Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_02g0009530 | OGI:02021150 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr02:7258649-7260372 | ||||||||
| Gene Symbol | RLCK70, OsRLCK70 | ||||||||||
| DNA seq | atggttgtctacagcatcctcatcctctttctactactattgatcttctccatctccaactcccaatcggcggcgcagcccagcgccgacgagcaaacactactcctagcaatcaagcaagattgggacaacccagctccactcagttcatggagcagcaccggcaactggactggtgttatctacaacaatatcacaggtcaggtcactggcctctccttgccaagtttccatatagccagaccaaacccaccctccgtttgtagactcaagaacctaacctacatagacctctctttcaacaatctcaccggtgatttccccacggtgctctacggttgctcagctttggagttccttgacctatccaacaatcaattatccggcaaacttccggaccgcattgacaggctatcgttggggatgcaacacctcaacctgtccagcaatgctttcaccggcgatgtgccgttggctattggaaggttctcgaagctcaagtcattggtacttgacactaacagcttcaatgggaactacccgggtgccgccattggaggccttttggagcttgagacgctgacgctggcgaaaaacccgtttgagccgggtccagtcccaaaagagtttggcaatctcacaaagctgaagttgttgtggttatcatgtatgaacatgactgggaccatccctgatgatctatcgtcactgacagagctcacactgctggacttgtcacaaaataagatgcagggacaaattcccgagtgggtattgaagcaccagaaactcgagaatctatatctctatgcaagcaatttgagtggcgagattggtcctaacatcacagctctcaacctgcaggagcttgatctgtccatgaacaagttctctggatcaataccagaggacattgcaaacctgaagaagttgagattactatttttgtactacaacaatctcactggacccatcccggctggtgttggtatgatgccgaacctcactgacatccgtctcttcaataacaagctctctgggcccctacccgcggagcttggaaagcattcggaattggggaattttgaggtgtccaacaacaacctctctggtgagctgccggatacactttgcttcaataagaagctctttgacattgtggtgttcaacaatagcttctccggcgtgttcccgacgaaccttggggattgcaaaaccatcaacaacatcatggcatacaacaaccactttgttggggactttcccaagaagatatggtcattcgagttgctcaccaatgtcatgatttacaacaacttcaccggcactctacctagtgagatatcatttaacatcttaaggattgagatggggaacaatcgcttctccggtgccctcccgtcggccgccgtcggtctgaagagtttcacggcggagaacaaccagttctccggtgaactgccaactgacatgtctaggctcgccaacctcaccatgttgaacctcgccggcaaccagttgctcaccactgtcaagatttatattaacaacttcgccagcactctaccaagtaataagattgttagtaagtcaaatgtaaaagagattggtttacagtcacaagggaaaatgggttttgcccattgcgataacggccgattgcaacgaaattggccatgctaaaaacaaacttaaaaaaaaataacagtatccaccttaaaagc
More
|
||||||||||
| CDS seq | atggttgtctacagcatcctcatcctctttctactactattgatcttctccatctccaactcccaatcggcggcgcagcccagcgccgacgagcaaacactactcctagcaatcaagcaagattgggacaacccagctccactcagttcatggagcagcaccggcaactggactggtgttatctacaacaatatcacaggtcaggtcactggcctctccttgccaagtttccatatagccagaccaaacccaccctccgtttgtagactcaagaacctaacctacatagacctctctttcaacaatctcaccggtgatttccccacggtgctctacggttgctcagctttggagttccttgacctatccaacaatcaattatccggcaaacttccggaccgcattgacaggctatcgttggggatgcaacacctcaacctgtccagcaatgctttcaccggcgatgtgccgttggctattggaaggttctcgaagctcaagtcattggtacttgacactaacagcttcaatgggaactacccgggtgccgccattggaggccttttggagcttgagacgctgacgctggcgaaaaacccgtttgagccgggtccagtcccaaaagagtttggcaatctcacaaagctgaagttgttgtggttatcatgtatgaacatgactgggaccatccctgatgatctatcgtcactgacagagctcacactgctggacttgtcacaaaataagatgcagggacaaattcccgagtgggtattgaagcaccagaaactcgagaatctatatctctatgcaagcaatttgagtggcgagattggtcctaacatcacagctctcaacctgcaggagcttgatctgtccatgaacaagttctctggatcaataccagaggacattgcaaacctgaagaagttgagattactatttttgtactacaacaatctcactggacccatcccggctggtgttggtatgatgccgaacctcactgacatccgtctcttcaataacaagctctctgggcccctacccgcggagcttggaaagcattcggaattggggaattttgaggtgtccaacaacaacctctctggtgagctgccggatacactttgcttcaataagaagctctttgacattgtggtgttcaacaatagcttctccggcgtgttcccgacgaaccttggggattgcaaaaccatcaacaacatcatggcatacaacaaccactttgttggggactttcccaagaagatatggtcattcgagttgctcaccaatgtcatgatttacaacaacttcaccggcactctacctagtgagatatcatttaacatcttaaggattgagatggggaacaatcgcttctccggtgccctcccgtcggccgccgtcggtctgaagagtttcacggcggagaacaaccagttctccggtgaactgccaactgacatgtctaggctcgccaacctcaccatgttgaacctcgccggcaaccagttgctcaccactgtcaagatttatattaacaacttcgccagcactctaccaagtaataagattgttagtaagtcaaatgtaaaagagattggtttacagtcacaagggaaaatgggttttgcccattgcgataacggccgattgcaacgaaattggccatgctaa
More
|
||||||||||
| Protein seq | MVVYSILILFLLLLIFSISNSQSAAQPSADEQTLLLAIKQDWDNPAPLSSWSSTGNWTGVIYNNITGQVTGLSLPSFHIARPNPPSVCRLKNLTYIDLSFNNLTGDFPTVLYGCSALEFLDLSNNQLSGKLPDRIDRLSLGMQHLNLSSNAFTGDVPLAIGRFSKLKSLVLDTNSFNGNYPGAAIGGLLELETLTLAKNPFEPGPVPKEFGNLTKLKLLWLSCMNMTGTIPDDLSSLTELTLLDLSQNKMQGQIPEWVLKHQKLENLYLYASNLSGEIGPNITALNLQELDLSMNKFSGSIPEDIANLKKLRLLFLYYNNLTGPIPAGVGMMPNLTDIRLFNNKLSGPLPAELGKHSELGNFEVSNNNLSGELPDTLCFNKKLFDIVVFNNSFSGVFPTNLGDCKTINNIMAYNNHFVGDFPKKIWSFELLTNVMIYNNFTGTLPSEISFNILRIEMGNNRFSGALPSAAVGLKSFTAENNQFSGELPTDMSRLANLTMLNLAGNQLLTTVKIYINNFASTLPSNKIVSKSNVKEIGLQSQGKMGFAHCDNGRLQRNWPC |
||||||||||
| Function | Receptor-like protein 52 [UniProtKB/Swiss-Prot:Q7FZR1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0009530 | OsCMeo_02g0009530.01 | Chr02 | 7258649 | 7260372 | + | NAM | ||
| CDS seq | atggttgtctacagcatcctcatcctctttctactactattgatcttctccatctccaactcccaatcggcggcgcagcccagcgccgacgagcaaacactactcctagcaatcaagcaagattgggacaacccagctccactcagttcatggagcagcaccggcaactggactggtgttatctacaacaatatcacaggtcaggtcactggcctctccttgccaagtttccatatagccagaccaaacccaccctccgtttgtagactcaagaacctaacctacatagacctctctttcaacaatctcaccggtgatttccccacggtgctctacggttgctcagctttggagttccttgacctatccaacaatcaattatccggcaaacttccggaccgcattgacaggctatcgttggggatgcaacacctcaacctgtccagcaatgctttcaccggcgatgtgccgttggctattggaaggttctcgaagctcaagtcattggtacttgacactaacagcttcaatgggaactacccgggtgccgccattggaggccttttggagcttgagacgctgacgctggcgaaaaacccgtttgagccgggtccagtcccaaaagagtttggcaatctcacaaagctgaagttgttgtggttatcatgtatgaacatgactgggaccatccctgatgatctatcgtcactgacagagctcacactgctggacttgtcacaaaataagatgcagggacaaattcccgagtgggtattgaagcaccagaaactcgagaatctatatctctatgcaagcaatttgagtggcgagattggtcctaacatcacagctctcaacctgcaggagcttgatctgtccatgaacaagttctctggatcaataccagaggacattgcaaacctgaagaagttgagattactatttttgtactacaacaatctcactggacccatcccggctggtgttggtatgatgccgaacctcactgacatccgtctcttcaataacaagctctctgggcccctacccgcggagcttggaaagcattcggaattggggaattttgaggtgtccaacaacaacctctctggtgagctgccggatacactttgcttcaataagaagctctttgacattgtggtgttcaacaatagcttctccggcgtgttcccgacgaaccttggggattgcaaaaccatcaacaacatcatggcatacaacaaccactttgttggggactttcccaagaagatatggtcattcgagttgctcaccaatgtcatgatttacaacaacttcaccggcactctacctagtgagatatcatttaacatcttaaggattgagatggggaacaatcgcttctccggtgccctcccgtcggccgccgtcggtctgaagagtttcacggcggagaacaaccagttctccggtgaactgccaactgacatgtctaggctcgccaacctcaccatgttgaacctcgccggcaaccagttgctcaccactgtcaagatttatattaacaacttcgccagcactctaccaagtaataagattgttagtaagtcaaatgtaaaagagattggtttacagtcacaagggaaaatgggttttgcccattgcgataacggccgattgcaacgaaattggccatgctaa
More
|
|||||||
| Protein seq | MVVYSILILFLLLLIFSISNSQSAAQPSADEQTLLLAIKQDWDNPAPLSSWSSTGNWTGVIYNNITGQVTGLSLPSFHIARPNPPSVCRLKNLTYIDLSFNNLTGDFPTVLYGCSALEFLDLSNNQLSGKLPDRIDRLSLGMQHLNLSSNAFTGDVPLAIGRFSKLKSLVLDTNSFNGNYPGAAIGGLLELETLTLAKNPFEPGPVPKEFGNLTKLKLLWLSCMNMTGTIPDDLSSLTELTLLDLSQNKMQGQIPEWVLKHQKLENLYLYASNLSGEIGPNITALNLQELDLSMNKFSGSIPEDIANLKKLRLLFLYYNNLTGPIPAGVGMMPNLTDIRLFNNKLSGPLPAELGKHSELGNFEVSNNNLSGELPDTLCFNKKLFDIVVFNNSFSGVFPTNLGDCKTINNIMAYNNHFVGDFPKKIWSFELLTNVMIYNNFTGTLPSEISFNILRIEMGNNRFSGALPSAAVGLKSFTAENNQFSGELPTDMSRLANLTMLNLAGNQLLTTVKIYINNFASTLPSNKIVSKSNVKEIGLQSQGKMGFAHCDNGRLQRNWPC
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.095448 | 1.284628 | 0.192024 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0227600 | RBH | 0.000000 | 0.0 | 0.394133 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g13420 | RBH | 0.000000 | 0.0 | 0.125496 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0227600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0009580 | RBH | 0.0 | 1.875847 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0009660 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0019410 | SBH | 0.616311 | 12.548592 | 3.171643 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0009410 | SBH | 1.304985 | 0.151174 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0009560 | SBH | 30.706505 | 14.294057 | 48.083878 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0121400 | SBH | 17.00068 | 17.508032 | 0.948289 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0009360 | SBH | 0.790263 | 0.433688 | 1.495910 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0124600 | SBH | 34.9371965 | 16.9308355 | 0.1263695 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0009750 | RBH | 0.049210 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0003980 | SBH | 0.070042 | 4.234505 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0009720 | RBH | 5.951255 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0009730 | RBH | 0.000000 | 0.0 | 0.040252 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0009440 | RBH | 0.114589 | 0.779904 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G009650 | RBH | 0.0 | 0.0 | 0.194379 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0004260 | SBH | 0.000000 | 0.353235 | 0.384476 |
