Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_07g0011670 | OGI:07038620 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr07:14105748-14108113 | ||||||||
| Gene Symbol | CYP709C5, OsCYP709C5 | ||||||||||
| DNA seq | atggccataggattattagcgtggatggtggcagcggccgcggcggcggtgctggcgtcgtgggcgttcagcgcggtggtgcacctggtgtggaggccccacgccatcagcaggcgcctccgggcacagggcgtgggcgggccgggctacaggttcttctccggcaacctcggagagatcaagaggttccgcggcgatggcgctggcgtcgtgctcaatgtttcctcccatgacttcctccccattgtgcagccacatttccgcaagtggatttccctatatggtaacctatttatccgagttcttttttttcttggatttatatatccgggTtcttttaatacactcatcagtcccaaatagtttagaataataattgtcatacttctaaaaattttgtcgaccatgggtaatttctcatatgcttacttttttttaaaaaaaagatatggcatgcataaatttgctaaattttatgaacttattgtactgtgtataaactgatgatgcttaaacTtttaaaagtttgaccgaatcttatatagttatacttaaaaaagttgaatattcatgatcggatggagttctggttttatatgagtatcataatttttagtgttagtttataatatttgtgcatttacgtattacaggaaggacattcctgtattggttcggagcatagccaaacatatgcttggctgacgtgagcatggtgcggcaggtattgtcagatcggacggggatataccccaagaacctgacgaactctcactttgtgcgtctacttggcaaagggcttgtgctcactgacggcgatgagtggaagcgccaccgcaaggtggtccacccggcctttaacatggacaagctcaagatgatgacgatgaccatgtctgactgctctcggtccatgatgtcggagtgggaatcggagttggcggcgaagggtggtcttgttgagattgagctaagcaggcgcttcgaggagctcactgccgatgtgatctcgcacacggcgtttggtagcagctacaaggaggggaagcaggtcttcctggcacagagggagctccaatttcttgccttctccaccttcctcactgttcaaattccagggtttaggtacacacattattaacttatcccaatacaaatagatttagaaagaacacaaaatgatatatcagtgcttttttttctgttttgaaaataaatcagctaccttccgaccatgaaaaactttttaagacatggtcgctcgacaagaaggtgaggggcatgctcatggacatcatcaagacccgacatgccaacaagaatgtagcttggtatgggaatgacctacttgggttgatgctggaggcgtgtgcgccggagcacggggagagctgcccacaactgagcatggatgagatcattgacgagtgcaagaccttcttttttgcagggcatgacaccacgtcacacttgctcacctggaccatgttcctattgagcacgcaCccagattggcaggagaaactaagggaggagattgcaatggagtgtggtgacaaggtgcccgctggtgacatgctcaacaagctaaagatggtcaacatgttcctcctagagaccctaaggctgtacagccctgtctcactcatacggaggaaggttggcactgatattgagctcggaggcatcaagatgcctgagggtgcactattgacgatcccgatcgcgacaattcaccgtgacaaggaagtgtggggggaggatgcggatgagtttaggccggagaggtttgagaatggggtgacgagggcagcgaaacaccccaacgcactactctccttctccagcggaccgaggtcatgcattgggcagaactttgcaatgatcgaggccaaggctgtcattgccatgatcctacagaggttctccttcactttgtcccccaagtacgtccatgcacccactgatgtgatcacgctgcgtcccaagtacgggctccctatgatcctcaagagcctcaagctgtagggagaaatacgtaagaaatatatgaattgtcctttctcttctataagagtttgccacttcgttggtatgagttatttagaactaattggttgtacatgatacatcaattttgttgatgttattcagacaatgtatttgtatatttcattttaacaaaatttggatgtggatttgctttttgattgggtgtaagaagttttgcttatttattgctcatcaaccaagtagcaatgtgatgtatgttacgtatctaaggtcagaaaaaaagaccatactcattgttgtgtaatactctaagtcaatatgtactttgtatacattacttcttgatactataa
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| CDS seq | atggccataggattattagcgtggatggtggcagcggccgcggcggcggtgctggcgtcgtgggcgttcagcgcggtggtgcacctggtgtggaggccccacgccatcagcaggcgcctccgggcacagggcgtgggcgggccgggctacaggttcttctccggcaacctcggagagatcaagaggttccgcggcgatggcgctggcgtcgtgctcaatgtttcctcccatgacttcctccccattgtgcagccacatttccgcaagcgcttcgaggagctcactgccgatgtgatctcgcacacggcgtttggtagcagctacaaggaggggaagcagctaccttccgaccatgaaaaactttttaagacatggtcgctcgacaagaaggtgaggggcatgctcatggacatcatcaagacccgacatgccaacaagaatgtagcttggtatgggaatgacctacttgggttgatgctggaggcgtgtgcgccggagcacggggagagctgcccacaactgagcatggatgagatcattgacgagtgcaagaccttcttttttgcagggcatgacaccacgtcacacttgctcacctggaccatgttcctattgagcacgcaCccagattggcaggagaaactaagggaggagattgcaatggagtgtggtgacaaggtgcccgctggtgacatgctcaacaagctaaagatggtcaacatgttcctcctagagaccctaaggctgtacagccctgtctcactcatacggaggaaggttggcactgatattgagctcggaggcatcaagatgcctgagggtgcactattgacgatcccgatcgcgacaattcaccgtgacaaggaagtgtggggggaggatgcggatgagtttaggccggagaggtttgagaatggggtgacgagggcagcgaaacaccccaacgcactactctccttctccagcggaccgaggtcatgcattgggcagaactttgcaatgatcgaggccaaggctgtcattgccatgatcctacagaggttctccttcactttgtcccccaagtacgtccatgcacccactgatgtgatcacgctgcgtcccaagtacgggctccctatgatcctcaagagcctcaagctgtag
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| Protein seq | MAIGLLAWMVAAAAAAVLASWAFSAVVHLVWRPHAISRRLRAQGVGGPGYRFFSGNLGEIKRFRGDGAGVVLNVSSHDFLPIVQPHFRKRFEELTADVISHTAFGSSYKEGKQLPSDHEKLFKTWSLDKKVRGMLMDIIKTRHANKNVAWYGNDLLGLMLEACAPEHGESCPQLSMDEIIDECKTFFFAGHDTTSHLLTWTMFLLSTHPDWQEKLREEIAMECGDKVPAGDMLNKLKMVNMFLLETLRLYSPVSLIRRKVGTDIELGGIKMPEGALLTIPIATIHRDKEVWGEDADEFRPERFENGVTRAAKHPNALLSFSSGPRSCIGQNFAMIEAKAVIAMILQRFSFTLSPKYVHAPTDVITLRPKYGLPMILKSLKL |
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| Function | Cytochrome P450 709B2 [UniProtKB/Swiss-Prot:F4IK45] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_07g0011670 | OsLima_07g0011670.01 | Chr07 | 14105748 | 14108113 | + | NAM | ||
| CDS seq | atggccataggattattagcgtggatggtggcagcggccgcggcggcggtgctggcgtcgtgggcgttcagcgcggtggtgcacctggtgtggaggccccacgccatcagcaggcgcctccgggcacagggcgtgggcgggccgggctacaggttcttctccggcaacctcggagagatcaagaggttccgcggcgatggcgctggcgtcgtgctcaatgtttcctcccatgacttcctccccattgtgcagccacatttccgcaagcgcttcgaggagctcactgccgatgtgatctcgcacacggcgtttggtagcagctacaaggaggggaagcagctaccttccgaccatgaaaaactttttaagacatggtcgctcgacaagaaggtgaggggcatgctcatggacatcatcaagacccgacatgccaacaagaatgtagcttggtatgggaatgacctacttgggttgatgctggaggcgtgtgcgccggagcacggggagagctgcccacaactgagcatggatgagatcattgacgagtgcaagaccttcttttttgcagggcatgacaccacgtcacacttgctcacctggaccatgttcctattgagcacgcaCccagattggcaggagaaactaagggaggagattgcaatggagtgtggtgacaaggtgcccgctggtgacatgctcaacaagctaaagatggtcaacatgttcctcctagagaccctaaggctgtacagccctgtctcactcatacggaggaaggttggcactgatattgagctcggaggcatcaagatgcctgagggtgcactattgacgatcccgatcgcgacaattcaccgtgacaaggaagtgtggggggaggatgcggatgagtttaggccggagaggtttgagaatggggtgacgagggcagcgaaacaccccaacgcactactctccttctccagcggaccgaggtcatgcattgggcagaactttgcaatgatcgaggccaaggctgtcattgccatgatcctacagaggttctccttcactttgtcccccaagtacgtccatgcacccactgatgtgatcacgctgcgtcccaagtacgggctccctatgatcctcaagagcctcaagctgtag
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| Protein seq | MAIGLLAWMVAAAAAAVLASWAFSAVVHLVWRPHAISRRLRAQGVGGPGYRFFSGNLGEIKRFRGDGAGVVLNVSSHDFLPIVQPHFRKRFEELTADVISHTAFGSSYKEGKQLPSDHEKLFKTWSLDKKVRGMLMDIIKTRHANKNVAWYGNDLLGLMLEACAPEHGESCPQLSMDEIIDECKTFFFAGHDTTSHLLTWTMFLLSTHPDWQEKLREEIAMECGDKVPAGDMLNKLKMVNMFLLETLRLYSPVSLIRRKVGTDIELGGIKMPEGALLTIPIATIHRDKEVWGEDADEFRPERFENGVTRAAKHPNALLSFSSGPRSCIGQNFAMIEAKAVIAMILQRFSFTLSPKYVHAPTDVITLRPKYGLPMILKSLKL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0419000 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g23570 | SBH | 0.0 | 0.167644 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0419000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0024620 | RBH | 0.0 | 5.121840 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0011780 | SBH | 0.0 | 0.0 | 1.410320 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0024530 | SBH | 0.000000 | 8.664426 | 1.697673 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0024450 | RBH | 0.584457 | 0.422069 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0011690 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0232900 | SBH | 0.0096085 | 0.7130745 | 0.267821 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0012180 | SBH | 0.0 | 0.0 | 0.373623 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0234700 | SBH | 0.366296 | 0.1114275 | 0.0380015 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0011730 | RBH | 0.082626 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0024500 | RBH | 0.210472 | 11.452056 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0024430 | RBH | 6.788849 | 9.310127 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0012030 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0024340 | SBH | 0.055726 | 1.310296 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G024320 | RBH | 0.229475 | 0.549071 | 1.238085 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0024350 | RBH | 0.000000 | 4.776464 | 5.837886 |
