Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os09g19136 OGI:09034040 | 16/16 Nipponbare | IRGSP 1.0 | MSU Chr09:11417020-11423570
Gene Symbol D305, OsD305
DNA seq

ATGCAACCGGATCTGGGAGGGAAGGGGAGGGGAGTGAAAGGGCCGCCGTCGGCCGGATCTGGGGGGTGGGAGCACCGCTGCCGACCTCCTTCCTCCGCCGCTGCATGCCGCCGCCGCCGCCGCACGGCCGTGCCCCGTCACCGTCCGCCCCGCGCCACCGGCCGGCGGCCTCCCCCTCCCCCCCCCCCTCTAGCCAAATCTGGGAGGGAAGGAGTGAGGGGAGCCGCCACTGCCTTCCCCCTTCCTCCGACCAATGCGTCGGGGTGCAACGCAGCCGCCACCGCCTGGTAGCCGCCTCCAGCCGAGGCGGGAGGGGGGAGGGAGAGGTGGGAGGGGAGAGAGGTAGAGGGACTTAGAAAATTTTGGCTGCGTGGTAGTTTTTAAGATGCTTTTATCAAATTTTGGCTGCGTGGCAGTTTTTAAGATGCTTTTATCTTTTTGTAGACGGGTCACTTAATAGGTCCGCCTGCAAAAGTACCTTTATTTTTGCATGCGGACCTCTTAAGAGATCCGTATGCGAAAATCTATTTTCACAGGTGAACAACTATCTCATCTCACGGTTGTTATTTTCGTAGGTGGCCATTTAGCTTCGAAAGATCTACCCGCCTAAAAAAATGCTTATGTTTGGAAGAATAGTTTTTTCTAGTATAGGTTATTTATGAGTTAAGTGATTTGTTTAACCATCGTCAGCCAACTAAACTTGCGCAATAAATAGATCGACAAAATATGAACGATATAAATGAAATCTGCAACTCTAGTATAATAAAGTTAAGGAAACATTTACTGTAATAATTTTAAATGAATTTTCATACTTTTCTAGATTAAAATTTATTGTTTCATATATATATTAGTAATATCTACATTATTCGAAAAAAAAGTTTGAAACAATCAATAGTTCTTTTTGGAAAATAAAGATCAACATATGGGTTAAGGTCTCTACAAATGATATGTATTACCTCTTTTCAGGTACCCAAACGATACACATGACCGTTTCTGGTGGTCACAAGTTTACATCGATATCACGCCGTCGCATAACATCTCTACAAATGATACCCGCGGTATGAATTACTACTCAAATGACTACATCTATGTTCCGGAAGACGTCCTCCGGACCGCGGTCACCACGTCCGCCACTTCTGTCCCTCTCAACATCACTCAATCACCAAACTGGCCGACCGATTGGACCTACTTTCACTTCCTGCACTTCGCCAACTTTGAGCAGCAGCTACGTCAATTAGACATATATTACGGCAAGAACAAGTGGGAATACAGCCCGCTAAGTTTGTCTTCCATGCAGCCAACATACAGCCCGATTGTTGCCAGTTTGTGTAACATCTCAATAGTCGCCACCAACACCTCCGTGCTACCACCCATGCTCAATGCCATCGAGATATACTTTGGCATCCCACGTAACGACAGCGCCACCTCTCCAGACGATGGTAACATATATATGCCAAATATTAATTATATATTCGTGTAATTTAGCTACTACTTCCGTAAGACCGTAACTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATGGGCCTGATTATATTAATTAAGAAAATAGATTGTAAAAATGTTGTTATATGCAAGACCACCGATACCTTCCCAAAATTTCCTAGCTTGCGTAATTTACTGCCTTGCAGGCTTTAAATTTCTGCCGGGCTCTTGACACCTTAATTACTGGAAATTCCAAAGGGTGTGCAAAGGCAAAAATATTTATTCAGAATTGACCAAAAAGTCACAATATGCATGACATCAAAATCTGAGGAAAATAGCGAGCATAAAAGAGCATTAAAATTAGCTTAAGAACATAAACAATATTTTAGACGTCTGTTGTCTATAAAATATTTCCATGTCATATTTATAGGGAGAACTTGTATGTTTAACTATTTAACATATATAGACACATATAATTAACGATTTTATTCTGTAGACAACCTATACAAAGATATGTGTGATGTTAAACTGTCCATTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATCTAGGCAGCTGCTCACCTTCGTTTCTTGCTGAAGTTAAACACGGTGATCATCCATGACTGCTAATTTAGAAACTGATAACTTCAAAAGGGATTGAATAACAAATTTAGAAAACAATATCATCACATGGAGTTAGTAAGAGCAATCATAAAAAGGTTATAACAATTTACAGGTTACAACAATACCAACTGTTTGCATGATAAGTTAGTAAGAGAAACCACGAAAGGTATACACTCTTTTAACATTTTGCGAATGGAGAGACTTCAGTGCAAGTTAACGTGTCATATATTAGGAGGTATAACTAAGTATGTGGCACGCGTGTATACTTCCCTGCTTCACAATGTATGACCATTTTCTTCAGAAATTTAGTCATCTTAATCTTTAACCACTACATACTCCCTGTTTCACAATGGTTGGCCATTTTTCCATAAATTTAGTGATCTGTGCGCATGGTGGAAATGAGAAAATGGAGTAACAGCCTCTGCCATTTAGTATATTTTACAAGCCTACACAAAGAAATTAAAATAATTGAGCTCACATCTAAAGATGATGAGCAACTTGCAAGTGCATTGTAAATTTGTGATATGCATCTACTAATCTTTTTAGTGGCCATGCAGGCAACAAAGCGGTTATCCAGACATTCAGATGGTGTGATCGAGTAAGAATTACACTTGAAGCCGCACAAGGTTAATTTGGGAAAACCACCTGCCTCCCTGCATTTCATCACTTTTTCCCCAGTACATATCTAACATACCAAGCTACACTGAACATGCATTTTTTTACGTAGGTTTGGACTATTTGCACACAGGATGTGTACTACCAATAATTCACAGAGACCTGAAGTCACACAACATTCTTCTAGGACATGACATGGTTGCCAAGATCTCAGATTTCGGACTGTCCAAGTCCTATTTCGATGTTGCACAAAGTCACATATCTGTCTCAGCTGCTGGAACTATAGGCTACATTGATCCAGAGTTTGTTCCTATACCCATTTTATTCCATAATTAACTTGAATTTATTAAAAAGTTAAAGGATTTTTTTATAAAAAGATATCTTGCTGCATTTTGTACTTAGTTACAAAACAGATTAGCAGCTCTGATGAAACCAGCTAACTGGGAACATTGATTCAACTGTTTCAATCCAGGTATTGCCTTAGTTGCAGACTCACCACAAGTAGTGACGTCTTCAGCTTTGTAGTATTGCTAGAGATTGTAACAGGCGAACCTCCAATTGTGCCAACCACCGTGCACATTTTTGCAGCGTGTAAAGGAGAAGGTTACTACAGGAAATATTGAGGCAATTGTTGACCCACGACTTGATGGTGACTACGATGTAAGTTCAATCTGGAAGGTTGTGGACATAGCGCTGTTGTGCACAAAGGAAGCATCTGATGAAAGGCCAACAATGAGTATGGTGGTTGCACAACTAAAGGATGCCTTGGCATTGGAAGAAGCCCGTAATGTGAGTATCAGCGATATTAGCCAAAAGGGTGCCAATCTTGGCTTGTCGTTCAACTCGATGCCATCAGCAAGATGAAAGAGCATGCTCAAGTGGTTAAGTATGTCACATAGTTAAACTTTCTTATTGAGTGTATTAACTATTGTAATAAGCATGGAGTTGTGTCTTCCTTCTGGAATTACAATTACATTGCTACTTGATGAGTTGAGGAATGTATCAATGACTCGATGAGTTCCTATCCTGTGCTAATATATGACATTCTGGACCAGATCCAATCAAAGTTCTGAAATGTTGACTATCAACAAATTTTAAATATTTAATTTGAAACATAAAGATGGAATGTGCATATTTTTCTTGCAGTAACTTCATAATCTCATACTAGATTTTATAAACTTATCTTAGTAAAATATAATTATAGCCAAAGTCGTCGCACATCGAAGATCATAAACTATATACCGAGACCGAGTACCAAGGTTTTGCTTTGTTGGGTGATGTGTTAAGAGAACAATTTAGAATGAAATCAGCAAGCAAAGTAGTATCTCATTACCATGATTCCAGCTTCTGAAATGAGGAACTAACATCCTGCGCGTTCTTGCGTGACAACAGATCTGCCCAAACTGGCAAGCAGATCCAACGCCAGGAACAAACAACCTGGAAGGAATTAGTCCGGATGAATAATCCTGCGTTCCAAGGAACAAGTACACGCCCACAAAGAACATTCAGTACCCAAACATTTACCTCAAGAACGCTTGACCGTCGTTCGGATCGTATTACGGCGGTGGCTGCTCAAATCTCAAAGGGCGGCGCCTGCGATGGCGCGGTCGGAGCTCGTACGTGAGCGTGGTCGATCCAGGAAGTGGGTAGCATGCGGGGGGAGCAGTGCCGAAGGTGGAACTCGACCGAAGTCGCGCACGCGGTGGCGGCAGCGGCGGCGGCGGCGTCGGCGGCGGCAGGATAAGAGGTTGCGGCCGTCGAGCTCGTCGGACTTAAGCTGGGCCGTAACTGTGTTGCAACTTGATGTGTGGGCCAGCATATAATGTTTTGGGCCCTTTGTTATGGGCTAAACTATTATTATAGTTGGGCCGGAGCGAGATCGTGGGTGACGTGAGGACCCACTTGGAATAAGTTCGCTTTGTGACCCTCAAAAGTAATCGAAATCTAATTTGTAACCCTAAACCACAAAACCAGATATTTCGACCCCCAAACTTTCAAAACCGATGCAATTTGACTCCCTCGGCGGTTTTGGAAGGTGGTTTCATTGACGTGGCGCCTACGTGGCAGTATTGACTTGTCTCCTTTCCACGTGGTGTTGACGTGGCGTTTAGGTGGCATTAGAAATAAAAAATATGTGTGAGACCCATTTGTCATTTATCAAAAGTATATGTGGGTCCCACTAGCTAGCTCGATCAATATAAAGAGCAAACCATGCATTCATCAAATCACATCGGATTACCACACTAATCACGATTAGAGTAACAAAACTCACGTTGATACACGATACACCATGTCGCCGCAGGCCAAATCCAAAGGCAAACCGCTTCTCTTGGTGGTCATCTCCTTCCTCTCCGTGTTGCCATGGCACGCTAGCAAGCGGCGGCGGCAAGCCCCTCGTCACTGGCATCACCAAGGACGGCGCCACCAAGCTCTACACCATCGTCGTCAAGGACGGCCACCCCCTCGCCCTCGACCTCTCTGGCGAGCTCGTCTGGTCGACCTGTGACGCCTCCCGCTCCACCGTCCTTCCCTACGAGTGCGAGTGCGTGGAAATCATCCTCTCTTCATCTTTATGGGGCCCACATAAAGCAAGGAGACGGGGAGGAGGAGGAGGAAGGGCGGGGTCGAGCCATGGCTGGTCCATCAACTTCGGTATCTGCCGCCCCAATCTCTTCCTCCACTGGCTCCTCCGGTCCTCCTCGCGCGCCAATTTGTATCGCCACCGCCGGCCAGCTCTCGAGATCATCGTCCTGGCTACGGCTGGCGTGACCGAGGAAGAGGAGGAGACGACGAAGCCGGCAATGGCCTTACTGAGACTCAGCGACGTCTAG

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CDS seq

ATGCAACCGGATCTGGGAGGGAAGGGGAGGGGAGTGAAAGGGCCGCCGTCGGCCGGATCTGGGGGGTACCCAAACGATACACATGACCGTTTCTGGTGGTCACAAGTTTACATCGATATCACGCCGTCGCATAACATCTCTACAAATGATACCCGCGGTATGAATTACTACTCAAATGACTACATCTATGTTCCGGAAGACGTCCTCCGGACCGCGGTCACCACGTCCGCCACTTCTGTCCCTCTCAACATCACTCAATCACCAAACTGGCCGACCGATTGGACCTACTTTCACTTCCTGCACTTCGCCAACTTTGAGCAGCAGCTACGTCAATTAGACATATATTACGGCAAGAACAAGTGGGAATACAGCCCGCTAAGTTTGTCTTCCATGCAGCCAACATACAGCCCGATTGTTGCCAGTTTGTGTAACATCTCAATAGTCGCCACCAACACCTCCGTGCTACCACCCATGCTCAATGCCATCGAGATATACTTTGGCATCCCACGTAACGACAGCGCCACCTCTCCAGACGATGGCAACAAAGCGGTTATCCAGACATTCAGATGGTGTGATCGAGTTGTGGACATAGCGCTGTTGTGCACAAAGGAAGCATCTGATGAAAGGCCAACAATGAGTATGGTGGTTGCACAACTAAAGGATGCCTTGGCATTGGAAGAAGCCCGTAATCCAAAGTCGTCGCACATCGAAGATCATAAACTATATACCGAGACCGAGTACCAAGCAAGCGGCGGCGGCAAGCCCCTCGTCACTGGCATCACCAAGGACGGCGCCACCAAGCTCTACACCATCGTCGTCAAGGACGGCCACCCCCTCGCCCTCGACCTCTCTGGCGAGCTCGTCTGGTCGACCTGTGACGCCTCCCGCTCCACCGTCCTTCCCTACGAGTGCGAGTGCGTGGAAATCATCCTCTCTTCATCTTTATGGGGCCCACATAAAGCAAGGAGACGGGGAGGAGGAGGAGGAAGGGCGGGGTCGAGCCATGGCTGGTCCATCAACTTCGGTATCTGCCGCCCCAATCTCTTCCTCCACTGGCTCCTCCGGTCCTCCTCGCGCGCCAATTTGTATCGCCACCGCCGGCCAGCTCTCGAGATCATCGTCCTGGCTACGGCTGGCGTGACCGAGGAAGAGGAGGAGACGACGAAGCCGGCAATGGCCTTACTGAGACTCAGCGACGTCTAG

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Protein seq

MQPDLGGKGRGVKGPPSAGSGGYPNDTHDRFWWSQVYIDITPSHNISTNDTRGMNYYSNDYIYVPEDVLRTAVTTSATSVPLNITQSPNWPTDWTYFHFLHFANFEQQLRQLDIYYGKNKWEYSPLSLSSMQPTYSPIVASLCNISIVATNTSVLPPMLNAIEIYFGIPRNDSATSPDDGNKAVIQTFRWCDRVVDIALLCTKEASDERPTMSMVVAQLKDALALEEARNPKSSHIEDHKLYTETEYQASGGGKPLVTGITKDGATKLYTIVVKDGHPLALDLSGELVWSTCDASRSTVLPYECECVEIILSSSLWGPHKARRRGGGGGRAGSSHGWSINFGICRPNLFLHWLLRSSSRANLYRHRRPALEIIVLATAGVTEEEEETTKPAMALLRLSDV

Function Chitinase CLP [UniProtKB/Swiss-Prot:Q8S1V1]

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os09g19136 LOC_Os09g19136.1 Chr09 11417020 11423570 + MSU_osa1r7
CDS seq

ATGCAACCGGATCTGGGAGGGAAGGGGAGGGGAGTGAAAGGGCCGCCGTCGGCCGGATCTGGGGGGTACCCAAACGATACACATGACCGTTTCTGGTGGTCACAAGTTTACATCGATATCACGCCGTCGCATAACATCTCTACAAATGATACCCGCGGTATGAATTACTACTCAAATGACTACATCTATGTTCCGGAAGACGTCCTCCGGACCGCGGTCACCACGTCCGCCACTTCTGTCCCTCTCAACATCACTCAATCACCAAACTGGCCGACCGATTGGACCTACTTTCACTTCCTGCACTTCGCCAACTTTGAGCAGCAGCTACGTCAATTAGACATATATTACGGCAAGAACAAGTGGGAATACAGCCCGCTAAGTTTGTCTTCCATGCAGCCAACATACAGCCCGATTGTTGCCAGTTTGTGTAACATCTCAATAGTCGCCACCAACACCTCCGTGCTACCACCCATGCTCAATGCCATCGAGATATACTTTGGCATCCCACGTAACGACAGCGCCACCTCTCCAGACGATGGCAACAAAGCGGTTATCCAGACATTCAGATGGTGTGATCGAGTTGTGGACATAGCGCTGTTGTGCACAAAGGAAGCATCTGATGAAAGGCCAACAATGAGTATGGTGGTTGCACAACTAAAGGATGCCTTGGCATTGGAAGAAGCCCGTAATCCAAAGTCGTCGCACATCGAAGATCATAAACTATATACCGAGACCGAGTACCAAGCAAGCGGCGGCGGCAAGCCCCTCGTCACTGGCATCACCAAGGACGGCGCCACCAAGCTCTACACCATCGTCGTCAAGGACGGCCACCCCCTCGCCCTCGACCTCTCTGGCGAGCTCGTCTGGTCGACCTGTGACGCCTCCCGCTCCACCGTCCTTCCCTACGAGTGCGAGTGCGTGGAAATCATCCTCTCTTCATCTTTATGGGGCCCACATAAAGCAAGGAGACGGGGAGGAGGAGGAGGAAGGGCGGGGTCGAGCCATGGCTGGTCCATCAACTTCGGTATCTGCCGCCCCAATCTCTTCCTCCACTGGCTCCTCCGGTCCTCCTCGCGCGCCAATTTGTATCGCCACCGCCGGCCAGCTCTCGAGATCATCGTCCTGGCTACGGCTGGCGTGACCGAGGAAGAGGAGGAGACGACGAAGCCGGCAATGGCCTTACTGAGACTCAGCGACGTCTAG

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Protein seq

MQPDLGGKGRGVKGPPSAGSGGYPNDTHDRFWWSQVYIDITPSHNISTNDTRGMNYYSNDYIYVPEDVLRTAVTTSATSVPLNITQSPNWPTDWTYFHFLHFANFEQQLRQLDIYYGKNKWEYSPLSLSSMQPTYSPIVASLCNISIVATNTSVLPPMLNAIEIYFGIPRNDSATSPDDGNKAVIQTFRWCDRVVDIALLCTKEASDERPTMSMVVAQLKDALALEEARNPKSSHIEDHKLYTETEYQASGGGKPLVTGITKDGATKLYTIVVKDGHPLALDLSGELVWSTCDASRSTVLPYECECVEIILSSSLWGPHKARRRGGGGGRAGSSHGWSINFGICRPNLFLHWLLRSSSRANLYRHRRPALEIIVLATAGVTEEEEETTKPAMALLRLSDV

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.086435 0.000000

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_09g0349600 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os09g18540 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os09g0349600 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_09g0007060 SBH 0.0 10.680312 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_09g0007060 SBH 0.171008 6.705332 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_09g0007300 SBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_09g0007160 SBH 0.000000 0.000000 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_09g0007240 SBH 4.377649 0.000000 6.404025
Minghui 63 | MH63RS3 | HZAU OsMH63_09G0198700 SBH 0 0.5887 1.266588
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_09g0007270 RBH 0.0 0.0 0.364297
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_09G0176200 SBH 0.623677 1.0631815 2.3892725
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_09g0007180 SBH 0.000000 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_09g0007040 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_09g0006760 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_09g0006940 SBH 0.000000 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_09g0007020 SBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_09G007550 SBH 0.019716 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_09g0007350 SBH 0.000000 0.000000 0.000000
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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