Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
Os01g0162800		OGI:01011260 \| 16/16			Nipponbare \| IRGSP 1.0 \| RAP-db			Chr01:3272839-3276375		Homologues MicroCollinearity RGI-JBrowse RAP-DB Ricevarmap2
Gene Symbol		-
DNA seq		ATGAACTACACGCATAGATGCCTCCACAGCCACAAACTCCCTCTTCTCATCCTCCTCATTGCCATCGTCGTCATACTCATACAGCCATACTCCATCCATGCTGCTGCCAACAGCAGCAACACCACCATCAGATGCCTGACATCTCAGTCATCCGCCCTCCTCCAGCTGAAGAGCTCCTTCCACGACGCGAGCCGCCTCTCGTCCTGGCAACCGGACACCGACTGCTGCCGATGGGAGGGCGTCACCTGCCGCATGGCTTCTGGGCATGTCGTTGTGCTGGACCTCAGTGATGGTTATCTTCAGAGCAATGGGCTGCACCCTGCACTGTTCAACCTCACCTTGCTCACAAACCTCGCCCTCAGTGGCAATGACTTCATGGGAGCACAACTCCCAGATTCTGGGTTTGAGCGGCTTTCGAAACTTGTCAGCCTTGACCTCTCTGCGACCAACTTTGCTGGCCAGATCCCCATTGGCATTGGAAATCTGAGCAACATGCTTGCTCTTGACTTGTCTCATAACCCCAATTTGTACCTCACGGAGCCAAGTTTTCAGACCTTCATAGCAAACCTGAGCAATCTGAGAGAGCTCTACCTTGATGAGATGGACCTCTCTAGCAGCGGGGCAACTTGGTCAAGCGATGTAGCAGCTTCTGCTCCACAGATTCAGATACTTAGCTTCATGTCATGTGGCTTGTCTGGTTTCATTGATCCCTCCTTCTCACGACTCCGTTCACTGACAATGATCAACGTCAGACTCAATGTCATCAGTGGCATGGTTCCTGAGTTCTTTGCCAACTTCTCTTTCTTAACAATTCTGGAGCTATCTGGCAATGCTTTTGAGGGTCAGTTCCCCACAAAGATCTTCCAACTAAAAAGGCTGCAGTTTATTGATTTATACTGGAACAATAAGCTTTGTGTGCAGTTGCCAGAATTCCTACCTGGTAGTCGTCTGGAAGTGTTGGATCTCATATTGACCAACCGTTCTAACGCCATACCAGCATCAGTGGTCAATCTCAAGTATCTAAAGCATTTGGGCCTTACAACAGTAGAGGCTTCAATGAATTCTGATATCCTTTTGATCAGAGAACTCCACTGGCTGGAAGTTCTCCGGCTCTATGGAGGATCAGGACAAGGGAAGCTGGTGTCGTTCTCTTGGATAGGCAGCCTTAAACATTTGACATACCTGGAGCTTGGCAATTACAACTTCTCTGGATTGATGCCCTCTTCGATTATCAATCTTACAAATCTGACAAGTTTAACGCTCTACAATTGCAGCATGTCTGGGCCCATACCTTCTTGGATTGGGAACTTGATCCAACTCAATAATTTGAACTTCAGAAACAACAACCTCAATGGTGAGATCCCTACAAGAATTTGAAATCTCAATCATAGCTCAACAGTTTCTAATGGTACAGTAGTACAGTACAGGTGGTAATACTGAATAGAACCTACTCCTTACTTTAAAAGGTTATTGATGTTTTAGTATTTTGCCGCATTGACTAGGAAATGCCCTAGATCACAAGTAACTTAAAAATTAGCTTCTACTCCAGTGAGTCCAGTCCATTTGCACTGCTACTTTTATTTATATTTATAAGAGAGCCTACAAATTATAGCTTGTTGACTATAACTAGATGTGTATGCAGGAACAATTCCAAAGTCCATCTTCGCACTTCCTGCGTTGCAATCACTATATCTAGATTCTAATCAACTTTCTGGTCATTTAGAAGACATCCCTGTTCCATTATCTTCATCTGTGTATGACATTGATTTAAGCAACAATTGGCTTCATGGCCCCATTCCCAAATCATTTTTCTGTCTTCCAAATCTTGAGTATCTCAATCTTGAGTCAAATCACTTGACCGGCATAGTGGAACTTAGGCCTTTCTGGAGACTAAGAAGCCTTTATTTTCTGGGTTTCTCTAACAATAAGCTGTCGGTGATTGATGGAGAAGATTCTCCATCTCAATATCTCCCTAAGATTCAGCACCTAGGACTAGCATGTTGCAACCTCACAAAACTTCCAAGAATTCTGAGACATCTATATGACATTCTTGAGCTAGACCTTTCAAGTAATAAGATTGGTGGAGTTATACCAGGATGGATATGGGAGATTTGGAAGGACACCCTTGGATCATTGGACCTCTCGAACAATGCATTTACTAGCCTGGAGAACTCTCCCTCTCTTGTTACATTTACACATCTAAGCCATCTAAATCTCAGTTTCAATAGACTTCAAGGAGAAATACCCATACCAGCCATATCATTGCCTTATGGTGTAGTTGTATTGGATTACTCAAACAATGGGTTCTCTTCCATACTACGTACATTTGGTAGGTATCTTAACAAAGTAGCCTATATTAACTTGTCCAAAAACAAACTAAAAGGCTATGTACCCATTTCCATTTGTAGTATGAAGAAACTCCAATTCCTGTACTTATCTGATAACAACTTTAGTGGTTTCGTTCCATCTTGTCTGGTAGAAGGCAGAAGCTTAAGGGTACTGAATTTGAGGGGGAATAAATTCAACGGGATGTTGCCTAAGGGCATTAAAGAAGGATGTAAGCTTGAGACTATAGATTTGAACAGCAACCAAATTGAAGGGAGGCTGCCCAGAACACTATCAAACTGCAAAAGTCTGGAACTCCTCGATGTTAGTAACAATCACATCCTCGATCTGTTCCCTTTGTGGCTGGGGAATCTTCCCAAGCTTCGAGTTCTTGTACTGAGATCAAACCAATTATATGGCACAATTAAGGGTCTCCATAATAGTGATCTAACAAGGGATCACTTCTCAAGCTTGCAAATACTTGATTTAGCCAATAACACTCTATCTGGTCAGTTGCCCCCAAAATGGTTTGAGAAACTGAAATCAATGATGGCAAATGTCGATGATGGACAAGTTTTGGAGCACCAAACAAACTTTTCACAAGGATTTATCTATCGAGACATCATCACTATCACATACAAAGGGTTTGATATGACATTCAATAGAATGCTAACTACCTTTAAAGCAATTGATTTCTCAAATAACTCATTTGTTGGAGTTATTCCTGGAACGATAGGGAGTCTTGTTTCACTTCATGGACTTAACATGTCACATAATAATTTCACTGGAGCAATCCCGCAACAGCTTGGTAACTTGGCTCAGCTAGAGTCCTTGGATCTCTCTTGGAACCAGCTCTCAGGGGTAATACCACATGAGTTAACATTTCTAACTTCTCTTTCTTGGCTGAATCTTTCGAATAACAACTTGACTGGAAGAATACCACAGAGCAACCAGTTCTTGTCGTTTTCCAACAGTTCATTTGAAGGTAATTTGGGCCTCTGTGGAAGGCCACTATCCAAAGATTGTGATAGTTCTGGTTCAATAACTCCAAATACAGAAGCTTCTTCAGAAGACAGCAGTTTGTGGCAAGATAAAGTAGGGGTCATCCTAATGTTTGTCTTTGCTGGCTTGGGGTTTGTGGTTGGCTTTATGCTGACAATCATATTTCAACTGGTTTGCCAGGTCAAAGGGGGAACCTACTGTATTTGTTAG More
CDS seq		ATGAACTACACGCATAGATGCCTCCACAGCCACAAACTCCCTCTTCTCATCCTCCTCATTGCCATCGTCGTCATACTCATACAGCCATACTCCATCCATGCTGCTGCCAACAGCAGCAACACCACCATCAGATGCCTGACATCTCAGTCATCCGCCCTCCTCCAGCTGAAGAGCTCCTTCCACGACGCGAGCCGCCTCTCGTCCTGGCAACCGGACACCGACTGCTGCCGATGGGAGGGCGTCACCTGCCGCATGGCTTCTGGGCATGTCGTTGTGCTGGACCTCAGTGATGGTTATCTTCAGAGCAATGGGCTGCACCCTGCACTGTTCAACCTCACCTTGCTCACAAACCTCGCCCTCAGTGGCAATGACTTCATGGGAGCACAACTCCCAGATTCTGGGTTTGAGCGGCTTTCGAAACTTGTCAGCCTTGACCTCTCTGCGACCAACTTTGCTGGCCAGATCCCCATTGGCATTGGAAATCTGAGCAACATGCTTGCTCTTGACTTGTCTCATAACCCCAATTTGTACCTCACGGAGCCAAGTTTTCAGACCTTCATAGCAAACCTGAGCAATCTGAGAGAGCTCTACCTTGATGAGATGGACCTCTCTAGCAGCGGGGCAACTTGGTCAAGCGATGTAGCAGCTTCTGCTCCACAGATTCAGATACTTAGCTTCATGTCATGTGGCTTGTCTGGTTTCATTGATCCCTCCTTCTCACGACTCCGTTCACTGACAATGATCAACGTCAGACTCAATGTCATCAGTGGCATGGTTCCTGAGTTCTTTGCCAACTTCTCTTTCTTAACAATTCTGGAGCTATCTGGCAATGCTTTTGAGGGTCAGTTCCCCACAAAGATCTTCCAACTAAAAAGGCTGCAGTTTATTGATTTATACTGGAACAATAAGCTTTGTGTGCAGTTGCCAGAATTCCTACCTGGTAGTCGTCTGGAAGTGTTGGATCTCATATTGACCAACCGTTCTAACGCCATACCAGCATCAGTGGTCAATCTCAAGTATCTAAAGCATTTGGGCCTTACAACAGTAGAGGCTTCAATGAATTCTGATATCCTTTTGATCAGAGAACTCCACTGGCTGGAAGTTCTCCGGCTCTATGGAGGATCAGGACAAGGGAAGCTGGTGTCGTTCTCTTGGATAGGCAGCCTTAAACATTTGACATACCTGGAGCTTGGCAATTACAACTTCTCTGGATTGATGCCCTCTTCGATTATCAATCTTACAAATCTGACAAGTTTAACGCTCTACAATTGCAGCATGTCTGGGCCCATACCTTCTTGGATTGGGAACTTGATCCAACTCAATAATTTGAACTTCAGAAACAACAACCTCAATGGAACAATTCCAAAGTCCATCTTCGCACTTCCTGCGTTGCAATCACTATATCTAGATTCTAATCAACTTTCTGGTCATTTAGAAGACATCCCTGTTCCATTATCTTCATCTGTGTATGACATTGATTTAAGCAACAATTGGCTTCATGGCCCCATTCCCAAATCATTTTTCTGTCTTCCAAATCTTGAGTATCTCAATCTTGAGTCAAATCACTTGACCGGCATAGTGGAACTTAGGCCTTTCTGGAGACTAAGAAGCCTTTATTTTCTGGGTTTCTCTAACAATAAGCTGTCGGTGATTGATGGAGAAGATTCTCCATCTCAATATCTCCCTAAGATTCAGCACCTAGGACTAGCATGTTGCAACCTCACAAAACTTCCAAGAATTCTGAGACATCTATATGACATTCTTGAGCTAGACCTTTCAAGTAATAAGATTGGTGGAGTTATACCAGGATGGATATGGGAGATTTGGAAGGACACCCTTGGATCATTGGACCTCTCGAACAATGCATTTACTAGCCTGGAGAACTCTCCCTCTCTTGTTACATTTACACATCTAAGCCATCTAAATCTCAGTTTCAATAGACTTCAAGGAGAAATACCCATACCAGCCATATCATTGCCTTATGGTGTAGTTGTATTGGATTACTCAAACAATGGGTTCTCTTCCATACTACGTACATTTGAAGGCAGAAGCTTAAGGGTACTGAATTTGAGGGGGAATAAATTCAACGGGATGTTGCCTAAGGGCATTAAAGAAGGATGTAAGCTTGAGACTATAGATTTGAACAGCAACCAAATTGAAGGGAGGCTGCCCAGAACACTATCAAACTGCAAAAGTCTGGAACTCCTCGATGTTAGTAACAATCACATCCTCGATCTGTTCCCTTTGTGGCTGGGGAATCTTCCCAAGCTTCGAGTTCTTGTACTGAGATCAAACCAATTATATGGCACAATTAAGGGTCTCCATAATAGTGATCTAACAAGGGATCACTTCTCAAGCTTGCAAATACTTGATTTAGCCAATAACACTCTATCTGGTCAGTTGCCCCCAAAATGGTTTGAGAAACTGAAATCAATGATGGCAAATGTCGATGATGGACAAGTTTTGGAGCACCAAACAAACTTTTCACAAGGATTTATCTATCGAGACATCATCACTATCACATACAAAGGGTTTGATATGACATTCAATAGAATGCTAACTACCTTTAAAGCAATTGATTTCTCAAATAACTCATTTGTTGGAGTTATTCCTGGAACGATAGGGAGTCTTGTTTCACTTCATGGACTTAACATGTCACATAATAATTTCACTGGAGCAATCCCGCAACAGCTTGGTAACTTGGCTCAGCTAGAGTCCTTGGATCTCTCTTGGAACCAGCTCTCAGGGGTAATACCACATGAGTTAACATTTCTAACTTCTCTTTCTTGGCTGAATCTTTCGAATAACAACTTGACTGGAAGAATACCACAGAGCAACCAGTTCTTGTCGTTTTCCAACAGTTCATTTGAAGGTAATTTGGGCCTCTGTGGAAGGCCACTATCCAAAGATTGTGATAGTTCTGGTTCAATAACTCCAAATACAGAAGCTTCTTCAGAAGACAGCAGTTTGTGGCAAGATAAAGTAGGGGTCATCCTAATGTTTGTCTTTGCTGGCTTGGGGTTTGTGGTTGGCTTTATGCTGACAATCATATTTCAACTGGTTTGCCAGGTCAAAGGGGGAACCTACTGTATTTGTTAG More
Protein seq		MNYTHRCLHSHKLPLLILLIAIVVILIQPYSIHAAANSSNTTIRCLTSQSSALLQLKSSFHDASRLSSWQPDTDCCRWEGVTCRMASGHVVVLDLSDGYLQSNGLHPALFNLTLLTNLALSGNDFMGAQLPDSGFERLSKLVSLDLSATNFAGQIPIGIGNLSNMLALDLSHNPNLYLTEPSFQTFIANLSNLRELYLDEMDLSSSGATWSSDVAASAPQIQILSFMSCGLSGFIDPSFSRLRSLTMINVRLNVISGMVPEFFANFSFLTILELSGNAFEGQFPTKIFQLKRLQFIDLYWNNKLCVQLPEFLPGSRLEVLDLILTNRSNAIPASVVNLKYLKHLGLTTVEASMNSDILLIRELHWLEVLRLYGGSGQGKLVSFSWIGSLKHLTYLELGNYNFSGLMPSSIINLTNLTSLTLYNCSMSGPIPSWIGNLIQLNNLNFRNNNLNGTIPKSIFALPALQSLYLDSNQLSGHLEDIPVPLSSSVYDIDLSNNWLHGPIPKSFFCLPNLEYLNLESNHLTGIVELRPFWRLRSLYFLGFSNNKLSVIDGEDSPSQYLPKIQHLGLACCNLTKLPRILRHLYDILELDLSSNKIGGVIPGWIWEIWKDTLGSLDLSNNAFTSLENSPSLVTFTHLSHLNLSFNRLQGEIPIPAISLPYGVVVLDYSNNGFSSILRTFEGRSLRVLNLRGNKFNGMLPKGIKEGCKLETIDLNSNQIEGRLPRTLSNCKSLELLDVSNNHILDLFPLWLGNLPKLRVLVLRSNQLYGTIKGLHNSDLTRDHFSSLQILDLANNTLSGQLPPKWFEKLKSMMANVDDGQVLEHQTNFSQGFIYRDIITITYKGFDMTFNRMLTTFKAIDFSNNSFVGVIPGTIGSLVSLHGLNMSHNNFTGAIPQQLGNLAQLESLDLSWNQLSGVIPHELTFLTSLSWLNLSNNNLTGRIPQSNQFLSFSNSSFEGNLGLCGRPLSKDCDSSGSITPNTEASSEDSSLWQDKVGVILMFVFAGLGFVVGFMLTIIFQLVCQVKGGTYCIC
Function		Receptor-like protein 19 [UniProtKB/Swiss-Prot:Q9ZUK3]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
Os01g0162800	Os01t0162800-00	Chr01	3272839	3276375	+	irgsp1_rep
CDS seq	ATGAACTACACGCATAGATGCCTCCACAGCCACAAACTCCCTCTTCTCATCCTCCTCATTGCCATCGTCGTCATACTCATACAGCCATACTCCATCCATGCTGCTGCCAACAGCAGCAACACCACCATCAGATGCCTGACATCTCAGTCATCCGCCCTCCTCCAGCTGAAGAGCTCCTTCCACGACGCGAGCCGCCTCTCGTCCTGGCAACCGGACACCGACTGCTGCCGATGGGAGGGCGTCACCTGCCGCATGGCTTCTGGGCATGTCGTTGTGCTGGACCTCAGTGATGGTTATCTTCAGAGCAATGGGCTGCACCCTGCACTGTTCAACCTCACCTTGCTCACAAACCTCGCCCTCAGTGGCAATGACTTCATGGGAGCACAACTCCCAGATTCTGGGTTTGAGCGGCTTTCGAAACTTGTCAGCCTTGACCTCTCTGCGACCAACTTTGCTGGCCAGATCCCCATTGGCATTGGAAATCTGAGCAACATGCTTGCTCTTGACTTGTCTCATAACCCCAATTTGTACCTCACGGAGCCAAGTTTTCAGACCTTCATAGCAAACCTGAGCAATCTGAGAGAGCTCTACCTTGATGAGATGGACCTCTCTAGCAGCGGGGCAACTTGGTCAAGCGATGTAGCAGCTTCTGCTCCACAGATTCAGATACTTAGCTTCATGTCATGTGGCTTGTCTGGTTTCATTGATCCCTCCTTCTCACGACTCCGTTCACTGACAATGATCAACGTCAGACTCAATGTCATCAGTGGCATGGTTCCTGAGTTCTTTGCCAACTTCTCTTTCTTAACAATTCTGGAGCTATCTGGCAATGCTTTTGAGGGTCAGTTCCCCACAAAGATCTTCCAACTAAAAAGGCTGCAGTTTATTGATTTATACTGGAACAATAAGCTTTGTGTGCAGTTGCCAGAATTCCTACCTGGTAGTCGTCTGGAAGTGTTGGATCTCATATTGACCAACCGTTCTAACGCCATACCAGCATCAGTGGTCAATCTCAAGTATCTAAAGCATTTGGGCCTTACAACAGTAGAGGCTTCAATGAATTCTGATATCCTTTTGATCAGAGAACTCCACTGGCTGGAAGTTCTCCGGCTCTATGGAGGATCAGGACAAGGGAAGCTGGTGTCGTTCTCTTGGATAGGCAGCCTTAAACATTTGACATACCTGGAGCTTGGCAATTACAACTTCTCTGGATTGATGCCCTCTTCGATTATCAATCTTACAAATCTGACAAGTTTAACGCTCTACAATTGCAGCATGTCTGGGCCCATACCTTCTTGGATTGGGAACTTGATCCAACTCAATAATTTGAACTTCAGAAACAACAACCTCAATGGAACAATTCCAAAGTCCATCTTCGCACTTCCTGCGTTGCAATCACTATATCTAGATTCTAATCAACTTTCTGGTCATTTAGAAGACATCCCTGTTCCATTATCTTCATCTGTGTATGACATTGATTTAAGCAACAATTGGCTTCATGGCCCCATTCCCAAATCATTTTTCTGTCTTCCAAATCTTGAGTATCTCAATCTTGAGTCAAATCACTTGACCGGCATAGTGGAACTTAGGCCTTTCTGGAGACTAAGAAGCCTTTATTTTCTGGGTTTCTCTAACAATAAGCTGTCGGTGATTGATGGAGAAGATTCTCCATCTCAATATCTCCCTAAGATTCAGCACCTAGGACTAGCATGTTGCAACCTCACAAAACTTCCAAGAATTCTGAGACATCTATATGACATTCTTGAGCTAGACCTTTCAAGTAATAAGATTGGTGGAGTTATACCAGGATGGATATGGGAGATTTGGAAGGACACCCTTGGATCATTGGACCTCTCGAACAATGCATTTACTAGCCTGGAGAACTCTCCCTCTCTTGTTACATTTACACATCTAAGCCATCTAAATCTCAGTTTCAATAGACTTCAAGGAGAAATACCCATACCAGCCATATCATTGCCTTATGGTGTAGTTGTATTGGATTACTCAAACAATGGGTTCTCTTCCATACTACGTACATTTGAAGGCAGAAGCTTAAGGGTACTGAATTTGAGGGGGAATAAATTCAACGGGATGTTGCCTAAGGGCATTAAAGAAGGATGTAAGCTTGAGACTATAGATTTGAACAGCAACCAAATTGAAGGGAGGCTGCCCAGAACACTATCAAACTGCAAAAGTCTGGAACTCCTCGATGTTAGTAACAATCACATCCTCGATCTGTTCCCTTTGTGGCTGGGGAATCTTCCCAAGCTTCGAGTTCTTGTACTGAGATCAAACCAATTATATGGCACAATTAAGGGTCTCCATAATAGTGATCTAACAAGGGATCACTTCTCAAGCTTGCAAATACTTGATTTAGCCAATAACACTCTATCTGGTCAGTTGCCCCCAAAATGGTTTGAGAAACTGAAATCAATGATGGCAAATGTCGATGATGGACAAGTTTTGGAGCACCAAACAAACTTTTCACAAGGATTTATCTATCGAGACATCATCACTATCACATACAAAGGGTTTGATATGACATTCAATAGAATGCTAACTACCTTTAAAGCAATTGATTTCTCAAATAACTCATTTGTTGGAGTTATTCCTGGAACGATAGGGAGTCTTGTTTCACTTCATGGACTTAACATGTCACATAATAATTTCACTGGAGCAATCCCGCAACAGCTTGGTAACTTGGCTCAGCTAGAGTCCTTGGATCTCTCTTGGAACCAGCTCTCAGGGGTAATACCACATGAGTTAACATTTCTAACTTCTCTTTCTTGGCTGAATCTTTCGAATAACAACTTGACTGGAAGAATACCACAGAGCAACCAGTTCTTGTCGTTTTCCAACAGTTCATTTGAAGGTAATTTGGGCCTCTGTGGAAGGCCACTATCCAAAGATTGTGATAGTTCTGGTTCAATAACTCCAAATACAGAAGCTTCTTCAGAAGACAGCAGTTTGTGGCAAGATAAAGTAGGGGTCATCCTAATGTTTGTCTTTGCTGGCTTGGGGTTTGTGGTTGGCTTTATGCTGACAATCATATTTCAACTGGTTTGCCAGGTCAAAGGGGGAACCTACTGTATTTGTTAG More
Protein seq	MNYTHRCLHSHKLPLLILLIAIVVILIQPYSIHAAANSSNTTIRCLTSQSSALLQLKSSFHDASRLSSWQPDTDCCRWEGVTCRMASGHVVVLDLSDGYLQSNGLHPALFNLTLLTNLALSGNDFMGAQLPDSGFERLSKLVSLDLSATNFAGQIPIGIGNLSNMLALDLSHNPNLYLTEPSFQTFIANLSNLRELYLDEMDLSSSGATWSSDVAASAPQIQILSFMSCGLSGFIDPSFSRLRSLTMINVRLNVISGMVPEFFANFSFLTILELSGNAFEGQFPTKIFQLKRLQFIDLYWNNKLCVQLPEFLPGSRLEVLDLILTNRSNAIPASVVNLKYLKHLGLTTVEASMNSDILLIRELHWLEVLRLYGGSGQGKLVSFSWIGSLKHLTYLELGNYNFSGLMPSSIINLTNLTSLTLYNCSMSGPIPSWIGNLIQLNNLNFRNNNLNGTIPKSIFALPALQSLYLDSNQLSGHLEDIPVPLSSSVYDIDLSNNWLHGPIPKSFFCLPNLEYLNLESNHLTGIVELRPFWRLRSLYFLGFSNNKLSVIDGEDSPSQYLPKIQHLGLACCNLTKLPRILRHLYDILELDLSSNKIGGVIPGWIWEIWKDTLGSLDLSNNAFTSLENSPSLVTFTHLSHLNLSFNRLQGEIPIPAISLPYGVVVLDYSNNGFSSILRTFEGRSLRVLNLRGNKFNGMLPKGIKEGCKLETIDLNSNQIEGRLPRTLSNCKSLELLDVSNNHILDLFPLWLGNLPKLRVLVLRSNQLYGTIKGLHNSDLTRDHFSSLQILDLANNTLSGQLPPKWFEKLKSMMANVDDGQVLEHQTNFSQGFIYRDIITITYKGFDMTFNRMLTTFKAIDFSNNSFVGVIPGTIGSLVSLHGLNMSHNNFTGAIPQQLGNLAQLESLDLSWNQLSGVIPHELTFLTSLSWLNLSNNNLTGRIPQSNQFLSFSNSSFEGNLGLCGRPLSKDCDSSGSITPNTEASSEDSSLWQDKVGVILMFVFAGLGFVVGFMLTIIFQLVCQVKGGTYCIC More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	None	None	None

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_01g0162800	RBH	0.369198	0.466939	1.049860
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os01g06900	RBH	0.594768	0.823849	0.519105
Nipponbare \| IRGSP 1.0 \| RAP-db	Os01g0161300	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_01g0004530	RBH	0.0	1.509433	0.000000
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_01g0004220	SBH	0.000000	0.0	0.000000
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_01g0004510	SBH	0.072213	0.764565	1.948779
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_01g0004130	SBH	0.134132	0.0	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_01g0036380	SBH	22.455767	178.846283	72.693260
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_01G0056900	SBH	0.664284	0	0.018279
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_01g0004250	SBH	0.024807	0.015142	0.051441
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_01G0058000	SBH	1.0294765	0.135955	0.996199
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_01g0004180	SBH	0.026117	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_01g0004320	RBH	0.105607	0.975155	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_01g0036560	SBH	11.130883	163.505447	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_01g0004300	SBH	0.032240	0.0	0.000000
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_01g0004230	SBH	0.093167	0.000000	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_01G004350	RBH	0.072881	0.481987	0.494161
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_01g0004240	SBH	0.000000	1.917465	0.922602

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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