactagagcggatcttgagcaacgacgtggtggtggcctcggccgccggcggcgatggccagttcacgtaccaggggttcgcggcggcgaaccttaccgtggacggcctcgccaccgtcacggcgagcgggctcctcgtgctcaccaacttcacgtaccaggcgaaagcgcacgcgtttcacccggcgcctctccgcttcctcggcgagtcctccacggcggcggcgggggcgaacgccagcggtggcgccggagccgacgtggcgcggtccttctccacggctttcgtgttcgccatcgtgtccgggtacgacggcctgagcgaccacgggctcgcgttcgtggtcgcgccgacggcgaacctctcggcggcgaacgccgggcagtacctgggcttcctcaacgcgacgaacggcacggcgagcggccaaatcctggccgtcgagctggacaccatcatgaaccccgagttccacgacatcagcagcaaccacgtcggcatcgacgccaacagcctcatgtcgacgcaggcacggccggccggctactacggcgacggcgacggcgccttccgtgagctcaggctgaacagccgccagccgatgcaggtgtgggtggactacgacggccaggccaagcagctcaacgtgacgctgtctcccgtgcaagtgcctaagcccaagaagcctctgctctcccaggccatcgacctctccacggtcatggccgaggagatgtacgtcggcttctcgtcggcgacgggcgtcgtgaacacccaccactacgtgctcggctggagcttcggcttcgacgggccagctcctcccctcgatctctccaagcttccccggctgccacgcttcggtccgaagcctcggtccaaggtcctggacattgtgcttccgctggccaccgcatttctcgtcgctgcggtgctagctgccgtcttcttcgtcgtgcggcggcggcgccgcttcgccgaggtgcgggaagattgggaggatgagtttggcccgcaccggttcgcatacaaggatttgttccgcgcgacggatgggttcaaggatagaaatttgctgggtgttggagggtttgggagagtttacagaggggtgctaccggagtccaatttggagattgcggtgaagagggtttcacatgattcaaggcaaggtataagggagttcgtcgcggaagtggtgagcattggccgacttcgacatcggaatctcgtgcagttactaggctattgccgccgcaagaatgaactcctgttggtgacatgcgggcggaggccgatcgagaccgacgagcacaacaaacgggtggtgctagtcgacttggtgcttgagcaccaccgcaatggctcgatcgttggtgcggcggatccacggctcacggggaagttcgatgtggaggaggtggccctcgttctgaagctgggtttgttgtgttcgcacccgctacccggtgcgaggcccagcatgcggaatgtcatgcaatacctggagcgtggcggtaagtcggctcctgacctatcgccgagctacgtgagctatagcatgatggcgataatgcaaaacgaagggttcgattcattcatcatgtcgggcggcccccggtcggcgacaagcattggcaccgtgtctggtgcatcatctatgactattatgtcggagggaagataa

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Protein seq

MQLHSKTMLVVFINIVFIHCLSVNIGAAVANPAASDGRFVHHGFTAEDLTMDGLAAVTPTGLLALTNATYQTKAHAFHPAPLRFLNTSSSAAATVRSFSTSFVFAIVSDDPRFRNNVDHGLAFVVSPTKNLSTANAGQYLGLLSMADDGKPSNHVFAVELDIITNPEFGDIDSNHVGVDVNSLRSLQAKTAGYYVDGDGAFRSLQLNSQKPMQVWVDYDGQAKQLNVTLSPVQVPKPKKPLLSQAIDLSTVMAEEMYVGFSSATGVVFTHHYVLGWSFSFDGGAAPSLDFSMLPKVPRVGPTRRSVMLYVVLPIASALLFLVAFVLGVFFVRRWHRQYAEVREDWEVEFGPHRFTYKDLFHATQGFTDKNLLGAGGFGSVYKGVLPVSNTEIAVKQVSHNSRQGMREFIAEVVSIGRIRHRNIVRLLGYCRRKGELLLVYDYKTNGSLDKCLHDNATSTTLCWPKRIHIIKGVASALSYLHKDWEQVVIHRDVKASNVLLDSEMNGLLGDFGLSRLRDHGADAKTTYVVGTMGYIAPELMHTGKATPLTDVFAFGVFLLEVTCGRRPIGESDSNEILLIDWVLKHFLSGSILNVVDPRLAGRFSFEEVNLVLKLGLMCSHPLPKARPSMDKVVKYLDGMLPAPELSPTHMSYNMMELMLQNGVGSHSLPVWSSFDANTMLREPFHCFTLLLLLLAAADRCAAATGGSGGLQFAYDGFSGANLTLDGAATVTASGLLMLTNGSIQMKGHAFHPSPLPLRAARSFSTTFVFAIFGQYADFSSHGLAFFVSASADAFAAALPGQFLGLFNGTGATTGNRSAAGVFAVEFDTLFNAEFHDLNSNHVGVDVNSLTSVKAADAGYYDDVTGQFRNLTMISRKPMQAWVDYDGGSTEVTVAMAPLGTARPKKPLLRTNVDLSDVATGAAHVGFASATGILFSRHFVLGWSFAVDGPAPPLNISSLPPLPRAWPKPRSKVLEIVLPIASAALVAAVAMAVYAMARRRLRYAELREEWETAFGPHRFSYKDLFHATKGFSDKNLLGTGGFGSVYRGVLRKPDMEVAVKRVSHESRQGMKEFVAEVASIGRLRHRNLVQLLGYCRRKGELLLLGHTGKATPSTDVFAFGAFLLEVTCGRRPIVQDEHGNRAVLVDWVTEQWSKGALVNVVDARIPSGFDPDEVSLVLKLGLLCSHPLPNARPTMRQVAQYLDGDMALPDLSPTYLSFTSLERILSNDVVVASAAGGDGQFTYQGFAAANLTVDGLATVTASGLLVLTNFTYQAKAHAFHPAPLRFLGESSTAAAGANASGGAGADVARSFSTAFVFAIVSGYDGLSDHGLAFVVAPTANLSAANAGQYLGFLNATNGTASGQILAVELDTIMNPEFHDISSNHVGIDANSLMSTQARPAGYYGDGDGAFRELRLNSRQPMQVWVDYDGQAKQLNVTLSPVQVPKPKKPLLSQAIDLSTVMAEEMYVGFSSATGVVNTHHYVLGWSFGFDGPAPPLDLSKLPRLPRFGPKPRSKVLDIVLPLATAFLVAAVLAAVFFVVRRRRRFAEVREDWEDEFGPHRFAYKDLFRATDGFKDRNLLGVGGFGRVYRGVLPESNLEIAVKRVSHDSRQGIREFVAEVVSIGRLRHRNLVQLLGYCRRKNELLLVTCGRRPIETDEHNKRVVLVDLVLEHHRNGSIVGAADPRLTGKFDVEEVALVLKLGLLCSHPLPGARPSMRNVMQYLERGGKSAPDLSPSYVSYSMMAIMQNEGFDSFIMSGGPRSATSIGTVSGASSMTIMSEGR

Function L-type lectin-domain containing receptor kinase SIT2 [UniProtKB/Swiss-Prot:Q7XUN6]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsGoSa_07g0020290 OsGoSa_07g0020290.01 Chr07 23962696 23975456 - NAM
CDS seq

atgcaactccacagcaaaacgatgctcgttgtgttcatcaatatcgtgttcatccactgccttagcgtgaacattggagcggcggtggccaaccctgcagccagcgatggccggttcgtccaccacggcttcacggcggaggacctcaccatggacggcctcgccgccgtcacgccgaccgggctcctcgcgctcaccaacgccacgtaccaaacgaaagcccacgcgttccaccctgcgcctctccgcttcctcaacacgtcgtcgtccgccgccgccaccgtgcggtccttctcgacgtcgttcgtgttcgccattgtgtccgacgaccccaggttcaggaacaacgtcgaccatgggctcgcgttcgtggtctccccgaccaagaacctctccacggcgaacgccggccagtacctgggcctcctcagcatggccgacgacggcaagccgagcaaccacgtgttcgccgtcgagctcgacatcatcacgaaccccgagttcggcgacatcgacagcaaccacgtcggcgtcgacgtcaatagcctcaggtcgctgcaggcgaagaccgccggctactatgtcgacggcgacggcgcgttccggagcctgcagctcaacagccagaagccaatgcaggtgtggGTGGactacgacggccaggccaagcagctcaacgtgacgctgtctcccgtgcaagtgcccaagcccaagaagcctctgctctcccaagccatcgacctctccacggtcatggccgaggagatgtacgtcggcttctcgtcggcgacgggcgtcgtgttcacgcaccactacgtcctcggatggagcttcagcttcgacggcggagctgctccctcactggacttctccatgctgcccaaggtgccacgagtgggtcctacacgtcggtcagtaatgctgtatgttgtgttgccgattgccagtgcactactgtttcttgttgcgtttgttctgggTgtcttcttcgtgagaaggtggcaccggcagtatgcggaggtgcgcgaagattgggaggttgagtttggtccgcatcggttcacatacaaggatctgtttcatgctacgcagggattcacagacaagaacctactcggtgcgggagggtttgggagcgtgtacaagggtgtgcttcccgtgtccaatacagagatagcggtgaaacaggtgtcacacaattcaagacaagggatgagagagtttattgctgaggtggtaagcatcggccgtatccgacaccggaacatcgtgcggctcctgggttactgtcggcgcaagggagaacttctccttgtttatgactacaagacaaatggtagtcttgacaagtgtttgcatgataatgctacatcaaccacactctgttggcccaagaggatccacatcatcaaaggtgttgcgtcggcattatcgtacctacacaaggattgggagcaagtagtgatccatcgagatgtcaaggcaagcaatgttcttctagacagcgagatgaatggactattaggggatttcggcttgtcaaggctacgggatcatggagccgatgcaaagaccacatacgtggtaggaactatgggttacattgccccagagctcatgcacacggggaaggcaacaccgttgacggacgtgttcgcgttcggtgtgttcctcctcgaggtcacctgtggacgaaggccgattggggaaagcgatagcaacgagattctattaatagattgggtgctgaagcattttcttagcggatccatccttaacgtggtggatccccggcttgcagggaggttcagcttcgaggaggtgaatcttgttttgaaactaggactaatgtgctcacatccattgcccaaggcaaggccaagcatggacaaagttgtgaagtacctcgatggtatgcttccagcaccagagctatcaccgacgcacatgagctataacatgatggagttgatgctacagaatggggttggttcacatagtttacccgtgtggtcctcttttgatgcaaacaccatgcttcgtgagcctttccactgtttcactctgctcctgctcctcctcgcggctgccgaccgctgcgccgcggccaccggcggcagcggcggcctgcagttcgcgtacgatggcttctcgggcgccaacctcaccctcgacggcgcggccacggtcacggcgagcggcctcctcatgctgaccaacgggtccatccagatgaaaggccacgcgttccacccgtcgccgctcccgctccgcgcggcgaggtccttctcgacgacgttcgtgttcgccatcttcgggcagtacgccgacttcagcagccacggcctggccttcttcgtctccgcgtccgcggacgcgttcgccgccgcgctgcctggccagttcctgggcctcttcaacggcaccggcgccaccaccggcaaccggagcgccgccggcgtcttcgccgtggagttcgacacgctcttcaacgccgagttccacgacctgaacagcaaccacgtcggcgtcgacgtcaacagcctgacgtcggtcaaggccgccgacgccggctactacgatgacgtcaccggccagttccggaacctgaccatgatcagccggaagcccatgcaggcgtgggtggactacgacggcgggagcacggaggtcaccgtggccatggctcccctgggcacggccaggcccaagaagccgctgctgcggaccaacgtcgacctctccgacgtcgcgacgggcgcggcgcacgtcgggttcgcgtcggcgacgggcatcctcttctcgcgccacttcgtgctaggctggagcttcgcggtggacgggccagccccgccgctgaacatctcgtcgctaccgccgttgccgcgggcttggcccaagccgcggtcgaaggtgctggagatcgtgctgcccatagcgtcggcggcgctggtcgccgccgtggccatggcggtgtacgccatggcgaggcggcggctcaggtacgccgagctgcgggaggagtgggagaccgcgtttgggccgcaccgattctcctacaaggacttgttccatgcgaccaagggattcagcgacaagaacctccttggcacgggagggttcgggagcgtgtaccgaggcgtgctccgcaagcccgacatggaggtcgcagtgaagagggtgtcacacgaatcgagacaagggatgaaggagttcgtcgcagaggtcgcgagcatcggtcgcttgcgacaccgcaacctcgtgcaactactcggctattgccgtcgtaaaggtgaacttctcttgttggggcacaccggcaaggcaaccccatcaaccgacgtgttcgcgttcggcgcattcctcctcgaggtcacctgcggaagaaggccaatcgtgcaggatgagcacggcaaccgtgccgtgcttgtggactgggtgactgagcagtggagcaagggtgcacttgttaacgtggtggacgcgaggattccgagcggttttgatcctgacgaggtttctctggttctaaaacttgggctgctctgctcgcatccattgcccaatgctaggccaacaatgcggcaggtcgctcagtacctcgacggtgatatggccctaccggatttgtcaccgacgtacctaagcttcacttcactagagcggatcttgagcaacgacgtggtggtggcctcggccgccggcggcgatggccagttcacgtaccaggggttcgcggcggcgaaccttaccgtggacggcctcgccaccgtcacggcgagcgggctcctcgtgctcaccaacttcacgtaccaggcgaaagcgcacgcgtttcacccggcgcctctccgcttcctcggcgagtcctccacggcggcggcgggggcgaacgccagcggtggcgccggagccgacgtggcgcggtccttctccacggctttcgtgttcgccatcgtgtccgggtacgacggcctgagcgaccacgggctcgcgttcgtggtcgcgccgacggcgaacctctcggcggcgaacgccgggcagtacctgggcttcctcaacgcgacgaacggcacggcgagcggccaaatcctggccgtcgagctggacaccatcatgaaccccgagttccacgacatcagcagcaaccacgtcggcatcgacgccaacagcctcatgtcgacgcaggcacggccggccggctactacggcgacggcgacggcgccttccgtgagctcaggctgaacagccgccagccgatgcaggtgtgggtggactacgacggccaggccaagcagctcaacgtgacgctgtctcccgtgcaagtgcctaagcccaagaagcctctgctctcccaggccatcgacctctccacggtcatggccgaggagatgtacgtcggcttctcgtcggcgacgggcgtcgtgaacacccaccactacgtgctcggctggagcttcggcttcgacgggccagctcctcccctcgatctctccaagcttccccggctgccacgcttcggtccgaagcctcggtccaaggtcctggacattgtgcttccgctggccaccgcatttctcgtcgctgcggtgctagctgccgtcttcttcgtcgtgcggcggcggcgccgcttcgccgaggtgcgggaagattgggaggatgagtttggcccgcaccggttcgcatacaaggatttgttccgcgcgacggatgggttcaaggatagaaatttgctgggtgttggagggtttgggagagtttacagaggggtgctaccggagtccaatttggagattgcggtgaagagggtttcacatgattcaaggcaaggtataagggagttcgtcgcggaagtggtgagcattggccgacttcgacatcggaatctcgtgcagttactaggctattgccgccgcaagaatgaactcctgttggtgacatgcgggcggaggccgatcgagaccgacgagcacaacaaacgggtggtgctagtcgacttggtgcttgagcaccaccgcaatggctcgatcgttggtgcggcggatccacggctcacggggaagttcgatgtggaggaggtggccctcgttctgaagctgggtttgttgtgttcgcacccgctacccggtgcgaggcccagcatgcggaatgtcatgcaatacctggagcgtggcggtaagtcggctcctgacctatcgccgagctacgtgagctatagcatgatggcgataatgcaaaacgaagggttcgattcattcatcatgtcgggcggcccccggtcggcgacaagcattggcaccgtgtctggtgcatcatctatgactattatgtcggagggaagataa

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Protein seq

MQLHSKTMLVVFINIVFIHCLSVNIGAAVANPAASDGRFVHHGFTAEDLTMDGLAAVTPTGLLALTNATYQTKAHAFHPAPLRFLNTSSSAAATVRSFSTSFVFAIVSDDPRFRNNVDHGLAFVVSPTKNLSTANAGQYLGLLSMADDGKPSNHVFAVELDIITNPEFGDIDSNHVGVDVNSLRSLQAKTAGYYVDGDGAFRSLQLNSQKPMQVWVDYDGQAKQLNVTLSPVQVPKPKKPLLSQAIDLSTVMAEEMYVGFSSATGVVFTHHYVLGWSFSFDGGAAPSLDFSMLPKVPRVGPTRRSVMLYVVLPIASALLFLVAFVLGVFFVRRWHRQYAEVREDWEVEFGPHRFTYKDLFHATQGFTDKNLLGAGGFGSVYKGVLPVSNTEIAVKQVSHNSRQGMREFIAEVVSIGRIRHRNIVRLLGYCRRKGELLLVYDYKTNGSLDKCLHDNATSTTLCWPKRIHIIKGVASALSYLHKDWEQVVIHRDVKASNVLLDSEMNGLLGDFGLSRLRDHGADAKTTYVVGTMGYIAPELMHTGKATPLTDVFAFGVFLLEVTCGRRPIGESDSNEILLIDWVLKHFLSGSILNVVDPRLAGRFSFEEVNLVLKLGLMCSHPLPKARPSMDKVVKYLDGMLPAPELSPTHMSYNMMELMLQNGVGSHSLPVWSSFDANTMLREPFHCFTLLLLLLAAADRCAAATGGSGGLQFAYDGFSGANLTLDGAATVTASGLLMLTNGSIQMKGHAFHPSPLPLRAARSFSTTFVFAIFGQYADFSSHGLAFFVSASADAFAAALPGQFLGLFNGTGATTGNRSAAGVFAVEFDTLFNAEFHDLNSNHVGVDVNSLTSVKAADAGYYDDVTGQFRNLTMISRKPMQAWVDYDGGSTEVTVAMAPLGTARPKKPLLRTNVDLSDVATGAAHVGFASATGILFSRHFVLGWSFAVDGPAPPLNISSLPPLPRAWPKPRSKVLEIVLPIASAALVAAVAMAVYAMARRRLRYAELREEWETAFGPHRFSYKDLFHATKGFSDKNLLGTGGFGSVYRGVLRKPDMEVAVKRVSHESRQGMKEFVAEVASIGRLRHRNLVQLLGYCRRKGELLLLGHTGKATPSTDVFAFGAFLLEVTCGRRPIVQDEHGNRAVLVDWVTEQWSKGALVNVVDARIPSGFDPDEVSLVLKLGLLCSHPLPNARPTMRQVAQYLDGDMALPDLSPTYLSFTSLERILSNDVVVASAAGGDGQFTYQGFAAANLTVDGLATVTASGLLVLTNFTYQAKAHAFHPAPLRFLGESSTAAAGANASGGAGADVARSFSTAFVFAIVSGYDGLSDHGLAFVVAPTANLSAANAGQYLGFLNATNGTASGQILAVELDTIMNPEFHDISSNHVGIDANSLMSTQARPAGYYGDGDGAFRELRLNSRQPMQVWVDYDGQAKQLNVTLSPVQVPKPKKPLLSQAIDLSTVMAEEMYVGFSSATGVVNTHHYVLGWSFGFDGPAPPLDLSKLPRLPRFGPKPRSKVLDIVLPLATAFLVAAVLAAVFFVVRRRRRFAEVREDWEDEFGPHRFAYKDLFRATDGFKDRNLLGVGGFGRVYRGVLPESNLEIAVKRVSHDSRQGIREFVAEVVSIGRLRHRNLVQLLGYCRRKNELLLVTCGRRPIETDEHNKRVVLVDLVLEHHRNGSIVGAADPRLTGKFDVEEVALVLKLGLLCSHPLPGARPSMRNVMQYLERGGKSAPDLSPSYVSYSMMAIMQNEGFDSFIMSGGPRSATSIGTVSGASSMTIMSEGR

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.640751 0.951779 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_07g0575750 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os07g38800 RBH 1.159380 1.592450 0.523064
Nipponbare | IRGSP 1.0 | RAP-db Os07g0575600 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_07g0001860 SBH 0.794274 0.468260 0.961358
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_07g0001860 SBH 0.230921 0.095846 1.286250
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_07g0020480 SBH 0.118191 0.528161 1.504797
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_07g0001790 SBH 0.008926 0.007383 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_07g0001800 SBH 6.989861 2.384900 3.853860
Minghui 63 | MH63RS3 | HZAU OsMH63_07G0380700 RBH 0 0.0053645 0.0191415
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_07g0020880 RBH 0.077602 0.166119 0.235651
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_07G0393500 RBH 0.641759 0.718219 0.4429815
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_07g0020240 RBH 0.041024 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_07g0001860 SBH 0.094928 0.222106 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_07g0001830 SBH 0.200830 0.857629 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_07g0001940 SBH 0.689459 0.049129 0.446399
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_07g0001830 RBH 0.020082 0.236248 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_07G001860 SBH 0.719089 0.114321 0.484302
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_07g0020180 RBH 0.000000 0.706915 0.527977
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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