Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os07g44130 | OGI:07038620 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr07:26375648-26377640 | ||||||||
| Gene Symbol | CYP709C5, OsCYP709C5 | ||||||||||
| DNA seq | ATCACTCTCTCAGCAAGACAGCAACCAGCTGTACCAAGCAAGCAGAACACGAACGGTTGATTGATTCAGGCGAAGAAATTCAGAACTTGTTCGATCTGCTGGCCATGGGTTTCGAGTGGACGGTGGCGACGGCCGCGGCGGCGGTGGCGGCGTCGTGGGCGTTCATCGCGGTGGTGGTGAAGCTGGTGTGGTAGCCCCGCGCCATCACCAGGCGGCTGGGGGCGCAGGGCGTCGCCGGGCCGGGATACAGGTTCTTCTCCGGCAACCTCAGCGAGATCAGGCGTCTCCGCGCCGAGGGCGCCAACCTTGTGCTCGACGTCTCCTCCCATGACTTCGTCCCCATCGTGCAGCCACACATCCGCAAATGGATTCCCCTCTACGGTACGCCATGTTTCTGAGCTTTTTTTCTGATATTTGAAATCATCTACAGCATATAAACATATCCCTGTATATGTTTGCGTGTTTATGTGATGTAGGGAAGACGTTCTTGTATTGGTTCGGGACACGGCCAAACATATGCTTGGCAGATATGAACATGGTGAGGCAGGTGTTGTCGGACCGTACAGGGATGTTCCCCAAGTACATAGATAACATGCAGTTCGCACGCCTGCTTGGTAAGGGGCTCGTGCTCACCGACGACGATGAGTGGAAACGCCACTACAAGGTGGTTCACCCAGCCTTCGACATGGACAAGCTCAAGATGATGACGGAGACCATATCCGACTACGCCCAATCAATGATGTTTGAGTGGGAATCGGAGTTGGGGATGAAGGGCGGAAGCACGGAGATTGAACTGAGCCGGTGGTTTGAGGAGCTCACTGCTGATGTGATTTCGCGTACGGCATTTGGGAGCAGCTACAGGGAGGGGAAGCAGGTCTTCCTAGCACAGAGGAAGCTCCAATTTCTTGCCTTCTCCGTGTTTCTCACCATCCAAATCCCAGGGTTCAGCTACCTCCTGACCAAAAAGAATCTGAAGACATGGTCACTAGACAAGAAGGTGAGGAGCATGCTCATGAACATTATCAAGAGTCGACTCACTAACAAAGAAACCATGGGATATGGGAATGACCTGCTTGGATTGATGTTAGAGGCATGCGTGCCAGAGCATGGCGGGAGCCAGCCACAACTCAGCATGGACGATATCATCGCTGAGTGCAAGACCTTCTTCTTCGCTGGGCATGACACCACCTCGCAATTGCTCACTTGGACCATGTTCTTGCTTAGCACACACCAACATTGGATGGAGAAACTCAGAAAGGAGGTTAGGATGGTGTGCAATGACGAGGTGCCCACCGGAGACATGCTCAACAAGTTGAAATTGGTCAACATGTTCCTTCTCGAGACCCTAAGGTTGTATGGCCCTGTCTCACTCGTAACGAGGAGAGCTGGTACCGACGTCAAGCTTGGTAGCATCAAGGTTCCTAAGGGCACCATCCTAACGATCCCGATCGCAACAATCCACCGTGACAAGGAAGTGTGGGGGGAGGACGCCGATGAGTTCAAGCCAGAGAGGTCCGAGAATGGAGTGTTGAATGCAGCGAAGCACCCCAGCGCACTACTCTCCTTCTCTATCGGGCTAAGGTCGTGCATCGGGCAAAACTTTGCCATGATCGAGGCCAGGACCATCATCGCCATGATCCTGCAAAGGTTCTCCTTCACGTTGTCCCCTAAGTACGTCCACACGCCAATCAGTGTGATCACGCTAAGGCCTAAGTATGGTCTTCCAATGATCCTTAGGAGCCTCAAGGTAAAGAGAGATAGGTAAGATCCAAGGAATATCTTACTTACACTTCTTTTTTAGCACTGCTTTGTTGTACACGAGTAGTCTTGTTCACAAGAATTTGCTCCCTAATAATGTTATCGTGTAATGTACTGATATATTTCGGTTCTACAGAATTGGGATGTAAATTTTTCTAGTTTGCTTGTTGATTGGAGATAAGAAGTTTTCGTATTTCTAGCATATCAACCAATAAGTTTCTTGAGTCGATAAATA
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| CDS seq | ATGAACATGGTGAGGCAGGTGTTGTCGGACCGTACAGGGATGTTCCCCAAGTACATAGATAACATGCAGTTCGCACGCCTGCTTGGTAAGGGGCTCGTGCTCACCGACGACGATGAGTGGAAACGCCACTACAAGGTGGTTCACCCAGCCTTCGACATGGACAAGCTCAAGATGATGACGGAGACCATATCCGACTACGCCCAATCAATGATGTTTGAGTGGGAATCGGAGTTGGGGATGAAGGGCGGAAGCACGGAGATTGAACTGAGCCGGTGGTTTGAGGAGCTCACTGCTGATGTGATTTCGCGTACGGCATTTGGGAGCAGCTACAGGGAGGGGAAGCAGGTCTTCCTAGCACAGAGGAAGCTCCAATTTCTTGCCTTCTCCGTGTTTCTCACCATCCAAATCCCAGGGTTCAGCTACCTCCTGACCAAAAAGAATCTGAAGACATGGTCACTAGACAAGAAGGTGAGGAGCATGCTCATGAACATTATCAAGAGTCGACTCACTAACAAAGAAACCATGGGATATGGGAATGACCTGCTTGGATTGATGTTAGAGGCATGCGTGCCAGAGCATGGCGGGAGCCAGCCACAACTCAGCATGGACGATATCATCGCTGAGTGCAAGACCTTCTTCTTCGCTGGGCATGACACCACCTCGCAATTGCTCACTTGGACCATGTTCTTGCTTAGCACACACCAACATTGGATGGAGAAACTCAGAAAGGAGGTTAGGATGGTGTGCAATGACGAGGTGCCCACCGGAGACATGCTCAACAAGTTGAAATTGGTCAACATGTTCCTTCTCGAGACCCTAAGGTTGTATGGCCCTGTCTCACTCGTAACGAGGAGAGCTGGTACCGACGTCAAGCTTGGTAGCATCAAGGTTCCTAAGGGCACCATCCTAACGATCCCGATCGCAACAATCCACCGTGACAAGGAAGTGTGGGGGGAGGACGCCGATGAGTTCAAGCCAGAGAGGTCCGAGAATGGAGTGTTGAATGCAGCGAAGCACCCCAGCGCACTACTCTCCTTCTCTATCGGGCTAAGGTCGTGCATCGGGCAAAACTTTGCCATGATCGAGGCCAGGACCATCATCGCCATGATCCTGCAAAGGTTCTCCTTCACGTTGTCCCCTAAGTACGTCCACACGCCAATCAGTGTGATCACGCTAAGGCCTAAGTATGGTCTTCCAATGATCCTTAGGAGCCTCAAGGTAAAGAGAGATAGGTAA
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| Protein seq | MNMVRQVLSDRTGMFPKYIDNMQFARLLGKGLVLTDDDEWKRHYKVVHPAFDMDKLKMMTETISDYAQSMMFEWESELGMKGGSTEIELSRWFEELTADVISRTAFGSSYREGKQVFLAQRKLQFLAFSVFLTIQIPGFSYLLTKKNLKTWSLDKKVRSMLMNIIKSRLTNKETMGYGNDLLGLMLEACVPEHGGSQPQLSMDDIIAECKTFFFAGHDTTSQLLTWTMFLLSTHQHWMEKLRKEVRMVCNDEVPTGDMLNKLKLVNMFLLETLRLYGPVSLVTRRAGTDVKLGSIKVPKGTILTIPIATIHRDKEVWGEDADEFKPERSENGVLNAAKHPSALLSFSIGLRSCIGQNFAMIEARTIIAMILQRFSFTLSPKYVHTPISVITLRPKYGLPMILRSLKVKRDR |
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| Function | Cytochrome P450 709B2 [UniProtKB/Swiss-Prot:F4IK45] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os07g44130 | LOC_Os07g44130.1 | Chr07 | 26375648 | 26377640 | + | MSU_osa1r7 | ||
| CDS seq | ATGAACATGGTGAGGCAGGTGTTGTCGGACCGTACAGGGATGTTCCCCAAGTACATAGATAACATGCAGTTCGCACGCCTGCTTGGTAAGGGGCTCGTGCTCACCGACGACGATGAGTGGAAACGCCACTACAAGGTGGTTCACCCAGCCTTCGACATGGACAAGCTCAAGATGATGACGGAGACCATATCCGACTACGCCCAATCAATGATGTTTGAGTGGGAATCGGAGTTGGGGATGAAGGGCGGAAGCACGGAGATTGAACTGAGCCGGTGGTTTGAGGAGCTCACTGCTGATGTGATTTCGCGTACGGCATTTGGGAGCAGCTACAGGGAGGGGAAGCAGGTCTTCCTAGCACAGAGGAAGCTCCAATTTCTTGCCTTCTCCGTGTTTCTCACCATCCAAATCCCAGGGTTCAGCTACCTCCTGACCAAAAAGAATCTGAAGACATGGTCACTAGACAAGAAGGTGAGGAGCATGCTCATGAACATTATCAAGAGTCGACTCACTAACAAAGAAACCATGGGATATGGGAATGACCTGCTTGGATTGATGTTAGAGGCATGCGTGCCAGAGCATGGCGGGAGCCAGCCACAACTCAGCATGGACGATATCATCGCTGAGTGCAAGACCTTCTTCTTCGCTGGGCATGACACCACCTCGCAATTGCTCACTTGGACCATGTTCTTGCTTAGCACACACCAACATTGGATGGAGAAACTCAGAAAGGAGGTTAGGATGGTGTGCAATGACGAGGTGCCCACCGGAGACATGCTCAACAAGTTGAAATTGGTCAACATGTTCCTTCTCGAGACCCTAAGGTTGTATGGCCCTGTCTCACTCGTAACGAGGAGAGCTGGTACCGACGTCAAGCTTGGTAGCATCAAGGTTCCTAAGGGCACCATCCTAACGATCCCGATCGCAACAATCCACCGTGACAAGGAAGTGTGGGGGGAGGACGCCGATGAGTTCAAGCCAGAGAGGTCCGAGAATGGAGTGTTGAATGCAGCGAAGCACCCCAGCGCACTACTCTCCTTCTCTATCGGGCTAAGGTCGTGCATCGGGCAAAACTTTGCCATGATCGAGGCCAGGACCATCATCGCCATGATCCTGCAAAGGTTCTCCTTCACGTTGTCCCCTAAGTACGTCCACACGCCAATCAGTGTGATCACGCTAAGGCCTAAGTATGGTCTTCCAATGATCCTTAGGAGCCTCAAGGTAAAGAGAGATAGGTAA
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| Protein seq | MNMVRQVLSDRTGMFPKYIDNMQFARLLGKGLVLTDDDEWKRHYKVVHPAFDMDKLKMMTETISDYAQSMMFEWESELGMKGGSTEIELSRWFEELTADVISRTAFGSSYREGKQVFLAQRKLQFLAFSVFLTIQIPGFSYLLTKKNLKTWSLDKKVRSMLMNIIKSRLTNKETMGYGNDLLGLMLEACVPEHGGSQPQLSMDDIIAECKTFFFAGHDTTSQLLTWTMFLLSTHQHWMEKLRKEVRMVCNDEVPTGDMLNKLKLVNMFLLETLRLYGPVSLVTRRAGTDVKLGSIKVPKGTILTIPIATIHRDKEVWGEDADEFKPERSENGVLNAAKHPSALLSFSIGLRSCIGQNFAMIEARTIIAMILQRFSFTLSPKYVHTPISVITLRPKYGLPMILRSLKVKRDR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.310534 | 0.363384 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0635300 | RBH | 0.124761 | 0.522160 | 1.477277 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g25490 | SBH | 0.050227 | 0.227421 | 0.191141 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0635300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0024620 | SBH | 0.0 | 5.121840 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0024670 | RBH | 0.000000 | 0.000000 | 1.519489 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0024530 | RBH | 0.000000 | 8.664426 | 1.697673 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0024450 | SBH | 0.584457 | 0.422069 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0024580 | SBH | 3.806940 | 10.738488 | 12.961476 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0433000 | SBH | 63.9028055 | 47.0452215 | 96.268711 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0025110 | RBH | 0.156677 | 0.756884 | 1.095535 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0444600 | RBH | 20.8971815 | 9.7736715 | 10.0450955 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0024360 | SBH | 0.072798 | 0.508891 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0024500 | SBH | 0.210472 | 11.452056 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0024430 | RBH | 6.788849 | 9.310127 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0024600 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0024340 | RBH | 0.055726 | 1.310296 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G024320 | SBH | 0.229475 | 0.549071 | 1.238085 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0024350 | SBH | 0.000000 | 4.776464 | 5.837886 |
