Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsPr106_07g0024580 | OGI:07038620 | 16/16 | PR 106 | Os127742RS1 | Gramene(+IsoSeq) | Chr07:27368742-27392673 | ||||||||
| Gene Symbol | CYP709C9, OsCYP709C9, CYP709C5, OsCYP709C5 | ||||||||||
| DNA seq | atgggtaatttcgtgtggatggtggcggcggcggcggcggcggtggcgtcgtgggcgttcatcgcggtggtggtgaagctggtgtggaggccccgcgccatcagcaggcggctgcgggcgcaggccgtcggcgggccgggatacaggttcttctccggcaacctcggcgagatcaggcgtctccgcgccgagggcgccggcgtcgtgctcgacgtctcctcccatgacttcgtccccatcgtgcagccgcacttccgcaaatgggtttccctctacggtatgccgtgttttctgaggtttagtttttcgatattttaaaatgccatgagtaccaattattttaatttgttagctttTAtatatatatatatatatatatatatatatatttttgtgtgcttattatgtgttgtagggaagacgttcttgttctggttcggggcacaaccgaacatatgcttggcggatataaacattgtgaggcaggtgttgtcggaccgtacggggatgtaccctaaggacttaactaacccatacttcgcacacctacttggcaaagggcttgtgctcatcgatggcgacgaGTggaaacgccactacaaggtggtccacccagccttcgacatggacaagctcaagatgatgacggtgaccatatctgactgcactgggtcaatgatgtctgagtgggagtctgagttggggatgaaaggtggaagcgcggagattgaactgagtcagcggtttcaagagctcactgctgacgtgatctcgcgcacggcgtttgggagcagctatagtgaggggaagcaggtcttcctggcacaaaggaaactccagtttcttgccttctccatgtttctcaccatccaaatcccagggttccgctaccttccaactaaaaaaaacctaaagatatggtcactagacaagaaggtgaggagcatgctcacgaacatcatcaagattcggctcgctaacaaggacaccatgggatatgggaacgacttgcttggattgatgttggagacgtgcgcgccagagcatgacgaaagccagcagttgagcatggacgagatcattgccgagtgcaagaccttcttcttcggcgggcatgacactacctcgcacctactcacttggaccatgttcttgctgagcacacatccagagtggatgaggaagatcaggaaggaggtgacaactatgtgcggtgacgaagtgcccactggtgacatgctcaacaagatgaacttactcaacatgttccttctcgagactctaaggttgtacggccctgtctcactcatatcgaggaggactggcaccaatgccaaattcggtggcatcaaggtgcctgagggcaccatcctaaggatcccaatcgcaacaatccatcgtgacaaggaagtgtggggtgaggacgccgacgagttcaagccggcgaggttcgagaatggagtgtccaaggcagcgaagcaccccaacgcactactctccttctctaacgggccgaggtcatgcatcgggcagaatttcgccatgattgaggccaaagccgtcatcaccatgatcctgcagaggttctccttcacgttgtcccctaagtacgtccacacgccaattagtgtgatcacgctaaggcctaagtacggtcttccaatgatccttaggagcctcaaggtaaaaagagatctgtaagatccaaggaatgttttacttacactgcttttttagcaccgctttgttgtacacgagttgtcttgttcacaagtatttgcttcctaataatgttatcgtgtaatgtattgatatatatatttcagttatacaaaattgggatgtaaatttctctagtttgcttgttgattggatataagaagtttctctatttctagcatatcaaccaattagtctcttcagtcgagcaatatgatactttgtgagtccaatcaggccaaatggttgtcgacaatgtcatttacttgtcaatcaagacggaaaatagaatatacatgtagaaaaaaggagcaagtcttgaaagaaatgtaaaaattcaccacctaaaaaatcaatatattattaactaaagagcaactccctcccgtttgtgtatactataagtcgatttgacttttcctctagtcaaacttttttttaggtttagctaaatttatagcatagtttaacgatatctacaacatcaaattagtttcgttaaatatattattgtgtcgacggagtagatcacgactacggtatttgcagagtatggggatcgttggtgccagggtatacacgagattgagttaaaagagacggaaacaatgatttttatataggtttgggccccttatctctaaggtaatagccctagtcctattggccgaagccggtgTTGCtcttatttatcagaatcacacaagcacaatatttgggataaccaatctagtcgtcaacgacttggcggtatggaacaccacatgtagtcaatgacgaggtagtcttcctcctcgaatacgaacacggcgagatcagagatagcgctaaatatcttttgttggactctgaggcactagattgggtctgtctagatttatctccagcgtcgatgtttggtggcgtctattagtgtctattctgactgagcgtgtctattctagctaggcttgtcttagtcccccctagggagtcttgtatttatacctatagatgtcccattatctaagtagaaataggaagaccaatatggatatgatccgactagtcattgtagtttccatgtagagctctgcttctccttccttatccggaataccttcatatatgatgcatgattttgtataaaacttagTAtatggtaggcttcgccgagctcaacccaaaactattgggtatgccttgtacataacactgacacattgaatatattttgataatatgtttgttttgtgttgaaaatatagttatattttcataaacttgatcaaacttaaaaaagttttactAaaaaaaatcaaagtgatttataatataaaatggagggagtagaagattattcactttcttgatacatatgacgccatcgacttttaaacatcgttccacaattcatctcattaaaaaattaacctttagttataaaataggtcgcaacaaaaTaaataataattatgtaattttgtaaataacacgaatggtactattcaaatatgtagctcttatctaaaatcaggtgttcctctagttgaccGgaaaagtcacatgcagaagacaattaaggccaggttacaatgagacgaagggaaacaatgtttaaataatactccctccatctacttttgatagtcatatttcatcttgacacacagatcaaggataagtaattctacttatcatttaaacatgctactagttattcctcgtaaacaagcgattcattaatatttacatttctcgatgcccaggtagccaatcTtgtgtgtgagaatagagagtcacgcattaaatccaagaaagtcattaagaggatagattgttggattgaaatatgcctatcaaaaataaatttttcagatttagaaatatgactatcaaaaatagatggagggagtaaatagaaaagtttataaggttcacctactaggagagaaagggagacactgtttcaatagaagagtttataagatccagctactaggagagaaagggagactatttaaataaaaagtttataaggtccagctactaggagagaaagggagacaatgttttttttaaaaaaaaatgtttaatatgttattcattaaatagctcaaagAaacaaatacttcatatgctctgtttgtataaccggtgacttcagtgttgacttgcaactcgcaacagccacatctcaaaagaggtagggcttaTttggtttagtgccctattaaaataataatagtgttaaaatcttgataagttttaacgtgttataaagaaaaggtatgtttggattgatgttatttagaagtcaaattttgtatagtagtgaaggaagtttaataactatgccaaattaaacatttttattaccaacttattggattcaaaccaaactatctcatttactattcaaactatcaaaATatattttggtagacatgttttagcatcaatccgaaatgacctggtgtaccttttttagcgattggctcaacacggtcgtttgacagtgggcttaaaggaggcccaatacatgcgggagtcagcgaaagagcaccagaagaagcccatgccatcccattcggatcggcacatgctctcAaaaacggcccagtcgagccattcgtacaagccgccggcggcgagatttgttttacaacaattactacctaagccccgaaaagtaatttatggaataagtacgacataTttacaaacaaaaaataatttataaataaaacttctatatacgtgttcttagcgatctaagaggctaaaaaataaacttcgataaaaaaccacaaaatttgctctaaatttaaggttgaaaattcaaattttggcagataagcataagcataagcgaaaagatgaggcctccatctttgtgtctagataagcataaacataaacgaaaagatgaggcctccatctttgtgtcctccaaacgcgtacacttcagataaaaaagaaagttgttcagtttcaaatattagtttggcgctacataagtttctattttccgtgaatttaccgctagcacacgctacctatatattctcctgagttttcacttggtcattaattcgtgTtttgaggtcttttgccgaatggagtgtccaaagaagcgaagaaccctaatgcgttgctctccttctctagcgggccgaggtcgtgcatcgggcagaacttcgccatgttggaggcgaaggctgtcatcaccatgatcttgcaaaggttctcctttacactatcccccaagtatgtccacgcaccaaccagtttgatcacac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| CDS seq | atgggtaatttcgtgtggatggtggcggcggcggcggcggcggtggcgtcgtgggcgttcatcgcggtggtggtgaagctggtgtggaggccccgcgccatcagcaggcggctgcgggcgcaggccgtcggcgggccgggatacaggttcttctccggcaacctcggcgagatcaggcgtctccgcgccgagggcgccggcgtcgtgctcgacgtctcctcccatgacttcgtccccatcgtgcagccgcacttccgcaaatgggtttccctctacgggaagacgttcttgttctggttcggggcacaaccgaacatatgcttggcggatataaacattgtgaggcaggtgttgtcggaccgtacggggatgtaccctaaggacttaactaacccatacttcgcacacctacttggcaaagggcttgtgctcatcgatggcgacgaGTggaaacgccactacaaggtggtccacccagccttcgacatggacaagctcaagatgatgacggtgaccatatctgactgcactgggtcaatgatgtctgagtgggagtctgagttggggatgaaaggtggaagcgcggagattgaactgagtcagcggtttcaagagctcactgctgacgtgatctcgcgcacggcgtttgggagcagctatagtgaggggaagcaggtcttcctggcacaaaggaaactccagtttcttgccttctccatgtttctcaccatccaaatcccagggttccgctaccttccaactaaaaaaaacctaaagatatggtcactagacaagaaggtgaggagcatgctcacgaacatcatcaagattcggctcgctaacaaggacaccatgggatatgggaacgacttgcttggattgatgttggagacgtgcgcgccagagcatgacgaaagccagcagttgagcatggacgagatcattgccgagtgcaagaccttcttcttcggcgggcatgacactacctcgcacctactcacttggaccatgttcttgctgagcacacatccagagtggatgaggaagatcaggaaggaggtgacaactatgtgcggtgacgaagtgcccactggtgacatgctcaacaagatgaacttactcaacatgttccttctcgagactctaaggttgtacggccctgtctcactcatatcgaggaggactggcaccaatgccaaattcggtggcatcaaggtgcctgagggcaccatcctaaggatcccaatcgcaacaatccatcgtgacaaggaagtgtggggtgaggacgccgacgagttcaagccggcgaggttcgagaatggagtgtccaaggcagcgaagcaccccaacgcactactctccttctctaacgggccgaggtcatgcatcgggcagaatttcgccatgattgaggccaaagccgtcatcaccatgatcctgcagaggttctccttcacgttgtcccctaagtacgtccacacgccaattagtgtgatcacgctaaggcctaagtacggtcttttgccgaatggagtgtccaaagaagcgaagaaccctaatgcgttgctctccttctctagcgggccgaggtcgtgcatcgggcagaacttcgccatgttggaggcgaaggctgtcatcaccatgatcttgcaaaggttctcctttacactatcccccaagcgaagaaattcagaacttgttcgatctgctggccatgggtttcgagtggacggtggcgacggccgcggcggcggtggcgcgtcgtgggcgttcatcgcggtggtggtgaagctggtgtggtggccccgcgccatcactaggcggctgggggcgcagggcgtcgccgggccgggatacaggttcttctccggcaacctcagcgagatcaggcgtctccgcgccgagggcgccaaccttgtgctcgacgtctcctcccatgacttcgtccccatcgtgcagccacacatccgcacatggattcccctctacgggaagacgttcttgtattggttcgggacacggccaaacatatgcttggcggatatgaacatggtgaggcaggtgttgtcggaccgtacagggatgttccccaagtacatagataacatgcagttcgcacgcctgcttggtaaggggctcgtgctcaccgacgacgacgagtggaaacgccactacaaggtggttcacccagccttcgacatggacaagctcaagatgatgacggagaccatatccgactgcgcccgatcaatgatgtttgagtgggaatcggagttggggatgaagggcggaagcacggagattgaactgagccggtggtttgaggagctcactgttgatgtgatttcgcgtacggcatttgggagcatctacagggaggggaagcaggtcttcctagcacagaggaagctccaatttcttgccttctccgcgtttctcaccatccaaatcccagggttcagctacctcctgaccaaaaagaatatgaagacatggtcactagacaagaaggtgaggagcatgctcatgaacattatcaagagtcgactcactaacaaagaaaccatgggatatgggaatgacctgcttggattgatgttagaggcatgcgtgccagagcatggcgggagccagccacaactcagcatggacgatatcatcgctgagtgcaagaccttcttcttcgctgggcatgacaccacctcgcaattgctcacttggaccatgttcttgcttagcacacaccaacattggatggagaaactcagaaaggaggttaggatggtgtgcaatgacgaggtgcccaccggagacatgctcaacaagttgaaattggtcaacatgttccttctcgagaccctaaggttgtatggccctgtctcactcgtaacaaggagagatggtaccgacgtcaagcttggtagcatcaaggttcctaagggcaccatcctaacaatcccgatcgcaacaatccaccgtgacaaggaagtgtggggggaggacgccgatgagttcaagccagagaggttcgagaatggagtgttgaaggcagcgaagcaccccagcgcactactctccttctctatcgggctaaggtcgtgcatcgggcaaaactttgccatgatcgaggccaagaccatcatcgccatgatcctgcaaaggttctccttcacgttgtcccctaagtacgtccacacgccaatcagtgtgatcacgctaaggcctaagtatggtcttccaatgatccttaggagcctcaaggtaaagagagatagccgatcgaagcagaagcagagctacagtataggcgtacgtactccggcgactggttcaggtgatctcgcggcgtacgtctag
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| Protein seq | MGNFVWMVAAAAAAVASWAFIAVVVKLVWRPRAISRRLRAQAVGGPGYRFFSGNLGEIRRLRAEGAGVVLDVSSHDFVPIVQPHFRKWVSLYGKTFLFWFGAQPNICLADINIVRQVLSDRTGMYPKDLTNPYFAHLLGKGLVLIDGDEWKRHYKVVHPAFDMDKLKMMTVTISDCTGSMMSEWESELGMKGGSAEIELSQRFQELTADVISRTAFGSSYSEGKQVFLAQRKLQFLAFSMFLTIQIPGFRYLPTKKNLKIWSLDKKVRSMLTNIIKIRLANKDTMGYGNDLLGLMLETCAPEHDESQQLSMDEIIAECKTFFFGGHDTTSHLLTWTMFLLSTHPEWMRKIRKEVTTMCGDEVPTGDMLNKMNLLNMFLLETLRLYGPVSLISRRTGTNAKFGGIKVPEGTILRIPIATIHRDKEVWGEDADEFKPARFENGVSKAAKHPNALLSFSNGPRSCIGQNFAMIEAKAVITMILQRFSFTLSPKYVHTPISVITLRPKYGLLPNGVSKEAKNPNALLSFSSGPRSCIGQNFAMLEAKAVITMILQRFSFTLSPKRRNSELVRSAGHGFRVDGGDGRGGGGASWAFIAVVVKLVWWPRAITRRLGAQGVAGPGYRFFSGNLSEIRRLRAEGANLVLDVSSHDFVPIVQPHIRTWIPLYGKTFLYWFGTRPNICLADMNMVRQVLSDRTGMFPKYIDNMQFARLLGKGLVLTDDDEWKRHYKVVHPAFDMDKLKMMTETISDCARSMMFEWESELGMKGGSTEIELSRWFEELTVDVISRTAFGSIYREGKQVFLAQRKLQFLAFSAFLTIQIPGFSYLLTKKNMKTWSLDKKVRSMLMNIIKSRLTNKETMGYGNDLLGLMLEACVPEHGGSQPQLSMDDIIAECKTFFFAGHDTTSQLLTWTMFLLSTHQHWMEKLRKEVRMVCNDEVPTGDMLNKLKLVNMFLLETLRLYGPVSLVTRRDGTDVKLGSIKVPKGTILTIPIATIHRDKEVWGEDADEFKPERFENGVLKAAKHPSALLSFSIGLRSCIGQNFAMIEAKTIIAMILQRFSFTLSPKYVHTPISVITLRPKYGLPMILRSLKVKRDSRSKQKQSYSIGVRTPATGSGDLAAYV |
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| Function | Cytochrome P450 709B2 [UniProtKB/Swiss-Prot:F4IK45] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_07g0024580 | OsPr106_07g0024580.02 | Chr07 | 27384115 | 27392673 | + | NAM | ||
| CDS seq | atgggtaatctggggtggatggtggcggcggcggtggcggcggtggtggcgtcgtgggcgttcgacgcggtggtgaagctggtgtggaggccccgcgccatcaccaggcggctgcgggcgcagggcgtcggcgggccgggataccggttcttctccggcaacctcggcgagatcaagcggctccgcgacgagggcgccggcgtcgtgctcgacgtctcctcccatgacttcgtccccatcgtgcagccgcacttccgcaaatggatccccctctatgggaagacattcatgtattggttcggagcgcggcctaccatttgcttggcagacgtgagcatggtgaggcaggtgttatcggaccggacggggatgtaccctaagaacgtgtcaaacccatacttcgcacgactactcggcaaggggcttgtgctcaccgacggcgatgagtggaagcgccaccgcaaagtagtccacccggcatttaacatggacaagctcaagatgatgactgtgactatgtccgattgtgcccaatctatgatttccgagtgggaatccgagttggggacaaagggcgatatagtggagatcgagctgagccgacgattcgaggagcttactgctgatgtgatctcgcacacagcattcgggagcagctataaggaggggaagcaagtgttcttggcacaaagagagcttcaatttcttgccttctccaccttccttagcatccaaatcccggggtccagctacctcccgaccaagaagaacctaaagacatggtcagtggacaagaaggtgagaagcatgctcacggacatcatcaagagccggctcaacaacaaagatgtcgcaggatacgggaacgacctgctcggattaatgctggaggcatgcgcaccggagcacggggagagccagccacaacttagtatggacgagatcatcgccgagtgcaagacattcttctttgcaggacacgacaccacctcacaccttctcacatggaccatgttcctattgagcacacatccagagtggcaggagaagctcagggaggaggtggcaatggagtgtgacggcaaggtgcccaccggtgacatgctcaacaagctgaagctagtcaacatgttcctcctcgagaccctgaggttgtatggccctgttgcattcatacagaggagggtcaacgccgagctagaactcggcggcatcacggtccctgagggcactgtcctatcgattccgattgcaacaatccaccgcgataaggaggtgtggggcgaggacgccgacatattcaagccggagaggttcgagaatggggtgtcaaaggcgggaaaatatcccaacgcgttgctctccttctccagtgggccgagggcatgcattgggcagaacttcgccatgatcgaggccaaggccgtaattgcaatgatcctacagaggttctcctttactctatcacccaagtacgtccacgcgccaaccgacgtgatcacgcttcggccaaagtatgggctgcctatgatcctcaagagtctcaagggcgtgcgcggccccgggtacaggctgctcgtcgggagcctcggcgacatcaacaagctccgcgcggacgccgccggcgccggcggcgccgcggcgctcgacgtcgcctcccacgacttcatccccttcgtccagcctcagttccgccaatggatccctctctacgggcgagtgttcttgtactggtttggatggacgccggacatgtgcgtggccgacgtcgaggtggcgaagcaggtgctctcggacaggacagggctgttccccaagaacgtgacgacaccgatgctgctcaagctgttcggcagggggctcgtcctggccaacggcgacgagtggcagcgacacaagaaggtcgtccaCcccgccttcaacacggacaagctcaagATgatgacggcgacaatggccggcgtcgcacggtcgatggtgtcgaggtgggaggagaaggtggcgagccatggcgggaaggtggtgatcgagctgagcagccagttcgaggagctgactgcggacgtgatctctcacacggcgttcgggagcagctacgcggaggggaagcaggTtttcatggcgatcaaggagctccagttcatcgccttctcaagccttctcagcgtccaaatcccaggctccaggtattttccaaccaagaagaatctgaaagtatggaggctggacaggaaggtgaggagtacgctgatgcagatcatcagcaacagactcgccgccgccgcgaaggagaaggccggcggcggtggcggtggctacggcgaggacctgctcgggctgatgctggaggccagcgcgccaccggagctgggcacgaagcgtcgtcagccgccggtgctgagcatggacgagatcatcgacgagtgcaagaccttcttctttgccgggcaggagaccacctcgcacctcctctcctggaccatgtttcttctcagcacgcacccggactggcaggacaagctccgggaagaagccctaaatcagttcttgctggagacgctgcggctgtacagCccggtgccggcgatccggaggcggacggcggcggcggtggagatgggcggcgtgacggtgccgggaggcacgatgctgacgttcccgatcgcgacgatgcaccgcgacgaggaggtgtggggcgccgacgccggggtgttcgacccgatgaggttcgacggcggcggcggcgccatggccaagctgctgtccttctccacggggccgagggcgtgcgtcgggcagagcttcgccatggtcgaggcgaaggccgtcgtcgccgcgatactccggcggttcaggctggagctctcgccggagtacgtccacgcgcccaccgacatcgttcacttttggtaa
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| Protein seq | MGNLGWMVAAAVAAVVASWAFDAVVKLVWRPRAITRRLRAQGVGGPGYRFFSGNLGEIKRLRDEGAGVVLDVSSHDFVPIVQPHFRKWIPLYGKTFMYWFGARPTICLADVSMVRQVLSDRTGMYPKNVSNPYFARLLGKGLVLTDGDEWKRHRKVVHPAFNMDKLKMMTVTMSDCAQSMISEWESELGTKGDIVEIELSRRFEELTADVISHTAFGSSYKEGKQVFLAQRELQFLAFSTFLSIQIPGSSYLPTKKNLKTWSVDKKVRSMLTDIIKSRLNNKDVAGYGNDLLGLMLEACAPEHGESQPQLSMDEIIAECKTFFFAGHDTTSHLLTWTMFLLSTHPEWQEKLREEVAMECDGKVPTGDMLNKLKLVNMFLLETLRLYGPVAFIQRRVNAELELGGITVPEGTVLSIPIATIHRDKEVWGEDADIFKPERFENGVSKAGKYPNALLSFSSGPRACIGQNFAMIEAKAVIAMILQRFSFTLSPKYVHAPTDVITLRPKYGLPMILKSLKGVRGPGYRLLVGSLGDINKLRADAAGAGGAAALDVASHDFIPFVQPQFRQWIPLYGRVFLYWFGWTPDMCVADVEVAKQVLSDRTGLFPKNVTTPMLLKLFGRGLVLANGDEWQRHKKVVHPAFNTDKLKMMTATMAGVARSMVSRWEEKVASHGGKVVIELSSQFEELTADVISHTAFGSSYAEGKQVFMAIKELQFIAFSSLLSVQIPGSRYFPTKKNLKVWRLDRKVRSTLMQIISNRLAAAAKEKAGGGGGGYGEDLLGLMLEASAPPELGTKRRQPPVLSMDEIIDECKTFFFAGQETTSHLLSWTMFLLSTHPDWQDKLREEALNQFLLETLRLYSPVPAIRRRTAAAVEMGGVTVPGGTMLTFPIATMHRDEEVWGADAGVFDPMRFDGGGGAMAKLLSFSTGPRACVGQSFAMVEAKAVVAAILRRFRLELSPEYVHAPTDIVHFW
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_07g0024580 | OsPr106_07g0024580.01 | Chr07 | 27368742 | 27384287 | + | NAM | ||
| CDS seq | atgggtaatttcgtgtggatggtggcggcggcggcggcggcggtggcgtcgtgggcgttcatcgcggtggtggtgaagctggtgtggaggccccgcgccatcagcaggcggctgcgggcgcaggccgtcggcgggccgggatacaggttcttctccggcaacctcggcgagatcaggcgtctccgcgccgagggcgccggcgtcgtgctcgacgtctcctcccatgacttcgtccccatcgtgcagccgcacttccgcaaatgggtttccctctacgggaagacgttcttgttctggttcggggcacaaccgaacatatgcttggcggatataaacattgtgaggcaggtgttgtcggaccgtacggggatgtaccctaaggacttaactaacccatacttcgcacacctacttggcaaagggcttgtgctcatcgatggcgacgaGTggaaacgccactacaaggtggtccacccagccttcgacatggacaagctcaagatgatgacggtgaccatatctgactgcactgggtcaatgatgtctgagtgggagtctgagttggggatgaaaggtggaagcgcggagattgaactgagtcagcggtttcaagagctcactgctgacgtgatctcgcgcacggcgtttgggagcagctatagtgaggggaagcaggtcttcctggcacaaaggaaactccagtttcttgccttctccatgtttctcaccatccaaatcccagggttccgctaccttccaactaaaaaaaacctaaagatatggtcactagacaagaaggtgaggagcatgctcacgaacatcatcaagattcggctcgctaacaaggacaccatgggatatgggaacgacttgcttggattgatgttggagacgtgcgcgccagagcatgacgaaagccagcagttgagcatggacgagatcattgccgagtgcaagaccttcttcttcggcgggcatgacactacctcgcacctactcacttggaccatgttcttgctgagcacacatccagagtggatgaggaagatcaggaaggaggtgacaactatgtgcggtgacgaagtgcccactggtgacatgctcaacaagatgaacttactcaacatgttccttctcgagactctaaggttgtacggccctgtctcactcatatcgaggaggactggcaccaatgccaaattcggtggcatcaaggtgcctgagggcaccatcctaaggatcccaatcgcaacaatccatcgtgacaaggaagtgtggggtgaggacgccgacgagttcaagccggcgaggttcgagaatggagtgtccaaggcagcgaagcaccccaacgcactactctccttctctaacgggccgaggtcatgcatcgggcagaatttcgccatgattgaggccaaagccgtcatcaccatgatcctgcagaggttctccttcacgttgtcccctaagtacgtccacacgccaattagtgtgatcacgctaaggcctaagtacggtcttttgccgaatggagtgtccaaagaagcgaagaaccctaatgcgttgctctccttctctagcgggccgaggtcgtgcatcgggcagaacttcgccatgttggaggcgaaggctgtcatcaccatgatcttgcaaaggttctcctttacactatcccccaagcgaagaaattcagaacttgttcgatctgctggccatgggtttcgagtggacggtggcgacggccgcggcggcggtggcgcgtcgtgggcgttcatcgcggtggtggtgaagctggtgtggtggccccgcgccatcactaggcggctgggggcgcagggcgtcgccgggccgggatacaggttcttctccggcaacctcagcgagatcaggcgtctccgcgccgagggcgccaaccttgtgctcgacgtctcctcccatgacttcgtccccatcgtgcagccacacatccgcacatggattcccctctacgggaagacgttcttgtattggttcgggacacggccaaacatatgcttggcggatatgaacatggtgaggcaggtgttgtcggaccgtacagggatgttccccaagtacatagataacatgcagttcgcacgcctgcttggtaaggggctcgtgctcaccgacgacgacgagtggaaacgccactacaaggtggttcacccagccttcgacatggacaagctcaagatgatgacggagaccatatccgactgcgcccgatcaatgatgtttgagtgggaatcggagttggggatgaagggcggaagcacggagattgaactgagccggtggtttgaggagctcactgttgatgtgatttcgcgtacggcatttgggagcatctacagggaggggaagcaggtcttcctagcacagaggaagctccaatttcttgccttctccgcgtttctcaccatccaaatcccagggttcagctacctcctgaccaaaaagaatatgaagacatggtcactagacaagaaggtgaggagcatgctcatgaacattatcaagagtcgactcactaacaaagaaaccatgggatatgggaatgacctgcttggattgatgttagaggcatgcgtgccagagcatggcgggagccagccacaactcagcatggacgatatcatcgctgagtgcaagaccttcttcttcgctgggcatgacaccacctcgcaattgctcacttggaccatgttcttgcttagcacacaccaacattggatggagaaactcagaaaggaggttaggatggtgtgcaatgacgaggtgcccaccggagacatgctcaacaagttgaaattggtcaacatgttccttctcgagaccctaaggttgtatggccctgtctcactcgtaacaaggagagatggtaccgacgtcaagcttggtagcatcaaggttcctaagggcaccatcctaacaatcccgatcgcaacaatccaccgtgacaaggaagtgtggggggaggacgccgatgagttcaagccagagaggttcgagaatggagtgttgaaggcagcgaagcaccccagcgcactactctccttctctatcgggctaaggtcgtgcatcgggcaaaactttgccatgatcgaggccaagaccatcatcgccatgatcctgcaaaggttctccttcacgttgtcccctaagtacgtccacacgccaatcagtgtgatcacgctaaggcctaagtatggtcttccaatgatccttaggagcctcaaggtaaagagagatagccgatcgaagcagaagcagagctacagtataggcgtacgtactccggcgactggttcaggtgatctcgcggcgtacgtctag
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| Protein seq | MGNFVWMVAAAAAAVASWAFIAVVVKLVWRPRAISRRLRAQAVGGPGYRFFSGNLGEIRRLRAEGAGVVLDVSSHDFVPIVQPHFRKWVSLYGKTFLFWFGAQPNICLADINIVRQVLSDRTGMYPKDLTNPYFAHLLGKGLVLIDGDEWKRHYKVVHPAFDMDKLKMMTVTISDCTGSMMSEWESELGMKGGSAEIELSQRFQELTADVISRTAFGSSYSEGKQVFLAQRKLQFLAFSMFLTIQIPGFRYLPTKKNLKIWSLDKKVRSMLTNIIKIRLANKDTMGYGNDLLGLMLETCAPEHDESQQLSMDEIIAECKTFFFGGHDTTSHLLTWTMFLLSTHPEWMRKIRKEVTTMCGDEVPTGDMLNKMNLLNMFLLETLRLYGPVSLISRRTGTNAKFGGIKVPEGTILRIPIATIHRDKEVWGEDADEFKPARFENGVSKAAKHPNALLSFSNGPRSCIGQNFAMIEAKAVITMILQRFSFTLSPKYVHTPISVITLRPKYGLLPNGVSKEAKNPNALLSFSSGPRSCIGQNFAMLEAKAVITMILQRFSFTLSPKRRNSELVRSAGHGFRVDGGDGRGGGGASWAFIAVVVKLVWWPRAITRRLGAQGVAGPGYRFFSGNLSEIRRLRAEGANLVLDVSSHDFVPIVQPHIRTWIPLYGKTFLYWFGTRPNICLADMNMVRQVLSDRTGMFPKYIDNMQFARLLGKGLVLTDDDEWKRHYKVVHPAFDMDKLKMMTETISDCARSMMFEWESELGMKGGSTEIELSRWFEELTVDVISRTAFGSIYREGKQVFLAQRKLQFLAFSAFLTIQIPGFSYLLTKKNMKTWSLDKKVRSMLMNIIKSRLTNKETMGYGNDLLGLMLEACVPEHGGSQPQLSMDDIIAECKTFFFAGHDTTSQLLTWTMFLLSTHQHWMEKLRKEVRMVCNDEVPTGDMLNKLKLVNMFLLETLRLYGPVSLVTRRDGTDVKLGSIKVPKGTILTIPIATIHRDKEVWGEDADEFKPERFENGVLKAAKHPSALLSFSIGLRSCIGQNFAMIEAKTIIAMILQRFSFTLSPKYVHTPISVITLRPKYGLPMILRSLKVKRDSRSKQKQSYSIGVRTPATGSGDLAAYV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsPr106_07g0024580 | OsPr106_07g0024580.03 | Chr07 | 27389990 | 27392576 | + | IsoSeq | ||
| CDS seq | gaacagcagcatcgatctatctcacactcgccccgcgtgcgcgcaaatgggttacggatgggcgctcgccgccgtgctggcgacgtggtgcctgctcgacgcgctgtcgcgcctcgtgtggcggccgcgcgccgtggccgcggcgctgcggcggcagggcgtgcgcggccccgggtacaggctgctcgtcgggagcctcggcgacatcaacaagctccgcgcggacgccgccggcgccggcggcgccgcggcgctcgacgtcgcctcccacgacttcatccccttcgtccagcctcagttccgccaatggatccctctctacgggcgagtgttcttgtactggtttggatggacgccggacatgtgcgtggccgacgtcgaggtggcgaagcaggtgctctcggacaggacagggctgttccccaagaacgtgacgacaccgatgctgctcaagctgttcggcagggggctcgtcctggccaacggcgacgagtggcagcgacacaagaaggtcgtccaCcccgccttcaacacggacaagctcaagATgatgacggcgacaatggccggcgtcgcacggtcgatggtgtcgaggtgggaggagaaggtggcgagccatggcgggaaggtggtgatcgagctgagcagccagttcgaggagctgactgcggacgtgatctctcacacggcgttcgggagcagctacgcggaggggaagcaggTtttcatggcgatcaaggagctccagttcatcgccttctcaagccttctcagcgtccaaatcccaggctccaggtattttccaaccaagaagaatctgaaagtatggaggctggacaggaaggtgaggagtacgctgatgcagatcatcagcaacagactcgccgccgccgcgaaggagaaggccggcggcggtggcggtggctacggcgaggacctgctcgggctgatgctggaggccagcgcgccaccggagctgggcacgaagcgtcgtcagccgccggtgctgagcatggacgagatcatcgacgagtgcaagaccttcttctttgccgggcaggagaccacctcgcacctcctctcctggaccatgtttcttctcagcacgcacccggactggcaggacaagctccgggaagaagccgtgagagagtgcgccggcgccggcgccggggacgacgacgaccagctccccacctacgacatgctcggcaagctgaagctgctaaatcagttcttgctggagacgctgcggctgtacagCccggtgccggcgatccggaggcggacggcggcggcggtggagatgggcggcgtgacggtgccgggaggcacgatgctgacgttcccgatcgcgacgatgcaccgcgacgaggaggtgtggggcgccgacgccggggtgttcgacccgatgaggttcgacggcggcggcggcgccatggccaagctgctgtccttctccacggggccgagggcgtgcgtcgggcagagcttcgccatggtcgaggcgaaggccgtcgtcgccgcgatactccggcggttcaggctggagctctcgccggagtacgtccacgcgcccaccgacgtcatcacgctccgccccaagcacggCctccccatggtcgtcacacgcgtccacgcgtgacgtggatacaagcgattcgtcacccctcgggaggacgttatttgcatgtccatgtaaatagt
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| Protein seq | EQQHRSISHSPRVRANGLRMGARRRAGDVVPARRAVAPRVAAARRGRGAAAAGRARPRVQAARREPRRHQQAPRGRRRRRRRRGARRRLPRLHPLRPASVPPMDPSLRASVLVLVWMDAGHVRGRRRGGEAGALGQDRAVPQERDDTDAAQAVRQGARPGQRRRVAATQEGRPPRLQHGQAQDDDGDNGRRRTVDGVEVGGEGGEPWREGGDRAEQPVRGADCGRDLSHGVREQLRGGEAGFHGDQGAPVHRLLKPSQRPNPRLQVFSNQEESESMEAGQEGEEYADADHQQQTRRRREGEGRRRWRWLRRGPARADAGGQRATGAGHEASSAAGAEHGRDHRRVQDLLLCRAGDHLAPPLLDHVSSQHAPGLAGQAPGRSRERVRRRRRRGRRRPAPHLRHARQAEAAKSVLAGDAAAVQPGAGDPEADGGGGGDGRRDGAGRHDADVPDRDDAPRRGGVGRRRRGVRPDEVRRRRRRHGQAAVLLHGAEGVRRAELRHGRGEGRRRRDTPAVQAGALAGVRPRAHRRHHAPPQARPPHGRHTRPRVTWIQAIRHPSGGRYLHVHVNS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr07 | 27391362 | 27392023 | + | OsPr106_07g0024580.03 | OsPr106_07g0024580.03,OsPr106_07g0024580.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.806940 | 10.738488 | 12.961476 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0419000 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g44110 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0419100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0012020 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0011830 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0011900 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0011750 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0019000 | RBH | 0.000000 | 0.000000 | 5.551703 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0433000 | RBH | 63.9028055 | 47.0452215 | 96.268711 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0012180 | RBH | 0.0 | 0.0 | 0.373623 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0444600 | RBH | 20.8971815 | 9.7736715 | 10.0450955 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0011730 | RBH | 0.082626 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0024500 | RBH | 0.210472 | 11.452056 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0011650 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0024600 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0011840 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G024320 | SBH | 0.229475 | 0.549071 | 1.238085 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0011600 | RBH | 0.0 | 0.0 | 0.210024 |
