Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os02g34770 | OGI:02001240 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr02:20849230-20851150 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTACTCGGGATCAAACCTATGAGGTTGTTTAAATAAAGCGATAAGTTCTTTAAGTTCACCAGGTAACCTAGTTCTTGAGGAATGTGTCCAGAAAGTTGGTTTTCAAAAAAGTGACAACTCAATGAGTTTAGTCAAATTCCCTAAGCTGGTTGGAATGGAACCTGTGAGCATGTTTTTGGAAAGTTCTAAATTCTCTAAATTCACAAGCTTACCTAGTTCTTGAGAAATATGCCTAGAAAATTGGTTTTCAAAAAGTGCTAAGTCAATAAGTTTAGTCAAATTCCCTAAGCAGTTTGGAATGGAACCTGTGAGCATGTTAAAGGAAAGATCTAATTTCTCTAAATTCACCAACTTACATAGTTCTTGAGAAATATGCCCTGAAAGTTGATTGTGCCAAAGAAACAAGTGGGAGAGTTTAGACAAATTCCCTAAGCTACTCGGGATCAAACTTGTGAGGTTGTTTGAATAAAGCGAAAAAGTTCTTTAAGTTCACCAGGTAACCTAGTTCTTGAGGAATGTGTCCATAAAGTTGGTTTTCAAAAAGTGACAAGTCAATGAGTTTAGTCAAATTCCCTAAGTTGTTTGGAATAGAACCTGTGAGCATGTTTTTGAAAAGTTCTAAATTCTCTAAATTCACTAGCTTACCTAGTTCTTGAGAAATATGACCAGAAAATTGGTTTTCAAAAAGTGCTAAGTCAGTGAGTTTAGTCAAATTCCCTAAGCAGTTTGGAATGGAACCTGTGAGCATGTTAAAGGAAAGATCTAATTTCTCTAAATTCACTAGCTTACATAGTTTTTGAGAAATATGCCCAGAAAGTTGTTTGTGCCAAAGAAACAAGTGGGAGAGTTTAGACAGATTCCCTAAGCTACGTGGGATCAAACCTGTGAAGTTGTTTGAATAAAGCGATAAGTTCTTTAAGTTCACAAGGTAACCTAGTTCTTGAGGAATGTGTCCAGAAAGTTGGTTTTTATAAAGTGATAAGACAGTGAGTTTAGTCAAATTCTCTAAGTTGTTTGGAATGGAACTTGAGAGCATGTTGTCACAAAGCCTTAGGCCCTTTAAGTTCACCAGGTAACCTAGTTCTTGAGGAATGTGCTCAGAAAGTTGGTTGTGACAAAGATCCAAGAGCGAGAGTTTAGTCAAATTCCCTAAGTTGTTTGGAATGTGCCCGGAAAGTTGATTGCCCCAAAGAATCAACACAGAGAGCTTAGCCAAGTTCCCAATACTGTTTGAAATGGAACTTGAAAGTTTGTTTATGCCAAGCCTCAAGTCTTCTAAGATCGCTAAGTTCCCAACTTCTTGAGGAATGCACCCAGAAAGTGTATTATATAGAGGTATAAGGTAGTGATTTTAGTCAGGTTCCCTAAATTATTTGGAATGGTACCTAATAATCTATTGGAATTAAGTTTCATGGACCTCAACTTCACCAAATTTCCAATCTGCTCAGGAATATATCCAGAGAGGTTATTATCTGAAAGATCCAAGGACTTGAGCTCTGTTAACATATTGATATTGATCGTTCTGCAGGAGCAGGGATCTGAGCTCTTTGAGGGACGCACCACTCCAAGGGATCCTCCCCGTAAGCTTATTGTGTGAGAGATCGACGCTTGTCAGCATCGTCAGTGCAGAGAAGTTGAGGACCTCAAGTGAGCCTCTCAGCCTCATTCCACGCAGAGAAATCTTGGTGATCACAAATTTCCCTTGTCGAGCACCGCACCCAATGCCACGCCAGCTGTGGCATGGCCATGCCTTGCGATCCCAGGACTGCAGGGGTTCCTGGGTTTGCAGGGTGGCCTTCCAGGCGATCAGCGCTCCAGCTTGCTCTTCGATGGATGGCATGGCAATGGCAGGAGGGGCAAGGAGTGAGGACAGTAGTATAGCTAATGGCAGGACCAAATTTAGGGGAGATAAGGGATCCAT
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| CDS seq | ATGGATCCCTTATCTCCCCTAAATTTGGTCCTGCCATTAGCTATACTACTGTCCTCACTCCTTGCCCCTCCTGCCATTGCCATGCCATCCATCGAAGAGCAAGCTGGAGCGCTGATCGCCTGGAAGGCCACCCTGCAAACCCAGGAACCCCTGCAGTCCTGGGATCGCAAGGCATGGCCATGCCACAGCTGGCGTGGCATTGGGTGCGGTGCTCGACAAGGGAAATTTGTGATCACCAAGATTTCTCTGCGTGGAATGAGGCTGAGAGGCTCACTTGAGGTCCTCAACTTCTCTGCACTGACGATGCTGACAAGCGTCGATCTCTCACACAATAAGCTTACGGGGAGGATCCCTTGGAGTGAAGTTGGGAACTTAGCGATCTTAGAAGACTTGAGGCTTGGCATAAACAAACTTTCAAGTTCCATTTCAAACAGTATTGGGAACTTGGCTAAGCTCTCTGTGTTGATTCTTTGGGGCAATCAACTTTCCGGGCACATTCCAAACAACTTAGGGAATTTGACTAAACTCTCGCTCTTGGATCTTTGTCACAACCAACTTTCTGAGCACATTCCTCAAGAACTAGGTTACCTGGTGAACTTAAAGGGCCTAAGGCTTTGTGACAACATGCTCTCAAGTTCCATTCCAAACAACTTAGAGAATTTGACTAAACTCACTGTCTTATCACTTTATAAAAACCAACTTTCTGGACACATTCCTCAAGAACTAGGTTACCTTGTGAACTTAAAGAACTTATCGCTTTATTCAAACAACTTCACAGGTTCCATTCCAAACTGCTTAGGGAATTTGACTAAACTTATTGACTTAGCACTTTTTGAAAACCAATTTTCTAGGCATATTTCTCAAGAACTAGGTAAGCTTGTGAATTTAGAGAATTTAGAACTTTCCAAAAACATGCTCACAGGTTCCATTCCAACCAGCTTAGGGAATTTGACTAAACTCATTGAGTTGTCACTTTTTTGA
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| Protein seq | MDPLSPLNLVLPLAILLSSLLAPPAIAMPSIEEQAGALIAWKATLQTQEPLQSWDRKAWPCHSWRGIGCGARQGKFVITKISLRGMRLRGSLEVLNFSALTMLTSVDLSHNKLTGRIPWSEVGNLAILEDLRLGINKLSSSISNSIGNLAKLSVLILWGNQLSGHIPNNLGNLTKLSLLDLCHNQLSEHIPQELGYLVNLKGLRLCDNMLSSSIPNNLENLTKLTVLSLYKNQLSGHIPQELGYLVNLKNLSLYSNNFTGSIPNCLGNLTKLIDLALFENQFSRHISQELGKLVNLENLELSKNMLTGSIPTSLGNLTKLIELSLF |
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| Function | MDIS1-interacting receptor like kinase 2 [UniProtKB/Swiss-Prot:Q8VZG8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os02g34770 | LOC_Os02g34770.1 | Chr02 | 20849230 | 20851150 | - | MSU_osa1r7 | ||
| CDS seq | ATGGATCCCTTATCTCCCCTAAATTTGGTCCTGCCATTAGCTATACTACTGTCCTCACTCCTTGCCCCTCCTGCCATTGCCATGCCATCCATCGAAGAGCAAGCTGGAGCGCTGATCGCCTGGAAGGCCACCCTGCAAACCCAGGAACCCCTGCAGTCCTGGGATCGCAAGGCATGGCCATGCCACAGCTGGCGTGGCATTGGGTGCGGTGCTCGACAAGGGAAATTTGTGATCACCAAGATTTCTCTGCGTGGAATGAGGCTGAGAGGCTCACTTGAGGTCCTCAACTTCTCTGCACTGACGATGCTGACAAGCGTCGATCTCTCACACAATAAGCTTACGGGGAGGATCCCTTGGAGTGAAGTTGGGAACTTAGCGATCTTAGAAGACTTGAGGCTTGGCATAAACAAACTTTCAAGTTCCATTTCAAACAGTATTGGGAACTTGGCTAAGCTCTCTGTGTTGATTCTTTGGGGCAATCAACTTTCCGGGCACATTCCAAACAACTTAGGGAATTTGACTAAACTCTCGCTCTTGGATCTTTGTCACAACCAACTTTCTGAGCACATTCCTCAAGAACTAGGTTACCTGGTGAACTTAAAGGGCCTAAGGCTTTGTGACAACATGCTCTCAAGTTCCATTCCAAACAACTTAGAGAATTTGACTAAACTCACTGTCTTATCACTTTATAAAAACCAACTTTCTGGACACATTCCTCAAGAACTAGGTTACCTTGTGAACTTAAAGAACTTATCGCTTTATTCAAACAACTTCACAGGTTCCATTCCAAACTGCTTAGGGAATTTGACTAAACTTATTGACTTAGCACTTTTTGAAAACCAATTTTCTAGGCATATTTCTCAAGAACTAGGTAAGCTTGTGAATTTAGAGAATTTAGAACTTTCCAAAAACATGCTCACAGGTTCCATTCCAACCAGCTTAGGGAATTTGACTAAACTCATTGAGTTGTCACTTTTTTGA
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| Protein seq | MDPLSPLNLVLPLAILLSSLLAPPAIAMPSIEEQAGALIAWKATLQTQEPLQSWDRKAWPCHSWRGIGCGARQGKFVITKISLRGMRLRGSLEVLNFSALTMLTSVDLSHNKLTGRIPWSEVGNLAILEDLRLGINKLSSSISNSIGNLAKLSVLILWGNQLSGHIPNNLGNLTKLSLLDLCHNQLSEHIPQELGYLVNLKGLRLCDNMLSSSIPNNLENLTKLTVLSLYKNQLSGHIPQELGYLVNLKNLSLYSNNFTGSIPNCLGNLTKLIDLALFENQFSRHISQELGKLVNLENLELSKNMLTGSIPTSLGNLTKLIELSLF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0635600 | SBH | 0.644365 | 0.616778 | 1.988041 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g34800 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0635600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0020930 | RBH | 0.224015 | 0.0 | 1.065708 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0021010 | RBH | 0.036886 | 0.207486 | 0.122091 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0020990 | SBH | 0.000000 | 0.323324 | 0.581727 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0020740 | SBH | 0.027518 | 0.028389 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0020640 | RBH | 1.418057 | 0.0 | 0.518677 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0344500 | SBH | 0.051288 | 0.072233 | 0.008266 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0020380 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0369700 | RBH | 0.00825 | 0.0766175 | 0.0391675 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0020880 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0020620 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0021060 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0020740 | RBH | 0.000000 | 0.052192 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0020560 | RBH | 0.094109 | 0.146955 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G021020 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0020750 | RBH | 0.0 | 0.0 | 0.0 |
