Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_07g0024430 | OGI:07038620 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr07:27014939-27038868 | ||||||||
| Gene Symbol | CYP709C9, OsCYP709C9, CYP709C5, OsCYP709C5 | ||||||||||
| DNA seq | atgggtaatttcgtgtggatggtggcggcggcggcggcggcggtggcgtcgtgggcgttcatcgcggtggtggtgaagctggtgtggaggccccgcgccatcagcaggcggctgcgggcgcaggccgtcggcgggccgggatacaggttcttctccggcaacctcggcgagatcaggcgtctccgcgccgagggcgccggcgtcgtgctcgacgtctcctcccatgacttcgtccccatcgtgcagccgcacttccgcaaatgggtttccctctacggtatgccgtgttttctgaggtttagtttttcgatattttaaaatgccatgagtaccaattattttaatttgttagcttttatatatatatatatatatatatatatataTATttgtgtgcttattatgtgttgtagggaagacgttcttgttctggttcggggcacaaccgaacatatgcttggcggatataaacattgtgaggcaggtgttgtcggaccgtacggggatgtaccctaaggacttaactaacccatacttcgcacacctacttggcaaagggcttgtgctcatcgatggcgacgagtggaaacgccactacaaggtggtccacccagccttcgacatggacaagctcaagatgatgacggtgaccatatctgactgcactgggtcaatgatgtctgagtgggagtctgagttggggatgaaaggtggaagcgcggagattgaactgagtcagcggtttcaagagctcactgctgacgtgatctcgcgcacggcgtttgggagcagctatagtgaggggaagcaggtcttcctggcacaaaggaaactccagtttcttgccttctccatgtttctcaccatccaaatcccagggttccgctaccttccaactaaaaaaaacctaaagatatggtcactagacaagaaggtgaggagcatgctcacgaacatcatcaagattcggctcgctaacaaggacaccatgggatatgggaacgacttgcttggattgatgttggagacgtgcgcgccagagcatgacgaaagccagcagttgagcatggacgagatcattgccgagtgcaagaccttcttcttcggcgggcatgacactacctcgcacctactcacttggaccatgttcttgctgagcacacatccagagtggatgaggaagatcaggaaggaggtgacaactatgtgcggtgacgaagtgcccactggtgacatgctcaacaagatgaacttactcaacatgttccttctcgagactctaaggttgtacggccctgtctcactcatatcgaggaggactggcaccaatgccaaattcggtggcatcaaggtgcctgagggcaccatcctaaggatcccaatcgcaacaatccatcgtgacaaggaagtgtggggtgaggacgccgacgagttcaagccggcgaggttcgagaatggagtgtccaaggcagcgaagcaccccaacgcactactctccttctctaacgggccgaggtcatgcatcgggcagaatttcgccatgattgaggccaaagccgtcatcaccatgatcctgcagaggttctccttcacgttgtcccctaagtacgtccacacgccaattagtgtgatcacgctaaggcctaagtacggtcttccaatgatccttaggagcctcaaggtaaaaagagatctgtaagatccaaggaatgttttacttacactgcttttttagcaccgctttgttgtacacgagttgtcttgttcacaagtatttgcttcctaataatgttatcgtgtaatgtattgATatatatatttcagttatacaaaattgggatgtaaatttctctagtttgcttgttgattggatataagaagtttctctatttctagcatatcaaccaattagtctcttcagtcgagcaatatgatactttgtgagtccaatcaggccaaatggttgtcgacaatgtcatttacttgtcaatcaagacggaaaatagaatatacatgtagaaaaaaggagcaagtcttgaaagaaatgtaaaaattcaccaccTaaaaaatcaatatattattaactaaagagcaactccctcccgtttgtgtatactataagtcgatttgacttttcctctagtcaaacTtttttttaggtttagctaaatttatagcatagtttaacgatatctacaacatcaaattagtttcgttaaatatattattgtgtcgacggagtagatcacgactacggtatttgcagagtatggggatcgttggtgccagggtatacacgagattgagttaaaagagacggaaacaatgatttttatataggtttgggccccttatctctaaggtaatagccctagtcctattggccgaagccggtgttgctcttatttatcagaatcacacaagcacaatatttgggataaccaatctagtcgtcaacgacttggcggtatggaacaccacatgtagtcaatgacgaggtagtcttcctcctcgaatacgaacacggcgagatcagagatagcgctaaatatcttttgttggactctgaggcactagattgggtctgtctagatttatctccagcgtcgatgtttggtggcgtctattagtgtctattctgactgagcgtgtctattctagctaggcttgtcttagtcccccctagggagtcttgtatttatacctatagatgtcccattatctaagtagaaataggaagaccaatatggatatgatccgactagtcattgtagtttccatgtagagctctgcttctccttccttatccggaataccttcatatatgatgcatgattttgtataaaacttagtatatggtaggcttcgccgagctcaacccaaaactattgggtatgccttgtacataacactgacacattgaatatattttgataatatgtttgttttgtgttgaaaatatagttatattttcataaacttgatcaaacttAaaaaagttttactaaaaaaaatcaaagtgatttataatataaaatggagggagtagaagattattcactttcttgatacatatgacgccatcgacttttaaacatcgttccacaattcatctcattaaaaaattaacctttagttataaaataggtcgcaacaaaataaataataattatgtaattttgtaaataacacgaatggtactattcaaatatgtagctcttatctaaaatcaggtgttcctctagttgaccggaaaagtcacatgcagaagacaattaaggccaggttacaatgagacgaagggaaacaatgtttaaataatactccctccatctacttttgatagtcatatttcatcttgacacacagatcaaggataagtaattctacttatcatttaaacatgctactagttattcctcgtaaacaagcgattcattaatatttacatttctcgatgcccaggtagccaatcttgtgtgtgagaatagagagtcacgcattaaatccaagaaagtcattaagaggatagattgttggattgaaatatgcctatcaaaaataaatttttcagatttagaaatatgactatcaaaaatagatggagggagtaaatagaaaagtttataaggttcacctactaggagagaaagggagacactgtttcaatagaagagtttataagatccagctactaggagagaaagggagactatttaaataaaaagtttataaggtccagctactaggagagaaagggagacaatgttttttttaaaaaaaaatgtttaatatgttattcattaaatagctcaaagaaacaaatacttcatatgctctgtttgtataaccggtgacttcagtgttgacttgcaactcgcaacagccacatctcaaaagaggtagggcttatttggtttagtgccctattaaaataataatagtgttaaaatcttgataagttttaacgtgttataaagaaaaggtatgtttggattgatgttatttagaagtcaaattttgtatagtagtgaaggaagtttaataactatgccaaattaaacatttttattaccaacttattggattcaaaccaaactatctcatttactattcaaactatcaaaatatattttggtagacatgttttagcatcaatccgaaatgacctggtgtaccttttttagcgattggctcaacacggtcgtttgacagtgggcttaaaggaggcccaatacatgcgggagtcagcgaaagagcaccagaagaagcccatgccatcccattcggatcggcacatgctctcaaaaacggcccagtcgagccattcgtacaagccgccggcggcgagatttgttttacaacaattactacctaagccccgaaaagtaatttatggaataagtacgacatatttacaaacAaaaaataatttataaataaaacttctatatacgtgttcttagcgatctaagaggctaaaaaataaacttcgataaaaaaccacaaaatttgctctaaatttaaggttgaaaattcaaattttggcagataagcataagcataagcgaaaagatgaggcctccatctttgtgtctagataagcataaacataaacgaaaagatgaggcctccatctttgtgtcctccaaacgcgtacacttcagataaaaaagaaagttgttcagtttcaaatattagtttggcgctacataagtttctattttccgtgaatttaccgctagcacacgctacctatatattctcctgagttttcacttggtcattaattcgtgttttgaggtcttttgccgaatggagtgtccaaagaagcgaagaaccctaatgcgttgctctccTtctctagcgggccgaggtcgtgcatcgggcagaacttcgccatgttggaggcgaaggctgtcatcaccatgatcttgcaaaggttctcctttacactatcccccaagtatgtccacgcaccaaccagtttgatcacactg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| CDS seq | atgggtaatttcgtgtggatggtggcggcggcggcggcggcggtggcgtcgtgggcgttcatcgcggtggtggtgaagctggtgtggaggccccgcgccatcagcaggcggctgcgggcgcaggccgtcggcgggccgggatacaggttcttctccggcaacctcggcgagatcaggcgtctccgcgccgagggcgccggcgtcgtgctcgacgtctcctcccatgacttcgtccccatcgtgcagccgcacttccgcaaatgggtttccctctacgggaagacgttcttgttctggttcggggcacaaccgaacatatgcttggcggatataaacattgtgaggcaggtgttgtcggaccgtacggggatgtaccctaaggacttaactaacccatacttcgcacacctacttggcaaagggcttgtgctcatcgatggcgacgagtggaaacgccactacaaggtggtccacccagccttcgacatggacaagctcaagatgatgacggtgaccatatctgactgcactgggtcaatgatgtctgagtgggagtctgagttggggatgaaaggtggaagcgcggagattgaactgagtcagcggtttcaagagctcactgctgacgtgatctcgcgcacggcgtttgggagcagctatagtgaggggaagcaggtcttcctggcacaaaggaaactccagtttcttgccttctccatgtttctcaccatccaaatcccagggttccgctaccttccaactaaaaaaaacctaaagatatggtcactagacaagaaggtgaggagcatgctcacgaacatcatcaagattcggctcgctaacaaggacaccatgggatatgggaacgacttgcttggattgatgttggagacgtgcgcgccagagcatgacgaaagccagcagttgagcatggacgagatcattgccgagtgcaagaccttcttcttcggcgggcatgacactacctcgcacctactcacttggaccatgttcttgctgagcacacatccagagtggatgaggaagatcaggaaggaggtgacaactatgtgcggtgacgaagtgcccactggtgacatgctcaacaagatgaacttactcaacatgttccttctcgagactctaaggttgtacggccctgtctcactcatatcgaggaggactggcaccaatgccaaattcggtggcatcaaggtgcctgagggcaccatcctaaggatcccaatcgcaacaatccatcgtgacaaggaagtgtggggtgaggacgccgacgagttcaagccggcgaggttcgagaatggagtgtccaaggcagcgaagcaccccaacgcactactctccttctctaacgggccgaggtcatgcatcgggcagaatttcgccatgattgaggccaaagccgtcatcaccatgatcctgcagaggttctccttcacgttgtcccctaagtacgtccacacgccaattagtgtgatcacgctaaggcctaagtacggtcttttgccgaatggagtgtccaaagaagcgaagaaccctaatgcgttgctctccTtctctagcgggccgaggtcgtgcatcgggcagaacttcgccatgttggaggcgaaggctgtcatcaccatgatcttgcaaaggttctcctttacactatcccccaagcgaagaaattcagaacttgttcgatctgctggccatgggtttcgagtggacggtggcgacggccgcggcggcggtggcgcgtcgtgggcgttcatcgcggtggtggtgaagctggtgtggtggccccgcgccatcactaggcggctgggggcgcagggcgtcgccgggccgggatacaggttcttctccggcaacctcagcgagatcaggcgtctccgcgccgagggcgccaaccttgtgctcgacgtctcctcccatgacttcgtccccatcgtgcagccacacatccgcacatggattcccctctacgggaagacgttcttgtattggttcgggacacggccaaacatatgcttggcggatatgaacatggtgaggcaggtgttgtcggaccgtacagggatgttccccaagtacatagataacatgcagttcgcacgcctgcttggtaaggggctcgtgctcaccgacgacgacgagtggaaacgccactacaaggtggttcacccagccttcgacatggacaagctcaagatgatgacggagaccatatccgactgcgcccgatcaatgatgtttgagtgggaatcggagttggggatgaagggcggaagcacgGAgattgaactgagCcggtggtttgaggagctcactgttgatgtgatttcgcgtacggcatttgggagcatctacagggaggggaagcaggtcttcctagcacagaggaagctccaatttcttgcctTCtccgcgtttctcaccatccaaatcccagggttcagctacctcctgaccaaaaagaatatgaagacatggtcactagacaagaaggtgaggagcatgctcatgaacattatcaagagtcgactcactaacaaagaaaccatgggatatgggaatgacctgcttggattgatgttagaggcatgcgtgccagagcatggcgggagccagccacaactcagcatggacgatatcatcgctgagtgcaagaccttcttcttcgctgggcatgacaccacctcgcaattgctcacttggaccatgttcttgcttagcacacaccaacattggatggagaaactcagaaaggaggttaggatggtgtgcaatgacgaggtgcccaccggagacatgctcaacaagttgaaattggtcaacatgttccttctcgagaCcctaaggttgtatggccctgtctcactcgtaacaaggagagatggtaccgacgtcaagcttggtagcatcaaggttcctaagggcaccatcctaacaatcccgatcgcaacaatccaccgtgacaaggaagtgtggggggaggacgccgatgagttcaagccagagaggttcgagaatggagtgttgaaggcagcgaagcaccccagcgcactactctccttctctatcgggctaaggtcgtgcatcgggcaaaactttgccatgatcgaggccaagaccatcatcgccatgatcctgcaaaggttctccttcacgttgtcccctaagtacgtccacacgccaatcagtgtgatcacgctaaggcctaagtatggtcttccaatgatccttaggagcctcaaggtaaagagagatagccgatcgaagcagaagcagagctacagtataggcgtacgtactccggcgactggttcaggtgatctcgcggcgtacgtctag
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| Protein seq | MGNFVWMVAAAAAAVASWAFIAVVVKLVWRPRAISRRLRAQAVGGPGYRFFSGNLGEIRRLRAEGAGVVLDVSSHDFVPIVQPHFRKWVSLYGKTFLFWFGAQPNICLADINIVRQVLSDRTGMYPKDLTNPYFAHLLGKGLVLIDGDEWKRHYKVVHPAFDMDKLKMMTVTISDCTGSMMSEWESELGMKGGSAEIELSQRFQELTADVISRTAFGSSYSEGKQVFLAQRKLQFLAFSMFLTIQIPGFRYLPTKKNLKIWSLDKKVRSMLTNIIKIRLANKDTMGYGNDLLGLMLETCAPEHDESQQLSMDEIIAECKTFFFGGHDTTSHLLTWTMFLLSTHPEWMRKIRKEVTTMCGDEVPTGDMLNKMNLLNMFLLETLRLYGPVSLISRRTGTNAKFGGIKVPEGTILRIPIATIHRDKEVWGEDADEFKPARFENGVSKAAKHPNALLSFSNGPRSCIGQNFAMIEAKAVITMILQRFSFTLSPKYVHTPISVITLRPKYGLLPNGVSKEAKNPNALLSFSSGPRSCIGQNFAMLEAKAVITMILQRFSFTLSPKRRNSELVRSAGHGFRVDGGDGRGGGGASWAFIAVVVKLVWWPRAITRRLGAQGVAGPGYRFFSGNLSEIRRLRAEGANLVLDVSSHDFVPIVQPHIRTWIPLYGKTFLYWFGTRPNICLADMNMVRQVLSDRTGMFPKYIDNMQFARLLGKGLVLTDDDEWKRHYKVVHPAFDMDKLKMMTETISDCARSMMFEWESELGMKGGSTEIELSRWFEELTVDVISRTAFGSIYREGKQVFLAQRKLQFLAFSAFLTIQIPGFSYLLTKKNMKTWSLDKKVRSMLMNIIKSRLTNKETMGYGNDLLGLMLEACVPEHGGSQPQLSMDDIIAECKTFFFAGHDTTSQLLTWTMFLLSTHQHWMEKLRKEVRMVCNDEVPTGDMLNKLKLVNMFLLETLRLYGPVSLVTRRDGTDVKLGSIKVPKGTILTIPIATIHRDKEVWGEDADEFKPERFENGVLKAAKHPSALLSFSIGLRSCIGQNFAMIEAKTIIAMILQRFSFTLSPKYVHTPISVITLRPKYGLPMILRSLKVKRDSRSKQKQSYSIGVRTPATGSGDLAAYV |
||||||||||
| Function | Cytochrome P450 709B2 [UniProtKB/Swiss-Prot:F4IK45] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_07g0024430 | OsGoSa_07g0024430.02 | Chr07 | 27030310 | 27038868 | + | NAM | ||
| CDS seq | atgggtaatctggggtggatggtggcggcggcggtggcggcggtggtggcgtcgtgggcgttcgacgcggtggtgaagctggtgtggaggccccgcgccatcaccaggcggctgcgggcgcagggcgtcggcgggccgggataccggttcttctccggcaacctcggcgagatcaagcggctccgcgacgagggcgccggcgtcgtgctcgacgtctcctcccatgacttcgtccccatcgtgcagccgcacttccgcaaatggatccccctctatgggaagacattcatgtattggttcggagcgcggcctaccatttgcttggcagacgtgagcatggtgaggcaggtgttatcggaccggacggggatgtaccctaagaacgtgtcaaacccatacttcgcacgactactcggcaaggggcttgtgctcaccgacggcgatgagtggaagcgccaccgcaaagtagtccacccggcatttaacatggacaagctcaagatgatgactgtgactatgtccgattgtgcccaatctatgatttccgagtgggaatccgagttggggacaaagggcgatatagtggagatcgagctgagccgacgattcgaggagcttactgctgatgtgatctcgcacacagcattcgggagcagctataaggaggggaagcaagtgttcttggcacaaagagagcttcaatttcttgccttctccaccttccttagcatccaaatcccggggtccagctacctcccgaccaagaagaacctaaagacatggtcagtggacaagaaggtgagAagcatgctcacggacatcatcaagagccggctcaacaacaaagatgtcgcaggatacgggaacgacctgctcggattaatgctggaggcatgcgcaccggagcacggggagagccagccacaacttagtatggacgagatcatcgccgagtgcaagacattcttctttgcaggacacgacaccacctcacaccttctcacatggaccatgttcctattgagcacacatccagagtggcaggagaagctcagggaggaggtggcaatggagtgtgacggcaaggtgcccaccggtgacatgctcaacaaGCTgaagctagtcaacatgttcctcctcgagaccctgaggttgtatggccctgttgcattcatacagaggagggtcaacgccgagctagaactcggcggcatcacggtccctgagggcactgtcctatcgattccgattgcaacaatccaccgcgataaggaggtgtggggcgaggacgccgacatattcaagccggagaggttcgagaatggggtgtcaaaggcgggAaaatatcccaacgcgttgctctccttctccagtgggccgagggcatgcattgggcagaacttcgccatgatcgaggccaaggccgtaattgcaatgatcctacagaggttctcctttactctatcacccaagtacgtccacgcgccaaccgacgtgatcacgcttcggccaaagtatgggctgcctatgatcctcaagagtctcaagggcgtgcgcggccccgggtacaggctgctcgtcgggagcctcggcgacatcaacaagctccgcgcggacgccgccggcgccggcggcgccgcggcgctcgacgtcgcctcccacgacttcatccccttcgtccagcctcagttccgccaatggatccctctctacgggcgagtgttcttgtactggtttggatggacgccggacatgtgcgtggccgacgtcgaggtggcgaagcaggtgctctcggacaggacagggctgttccccaagaacgtgacgacaccgatgctgctcaagctgttcggcagggggctcgtcctggccaacggcgacgagtggcagcgacacaagaaggtcgtccaccccgccttcaacacggacaagctcaagatgatgacggcgacaatggccggcgtcgcacggtcgatggtgtcgaggtgggaggagaaggtggcgagccatggcgggaaggtggtgatcgagctgagcagccagttcgaggagctgactgcggacgtgatctctcacacggcgtTCcggagcagctacgcggaggggaagcaggttttcatggcgatcaaggagctccagttcatcgccttctcaagccttctcagcgtccaaatcccaggctccaggtattttccaaccaagaagaatctgaaagtatggaggctggacaggaaggtgaggagtacgctgatgcagatcatcagcaacagactcgccgccgccgcgaaggagaaggccggcggcggtggcggtggctacggcgaggacctgctcgggctgatgctggaggccagcgcgccaccggagctgggcacgaagcgtcgtcagccgccggtgctgagcatggacgagatcatcgacgagtgcaAGaccttcttctttgccgggcaggagaccacctcgcacctcctctcctggaccatgtttcttctcagcacgcacccggactggcaggacaagctccgggaagaagccctaaatcagttcttgctggagacgctgcggctgtacagcccggtgccggcgatccggaggcggacggcggcggcggtggagatgggcggcgtgacggtgccgggaggcacgatgctgacgttcccgatcgcgacgatgcaccgcgacgaggaggtgtggggcgccgacgccGgggtgttcgacccgatgaggttcgacggcggcggcggcgccatggccaagctgctgtccttctccacggggccgagggcgtgcgtcgggcagagcttcgccatggtcgaggcgaaggccgtcgtcgccgcgatactccggcggttcaggctggagctctcgccggagtacgtccacgcgcccaccgacatcgttcacttttggtaa
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| Protein seq | MGNLGWMVAAAVAAVVASWAFDAVVKLVWRPRAITRRLRAQGVGGPGYRFFSGNLGEIKRLRDEGAGVVLDVSSHDFVPIVQPHFRKWIPLYGKTFMYWFGARPTICLADVSMVRQVLSDRTGMYPKNVSNPYFARLLGKGLVLTDGDEWKRHRKVVHPAFNMDKLKMMTVTMSDCAQSMISEWESELGTKGDIVEIELSRRFEELTADVISHTAFGSSYKEGKQVFLAQRELQFLAFSTFLSIQIPGSSYLPTKKNLKTWSVDKKVRSMLTDIIKSRLNNKDVAGYGNDLLGLMLEACAPEHGESQPQLSMDEIIAECKTFFFAGHDTTSHLLTWTMFLLSTHPEWQEKLREEVAMECDGKVPTGDMLNKLKLVNMFLLETLRLYGPVAFIQRRVNAELELGGITVPEGTVLSIPIATIHRDKEVWGEDADIFKPERFENGVSKAGKYPNALLSFSSGPRACIGQNFAMIEAKAVIAMILQRFSFTLSPKYVHAPTDVITLRPKYGLPMILKSLKGVRGPGYRLLVGSLGDINKLRADAAGAGGAAALDVASHDFIPFVQPQFRQWIPLYGRVFLYWFGWTPDMCVADVEVAKQVLSDRTGLFPKNVTTPMLLKLFGRGLVLANGDEWQRHKKVVHPAFNTDKLKMMTATMAGVARSMVSRWEEKVASHGGKVVIELSSQFEELTADVISHTAFRSSYAEGKQVFMAIKELQFIAFSSLLSVQIPGSRYFPTKKNLKVWRLDRKVRSTLMQIISNRLAAAAKEKAGGGGGGYGEDLLGLMLEASAPPELGTKRRQPPVLSMDEIIDECKTFFFAGQETTSHLLSWTMFLLSTHPDWQDKLREEALNQFLLETLRLYSPVPAIRRRTAAAVEMGGVTVPGGTMLTFPIATMHRDEEVWGADAGVFDPMRFDGGGGAMAKLLSFSTGPRACVGQSFAMVEAKAVVAAILRRFRLELSPEYVHAPTDIVHFW
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_07g0024430 | OsGoSa_07g0024430.01 | Chr07 | 27014939 | 27030482 | + | NAM | ||
| CDS seq | atgggtaatttcgtgtggatggtggcggcggcggcggcggcggtggcgtcgtgggcgttcatcgcggtggtggtgaagctggtgtggaggccccgcgccatcagcaggcggctgcgggcgcaggccgtcggcgggccgggatacaggttcttctccggcaacctcggcgagatcaggcgtctccgcgccgagggcgccggcgtcgtgctcgacgtctcctcccatgacttcgtccccatcgtgcagccgcacttccgcaaatgggtttccctctacgggaagacgttcttgttctggttcggggcacaaccgaacatatgcttggcggatataaacattgtgaggcaggtgttgtcggaccgtacggggatgtaccctaaggacttaactaacccatacttcgcacacctacttggcaaagggcttgtgctcatcgatggcgacgagtggaaacgccactacaaggtggtccacccagccttcgacatggacaagctcaagatgatgacggtgaccatatctgactgcactgggtcaatgatgtctgagtgggagtctgagttggggatgaaaggtggaagcgcggagattgaactgagtcagcggtttcaagagctcactgctgacgtgatctcgcgcacggcgtttgggagcagctatagtgaggggaagcaggtcttcctggcacaaaggaaactccagtttcttgccttctccatgtttctcaccatccaaatcccagggttccgctaccttccaactaaaaaaaacctaaagatatggtcactagacaagaaggtgaggagcatgctcacgaacatcatcaagattcggctcgctaacaaggacaccatgggatatgggaacgacttgcttggattgatgttggagacgtgcgcgccagagcatgacgaaagccagcagttgagcatggacgagatcattgccgagtgcaagaccttcttcttcggcgggcatgacactacctcgcacctactcacttggaccatgttcttgctgagcacacatccagagtggatgaggaagatcaggaaggaggtgacaactatgtgcggtgacgaagtgcccactggtgacatgctcaacaagatgaacttactcaacatgttccttctcgagactctaaggttgtacggccctgtctcactcatatcgaggaggactggcaccaatgccaaattcggtggcatcaaggtgcctgagggcaccatcctaaggatcccaatcgcaacaatccatcgtgacaaggaagtgtggggtgaggacgccgacgagttcaagccggcgaggttcgagaatggagtgtccaaggcagcgaagcaccccaacgcactactctccttctctaacgggccgaggtcatgcatcgggcagaatttcgccatgattgaggccaaagccgtcatcaccatgatcctgcagaggttctccttcacgttgtcccctaagtacgtccacacgccaattagtgtgatcacgctaaggcctaagtacggtcttttgccgaatggagtgtccaaagaagcgaagaaccctaatgcgttgctctccTtctctagcgggccgaggtcgtgcatcgggcagaacttcgccatgttggaggcgaaggctgtcatcaccatgatcttgcaaaggttctcctttacactatcccccaagcgaagaaattcagaacttgttcgatctgctggccatgggtttcgagtggacggtggcgacggccgcggcggcggtggcgcgtcgtgggcgttcatcgcggtggtggtgaagctggtgtggtggccccgcgccatcactaggcggctgggggcgcagggcgtcgccgggccgggatacaggttcttctccggcaacctcagcgagatcaggcgtctccgcgccgagggcgccaaccttgtgctcgacgtctcctcccatgacttcgtccccatcgtgcagccacacatccgcacatggattcccctctacgggaagacgttcttgtattggttcgggacacggccaaacatatgcttggcggatatgaacatggtgaggcaggtgttgtcggaccgtacagggatgttccccaagtacatagataacatgcagttcgcacgcctgcttggtaaggggctcgtgctcaccgacgacgacgagtggaaacgccactacaaggtggttcacccagccttcgacatggacaagctcaagatgatgacggagaccatatccgactgcgcccgatcaatgatgtttgagtgggaatcggagttggggatgaagggcggaagcacgGAgattgaactgagCcggtggtttgaggagctcactgttgatgtgatttcgcgtacggcatttgggagcatctacagggaggggaagcaggtcttcctagcacagaggaagctccaatttcttgcctTCtccgcgtttctcaccatccaaatcccagggttcagctacctcctgaccaaaaagaatatgaagacatggtcactagacaagaaggtgaggagcatgctcatgaacattatcaagagtcgactcactaacaaagaaaccatgggatatgggaatgacctgcttggattgatgttagaggcatgcgtgccagagcatggcgggagccagccacaactcagcatggacgatatcatcgctgagtgcaagaccttcttcttcgctgggcatgacaccacctcgcaattgctcacttggaccatgttcttgcttagcacacaccaacattggatggagaaactcagaaaggaggttaggatggtgtgcaatgacgaggtgcccaccggagacatgctcaacaagttgaaattggtcaacatgttccttctcgagaCcctaaggttgtatggccctgtctcactcgtaacaaggagagatggtaccgacgtcaagcttggtagcatcaaggttcctaagggcaccatcctaacaatcccgatcgcaacaatccaccgtgacaaggaagtgtggggggaggacgccgatgagttcaagccagagaggttcgagaatggagtgttgaaggcagcgaagcaccccagcgcactactctccttctctatcgggctaaggtcgtgcatcgggcaaaactttgccatgatcgaggccaagaccatcatcgccatgatcctgcaaaggttctccttcacgttgtcccctaagtacgtccacacgccaatcagtgtgatcacgctaaggcctaagtatggtcttccaatgatccttaggagcctcaaggtaaagagagatagccgatcgaagcagaagcagagctacagtataggcgtacgtactccggcgactggttcaggtgatctcgcggcgtacgtctag
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| Protein seq | MGNFVWMVAAAAAAVASWAFIAVVVKLVWRPRAISRRLRAQAVGGPGYRFFSGNLGEIRRLRAEGAGVVLDVSSHDFVPIVQPHFRKWVSLYGKTFLFWFGAQPNICLADINIVRQVLSDRTGMYPKDLTNPYFAHLLGKGLVLIDGDEWKRHYKVVHPAFDMDKLKMMTVTISDCTGSMMSEWESELGMKGGSAEIELSQRFQELTADVISRTAFGSSYSEGKQVFLAQRKLQFLAFSMFLTIQIPGFRYLPTKKNLKIWSLDKKVRSMLTNIIKIRLANKDTMGYGNDLLGLMLETCAPEHDESQQLSMDEIIAECKTFFFGGHDTTSHLLTWTMFLLSTHPEWMRKIRKEVTTMCGDEVPTGDMLNKMNLLNMFLLETLRLYGPVSLISRRTGTNAKFGGIKVPEGTILRIPIATIHRDKEVWGEDADEFKPARFENGVSKAAKHPNALLSFSNGPRSCIGQNFAMIEAKAVITMILQRFSFTLSPKYVHTPISVITLRPKYGLLPNGVSKEAKNPNALLSFSSGPRSCIGQNFAMLEAKAVITMILQRFSFTLSPKRRNSELVRSAGHGFRVDGGDGRGGGGASWAFIAVVVKLVWWPRAITRRLGAQGVAGPGYRFFSGNLSEIRRLRAEGANLVLDVSSHDFVPIVQPHIRTWIPLYGKTFLYWFGTRPNICLADMNMVRQVLSDRTGMFPKYIDNMQFARLLGKGLVLTDDDEWKRHYKVVHPAFDMDKLKMMTETISDCARSMMFEWESELGMKGGSTEIELSRWFEELTVDVISRTAFGSIYREGKQVFLAQRKLQFLAFSAFLTIQIPGFSYLLTKKNMKTWSLDKKVRSMLMNIIKSRLTNKETMGYGNDLLGLMLEACVPEHGGSQPQLSMDDIIAECKTFFFAGHDTTSQLLTWTMFLLSTHQHWMEKLRKEVRMVCNDEVPTGDMLNKLKLVNMFLLETLRLYGPVSLVTRRDGTDVKLGSIKVPKGTILTIPIATIHRDKEVWGEDADEFKPERFENGVLKAAKHPSALLSFSIGLRSCIGQNFAMIEAKTIIAMILQRFSFTLSPKYVHTPISVITLRPKYGLPMILRSLKVKRDSRSKQKQSYSIGVRTPATGSGDLAAYV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_07g0024430 | OsGoSa_07g0024430.03 | Chr07 | 27038426 | 27038772 | + | IsoSeq | ||
| CDS seq | gcgccatggccaagctgctgtccttctccacggggccgagggcgtgcgtcgggcagagcttcgccatggtcgaggcgaaggccgtcgtcgccgcgatactccggcggttcaggctggagctctcgccggagtacgtccacgcgcccaccgacgtcatcacgctccgccccaagcacggcctccccatggtcgtcacacgcgtccacgcgtgacgtggatacaagcgattcgtcacccctcgggaggacgttatttgcatgtccatgt
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| Protein seq | APWPSCCPSPRGRGRASGRASPWSRRRPSSPRYSGGSGWSSRRSTSTRPPTSSRSAPSTASPWSSHASTRDVDTSDSSPLGRTLFACPC |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 6.788849 | 9.310127 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0635300 | RBH | 0.124761 | 0.522160 | 1.477277 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g44130 | RBH | 0.000000 | 0.310534 | 0.363384 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0419000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0012020 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0011780 | RBH | 0.0 | 0.0 | 1.410320 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0011850 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0011710 | RBH | 0.141753 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0011750 | RBH | 0.0 | 0.0 | 1.002473 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0433000 | RBH | 63.9028055 | 47.0452215 | 96.268711 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0025110 | RBH | 0.156677 | 0.756884 | 1.095535 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0444600 | RBH | 20.8971815 | 9.7736715 | 10.0450955 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0011670 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0011780 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0019060 | RBH | 5.012542 | 3.537233 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0012030 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0011840 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G024320 | SBH | 0.229475 | 0.549071 | 1.238085 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0011550 | SBH | 0.0 | 0.0 | 0.723598 |
