Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
LOC_Os01g06900		OGI:01011260 \| 16/16			Nipponbare \| IRGSP 1.0 \| MSU			Chr01:3272839-3276416		Homologues MicroCollinearity RGI-JBrowse RGAP Ricevarmap2
Gene Symbol		-
DNA seq		ATGAACTACACGCATAGATGCCTCCACAGCCACAAACTCCCTCTTCTCATCCTCCTCATTGCCATCGTCGTCATACTCATACAGCCATACTCCATCCATGCTGCTGCCAACAGCAGCAACACCACCATCAGATGCCTGACATCTCAGTCATCCGCCCTCCTCCAGCTGAAGAGCTCCTTCCACGACGCGAGCCGCCTCTCGTCCTGGCAACCGGACACCGACTGCTGCCGATGGGAGGGCGTCACCTGCCGCATGGCTTCTGGGCATGTCGTTGTGCTGGACCTCAGTGATGGTTATCTTCAGAGCAATGGGCTGCACCCTGCACTGTTCAACCTCACCTTGCTCACAAACCTCGCCCTCAGTGGCAATGACTTCATGGGAGCACAACTCCCAGATTCTGGGTTTGAGCGGCTTTCGAAACTTGTCAGCCTTGACCTCTCTGCGACCAACTTTGCTGGCCAGATCCCCATTGGCATTGGAAATCTGAGCAACATGCTTGCTCTTGACTTGTCTCATAACCCCAATTTGTACCTCACGGAGCCAAGTTTTCAGACCTTCATAGCAAACCTGAGCAATCTGAGAGAGCTCTACCTTGATGAGATGGACCTCTCTAGCAGCGGGGCAACTTGGTCAAGCGATGTAGCAGCTTCTGCTCCACAGATTCAGATACTTAGCTTCATGTCATGTGGCTTGTCTGGTTTCATTGATCCCTCCTTCTCACGACTCCGTTCACTGACAATGATCAACGTCAGACTCAATGTCATCAGTGGCATGGTTCCTGAGTTCTTTGCCAACTTCTCTTTCTTAACAATTCTGGAGCTATCTGGCAATGCTTTTGAGGGTCAGTTCCCCACAAAGATCTTCCAACTAAAAAGGCTGCAGTTTATTGATTTATACTGGAACAATAAGCTTTGTGTGCAGTTGCCAGAATTCCTACCTGGTAGTCGTCTGGAAGTGTTGGATCTCATATTGACCAACCGTTCTAACGCCATACCAGCATCAGTGGTCAATCTCAAGTATCTAAAGCATTTGGGCCTTACAACAGTAGAGGCTTCAATGAATTCTGATATCCTTTTGATCAGAGAACTCCACTGGCTGGAAGTTCTCCGGCTCTATGGAGGATCAGGACAAGGGAAGCTGGTGTCGTTCTCTTGGATAGGCAGCCTTAAACATTTGACATACCTGGAGCTTGGCAATTACAACTTCTCTGGATTGATGCCCTCTTCGATTATCAATCTTACAAATCTGACAAGTTTAACGCTCTACAATTGCAGCATGTCTGGGCCCATACCTTCTTGGATTGGGAACTTGATCCAACTCAATAATTTGAACTTCAGAAACAACAACCTCAATGGTGAGATCCCTACAAGAATTTGAAATCTCAATCATAGCTCAACAGTTTCTAATGGTACAGTAGTACAGTACAGGTGGTAATACTGAATAGAACCTACTCCTTACTTTAAAAGGTTATTGATGTTTTAGTATTTTGCCGCATTGACTAGGAAATGCCCTAGATCACAAGTAACTTAAAAATTAGCTTCTACTCCAGTGAGTCCAGTCCATTTGCACTGCTACTTTTATTTATATTTATAAGAGAGCCTACAAATTATAGCTTGTTGACTATAACTAGATGTGTATGCAGGAACAATTCCAAAGTCCATCTTCGCACTTCCTGCGTTGCAATCACTATATCTAGATTCTAATCAACTTTCTGGTCATTTAGAAGACATCCCTGTTCCATTATCTTCATCTGTGTATGACATTGATTTAAGCAACAATTGGCTTCATGGCCCCATTCCCAAATCATTTTTCTGTCTTCCAAATCTTGAGTATCTCAATCTTGAGTCAAATCACTTGACCGGCATAGTGGAACTTAGGCCTTTCTGGAGACTAAGAAGCCTTTATTTTCTGGGTTTCTCTAACAATAAGCTGTCGGTGATTGATGGAGAAGATTCTCCATCTCAATATCTCCCTAAGATTCAGCACCTAGGACTAGCATGTTGCAACCTCACAAAACTTCCAAGAATTCTGAGACATCTATATGACATTCTTGAGCTAGACCTTTCAAGTAATAAGATTGGTGGAGTTATACCAGGATGGATATGGGAGATTTGGAAGGACACCCTTGGATCATTGGACCTCTCGAACAATGCATTTACTAGCCTGGAGAACTCTCCCTCTCTTGTTACATTTACACATCTAAGCCATCTAAATCTCAGTTTCAATAGACTTCAAGGAGAAATACCCATACCAGCCATATCATTGCCTTATGGTGTAGTTGTATTGGATTACTCAAACAATGGGTTCTCTTCCATACTACGTACATTTGGTAGGTATCTTAACAAAGTAGCCTATATTAACTTGTCCAAAAACAAACTAAAAGGCTATGTACCCATTTCCATTTGTAGTATGAAGAAACTCCAATTCCTGTACTTATCTGATAACAACTTTAGTGGTTTCGTTCCATCTTGTCTGGTAGAAGGCAGAAGCTTAAGGGTACTGAATTTGAGGGGGAATAAATTCAACGGGATGTTGCCTAAGGGCATTAAAGAAGGATGTAAGCTTGAGACTATAGATTTGAACAGCAACCAAATTGAAGGGAGGCTGCCCAGAACACTATCAAACTGCAAAAGTCTGGAACTCCTCGATGTTAGTAACAATCACATCCTCGATCTGTTCCCTTTGTGGCTGGGGAATCTTCCCAAGCTTCGAGTTCTTGTACTGAGATCAAACCAATTATATGGCACAATTAAGGGTCTCCATAATAGTGATCTAACAAGGGATCACTTCTCAAGCTTGCAAATACTTGATTTAGCCAATAACACTCTATCTGGTCAGTTGCCCCCAAAATGGTTTGAGAAACTGAAATCAATGATGGCAAATGTCGATGATGGACAAGTTTTGGAGCACCAAACAAACTTTTCACAAGGATTTATCTATCGAGACATCATCACTATCACATACAAAGGGTTTGATATGACATTCAATAGAATGCTAACTACCTTTAAAGCAATTGATTTCTCAAATAACTCATTTGTTGGAGTTATTCCTGGAACGATAGGGAGTCTTGTTTCACTTCATGGACTTAACATGTCACATAATAATTTCACTGGAGCAATCCCGCAACAGCTTGGTAACTTGGCTCAGCTAGAGTCCTTGGATCTCTCTTGGAACCAGCTCTCAGGGGTAATACCACATGAGTTAACATTTCTAACTTCTCTTTCTTGGCTGAATCTTTCGAATAACAACTTGACTGGAAGAATACCACAGAGCAACCAGTTCTTGTCGTTTTCCAACAGTTCATTTGAAGGTAATTTGGGCCTCTGTGGAAGGCCACTATCCAAAGATTGTGATAGTTCTGGTTCAATAACTCCAAATACAGAAGCTTCTTCAGAAGACAGCAGTTTGTGGCAAGATAAAGTAGGGGTCATCCTAATGTTTGTCTTTGCTGGCTTGGGGTTTGTGGTTGGCTTTATGCTGACAATCATATTTCAACTGGTTTGCCAGGTCAAAGGGGGAACCTACTGTATTTGTTAGAAATATCACTGAATCTACTTTGCTTTGGCTTTGGAAAATAG More
CDS seq		ATGAACTACACGCATAGATGCCTCCACAGCCACAAACTCCCTCTTCTCATCCTCCTCATTGCCATCGTCGTCATACTCATACAGCCATACTCCATCCATGCTGCTGCCAACAGCAGCAACACCACCATCAGATGCCTGACATCTCAGTCATCCGCCCTCCTCCAGCTGAAGAGCTCCTTCCACGACGCGAGCCGCCTCTCGTCCTGGCAACCGGACACCGACTGCTGCCGATGGGAGGGCGTCACCTGCCGCATGGCTTCTGGGCATGTCGTTGTGCTGGACCTCAGTGATGGTTATCTTCAGAGCAATGGGCTGCACCCTGCACTGTTCAACCTCACCTTGCTCACAAACCTCGCCCTCAGTGGCAATGACTTCATGGGAGCACAACTCCCAGATTCTGGGTTTGAGCGGCTTTCGAAACTTGTCAGCCTTGACCTCTCTGCGACCAACTTTGCTGGCCAGATCCCCATTGGCATTGGAAATCTGAGCAACATGCTTGCTCTTGACTTGTCTCATAACCCCAATTTGTACCTCACGGAGCCAAGTTTTCAGACCTTCATAGCAAACCTGAGCAATCTGAGAGAGCTCTACCTTGATGAGATGGACCTCTCTAGCAGCGGGGCAACTTGGTCAAGCGATGTAGCAGCTTCTGCTCCACAGATTCAGATACTTAGCTTCATGTCATGTGGCTTGTCTGGTTTCATTGATCCCTCCTTCTCACGACTCCGTTCACTGACAATGATCAACGTCAGACTCAATGTCATCAGTGGCATGGTTCCTGAGTTCTTTGCCAACTTCTCTTTCTTAACAATTCTGGAGCTATCTGGCAATGCTTTTGAGGGTCAGTTCCCCACAAAGATCTTCCAACTAAAAAGGCTGCAGTTTATTGATTTATACTGGAACAATAAGCTTTGTGTGCAGTTGCCAGAATTCCTACCTGGTAGTCGTCTGGAAGTGTTGGATCTCATATTGACCAACCGTTCTAACGCCATACCAGCATCAGTGGTCAATCTCAAGTATCTAAAGCATTTGGGCCTTACAACAGTAGAGGCTTCAATGAATTCTGATATCCTTTTGATCAGAGAACTCCACTGGCTGGAAGTTCTCCGGCTCTATGGAGGATCAGGACAAGGGAAGCTGGTGTCGTTCTCTTGGATAGGCAGCCTTAAACATTTGACATACCTGGAGCTTGGCAATTACAACTTCTCTGGATTGATGCCCTCTTCGATTATCAATCTTACAAATCTGACAAGTTTAACGCTCTACAATTGCAGCATGTCTGGGCCCATACCTTCTTGGATTGGGAACTTGATCCAACTCAATAATTTGAACTTCAGAAACAACAACCTCAATGGAACAATTCCAAAGTCCATCTTCGCACTTCCTGCGTTGCAATCACTATATCTAGATTCTAATCAACTTTCTGGTCATTTAGAAGACATCCCTGTTCCATTATCTTCATCTGTGTATGACATTGATTTAAGCAACAATTGGCTTCATGGCCCCATTCCCAAATCATTTTTCTGTCTTCCAAATCTTGAGTATCTCAATCTTGAGTCAAATCACTTGACCGGCATAGTGGAACTTAGGCCTTTCTGGAGACTAAGAAGCCTTTATTTTCTGGGTTTCTCTAACAATAAGCTGTCGGTGATTGATGGAGAAGATTCTCCATCTCAATATCTCCCTAAGATTCAGCACCTAGGACTAGCATGTTGCAACCTCACAAAACTTCCAAGAATTCTGAGACATCTATATGACATTCTTGAGCTAGACCTTTCAAGTAATAAGATTGGTGGAGTTATACCAGGATGGATATGGGAGATTTGGAAGGACACCCTTGGATCATTGGACCTCTCGAACAATGCATTTACTAGCCTGGAGAACTCTCCCTCTCTTGTTACATTTACACATCTAAGCCATCTAAATCTCAGTTTCAATAGACTTCAAGGAGAAATACCCATACCAGCCATATCATTGCCTTATGGTGTAGTTGTATTGGATTACTCAAACAATGGGTTCTCTTCCATACTACGTACATTTGGTAGGTATCTTAACAAAGTAGCCTATATTAACTTGTCCAAAAACAAACTAAAAGGCTATGTACCCATTTCCATTTGTAGTATGAAGAAACTCCAATTCCTGTACTTATCTGATAACAACTTTAGTGGTTTCGTTCCATCTTGTCTGGTAGAAGGCAGAAGCTTAAGGGTACTGAATTTGAGGGGGAATAAATTCAACGGGATGTTGCCTAAGGGCATTAAAGAAGGATGTAAGCTTGAGACTATAGATTTGAACAGCAACCAAATTGAAGGGAGGCTGCCCAGAACACTATCAAACTGCAAAAGTCTGGAACTCCTCGATGTTAGTAACAATCACATCCTCGATCTGTTCCCTTTGTGGCTGGGGAATCTTCCCAAGCTTCGAGTTCTTGTACTGAGATCAAACCAATTATATGGCACAATTAAGGGTCTCCATAATAGTGATCTAACAAGGGATCACTTCTCAAGCTTGCAAATACTTGATTTAGCCAATAACACTCTATCTGGTCAGTTGCCCCCAAAATGGTTTGAGAAACTGAAATCAATGATGGCAAATGTCGATGATGGACAAGTTTTGGAGCACCAAACAAACTTTTCACAAGGATTTATCTATCGAGACATCATCACTATCACATACAAAGGGTTTGATATGACATTCAATAGAATGCTAACTACCTTTAAAGCAATTGATTTCTCAAATAACTCATTTGTTGGAGTTATTCCTGGAACGATAGGGAGTCTTGTTTCACTTCATGGACTTAACATGTCACATAATAATTTCACTGGAGCAATCCCGCAACAGCTTGGTAACTTGGCTCAGCTAGAGTCCTTGGATCTCTCTTGGAACCAGCTCTCAGGGGTAATACCACATGAGTTAACATTTCTAACTTCTCTTTCTTGGCTGAATCTTTCGAATAACAACTTGACTGGAAGAATACCACAGAGCAACCAGTTCTTGTCGTTTTCCAACAGTTCATTTGAAGGTCAAAGGGGGAACCTACTGTATTTGTTAGAAATATCACTGAATCTACTTTGCTTTGGCTTTGGAAAATAG More
Protein seq		MNYTHRCLHSHKLPLLILLIAIVVILIQPYSIHAAANSSNTTIRCLTSQSSALLQLKSSFHDASRLSSWQPDTDCCRWEGVTCRMASGHVVVLDLSDGYLQSNGLHPALFNLTLLTNLALSGNDFMGAQLPDSGFERLSKLVSLDLSATNFAGQIPIGIGNLSNMLALDLSHNPNLYLTEPSFQTFIANLSNLRELYLDEMDLSSSGATWSSDVAASAPQIQILSFMSCGLSGFIDPSFSRLRSLTMINVRLNVISGMVPEFFANFSFLTILELSGNAFEGQFPTKIFQLKRLQFIDLYWNNKLCVQLPEFLPGSRLEVLDLILTNRSNAIPASVVNLKYLKHLGLTTVEASMNSDILLIRELHWLEVLRLYGGSGQGKLVSFSWIGSLKHLTYLELGNYNFSGLMPSSIINLTNLTSLTLYNCSMSGPIPSWIGNLIQLNNLNFRNNNLNGTIPKSIFALPALQSLYLDSNQLSGHLEDIPVPLSSSVYDIDLSNNWLHGPIPKSFFCLPNLEYLNLESNHLTGIVELRPFWRLRSLYFLGFSNNKLSVIDGEDSPSQYLPKIQHLGLACCNLTKLPRILRHLYDILELDLSSNKIGGVIPGWIWEIWKDTLGSLDLSNNAFTSLENSPSLVTFTHLSHLNLSFNRLQGEIPIPAISLPYGVVVLDYSNNGFSSILRTFGRYLNKVAYINLSKNKLKGYVPISICSMKKLQFLYLSDNNFSGFVPSCLVEGRSLRVLNLRGNKFNGMLPKGIKEGCKLETIDLNSNQIEGRLPRTLSNCKSLELLDVSNNHILDLFPLWLGNLPKLRVLVLRSNQLYGTIKGLHNSDLTRDHFSSLQILDLANNTLSGQLPPKWFEKLKSMMANVDDGQVLEHQTNFSQGFIYRDIITITYKGFDMTFNRMLTTFKAIDFSNNSFVGVIPGTIGSLVSLHGLNMSHNNFTGAIPQQLGNLAQLESLDLSWNQLSGVIPHELTFLTSLSWLNLSNNNLTGRIPQSNQFLSFSNSSFEGQRGNLLYLLEISLNLLCFGFGK
Function		Receptor-like protein 7 [UniProtKB/Swiss-Prot:Q9C699]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
LOC_Os01g06900	LOC_Os01g06900.1	Chr01	3272839	3276416	+	MSU_osa1r7
CDS seq	ATGAACTACACGCATAGATGCCTCCACAGCCACAAACTCCCTCTTCTCATCCTCCTCATTGCCATCGTCGTCATACTCATACAGCCATACTCCATCCATGCTGCTGCCAACAGCAGCAACACCACCATCAGATGCCTGACATCTCAGTCATCCGCCCTCCTCCAGCTGAAGAGCTCCTTCCACGACGCGAGCCGCCTCTCGTCCTGGCAACCGGACACCGACTGCTGCCGATGGGAGGGCGTCACCTGCCGCATGGCTTCTGGGCATGTCGTTGTGCTGGACCTCAGTGATGGTTATCTTCAGAGCAATGGGCTGCACCCTGCACTGTTCAACCTCACCTTGCTCACAAACCTCGCCCTCAGTGGCAATGACTTCATGGGAGCACAACTCCCAGATTCTGGGTTTGAGCGGCTTTCGAAACTTGTCAGCCTTGACCTCTCTGCGACCAACTTTGCTGGCCAGATCCCCATTGGCATTGGAAATCTGAGCAACATGCTTGCTCTTGACTTGTCTCATAACCCCAATTTGTACCTCACGGAGCCAAGTTTTCAGACCTTCATAGCAAACCTGAGCAATCTGAGAGAGCTCTACCTTGATGAGATGGACCTCTCTAGCAGCGGGGCAACTTGGTCAAGCGATGTAGCAGCTTCTGCTCCACAGATTCAGATACTTAGCTTCATGTCATGTGGCTTGTCTGGTTTCATTGATCCCTCCTTCTCACGACTCCGTTCACTGACAATGATCAACGTCAGACTCAATGTCATCAGTGGCATGGTTCCTGAGTTCTTTGCCAACTTCTCTTTCTTAACAATTCTGGAGCTATCTGGCAATGCTTTTGAGGGTCAGTTCCCCACAAAGATCTTCCAACTAAAAAGGCTGCAGTTTATTGATTTATACTGGAACAATAAGCTTTGTGTGCAGTTGCCAGAATTCCTACCTGGTAGTCGTCTGGAAGTGTTGGATCTCATATTGACCAACCGTTCTAACGCCATACCAGCATCAGTGGTCAATCTCAAGTATCTAAAGCATTTGGGCCTTACAACAGTAGAGGCTTCAATGAATTCTGATATCCTTTTGATCAGAGAACTCCACTGGCTGGAAGTTCTCCGGCTCTATGGAGGATCAGGACAAGGGAAGCTGGTGTCGTTCTCTTGGATAGGCAGCCTTAAACATTTGACATACCTGGAGCTTGGCAATTACAACTTCTCTGGATTGATGCCCTCTTCGATTATCAATCTTACAAATCTGACAAGTTTAACGCTCTACAATTGCAGCATGTCTGGGCCCATACCTTCTTGGATTGGGAACTTGATCCAACTCAATAATTTGAACTTCAGAAACAACAACCTCAATGGAACAATTCCAAAGTCCATCTTCGCACTTCCTGCGTTGCAATCACTATATCTAGATTCTAATCAACTTTCTGGTCATTTAGAAGACATCCCTGTTCCATTATCTTCATCTGTGTATGACATTGATTTAAGCAACAATTGGCTTCATGGCCCCATTCCCAAATCATTTTTCTGTCTTCCAAATCTTGAGTATCTCAATCTTGAGTCAAATCACTTGACCGGCATAGTGGAACTTAGGCCTTTCTGGAGACTAAGAAGCCTTTATTTTCTGGGTTTCTCTAACAATAAGCTGTCGGTGATTGATGGAGAAGATTCTCCATCTCAATATCTCCCTAAGATTCAGCACCTAGGACTAGCATGTTGCAACCTCACAAAACTTCCAAGAATTCTGAGACATCTATATGACATTCTTGAGCTAGACCTTTCAAGTAATAAGATTGGTGGAGTTATACCAGGATGGATATGGGAGATTTGGAAGGACACCCTTGGATCATTGGACCTCTCGAACAATGCATTTACTAGCCTGGAGAACTCTCCCTCTCTTGTTACATTTACACATCTAAGCCATCTAAATCTCAGTTTCAATAGACTTCAAGGAGAAATACCCATACCAGCCATATCATTGCCTTATGGTGTAGTTGTATTGGATTACTCAAACAATGGGTTCTCTTCCATACTACGTACATTTGGTAGGTATCTTAACAAAGTAGCCTATATTAACTTGTCCAAAAACAAACTAAAAGGCTATGTACCCATTTCCATTTGTAGTATGAAGAAACTCCAATTCCTGTACTTATCTGATAACAACTTTAGTGGTTTCGTTCCATCTTGTCTGGTAGAAGGCAGAAGCTTAAGGGTACTGAATTTGAGGGGGAATAAATTCAACGGGATGTTGCCTAAGGGCATTAAAGAAGGATGTAAGCTTGAGACTATAGATTTGAACAGCAACCAAATTGAAGGGAGGCTGCCCAGAACACTATCAAACTGCAAAAGTCTGGAACTCCTCGATGTTAGTAACAATCACATCCTCGATCTGTTCCCTTTGTGGCTGGGGAATCTTCCCAAGCTTCGAGTTCTTGTACTGAGATCAAACCAATTATATGGCACAATTAAGGGTCTCCATAATAGTGATCTAACAAGGGATCACTTCTCAAGCTTGCAAATACTTGATTTAGCCAATAACACTCTATCTGGTCAGTTGCCCCCAAAATGGTTTGAGAAACTGAAATCAATGATGGCAAATGTCGATGATGGACAAGTTTTGGAGCACCAAACAAACTTTTCACAAGGATTTATCTATCGAGACATCATCACTATCACATACAAAGGGTTTGATATGACATTCAATAGAATGCTAACTACCTTTAAAGCAATTGATTTCTCAAATAACTCATTTGTTGGAGTTATTCCTGGAACGATAGGGAGTCTTGTTTCACTTCATGGACTTAACATGTCACATAATAATTTCACTGGAGCAATCCCGCAACAGCTTGGTAACTTGGCTCAGCTAGAGTCCTTGGATCTCTCTTGGAACCAGCTCTCAGGGGTAATACCACATGAGTTAACATTTCTAACTTCTCTTTCTTGGCTGAATCTTTCGAATAACAACTTGACTGGAAGAATACCACAGAGCAACCAGTTCTTGTCGTTTTCCAACAGTTCATTTGAAGGTCAAAGGGGGAACCTACTGTATTTGTTAGAAATATCACTGAATCTACTTTGCTTTGGCTTTGGAAAATAG More
Protein seq	MNYTHRCLHSHKLPLLILLIAIVVILIQPYSIHAAANSSNTTIRCLTSQSSALLQLKSSFHDASRLSSWQPDTDCCRWEGVTCRMASGHVVVLDLSDGYLQSNGLHPALFNLTLLTNLALSGNDFMGAQLPDSGFERLSKLVSLDLSATNFAGQIPIGIGNLSNMLALDLSHNPNLYLTEPSFQTFIANLSNLRELYLDEMDLSSSGATWSSDVAASAPQIQILSFMSCGLSGFIDPSFSRLRSLTMINVRLNVISGMVPEFFANFSFLTILELSGNAFEGQFPTKIFQLKRLQFIDLYWNNKLCVQLPEFLPGSRLEVLDLILTNRSNAIPASVVNLKYLKHLGLTTVEASMNSDILLIRELHWLEVLRLYGGSGQGKLVSFSWIGSLKHLTYLELGNYNFSGLMPSSIINLTNLTSLTLYNCSMSGPIPSWIGNLIQLNNLNFRNNNLNGTIPKSIFALPALQSLYLDSNQLSGHLEDIPVPLSSSVYDIDLSNNWLHGPIPKSFFCLPNLEYLNLESNHLTGIVELRPFWRLRSLYFLGFSNNKLSVIDGEDSPSQYLPKIQHLGLACCNLTKLPRILRHLYDILELDLSSNKIGGVIPGWIWEIWKDTLGSLDLSNNAFTSLENSPSLVTFTHLSHLNLSFNRLQGEIPIPAISLPYGVVVLDYSNNGFSSILRTFGRYLNKVAYINLSKNKLKGYVPISICSMKKLQFLYLSDNNFSGFVPSCLVEGRSLRVLNLRGNKFNGMLPKGIKEGCKLETIDLNSNQIEGRLPRTLSNCKSLELLDVSNNHILDLFPLWLGNLPKLRVLVLRSNQLYGTIKGLHNSDLTRDHFSSLQILDLANNTLSGQLPPKWFEKLKSMMANVDDGQVLEHQTNFSQGFIYRDIITITYKGFDMTFNRMLTTFKAIDFSNNSFVGVIPGTIGSLVSLHGLNMSHNNFTGAIPQQLGNLAQLESLDLSWNQLSGVIPHELTFLTSLSWLNLSNNNLTGRIPQSNQFLSFSNSSFEGQRGNLLYLLEISLNLLCFGFGK More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.594768	0.823849	0.519105

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_01g0162800	RBH	0.369198	0.466939	1.049860
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os01g06876	SBH	0.227791	0.118750	0.0
Nipponbare \| IRGSP 1.0 \| RAP-db	Os01g0162800	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_01g0004530	RBH	0.0	1.509433	0.000000
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_01g0004220	SBH	0.000000	0.0	0.000000
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_01g0004510	SBH	0.072213	0.764565	1.948779
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_01g0012100	SBH	0.381584	0.863463	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_01g0012200	SBH	16.795937	24.858669	37.170464
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_01G0056800	SBH	0.10463	0.270119	0.10602
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_01g0004250	SBH	0.024807	0.015142	0.051441
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_01G0163600	SBH	20.9896415	29.601054	63.4595795
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_01g0004070	SBH	0.067293	0.000000	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_01g0004320	RBH	0.105607	0.975155	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_01g0012120	SBH	5.845068	31.972692	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_Ung0002000	RBH	0.059400	0.0	0.166089
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_01g0012090	SBH	0.687408	10.825159	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_01G004350	RBH	0.072881	0.481987	0.494161
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_01g0004240	RBH	0.000000	1.917465	0.922602

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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