Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os09g0349600 | OGI:09032520 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr09:11022699-11026059 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTGTCTATATACCATCCATATATGTTTAACTGTCTACAGTACTTTCCCCAAATTTCTTCCTCTCCGGCCCCTCTTCCCCTTCGATTCCGGCGGCTAGCCGTCGGCGAATGTTGGAGGAGGGGTCCGGCCACCTCCCCCTTGCTTGTATTGTGTTTCTAGGTTTGTTTTTAGGTCGTCAGGTCTCTCCTGTAGTTAGGGTTTGTCCCTAGTTGGTACTTTTGGCCGGCGAGCTCCATGGGCGCTGGTGTGGTAGGCGGCGGCGGCGGTTGGTGACGGTGGAGGTGTAAGATCAGTAGACTTGTGGATGAATCGACGGTTGGAGCTGGCTCCTTGCGGCGGCGGCGGCTTCGTCGTCTGTGGCCGCGGCGTCGGCTTCTTCGTCGCCTGTGGCCACAGCGTCGTTTGCTTCGTCGTCCGTGGCCGCAGCGTCGGCTGCTTCGTCGTCCGTGGCCGCGGCGTCGCCTGCTTCGTCGTCAGTGGCCGGGAGGTCGTCGCCCCTTCCCGTGCGATGGCTGCGGTGATTTCTCATTGCTTCCGTCGTCCGATGCTGTCGTCGCCCAGAGCATGCTGCTCGTGGTGCTTGATGACAACCCGTCGGCGTGGTGGCGGCGATTTCACTGGTACCTGTTCGAGAGCTCCCAATGCTTAGGTTCCGTTGGTCATGATTCGCAGGATTTCTCTTCCCCATCCCTGTATGTCGACCCAAAAAGACAGCAGTTCGTATGCCACCATTCGAGTTTTTCAGTGGGTTTGGGGATGTGGATTTGGGCTCCTTCTTCCTATATGTTTCCTACCAGCTTGTTCCATGCATGGTTTGTTGTTCGGGTTGAGCTCACGCTCCTCAGATTTAACGACGAACTCCGTGGACACCACTTGCTGAGTCTGGTGTTGCCTACTCTAAAATCTACGGCTCAGCAGCAGACCTCCGTTTTGTGCAGTATTTGTGGAGTCAACCGGATGGGGATTACCGGTTTGTCAAGCGGGCTTCATGCCGAAGGAGGCCCAAGGTTGCATTCGTCGCGGCATTGCCGCAACTCCCTGTCGATGTGCATCTTATCTGCTGTGTGGTTTCATTATGAAGTCTGTAGCCTTATTGCAGGTTTCCATTCTTTAGAAACGGATGGTTTTATGCTCTCTTTTTATCTATTTGGCAATGTACTGGGATTTATTCCCATGATCTCTGTCGGTTTATATTAATGGATGTTTAGTTTTCAAAAAAAAAACTGTCTATATTTATCTATGATTTTGTTGTGTATTTTCTTTTACCTTTTTTTTCATTTTACATAGGTATCCGGGTGATCAATATGACCGGTTCTGGTGGCAGCTAGGATACAGTAGCCCGACGTGGAAGAACCTTTCCACTGTTTCGGCCATCACGCAAGATTCCATCTACACTGTGCTCTTGACCATTATCCAAACTGCCGTTGAGGCAGTCGGCAACAACACGATGCTGAACATTACATGGCAAGATCAAACGCCTCGTGGTCGTGGCTTGAAGTTTTTCATGTACTTTGCTGACTTCCAGAACAGCCAGCTTCGGCAATTCAATGTCTCCTTCAACGACGTTGAGCCATACCAGTACAGTCCACCGTATCTAACCACCGGTGTCTTATATAACTCTGGATGGTCAACTGCCACCGATGGCAACTACAACATCAGCCTAGTGCCTACGGCTGCGTCCAAGTTACCGCCGATGATCAATGCCCTAGAGATCTACACTCTCATTTCCCATGACAATCCAACGACATTCCCAGTGGATTGTAAGCATTCTCCTCTATCATATACTCCACTCTATTTTCTCTGATTTAGTTGATATTTTTCTTATACAGAAACTTCCATACACGTTATATTTCAGATAAACTTGACTACTTGCTATCTCATAAAATTCTTAGAAATTTTACAACTGAGATTTTTTCTTGGATCAGTGTGTTCTTAATATGTGTAAATGTTTCAAGGTTTTGTGCTTGTTTTTATTTTTTAAATTTGCGATGTGGAGGAATTGAATCAAAATTTATCCTCAAACTTTCCTTGTTTGGCCCATGCTAGTTGAAACCATCATGGCAATTAAACTCGAGTATGGGATAAAGAAGAATTGGATGGGTGATCCATGTTTCCCTGAAAAATTTGCTTGGGAAGGCGTAAAATGCAGCAATTCAAGTAGTAACACAGCGAGGATCATCTCTTTGTAAGTATAACTTGAAATTCTATCACCAGTATTATGCTCGGAATTTGTGCTTGGGACTTATGTTGGATCACCTAAAAATTTACATGCAGGGATCTGTCCAACAGCAACTTGCATGGAGCTATATCTAATAACTTCACATTACTCATGGCACTCGAATATTTGTACGTATCTAAACAATTCATTTTGTTTCTAAAGAGGCATATTTGATATATAGCTTCTTTTTAATTAACTTATTCTTTCAAGTCTATACGTATATATATCTTTTGACCAAGATCTAAACTACGGTATACATACTTGGCTTCCTAGGGCCCTCTCATGTGTCATTACTTCTCAATCAAATAGAACAAAATTAGAAATGAAAATGATGCAGAAAAAAATTCACAATAAAGACAGATAATCCCAGGTGACGTGGTGTCGTAAATCACGCTGTGGGTTATTATAATCTACTTATTCTTGCATTTTATACGCGCTTGAAATAAGTGCATAAACATATATAGTGTCAGGGATTTACCTCATGCTCGCCCCTTTATAATTTGTTATTAAGGAATTATATTACTATATTTAAACAGCGCTAGACATATTACTGATATCATAAACTTCGTGAAACCACAGGAATTTGTCATGCAACCAACTGAACGGACCAGTCCCTGACTCTCTACGTAAAAATAACACAGGATCATTCATTTTCAGGTTTGGGGCCTTATTGGTGTTAATGTTTCTCCGTAATGTATCCAAGTTACAGAATGTAGTTCATTTTTTTTCTGTGAACTTTGAGCTGGTGGTCATTATTGAAGACTGTGTTTTCCTTTTGCACCAAAGAATACCATGAACTGACTGTCTTATTTGATTTCAGCTTCAATTCTGATGGAAATATGTGCAACAAACCAATAATAGTCCCATCTCCGCCAGGAAAAAGGTCAAATAGAGCAGCTACCTTAGCTATTTTGATAGTGGTCCCTGCGACGGTGATTGTTGTTCTTGTTCTTGTGTTTTTGATCTGGAGACAGAAAAGAAACTCCAACTGTACGTATTCTCTGCTATTGTTAATTTGTTATGAACTCAATAAATTTATTAACCATTCGGGTTGGTGGTATATACTTTATGATGACTTATTATGTAATTTATACTTGATATGATTTTCATGTAACTGCTATTGTTGTTACCAGATTCTACTGA
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| CDS seq | TTTTGTTGTGTATTTTCTTTTACCTTTTTTTTCATTTTACATAGGTATCCGGGTGATCAATATGACCGGTTCTGGTGGCAGCTAGGATACAGTAGCCCGACGTGGAAGAACCTTTCCACTGTTTCGGCCATCACGCAAGATTCCATCTACACTGTGCTCTTGACCATTATCCAAACTGCCGTTGAGGCAGTCGGCAACAACACGATGCTGAACATTACATGGCAAGATCAAACGCCTCGTGGTCGTGGCTTGAAGTTTTTCATGTACTTTGCTGACTTCCAGAACAGCCAGCTTCGGCAATTCAATGTCTCCTTCAACGACGTTGAGCCATACCAGTACAGTCCACCGTATCTAACCACCGGTGTCTTATATAACTCTGGATGGTCAACTGCCACCGATGGCAACTACAACATCAGCCTAGTGCCTACGGCTGCGTCCAAGTTACCGCCGATGATCAATGCCCTAGAGATCTACACTCTCATTTCCCATGACAATCCAACGACATTCCCAGTGGATTGTAAGCATTCTCCTCTATCATATACTCCACTCTATTTTCTCTGA
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| Protein seq | FCCVFSFTFFFILHRYPGDQYDRFWWQLGYSSPTWKNLSTVSAITQDSIYTVLLTIIQTAVEAVGNNTMLNITWQDQTPRGRGLKFFMYFADFQNSQLRQFNVSFNDVEPYQYSPPYLTTGVLYNSGWSTATDGNYNISLVPTAASKLPPMINALEIYTLISHDNPTTFPVDCKHSPLSYTPLYFL |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At1g51810 [UniProtKB/Swiss-Prot:Q9FZB8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os09g0349600 | Os09t0349600-01 | Chr09 | 11022699 | 11026059 | + | irgsp1_rep | ||
| CDS seq | TTTTGTTGTGTATTTTCTTTTACCTTTTTTTTCATTTTACATAGGTATCCGGGTGATCAATATGACCGGTTCTGGTGGCAGCTAGGATACAGTAGCCCGACGTGGAAGAACCTTTCCACTGTTTCGGCCATCACGCAAGATTCCATCTACACTGTGCTCTTGACCATTATCCAAACTGCCGTTGAGGCAGTCGGCAACAACACGATGCTGAACATTACATGGCAAGATCAAACGCCTCGTGGTCGTGGCTTGAAGTTTTTCATGTACTTTGCTGACTTCCAGAACAGCCAGCTTCGGCAATTCAATGTCTCCTTCAACGACGTTGAGCCATACCAGTACAGTCCACCGTATCTAACCACCGGTGTCTTATATAACTCTGGATGGTCAACTGCCACCGATGGCAACTACAACATCAGCCTAGTGCCTACGGCTGCGTCCAAGTTACCGCCGATGATCAATGCCCTAGAGATCTACACTCTCATTTCCCATGACAATCCAACGACATTCCCAGTGGATTGTAAGCATTCTCCTCTATCATATACTCCACTCTATTTTCTCTGA
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| Protein seq | FCCVFSFTFFFILHRYPGDQYDRFWWQLGYSSPTWKNLSTVSAITQDSIYTVLLTIIQTAVEAVGNNTMLNITWQDQTPRGRGLKFFMYFADFQNSQLRQFNVSFNDVEPYQYSPPYLTTGVLYNSGWSTATDGNYNISLVPTAASKLPPMINALEIYTLISHDNPTTFPVDCKHSPLSYTPLYFL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0349600 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g18010 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0348600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0006810 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0006820 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0007020 | RBH | 0.0 | 1.827620 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0006890 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0006990 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0192300 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0007050 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0168700 | RBH | 0.006404 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0006890 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0006760 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0006730 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0006640 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0006710 | RBH | 0.0 | 1.307105 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G007190 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0007060 | RBH | 0.0 | 0.000000 | 0.0 |
