Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_07g0024360 | OGI:07038620 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr07:27387118-27405691 | ||||||||
| Gene Symbol | CYP709C9, OsCYP709C9, CYP709C5, OsCYP709C5 | ||||||||||
| DNA seq | atgggtaatttcgtgtggatggtggcggcggcggcggcggcggtggcgtcgtgggcgttcatcgcggtggtggtgaagctggtgtggaggccccgcgccatcagcaggcggctgcgggcgcagggcgtcggcgggccgggatacaggttcttctccggcaacctcggcgagatcaggcgtctccgcgccgagggcgccggcgtcgtgctcgacgtctcctcccatgacttcgtccccatcgtgcagccgcacttccgcaaatgggtttccctctacggtatgccatgttttctgaggtttagtttttcgatattttaaaatgccatgagtaccaattattttaatttgttagcttttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatttgtgtgcttattatgtgttgtagggaagacgttcttgttctggttcagggcacaaccgaacatatgcttggcggatataaacattgtgaggcaggtgttgtcggaccgtacggggatgtaccctaaggacttaactaacccatacttcgcacacctacttggcaaagggcttgtgctcatcgatggcgacgagtggaaacgccactacaaggtggtccacccagccttcgacatggacaagctcaagatgatgacggtgaccatatctgactgcaccgggtcaatgatgtctgagtgggagtctgagttggggatgaaaggtggaagcgtggagattgaactgagtcagcggtttcaagagctcactgctgacgtgatctcgcgcacggcgtttgggagcagctatagtgaggggaagcaggtcttcctggcacaaaggaaactccagtttcttgccttctccatgtttctcaccatccaaatcccagggttccgctaccttccaactaaaaaaaacctaaagatatggtcactagacaagaaggtgaggagcatgctcacgaacatcatcaagattcggctcgctaacaaggacaccatgggatatgggaacgacttgcttggattgatgttggagacgtgcgcgccagagcatgacgaaagccagcagttgagcatggacgagatcattgccgagtgcaagaccttcttcttcggcgggcatgacactacctcgcacctgctcacttggaccatgttcttgctgagcacacatccggagtggatgaggaagatcaggaaggaggtgacaactatgtgcggtgacgaagtgcccactggtgacatgctcaacaagatgaacttactcaacatgttccttctcgagactctaaggttgtacggccctgtctcactcatatcgaggaggactggcaccaatgccaaattcggtggcatcaaggtgcctgagggcaccatcctaaggatcccaatcgcaacaatccatcgtgacaaggaagtgtggggtgaggacgccgatgagttcaagccggcgaggttcgagaatggagtgtccaaggcagcgaagcaccccaacgcactactctccttctctaacgggccgaggtcatgcatcgggcagaatttcgccatgattgaggccaaagccgtcatcaccatgatcctgcagaggttctccttcacgttgtcccctaagtacgtccacacgccaattagtgtgatcacgctaaggcctaagtacggtcttccaatgatccttaggagcctcaaggtaaaaagagatctgtaagatccaaggaatgttttacttacactgcttttttagcaccgctttgttgtacacgagttgtcttgttcacaagtatttgcttcctaataatgttatcgtgtaatgtattgatatatatatttcagttatacaaaattgggatgtaaatttctctagtttgcttgttgattggatataagaagtttctctatttctagcatatcaaccaattagtctcttcagtcgagcaatatgatactttgtgagtccaatcaggccaaatggttgtcgacaatgtcatttacttgtcaatcaagacggaaaatagaatatacatgtagaaaaaaggagcaagtcttgaaagaaatgtaaaaattaaccacctaaaaaatcaatatattattaactaaagagcaactccctcccgtttgtgtatactataagtcgatttgacttttcctctagtcaaactttttttaggtttagctaagtttatagcatagtttaacgatatctacaacatcaaattagtttcgttaaatatattattgtgtcgacggagtagatcacgactacggtatttgcagagtatggggatcgttggtgccagggtatacacgagattgagttaaaagagacggaaacaatgatttttatataggtttgggccccttatctctaaggtaatagccctagtcctattggccgaagccggtgttgctcttatttatcagaatcacacaagcacaatatttgggataaccaatctagtcgtcaacgacttggcggtatggaacaccacatgtagtcaatgacgaggtagtcttcctcctcgaatacgaacacggcgagatcagagatagcgctaaatatctcttgttggactctgaggcactagattgggtctgtctaggtttatctccaacgtcgatgtttggtggcatctattagtgtctattctgactgagcgtgtctattctagctaggcttatcttagtcccccctagggagtcttgtatttatacctatagatgtcccattatctaagtagaaataggaagaccaatatggatatgatccgactagtcattgtagtttccatgtagagctctgcttctccttccttatccggaataccttccatatatgatgcatgattttgtataaaacttagtatatggtaggcttcgccgagctcaacccaaaactattgggtatgccttgtacataacactgacacattgaatatattttgataatatgtttgttttgtgttgaaaatatagttatattttcagaaacttgatcaaacttaaaaaagttttactaaaaaaaatcaaagtgatttataatataaaatggagggagtagaagattattcactttcttgatacatatgacgccatcgacttttaaacatcgttccacaattcatctcattaaaaaattaacctttagttataaaataggtcgcaacaaaataaataataattttgtaattttgtaaataacacgaatggtactattcaaatatgtagctcttatctaaaatcaggtgttcctctagttgaccgggaaagtcacatgcagaagacaattaaggccaggttacaatgagacgaagggaaacaatgtttaaataatactccctccatctacttttgatagtcatatttcatcttgacacacagatcaaggataagtaattctacttatcatttaaacatgctactagttattcctcgtaaacaagcgattcattaatatttacatttctcgatgcccaggtagccaatcttgtgtgtgagaatagagagtcacgcattaaatccaagaaagtcattaagaggatagattgttggattgaaatatgcctatcaaaaataaatttttcagatttagaaatatgactatcaaaaatagatggagggagtaaatagaaaagtttataaggttcacctactaggagagaaagggggacactgtttcaatagaagagtttataagatccagctactaggagagaaagggagactatttaaataaaaagtttataaggtccagctactaggagagaaagggagacaatgttttttttttaaagaaatgtttaatatgttactcattaaatagctcaaagaaacaaatacttcatatgctctgtttgtataaccggtgacttcagtgttgacttgcaactcgcaacagccacatctcaaaagaggtagggcttatttggtttagtgccctattaaaataataatagtgttaaaatcttgataagttttaacgcgttataaagaaaaggtgtgtttggattgatgttatttagaagtcaaattttgtatagtagtgaaggaagtttaataactatgccaaattaaacatttttattaccaacttattggattcaaaccaaactatctcatttactattcaaactatcaaaatatattttggtagacatgttttagcatcaatccgaaatgacctggtgtaccttttttagcgattggctcaacacggtcgtttgacagtgggcttaaaggaggcccaatacatgcgggagtcagcgaaagagcaccagaagaagcccatgccatcccattcggatcggcagatcctctcaaaaacggcccagtcgagccattcgtacaagccgccggcggcgagatttgttttacaacaattactacctaagccccgaaaagtaatttatggaataagtacgacatatttacaaacaaaaaataatttgtaaataaaacttctatatacgtgttcttagcgatctaagaggctaaaaaataaacttcgataaaaaaccacaaaatctgctctaaatttaaggttgaaaattcaaattttggcagataagcataagcataagtgaaaagatgaggcctccatctttgtgtccagataagcataaacataaacgaaaagatgaggcctccatctttgtgtcctccaaacgcgtacacttcagataaaaaagaaagttgttcagtctcaaatattagtttggcgctacacaagtttctattttccgtgaatttaccgctagcacacgctacctatatattctcctgagttttcacttggtcattaattcgtgttttgaggtcttttgccgaatggagtgtccaaagaagcgaagaaccctaatgcgttgctctccttctctagcgggccgaggtcgtgcatcgggcagaacttcgccatgttggaggc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| CDS seq | atgggtaatttcgtgtggatggtggcggcggcggcggcggcggtggcgtcgtgggcgttcatcgcggtggtggtgaagctggtgtggaggccccgcgccatcagcaggcggctgcgggcgcagggcgtcggcgggccgggatacaggttcttctccggcaacctcggcgagatcaggcgtctccgcgccgagggcgccggcgtcgtgctcgacgtctcctcccatgacttcgtccccatcgtgcagccgcacttccgcaaatgggtttccctctacgggaagacgttcttgttctggttcagggcacaaccgaacatatgcttggcggatataaacattgtgaggcaggtgttgtcggaccgtacggggatgtaccctaaggacttaactaacccatacttcgcacacctacttggcaaagggcttgtgctcatcgatggcgacgagtggaaacgccactacaaggtggtccacccagccttcgacatggacaagctcaagatgatgacggtgaccatatctgactgcaccgggtcaatgatgtctgagtgggagtctgagttggggatgaaaggtggaagcgtggagattgaactgagtcagcggtttcaagagctcactgctgacgtgatctcgcgcacggcgtttgggagcagctatagtgaggggaagcaggtcttcctggcacaaaggaaactccagtttcttgccttctccatgtttctcaccatccaaatcccagggttccgctaccttccaactaaaaaaaacctaaagatatggtcactagacaagaaggtgaggagcatgctcacgaacatcatcaagattcggctcgctaacaaggacaccatgggatatgggaacgacttgcttggattgatgttggagacgtgcgcgccagagcatgacgaaagccagcagttgagcatggacgagatcattgccgagtgcaagaccttcttcttcggcgggcatgacactacctcgcacctgctcacttggaccatgttcttgctgagcacacatccggagtggatgaggaagatcaggaaggaggtgacaactatgtgcggtgacgaagtgcccactggtgacatgctcaacaagatgaacttactcaacatgttccttctcgagactctaaggttgtacggccctgtctcactcatatcgaggaggactggcaccaatgccaaattcggtggcatcaaggtgcctgagggcaccatcctaaggatcccaatcgcaacaatccatcgtgacaaggaagtgtggggtgaggacgccgatgagttcaagccggcgaggttcgagaatggagtgtccaaggcagcgaagcaccccaacgcactactctccttctctaacgggccgaggtcatgcatcgggcagaatttcgccatgattgaggccaaagccgtcatcaccatgatcctgcagaggttctccttcacgttgtcccctaagtacgtccacacgccaattagtgtgatcacgctaaggcctaagtacggtcttttgccgaatggagtgtccaaagaagcgaagaaccctaatgcgttgctctccttctctagcgggccgaggtcgtgcatcgggcagaacttcgccatgttggaggcgaaggctgtcatcaccatgatcttgcaaaggttctcctttacactatcccccaacaagacagcaaccagctgtaccaagcaagcagaacatgaacggttgattgattcaggcgaagaaattcagaacttgttcgatctgctggccatgggtttcgagtggacggtggcgacggccgcggcggcggtggcggcgtcgtgggcgttcatcgcggtggtggtgaagctggtgtggtggccccgcgccatcaccaggcggctgggggcgcagggcgtcgccgggccgggatacaggttcttctccggcaacctcagcgagatcaggcgtctccgcgccgagggcgccaaccttgtgctcgacgtctcctcccatgacttcgtccccatcgtgcagccacacatccgcaaatggattcccctctacgggaagacgttcttgtattggttcgggacacggccaaacatatgcttggcggatatgaacatggtgaggcaggtgttgtcggaccgtacagggatgttccccaagtacatagataatatgcagttcgcacgcctgcttggtaaggggctcgtgctcaccgacgacgacgagtggaaacgccactacaaggtggttcacccagccttcgacatggacaaactcaagatgatgacggagaccatatccgactgcgcccgatcaatgatgtttgagtgggaatcggagttggggatgaagggcggaagcacggagattgaactgagccggtggtttgaggagctcactgctgatgtgatttcgcgtacggcatttgggagcagctacagggaggggaagcaggtcttcctagcacagaggaagctccaatttcttgccttctccgcgtttctcaccatccaaatcccagggttcagctacctcctgaccaaaaagaatctgaagacatggtcactagacaagaaggtgaggagcatgctcatgaacattatcaagagtcgactcactaacaaagaaaccatgggatatgggaatgacctgcttggattgatgttagaggcatgcgtgccagagcatggcgggagccagccacaactcagcatggacgatatcatcgctgagtgcaagaccttcttcttcgctgggcatgacaccacctcgcaattgctcacttggaccatgttcttgcttagcacacaccaacattggatggagaaactcagaaaggaggttaggatggtgtgcaatgacgaggtgcccaccggagacatgctcaacaagttgaaattggtcaacatgttccttctcgagaccctaaggttgtatggccctgtctcactcataacgaggagagctggtaccgacgtcaagcttggtagcatcaaggttcctaaaggcaccatcctaacgatcccgatcgcaacaatccaccgtgacaaggaagtgtggggggaggacgccgatgagttcaagccagagaggttcgagaatggagtgttaaaggcagcgaagcaccccagcgcactactctccttctctatcgggctaaggtcgtgcatcgggcaaaactttgccatgattgaggccaagaccatcatcgccatgatcctgcaaaggttctccttcacgttgtcccctaagtacgtccacacgccaatcagtgtgatcacgctaaggcctaagtatggtcttccaatgatccttaggagcctcaaggtctcaccaaccagccgatcgaagcagaagcagagctacagtataggcgtacgtactccggcgactggttcaggtgatctcgcggcgtacgtctag
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| Protein seq | MGNFVWMVAAAAAAVASWAFIAVVVKLVWRPRAISRRLRAQGVGGPGYRFFSGNLGEIRRLRAEGAGVVLDVSSHDFVPIVQPHFRKWVSLYGKTFLFWFRAQPNICLADINIVRQVLSDRTGMYPKDLTNPYFAHLLGKGLVLIDGDEWKRHYKVVHPAFDMDKLKMMTVTISDCTGSMMSEWESELGMKGGSVEIELSQRFQELTADVISRTAFGSSYSEGKQVFLAQRKLQFLAFSMFLTIQIPGFRYLPTKKNLKIWSLDKKVRSMLTNIIKIRLANKDTMGYGNDLLGLMLETCAPEHDESQQLSMDEIIAECKTFFFGGHDTTSHLLTWTMFLLSTHPEWMRKIRKEVTTMCGDEVPTGDMLNKMNLLNMFLLETLRLYGPVSLISRRTGTNAKFGGIKVPEGTILRIPIATIHRDKEVWGEDADEFKPARFENGVSKAAKHPNALLSFSNGPRSCIGQNFAMIEAKAVITMILQRFSFTLSPKYVHTPISVITLRPKYGLLPNGVSKEAKNPNALLSFSSGPRSCIGQNFAMLEAKAVITMILQRFSFTLSPNKTATSCTKQAEHERLIDSGEEIQNLFDLLAMGFEWTVATAAAAVAASWAFIAVVVKLVWWPRAITRRLGAQGVAGPGYRFFSGNLSEIRRLRAEGANLVLDVSSHDFVPIVQPHIRKWIPLYGKTFLYWFGTRPNICLADMNMVRQVLSDRTGMFPKYIDNMQFARLLGKGLVLTDDDEWKRHYKVVHPAFDMDKLKMMTETISDCARSMMFEWESELGMKGGSTEIELSRWFEELTADVISRTAFGSSYREGKQVFLAQRKLQFLAFSAFLTIQIPGFSYLLTKKNLKTWSLDKKVRSMLMNIIKSRLTNKETMGYGNDLLGLMLEACVPEHGGSQPQLSMDDIIAECKTFFFAGHDTTSQLLTWTMFLLSTHQHWMEKLRKEVRMVCNDEVPTGDMLNKLKLVNMFLLETLRLYGPVSLITRRAGTDVKLGSIKVPKGTILTIPIATIHRDKEVWGEDADEFKPERFENGVLKAAKHPSALLSFSIGLRSCIGQNFAMIEAKTIIAMILQRFSFTLSPKYVHTPISVITLRPKYGLPMILRSLKVSPTSRSKQKQSYSIGVRTPATGSGDLAAYV |
||||||||||
| Function | Cytochrome P450 709B2 [UniProtKB/Swiss-Prot:F4IK45] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_07g0024360 | OsLima_07g0024360.01 | Chr07 | 27387118 | 27403061 | + | NAM | ||
| CDS seq | atgggtaatttcgtgtggatggtggcggcggcggcggcggcggtggcgtcgtgggcgttcatcgcggtggtggtgaagctggtgtggaggccccgcgccatcagcaggcggctgcgggcgcagggcgtcggcgggccgggatacaggttcttctccggcaacctcggcgagatcaggcgtctccgcgccgagggcgccggcgtcgtgctcgacgtctcctcccatgacttcgtccccatcgtgcagccgcacttccgcaaatgggtttccctctacgggaagacgttcttgttctggttcagggcacaaccgaacatatgcttggcggatataaacattgtgaggcaggtgttgtcggaccgtacggggatgtaccctaaggacttaactaacccatacttcgcacacctacttggcaaagggcttgtgctcatcgatggcgacgagtggaaacgccactacaaggtggtccacccagccttcgacatggacaagctcaagatgatgacggtgaccatatctgactgcaccgggtcaatgatgtctgagtgggagtctgagttggggatgaaaggtggaagcgtggagattgaactgagtcagcggtttcaagagctcactgctgacgtgatctcgcgcacggcgtttgggagcagctatagtgaggggaagcaggtcttcctggcacaaaggaaactccagtttcttgccttctccatgtttctcaccatccaaatcccagggttccgctaccttccaactaaaaaaaacctaaagatatggtcactagacaagaaggtgaggagcatgctcacgaacatcatcaagattcggctcgctaacaaggacaccatgggatatgggaacgacttgcttggattgatgttggagacgtgcgcgccagagcatgacgaaagccagcagttgagcatggacgagatcattgccgagtgcaagaccttcttcttcggcgggcatgacactacctcgcacctgctcacttggaccatgttcttgctgagcacacatccggagtggatgaggaagatcaggaaggaggtgacaactatgtgcggtgacgaagtgcccactggtgacatgctcaacaagatgaacttactcaacatgttccttctcgagactctaaggttgtacggccctgtctcactcatatcgaggaggactggcaccaatgccaaattcggtggcatcaaggtgcctgagggcaccatcctaaggatcccaatcgcaacaatccatcgtgacaaggaagtgtggggtgaggacgccgatgagttcaagccggcgaggttcgagaatggagtgtccaaggcagcgaagcaccccaacgcactactctccttctctaacgggccgaggtcatgcatcgggcagaatttcgccatgattgaggccaaagccgtcatcaccatgatcctgcagaggttctccttcacgttgtcccctaagtacgtccacacgccaattagtgtgatcacgctaaggcctaagtacggtcttttgccgaatggagtgtccaaagaagcgaagaaccctaatgcgttgctctccttctctagcgggccgaggtcgtgcatcgggcagaacttcgccatgttggaggcgaaggctgtcatcaccatgatcttgcaaaggttctcctttacactatcccccaacaagacagcaaccagctgtaccaagcaagcagaacatgaacggttgattgattcaggcgaagaaattcagaacttgttcgatctgctggccatgggtttcgagtggacggtggcgacggccgcggcggcggtggcggcgtcgtgggcgttcatcgcggtggtggtgaagctggtgtggtggccccgcgccatcaccaggcggctgggggcgcagggcgtcgccgggccgggatacaggttcttctccggcaacctcagcgagatcaggcgtctccgcgccgagggcgccaaccttgtgctcgacgtctcctcccatgacttcgtccccatcgtgcagccacacatccgcaaatggattcccctctacgggaagacgttcttgtattggttcgggacacggccaaacatatgcttggcggatatgaacatggtgaggcaggtgttgtcggaccgtacagggatgttccccaagtacatagataatatgcagttcgcacgcctgcttggtaaggggctcgtgctcaccgacgacgacgagtggaaacgccactacaaggtggttcacccagccttcgacatggacaaactcaagatgatgacggagaccatatccgactgcgcccgatcaatgatgtttgagtgggaatcggagttggggatgaagggcggaagcacggagattgaactgagccggtggtttgaggagctcactgctgatgtgatttcgcgtacggcatttgggagcagctacagggaggggaagcaggtcttcctagcacagaggaagctccaatttcttgccttctccgcgtttctcaccatccaaatcccagggttcagctacctcctgaccaaaaagaatctgaagacatggtcactagacaagaaggtgaggagcatgctcatgaacattatcaagagtcgactcactaacaaagaaaccatgggatatgggaatgacctgcttggattgatgttagaggcatgcgtgccagagcatggcgggagccagccacaactcagcatggacgatatcatcgctgagtgcaagaccttcttcttcgctgggcatgacaccacctcgcaattgctcacttggaccatgttcttgcttagcacacaccaacattggatggagaaactcagaaaggaggttaggatggtgtgcaatgacgaggtgcccaccggagacatgctcaacaagttgaaattggtcaacatgttccttctcgagaccctaaggttgtatggccctgtctcactcataacgaggagagctggtaccgacgtcaagcttggtagcatcaaggttcctaaaggcaccatcctaacgatcccgatcgcaacaatccaccgtgacaaggaagtgtggggggaggacgccgatgagttcaagccagagaggttcgagaatggagtgttaaaggcagcgaagcaccccagcgcactactctccttctctatcgggctaaggtcgtgcatcgggcaaaactttgccatgattgaggccaagaccatcatcgccatgatcctgcaaaggttctccttcacgttgtcccctaagtacgtccacacgccaatcagtgtgatcacgctaaggcctaagtatggtcttccaatgatccttaggagcctcaaggtctcaccaaccagccgatcgaagcagaagcagagctacagtataggcgtacgtactccggcgactggttcaggtgatctcgcggcgtacgtctag
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| Protein seq | MGNFVWMVAAAAAAVASWAFIAVVVKLVWRPRAISRRLRAQGVGGPGYRFFSGNLGEIRRLRAEGAGVVLDVSSHDFVPIVQPHFRKWVSLYGKTFLFWFRAQPNICLADINIVRQVLSDRTGMYPKDLTNPYFAHLLGKGLVLIDGDEWKRHYKVVHPAFDMDKLKMMTVTISDCTGSMMSEWESELGMKGGSVEIELSQRFQELTADVISRTAFGSSYSEGKQVFLAQRKLQFLAFSMFLTIQIPGFRYLPTKKNLKIWSLDKKVRSMLTNIIKIRLANKDTMGYGNDLLGLMLETCAPEHDESQQLSMDEIIAECKTFFFGGHDTTSHLLTWTMFLLSTHPEWMRKIRKEVTTMCGDEVPTGDMLNKMNLLNMFLLETLRLYGPVSLISRRTGTNAKFGGIKVPEGTILRIPIATIHRDKEVWGEDADEFKPARFENGVSKAAKHPNALLSFSNGPRSCIGQNFAMIEAKAVITMILQRFSFTLSPKYVHTPISVITLRPKYGLLPNGVSKEAKNPNALLSFSSGPRSCIGQNFAMLEAKAVITMILQRFSFTLSPNKTATSCTKQAEHERLIDSGEEIQNLFDLLAMGFEWTVATAAAAVAASWAFIAVVVKLVWWPRAITRRLGAQGVAGPGYRFFSGNLSEIRRLRAEGANLVLDVSSHDFVPIVQPHIRKWIPLYGKTFLYWFGTRPNICLADMNMVRQVLSDRTGMFPKYIDNMQFARLLGKGLVLTDDDEWKRHYKVVHPAFDMDKLKMMTETISDCARSMMFEWESELGMKGGSTEIELSRWFEELTADVISRTAFGSSYREGKQVFLAQRKLQFLAFSAFLTIQIPGFSYLLTKKNLKTWSLDKKVRSMLMNIIKSRLTNKETMGYGNDLLGLMLEACVPEHGGSQPQLSMDDIIAECKTFFFAGHDTTSQLLTWTMFLLSTHQHWMEKLRKEVRMVCNDEVPTGDMLNKLKLVNMFLLETLRLYGPVSLITRRAGTDVKLGSIKVPKGTILTIPIATIHRDKEVWGEDADEFKPERFENGVLKAAKHPSALLSFSIGLRSCIGQNFAMIEAKTIIAMILQRFSFTLSPKYVHTPISVITLRPKYGLPMILRSLKVSPTSRSKQKQSYSIGVRTPATGSGDLAAYV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_07g0024360 | OsLima_07g0024360.02 | Chr07 | 27402889 | 27405691 | + | NAM | ||
| CDS seq | atgggtaatctggggtggatggtggcggcggcggtggcggcggtggtggcgtcgtgggcgttcgacgcggtggtgaagctggtgtggaggccccgcgccatcaccaggcggctgcgggcgcagggcgtcggcgggccgggataccggttcttctccggcaacctcggcgagatcaagcggctccgcgacgagggcgccggcgtcgtgctcgacgtctcctcccatgacttcgtccccatcgtgcagccgcacttccgcaaatggatccccctctatgggaagacattcatgtattggttcggagcgcggcctaccatttgcttggcagacgtgagcatggtaaggcaggtgttatcggaccggacggggatgtaccctaagaacgtgtcgaacccatacttcgcacgactactcggcaaggggcttgtgctcaccgacggcgatgagtggaagcgccaccgcaaagtagtccacccggcatttaacatggacaagctcaagatgatgactgtgactatgtccgattgtgcccaatctatgatttccgagtgggaatccgagttggggacaaagggcgatatagtggagatcgagctgagccgacgattcgaggagcttaccgctgatgtgatctcgcacacagcattcgggagcagctataaggaggggaagcaagtgttcttggcacaaagagagcttcaatttcttgccttctccaccttccttagcattcaaatcccggggtccagctatctcccgaccaagaagaacctaaaaacatggtcagtggacaagaaggtgagaagcatgctcacggacatcatcaagagccggctcaacaacaaagatgtcgcaggatacgggaacgacctgctcggattaatgctggaggcatgcgcaccggagcacggggagagccagccacaacttagtatggacgagatcatcgccgagtgcaagacattcttctttgcagggcacgacaccacctcacaccttctcacatggaccatgttcctattgagcacacatccagagtggcaggagaagctcagggaggaggtggcaacggagtgtgacggcaaggtgcccaccggtgacatgctcaacaagctgaagctagtcaacatgttcctcctcgagaccctgaggttgtatggccctgttgcattcatacagaggagggtcaacgccgaactagaactcggcggcatcacggtccctgagggcactgtcctatcgattccgattgcaacaatccaccgcgataaggaggtgtggggcgaggacgccgacatattcaagccggagaggttcgagaatggggtgtcaaaggcgggaaaatatcccaacgcgttgctctccttctccagtgggccgagggcatgcattggacagaacttcgccatgatcgaggccaaggccgtaattgcaatgatcctacagaggttctcctttactctatcacccaagtacgtccacgcgccaaccgacgtgatcacgcttcggccaaagtatgggctgcctatgatcctcaagagtctcaagctcatcagccaagaaattgactag
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| Protein seq | MGNLGWMVAAAVAAVVASWAFDAVVKLVWRPRAITRRLRAQGVGGPGYRFFSGNLGEIKRLRDEGAGVVLDVSSHDFVPIVQPHFRKWIPLYGKTFMYWFGARPTICLADVSMVRQVLSDRTGMYPKNVSNPYFARLLGKGLVLTDGDEWKRHRKVVHPAFNMDKLKMMTVTMSDCAQSMISEWESELGTKGDIVEIELSRRFEELTADVISHTAFGSSYKEGKQVFLAQRELQFLAFSTFLSIQIPGSSYLPTKKNLKTWSVDKKVRSMLTDIIKSRLNNKDVAGYGNDLLGLMLEACAPEHGESQPQLSMDEIIAECKTFFFAGHDTTSHLLTWTMFLLSTHPEWQEKLREEVATECDGKVPTGDMLNKLKLVNMFLLETLRLYGPVAFIQRRVNAELELGGITVPEGTVLSIPIATIHRDKEVWGEDADIFKPERFENGVSKAGKYPNALLSFSSGPRACIGQNFAMIEAKAVIAMILQRFSFTLSPKYVHAPTDVITLRPKYGLPMILKSLKLISQEID
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_07g0024360 | OsLima_07g0024360.03 | Chr07 | 27403711 | 27404940 | + | IsoSeq | ||
| CDS seq | atgcattggacagaacttcgccatgatcgaggccaaggccgtaattgcaatgatcctacagaggttctcctttactctatcacccaagtacgtccacgcgccaaccgacgtgatcacgcttcggccaaagtatgggctgcctatgatcctcaagagtctcaaggtgtagaagttgtt |
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| Protein seq | MHWTELRHDRGQGRNCNDPTEVLLYSITQVRPRANRRDHASAKVWAAYDPQESQGVEVV |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.072798 | 0.508891 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0418500 | RBH | 0.0 | 0.257456 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g44110 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0635200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0012020 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0024670 | RBH | 0.000000 | 0.000000 | 1.519489 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0011850 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0011750 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0011750 | SBH | 0.0 | 0.0 | 1.002473 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0433000 | RBH | 63.9028055 | 47.0452215 | 96.268711 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0012240 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0444600 | RBH | 20.8971815 | 9.7736715 | 10.0450955 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0018970 | RBH | 0.066479 | 0.160468 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0011720 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0011710 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0012030 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0011840 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G011750 | RBH | 0.0 | 1.190667 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0011550 | RBH | 0.0 | 0.0 | 0.723598 |
