Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLiXu_02g0009730 OGI:02021150 | 16/16 LIU XU | Os125827RS1 | Gramene(+IsoSeq) Chr02:7406092-7410015
Gene Symbol -
DNA seq

atggctgtctacaacatcctcatcctctttctactactattgctcttctctctatcggcggcgcagcccagcgccaacgagcaaaaactactcctagcaatcaagcaagattgggacaacccagctccactcagttcatggagcagcaccggcaactggactggtgttatctacaacaatatcacaggtcaggtcactggcctctccttgccaagtttccatatagccagaccaatcccaccctccgtttgtagactcaagaacctaacctacatagacctctctttcaacaatctcatcggtgatttccccacggtgctctacggttgctcagctttggagttccttgacctatccaacaatcaattatctggcatacttcccgatgacatcgacaagctgtcatcggggatgcaacacctcaacctgtccagcaatgctttcaccggcgatgtgccgtcggctattgcaaggttctcgaagctcaagtcattggtccttgacactaatagattcaatgggaattacccgggtgccgccattggaggccttgtggagcttgagacgctgacgttggcatccaacccattcgagccgggtccagtcccaaaggagtttggcaagctgacaaagctgaagatgctgtggctgtcatggatgaaccttactgggaccatccctgatgatctgtcgtcattgacggagctcacattgttggacttgtcacaaaataagatgcagggacaaatccccgagtgggtattgaagcaccagaagctcgagaatctatatctctatgcaagcaatttgagtggcgagattggtcctaacatcacagctctcaacctgcaggagcttgatctgtccatgaacaagttctctggatcaataccagaggacattgcaaacttgaagaagttgagattattatatttgtactacaacaatctcactggacccatcccggctggtgttggtatgatgccggacctcaccgacatccgtctcttcaataacaagctctctgggcccctacccgcggagcttggaaaacattcagaattggggaattttgaggtgtccaacaacaacctctctggtgagctaccggatacactttgcttcaataagaagctctttgacattgtggtgttcaacaatagcttctccggcgtgttcccgacgaaccttggggattgcaaaaccatcaacaacatcatggcatacaacaatcactttgttggggactttcccaagaagatatggtcattcgagttgctcaccaatgtcatgatttacaacaacaacttcaccggcactctacccagtgagatatcatttaacatctcgaggattgagatggagaacaatcgcttctccggtgccctcccgtcgaccgccgtcggtctgaagagtttcacggcggagaacaaccagttctccggtgaactgccagctgacatgtctaggcttgccaacctcaccgagttgaacctcgccggcaaccagttatccggctcgattccgccgtctatcaaatcattgacaagtctgacctccctcaaccttagcagaaaccagatttccggtgagatccctgccgcagtcgggtggatgggcctctacattcttgacctctccgacaacgggctcaccggcgacatacctcaagatttcagcaatctccatctcaactttctcaacctttcttctaaccagctctccggcgaggtcccggagacgctgcaaaacggcgcctactatcgtagcttcctcggcaaccatggcctctgtgccacggtgaacacgaacatgaaccttccggcttgcccccaccaaagccacaacaaatcgtcgacgaacctgatcatcgtcttctcggtgctcaccggcgtcgtgttcatcggcgccgtcgccatctggttgctgatcatccgacaccagaagcgtcagcaagacctcgccgggtggaagatgacgccgttccgtaccctgcacttctccgagtgcgacgtgctcggcaatctccacgaggagaacgtgatcggtagcggcggctccggcaaggtgtaccgcatcaacatcggcggcaagggcagcgccggcatggtggtggcggtgaagcggctatggcggacggcggccaagtcggacgcgaagagcgacaaggagttcgacgccgaggtgaggatcctcggggaggtacgccacatcaacatcatcgacctcctctgctgcatctccggcgacgacaccaagctgctcgtctacgagtacatggagaacggcagcctcgaccggtggctgcaccgccgcgacgacggcgtgccggtgccgctccagtggccgacgcggctgtgcgtcgccatcgacgcggcgagggggctctgctacatgcaccacgagtgcgtgcagccgatcatgcaccgcgacgtcaagtccagcaacatcctgctcgacccgggcttccgcgcaaagatcgccgacttcggcctcgccaggatcctcgtcaagtccggcgagccgaattccgtctccgccatcagcggcaccttcggctacatggctccaggtgagttcatcacaaaattattcttcaattgttcgtttggtttgctcgcgatcgagctcatgagagtgttcgacgatatgtctgtctcgcggtcgcagagtacgggtgcagagcgaaggcgaacgagaaggtggatgtgtacgccttcggcatcgtgctactggagctgacgactggccaggcggcgaccgacgacgactactgcaacctggtggattgggcgtggcggtggtacaaggccagcggcgcgctgcacctgcacgatgtcatcgacatgaggatcccggacagagcggccttcctggaggacgccgtggcggtgttcctgctcggggtgagctgcatccgcgacgacccggcgtcgcggccgacgatgaaggaggtgctcgagcagctggtccagtacgaccgcacgtccagcgtggccaccgcgtccgacgggaagagctcgccggcgggaaccggagattgagctgttccggcaaggcaatgaggatagttgcttcctggcttcctggcgcatcccgtttaaagctgatggtcgccgtgcatgagtcgctagctgtagattatgaagtaacgtttgttgctgtagtgaaacaatctttgtacccagaagaggacaaacaaatttggtatagactgtttaggttctggatttgtgcttcacaattcaaataaagcaacgcggattacattcggaattggggaattttgaggttcccaacaacaacctttggtgagctgccagatacactttgcttcaataagaagctctttgatattgtggtgttcaacaatagcttctccggcgtgttcccgacgaaccttggggattggaaaaccatcaacaacgtcatggcatacaacaaccactttgttggggactttcccaagaagatatggtcattcgagttgctcaccaatgtcatgatttacaacaacttcaccggcactctacctagtgagatatcatttaacatcttaaggattgagatggggaacaatcgcttctccggtgccctcccgtcggccgccgtcggtctgaagagtttcttggcggagaacaatcagttctccggtgaactgccaactgacatgtctaggctcgccaacctcaccaagttgaacctcgccggcaaccagttgctcaccattgtcaagatttatattaacaacttcgccagcactctaccaagtaataagattgttagtaaatcaaatgtaaaagagattggtttacagtcacaagggaaaatgggttttgcacattgcgataacggccgattgcaacgaaattggccatgctaaaaacaaacttaaaaaaaaaaaacagtatccaccttaaaagc

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CDS seq

atggctgtctacaacatcctcatcctctttctactactattgctcttctctctatcggcggcgcagcccagcgccaacgagcaaaaactactcctagcaatcaagcaagattgggacaacccagctccactcagttcatggagcagcaccggcaactggactggtgttatctacaacaatatcacaggtcaggtcactggcctctccttgccaagtttccatatagccagaccaatcccaccctccgtttgtagactcaagaacctaacctacatagacctctctttcaacaatctcatcggtgatttccccacggtgctctacggttgctcagctttggagttccttgacctatccaacaatcaattatctggcatacttcccgatgacatcgacaagctgtcatcggggatgcaacacctcaacctgtccagcaatgctttcaccggcgatgtgccgtcggctattgcaaggttctcgaagctcaagtcattggtccttgacactaatagattcaatgggaattacccgggtgccgccattggaggccttgtggagcttgagacgctgacgttggcatccaacccattcgagccgggtccagtcccaaaggagtttggcaagctgacaaagctgaagatgctgtggctgtcatggatgaaccttactgggaccatccctgatgatctgtcgtcattgacggagctcacattgttggacttgtcacaaaataagatgcagggacaaatccccgagtgggtattgaagcaccagaagctcgagaatctatatctctatgcaagcaatttgagtggcgagattggtcctaacatcacagctctcaacctgcaggagcttgatctgtccatgaacaagttctctggatcaataccagaggacattgcaaacttgaagaagttgagattattatatttgtactacaacaatctcactggacccatcccggctggtgttggtatgatgccggacctcaccgacatccgtctcttcaataacaagctctctgggcccctacccgcggagcttggaaaacattcagaattggggaattttgaggtgtccaacaacaacctctctggtgagctaccggatacactttgcttcaataagaagctctttgacattgtggtgttcaacaatagcttctccggcgtgttcccgacgaaccttggggattgcaaaaccatcaacaacatcatggcatacaacaatcactttgttggggactttcccaagaagatatggtcattcgagttgctcaccaatgtcatgatttacaacaacaacttcaccggcactctacccagtgagatatcatttaacatctcgaggattgagatggagaacaatcgcttctccggtgccctcccgtcgaccgccgtcggtctgaagagtttcacggcggagaacaaccagttctccggtgaactgccagctgacatgtctaggcttgccaacctcaccgagttgaacctcgccggcaaccagttatccggctcgattccgccgtctatcaaatcattgacaagtctgacctccctcaaccttagcagaaaccagatttccggtgagatccctgccgcagtcgggtggatgggcctctacattcttgacctctccgacaacgggctcaccggcgacatacctcaagatttcagcaatctccatctcaactttctcaacctttcttctaaccagctctccggcgaggtcccggagacgctgcaaaacggcgcctactatcgtagcttcctcggcaaccatggcctctgtgccacggtgaacacgaacatgaaccttccggcttgcccccaccaaagccacaacaaatcgtcgacgaacctgatcatcgtcttctcggtgctcaccggcgtcgtgttcatcggcgccgtcgccatctggttgctgatcatccgacaccagaagcgtcagcaagacctcgccgggtggaagatgacgccgttccgtaccctgcacttctccgagtgcgacgtgctcggcaatctccacgaggagaacgtgatcggtagcggcggctccggcaaggtgtaccgcatcaacatcggcggcaagggcagcgccggcatggtggtggcggtgaagcggctatggcggacggcggccaagtcggacgcgaagagcgacaaggagttcgacgccgaggtgaggatcctcggggaggtacgccacatcaacatcatcgacctcctctgctgcatctccggcgacgacaccaagctgctcgtctacgagtacatggagaacggcagcctcgaccggtggctgcaccgccgcgacgacggcgtgccgtacgggtgcagagcgaaggcgaacgagaaggtggatgtgtacgccttcggcatcgtgctactggagctgacgactggccaggcggcgaccgacgacgactactgcaacctggtggattgggcgtggcggtggtacaaggccagcggcgcgctgcacctgcacgatgtcatcgacatgaggatcccggacagagcggccttcctggaggacgccgtggcggtgttcctgctcggggtgagctgcatccgcgacgacccggcgtcgcggccgacgatgaaggaggtgctcgagcagctggtccacaacgcggattacattcggaattggggaattttgaggttcccaacaacaacctttggtgagctgccagatacactttgcttcaataagaagctctttgatattgtggtgttcaacaatagcttctccggcgtgttcccgacgaaccttggggattggaaaaccatcaacaacgtcatggcatacaacaaccactttgttggggactttcccaagaagatatggtcattcgagttgctcaccaatgtcatgatttacaacaacttcaccggcactctacctagtgagatatcatttaacatcttaaggattgagatggggaacaatcgcttctccggtgccctcccgtcggccgccgtcggtctgaagagtttcttggcggagaacaatcagttctccggtgaactgccaactgacatgtctaggctcgccaacctcaccaagttgaacctcgccggcaaccagttgctcaccattgtcaagatttatattaacaacttcgccagcactctaccaagtaataagattgttagtaaatcaaatgtaaaagagattggtttacagtcacaagggaaaatgggttttgcacattgcgataacggccgattgcaacgaaattggccatgctaa

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Protein seq

MAVYNILILFLLLLLFSLSAAQPSANEQKLLLAIKQDWDNPAPLSSWSSTGNWTGVIYNNITGQVTGLSLPSFHIARPIPPSVCRLKNLTYIDLSFNNLIGDFPTVLYGCSALEFLDLSNNQLSGILPDDIDKLSSGMQHLNLSSNAFTGDVPSAIARFSKLKSLVLDTNRFNGNYPGAAIGGLVELETLTLASNPFEPGPVPKEFGKLTKLKMLWLSWMNLTGTIPDDLSSLTELTLLDLSQNKMQGQIPEWVLKHQKLENLYLYASNLSGEIGPNITALNLQELDLSMNKFSGSIPEDIANLKKLRLLYLYYNNLTGPIPAGVGMMPDLTDIRLFNNKLSGPLPAELGKHSELGNFEVSNNNLSGELPDTLCFNKKLFDIVVFNNSFSGVFPTNLGDCKTINNIMAYNNHFVGDFPKKIWSFELLTNVMIYNNNFTGTLPSEISFNISRIEMENNRFSGALPSTAVGLKSFTAENNQFSGELPADMSRLANLTELNLAGNQLSGSIPPSIKSLTSLTSLNLSRNQISGEIPAAVGWMGLYILDLSDNGLTGDIPQDFSNLHLNFLNLSSNQLSGEVPETLQNGAYYRSFLGNHGLCATVNTNMNLPACPHQSHNKSSTNLIIVFSVLTGVVFIGAVAIWLLIIRHQKRQQDLAGWKMTPFRTLHFSECDVLGNLHEENVIGSGGSGKVYRINIGGKGSAGMVVAVKRLWRTAAKSDAKSDKEFDAEVRILGEVRHINIIDLLCCISGDDTKLLVYEYMENGSLDRWLHRRDDGVPYGCRAKANEKVDVYAFGIVLLELTTGQAATDDDYCNLVDWAWRWYKASGALHLHDVIDMRIPDRAAFLEDAVAVFLLGVSCIRDDPASRPTMKEVLEQLVHNADYIRNWGILRFPTTTFGELPDTLCFNKKLFDIVVFNNSFSGVFPTNLGDWKTINNVMAYNNHFVGDFPKKIWSFELLTNVMIYNNFTGTLPSEISFNILRIEMGNNRFSGALPSAAVGLKSFLAENNQFSGELPTDMSRLANLTKLNLAGNQLLTIVKIYINNFASTLPSNKIVSKSNVKEIGLQSQGKMGFAHCDNGRLQRNWPC

Function Receptor-like protein kinase HSL1 [UniProtKB/Swiss-Prot:Q9SGP2]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLiXu_02g0009730 OsLiXu_02g0009730.01 Chr02 7406092 7410015 + NAM
CDS seq

atggctgtctacaacatcctcatcctctttctactactattgctcttctctctatcggcggcgcagcccagcgccaacgagcaaaaactactcctagcaatcaagcaagattgggacaacccagctccactcagttcatggagcagcaccggcaactggactggtgttatctacaacaatatcacaggtcaggtcactggcctctccttgccaagtttccatatagccagaccaatcccaccctccgtttgtagactcaagaacctaacctacatagacctctctttcaacaatctcatcggtgatttccccacggtgctctacggttgctcagctttggagttccttgacctatccaacaatcaattatctggcatacttcccgatgacatcgacaagctgtcatcggggatgcaacacctcaacctgtccagcaatgctttcaccggcgatgtgccgtcggctattgcaaggttctcgaagctcaagtcattggtccttgacactaatagattcaatgggaattacccgggtgccgccattggaggccttgtggagcttgagacgctgacgttggcatccaacccattcgagccgggtccagtcccaaaggagtttggcaagctgacaaagctgaagatgctgtggctgtcatggatgaaccttactgggaccatccctgatgatctgtcgtcattgacggagctcacattgttggacttgtcacaaaataagatgcagggacaaatccccgagtgggtattgaagcaccagaagctcgagaatctatatctctatgcaagcaatttgagtggcgagattggtcctaacatcacagctctcaacctgcaggagcttgatctgtccatgaacaagttctctggatcaataccagaggacattgcaaacttgaagaagttgagattattatatttgtactacaacaatctcactggacccatcccggctggtgttggtatgatgccggacctcaccgacatccgtctcttcaataacaagctctctgggcccctacccgcggagcttggaaaacattcagaattggggaattttgaggtgtccaacaacaacctctctggtgagctaccggatacactttgcttcaataagaagctctttgacattgtggtgttcaacaatagcttctccggcgtgttcccgacgaaccttggggattgcaaaaccatcaacaacatcatggcatacaacaatcactttgttggggactttcccaagaagatatggtcattcgagttgctcaccaatgtcatgatttacaacaacaacttcaccggcactctacccagtgagatatcatttaacatctcgaggattgagatggagaacaatcgcttctccggtgccctcccgtcgaccgccgtcggtctgaagagtttcacggcggagaacaaccagttctccggtgaactgccagctgacatgtctaggcttgccaacctcaccgagttgaacctcgccggcaaccagttatccggctcgattccgccgtctatcaaatcattgacaagtctgacctccctcaaccttagcagaaaccagatttccggtgagatccctgccgcagtcgggtggatgggcctctacattcttgacctctccgacaacgggctcaccggcgacatacctcaagatttcagcaatctccatctcaactttctcaacctttcttctaaccagctctccggcgaggtcccggagacgctgcaaaacggcgcctactatcgtagcttcctcggcaaccatggcctctgtgccacggtgaacacgaacatgaaccttccggcttgcccccaccaaagccacaacaaatcgtcgacgaacctgatcatcgtcttctcggtgctcaccggcgtcgtgttcatcggcgccgtcgccatctggttgctgatcatccgacaccagaagcgtcagcaagacctcgccgggtggaagatgacgccgttccgtaccctgcacttctccgagtgcgacgtgctcggcaatctccacgaggagaacgtgatcggtagcggcggctccggcaaggtgtaccgcatcaacatcggcggcaagggcagcgccggcatggtggtggcggtgaagcggctatggcggacggcggccaagtcggacgcgaagagcgacaaggagttcgacgccgaggtgaggatcctcggggaggtacgccacatcaacatcatcgacctcctctgctgcatctccggcgacgacaccaagctgctcgtctacgagtacatggagaacggcagcctcgaccggtggctgcaccgccgcgacgacggcgtgccgtacgggtgcagagcgaaggcgaacgagaaggtggatgtgtacgccttcggcatcgtgctactggagctgacgactggccaggcggcgaccgacgacgactactgcaacctggtggattgggcgtggcggtggtacaaggccagcggcgcgctgcacctgcacgatgtcatcgacatgaggatcccggacagagcggccttcctggaggacgccgtggcggtgttcctgctcggggtgagctgcatccgcgacgacccggcgtcgcggccgacgatgaaggaggtgctcgagcagctggtccacaacgcggattacattcggaattggggaattttgaggttcccaacaacaacctttggtgagctgccagatacactttgcttcaataagaagctctttgatattgtggtgttcaacaatagcttctccggcgtgttcccgacgaaccttggggattggaaaaccatcaacaacgtcatggcatacaacaaccactttgttggggactttcccaagaagatatggtcattcgagttgctcaccaatgtcatgatttacaacaacttcaccggcactctacctagtgagatatcatttaacatcttaaggattgagatggggaacaatcgcttctccggtgccctcccgtcggccgccgtcggtctgaagagtttcttggcggagaacaatcagttctccggtgaactgccaactgacatgtctaggctcgccaacctcaccaagttgaacctcgccggcaaccagttgctcaccattgtcaagatttatattaacaacttcgccagcactctaccaagtaataagattgttagtaaatcaaatgtaaaagagattggtttacagtcacaagggaaaatgggttttgcacattgcgataacggccgattgcaacgaaattggccatgctaa

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Protein seq

MAVYNILILFLLLLLFSLSAAQPSANEQKLLLAIKQDWDNPAPLSSWSSTGNWTGVIYNNITGQVTGLSLPSFHIARPIPPSVCRLKNLTYIDLSFNNLIGDFPTVLYGCSALEFLDLSNNQLSGILPDDIDKLSSGMQHLNLSSNAFTGDVPSAIARFSKLKSLVLDTNRFNGNYPGAAIGGLVELETLTLASNPFEPGPVPKEFGKLTKLKMLWLSWMNLTGTIPDDLSSLTELTLLDLSQNKMQGQIPEWVLKHQKLENLYLYASNLSGEIGPNITALNLQELDLSMNKFSGSIPEDIANLKKLRLLYLYYNNLTGPIPAGVGMMPDLTDIRLFNNKLSGPLPAELGKHSELGNFEVSNNNLSGELPDTLCFNKKLFDIVVFNNSFSGVFPTNLGDCKTINNIMAYNNHFVGDFPKKIWSFELLTNVMIYNNNFTGTLPSEISFNISRIEMENNRFSGALPSTAVGLKSFTAENNQFSGELPADMSRLANLTELNLAGNQLSGSIPPSIKSLTSLTSLNLSRNQISGEIPAAVGWMGLYILDLSDNGLTGDIPQDFSNLHLNFLNLSSNQLSGEVPETLQNGAYYRSFLGNHGLCATVNTNMNLPACPHQSHNKSSTNLIIVFSVLTGVVFIGAVAIWLLIIRHQKRQQDLAGWKMTPFRTLHFSECDVLGNLHEENVIGSGGSGKVYRINIGGKGSAGMVVAVKRLWRTAAKSDAKSDKEFDAEVRILGEVRHINIIDLLCCISGDDTKLLVYEYMENGSLDRWLHRRDDGVPYGCRAKANEKVDVYAFGIVLLELTTGQAATDDDYCNLVDWAWRWYKASGALHLHDVIDMRIPDRAAFLEDAVAVFLLGVSCIRDDPASRPTMKEVLEQLVHNADYIRNWGILRFPTTTFGELPDTLCFNKKLFDIVVFNNSFSGVFPTNLGDWKTINNVMAYNNHFVGDFPKKIWSFELLTNVMIYNNFTGTLPSEISFNILRIEMGNNRFSGALPSAAVGLKSFLAENNQFSGELPTDMSRLANLTKLNLAGNQLLTIVKIYINNFASTLPSNKIVSKSNVKEIGLQSQGKMGFAHCDNGRLQRNWPC

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.000000 0.0 0.040252

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_02g0227600 SBH 0.000000 0.0 0.394133
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g13420 RBH 0.000000 0.0 0.125496
Nipponbare | IRGSP 1.0 | RAP-db Os02g0227600 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0009580 RBH 0.0 1.875847 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0009660 SBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0009530 RBH 0.095448 1.284628 0.192024
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0009350 RBH 0.044456 0.018416 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0009490 RBH 0.486751 0.0 1.492584
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0119700 RBH 0.4960535 1.3040785 0.0331235
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_02g0009360 SBH 0.790263 0.433688 1.495910
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0122300 RBH 0.4457055 0.725968 0.04257
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0009750 RBH 0.049210 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_02g0009390 RBH 0.567211 0.000000 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0009720 RBH 5.951255 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_02g0009800 RBH 3.465631 0.668533 2.012019
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0009440 RBH 0.114589 0.779904 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_02G009650 RBH 0.0 0.0 0.194379
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0009520 SBH 4.296732 21.874952 4.736391
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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