Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os02g09290 | OGI:02014330 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr02:4785203-4787184 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ACTCACCTCACCACACACCCACAGCCGCCGCCATGGAGCAGGTCTCGTGCTTCGCCGCCGCCGCCGCCGTCGTCGTCGTGGTTCTCTTGCTCGCCCGCATGCTCCTCGCGCCGCGCGGGGAGTGGGACGGGCTGAACCTGCCGCCCAGCCCGCCGCGGCTGCCGTTCATCGGCAGCTTCCACCTCCTCCGCCGCAGCCCGCTCGTCCACCGCGCGCTGGCCGACGTCGCGCGGCAGCTCGGCTCGCCGCCGCTCATGTACATGAGGATCGGCGAGCTCCCGGCCATCGTCGTGTCGTCCGCCGACGCGGCGCGCGAGGTCATGAAGACGCACGACATCAAGTTCGCGTCGCGGCCGTGGCCGCCGACCATCCGGAAGCTGCGCGCGCAGGGGAAGGGCATCTTCTTCGAGCCCTACGGCGCGCTGTGGCGCCAGCTCCGCAAGATCTGCATCGTCAAGCTGCTCAGCGTCCGCCGCGTCAGCTCGTTCCACGGCGTCCGCGAGGAGGAGGCCGGCCGCCTCGTCGCCGCCGTCGCCGCGACGCCGCCGGGACAGGCCGTGAACCTGACCGAGCGGATCGAGGTGGTCATCGCGGACACGACGATGCGCCCCATGATCGGGGAGAGGTTCGAGAGGCGTGAGGACTTCCTCGAGCTCCTCCCGGAGATCGTCAAGATCGCCTCCGGGTTCAGCCTCGACGACCTGTTCCCGTCGTCGTGGCTCGCCTGCGCCATCGGCGGCTCGCAGCGCCGCGGCGAGGCGAGCCACCGGACATCCTACGAGCTGGTGGACAGCGCCTTCCGCCAGCGGCAGCAGCAAAGGGAGGCCATGGCCGCGTCGCCGCCTGACATCGCCAAGGAGGAGGAGGATGATTTGATGGATGAGCTCATCAGGATACACAAGGAAGGTAGCCTCGAGGTGCCTCTTACTGCTGGCAACTTGAAAGCCGTCATCCTAGTAAGTATTTTTCTTACTCCCCTGAATGTTCAGATCAGAATAGAGCTTTTCTACTACTCTGGTTGTTCAGGTAAGATTTTTCTGCTACTCTGATTTTGTTTTTGAAGGAAAAAAACAGTTCAGACAAAAGTTCAGAAGAGTATATATATATATATATATGTTCTTGCAGATAGTGTTCAATTAACTTGATGTAGCATATGTATTTTCCTTAGTTGTTTATCTGGTTAAAGTTTCACATGTGTTGCATTTTGGCATTGTACAGGATCTCTTTGGTGCTGGAAGCGAGACATCCTCGGATGCGCTCCAATGGGCAATGTCAGAGCTGATGAGAAACCCAAGAGTGATGGAGAAAGCACAAAACGAGGTTCAAAGCATCCTCAAAGGGAAGCCATCGGTGACCGAAGCCGACGTAGCCAACCTAAAGTATCTGAAAATGATTGTCAAGGAGACTCATAGGCTACACCCGGTGTTGCCGTTGCTCATCCCAAGGGAGTGCCAGCAAACTTGCCAGATCATGGGGTATGATGTGCCCCAAGGTAGTGTCATATTTATAAACTCGTGGGCGATAATGAGGGACCCCAAGCATTGGGATGATGCCGAGACTTTCAAACCGGAGCGGTTTGAGGATGGTGAGATCGACCTCAAGGGTACAAACTATGAGTTCACACCATTTGGGGCTGGACGTAGGATCTGCCCTGGCTTGGCATTAGCCCAGGCCAGCATAGAGTTCATGCTCGCCACTCTGCTCTACCACTTCGACTGGGAGCTCCCTAACAGGGCTGCACCGGAGGAGCTGGACATGACTGAGGAGATGGGCATCACCATCCGAAGGAAGAAGGATCTCTACTTGCTCCCAACTCTCCGTGTGCCTCTTACCGCATAGCACCTTCCGTCCTTGATGTGTGCAATCAGTATGTGTGCTTGTGATGCCTCTACATGAGGTCGCACAAGTTGTACCTCGCTGCTCGTTTCGGCTTTAATAAACCGACAGAAATCTCCTTATTCTATGTTTGGCTTTCTTAATAA
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| CDS seq | ATGGAGCAGGTCTCGTGCTTCGCCGCCGCCGCCGCCGTCGTCGTCGTGGTTCTCTTGCTCGCCCGCATGCTCCTCGCGCCGCGCGGGGAGTGGGACGGGCTGAACCTGCCGCCCAGCCCGCCGCGGCTGCCGTTCATCGGCAGCTTCCACCTCCTCCGCCGCAGCCCGCTCGTCCACCGCGCGCTGGCCGACGTCGCGCGGCAGCTCGGCTCGCCGCCGCTCATGTACATGAGGATCGGCGAGCTCCCGGCCATCGTCGTGTCGTCCGCCGACGCGGCGCGCGAGGTCATGAAGACGCACGACATCAAGTTCGCGTCGCGGCCGTGGCCGCCGACCATCCGGAAGCTGCGCGCGCAGGGGAAGGGCATCTTCTTCGAGCCCTACGGCGCGCTGTGGCGCCAGCTCCGCAAGATCTGCATCGTCAAGCTGCTCAGCGTCCGCCGCGTCAGCTCGTTCCACGGCGTCCGCGAGGAGGAGGCCGGCCGCCTCGTCGCCGCCGTCGCCGCGACGCCGCCGGGACAGGCCGTGAACCTGACCGAGCGGATCGAGGTGGTCATCGCGGACACGACGATGCGCCCCATGATCGGGGAGAGGTTCGAGAGGCGTGAGGACTTCCTCGAGCTCCTCCCGGAGATCGTCAAGATCGCCTCCGGGTTCAGCCTCGACGACCTGTTCCCGTCGTCGTGGCTCGCCTGCGCCATCGGCGGCTCGCAGCGCCGCGGCGAGGCGAGCCACCGGACATCCTACGAGCTGGTGGACAGCGCCTTCCGCCAGCGGCAGCAGCAAAGGGAGGCCATGGCCGCGTCGCCGCCTGACATCGCCAAGGAGGAGGAGGATGATTTGATGGATGAGCTCATCAGGATACACAAGGAAGGTAGCCTCGAGGTGCCTCTTACTGCTGGCAACTTGAAAGCCGTCATCCTAGATCTCTTTGGTGCTGGAAGCGAGACATCCTCGGATGCGCTCCAATGGGCAATGTCAGAGCTGATGAGAAACCCAAGAGTGATGGAGAAAGCACAAAACGAGGTTCAAAGCATCCTCAAAGGGAAGCCATCGGTGACCGAAGCCGACGTAGCCAACCTAAAGTATCTGAAAATGATTGTCAAGGAGACTCATAGGCTACACCCGGTGTTGCCGTTGCTCATCCCAAGGGAGTGCCAGCAAACTTGCCAGATCATGGGGTATGATGTGCCCCAAGGTAGTGTCATATTTATAAACTCGTGGGCGATAATGAGGGACCCCAAGCATTGGGATGATGCCGAGACTTTCAAACCGGAGCGGTTTGAGGATGGTGAGATCGACCTCAAGGGTACAAACTATGAGTTCACACCATTTGGGGCTGGACGTAGGATCTGCCCTGGCTTGGCATTAGCCCAGGCCAGCATAGAGTTCATGCTCGCCACTCTGCTCTACCACTTCGACTGGGAGCTCCCTAACAGGGCTGCACCGGAGGAGCTGGACATGACTGAGGAGATGGGCATCACCATCCGAAGGAAGAAGGATCTCTACTTGCTCCCAACTCTCCGTGTGCCTCTTACCGCATAG
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| Protein seq | MEQVSCFAAAAAVVVVVLLLARMLLAPRGEWDGLNLPPSPPRLPFIGSFHLLRRSPLVHRALADVARQLGSPPLMYMRIGELPAIVVSSADAAREVMKTHDIKFASRPWPPTIRKLRAQGKGIFFEPYGALWRQLRKICIVKLLSVRRVSSFHGVREEEAGRLVAAVAATPPGQAVNLTERIEVVIADTTMRPMIGERFERREDFLELLPEIVKIASGFSLDDLFPSSWLACAIGGSQRRGEASHRTSYELVDSAFRQRQQQREAMAASPPDIAKEEEDDLMDELIRIHKEGSLEVPLTAGNLKAVILDLFGAGSETSSDALQWAMSELMRNPRVMEKAQNEVQSILKGKPSVTEADVANLKYLKMIVKETHRLHPVLPLLIPRECQQTCQIMGYDVPQGSVIFINSWAIMRDPKHWDDAETFKPERFEDGEIDLKGTNYEFTPFGAGRRICPGLALAQASIEFMLATLLYHFDWELPNRAAPEELDMTEEMGITIRRKKDLYLLPTLRVPLTA |
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| Function | Cytochrome P450 71D7 [UniProtKB/Swiss-Prot:P93531] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os02g09290 | LOC_Os02g09290.1 | Chr02 | 4785203 | 4787184 | + | MSU_osa1r7 | ||
| CDS seq | ATGGAGCAGGTCTCGTGCTTCGCCGCCGCCGCCGCCGTCGTCGTCGTGGTTCTCTTGCTCGCCCGCATGCTCCTCGCGCCGCGCGGGGAGTGGGACGGGCTGAACCTGCCGCCCAGCCCGCCGCGGCTGCCGTTCATCGGCAGCTTCCACCTCCTCCGCCGCAGCCCGCTCGTCCACCGCGCGCTGGCCGACGTCGCGCGGCAGCTCGGCTCGCCGCCGCTCATGTACATGAGGATCGGCGAGCTCCCGGCCATCGTCGTGTCGTCCGCCGACGCGGCGCGCGAGGTCATGAAGACGCACGACATCAAGTTCGCGTCGCGGCCGTGGCCGCCGACCATCCGGAAGCTGCGCGCGCAGGGGAAGGGCATCTTCTTCGAGCCCTACGGCGCGCTGTGGCGCCAGCTCCGCAAGATCTGCATCGTCAAGCTGCTCAGCGTCCGCCGCGTCAGCTCGTTCCACGGCGTCCGCGAGGAGGAGGCCGGCCGCCTCGTCGCCGCCGTCGCCGCGACGCCGCCGGGACAGGCCGTGAACCTGACCGAGCGGATCGAGGTGGTCATCGCGGACACGACGATGCGCCCCATGATCGGGGAGAGGTTCGAGAGGCGTGAGGACTTCCTCGAGCTCCTCCCGGAGATCGTCAAGATCGCCTCCGGGTTCAGCCTCGACGACCTGTTCCCGTCGTCGTGGCTCGCCTGCGCCATCGGCGGCTCGCAGCGCCGCGGCGAGGCGAGCCACCGGACATCCTACGAGCTGGTGGACAGCGCCTTCCGCCAGCGGCAGCAGCAAAGGGAGGCCATGGCCGCGTCGCCGCCTGACATCGCCAAGGAGGAGGAGGATGATTTGATGGATGAGCTCATCAGGATACACAAGGAAGGTAGCCTCGAGGTGCCTCTTACTGCTGGCAACTTGAAAGCCGTCATCCTAGATCTCTTTGGTGCTGGAAGCGAGACATCCTCGGATGCGCTCCAATGGGCAATGTCAGAGCTGATGAGAAACCCAAGAGTGATGGAGAAAGCACAAAACGAGGTTCAAAGCATCCTCAAAGGGAAGCCATCGGTGACCGAAGCCGACGTAGCCAACCTAAAGTATCTGAAAATGATTGTCAAGGAGACTCATAGGCTACACCCGGTGTTGCCGTTGCTCATCCCAAGGGAGTGCCAGCAAACTTGCCAGATCATGGGGTATGATGTGCCCCAAGGTAGTGTCATATTTATAAACTCGTGGGCGATAATGAGGGACCCCAAGCATTGGGATGATGCCGAGACTTTCAAACCGGAGCGGTTTGAGGATGGTGAGATCGACCTCAAGGGTACAAACTATGAGTTCACACCATTTGGGGCTGGACGTAGGATCTGCCCTGGCTTGGCATTAGCCCAGGCCAGCATAGAGTTCATGCTCGCCACTCTGCTCTACCACTTCGACTGGGAGCTCCCTAACAGGGCTGCACCGGAGGAGCTGGACATGACTGAGGAGATGGGCATCACCATCCGAAGGAAGAAGGATCTCTACTTGCTCCCAACTCTCCGTGTGCCTCTTACCGCATAG
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| Protein seq | MEQVSCFAAAAAVVVVVLLLARMLLAPRGEWDGLNLPPSPPRLPFIGSFHLLRRSPLVHRALADVARQLGSPPLMYMRIGELPAIVVSSADAAREVMKTHDIKFASRPWPPTIRKLRAQGKGIFFEPYGALWRQLRKICIVKLLSVRRVSSFHGVREEEAGRLVAAVAATPPGQAVNLTERIEVVIADTTMRPMIGERFERREDFLELLPEIVKIASGFSLDDLFPSSWLACAIGGSQRRGEASHRTSYELVDSAFRQRQQQREAMAASPPDIAKEEEDDLMDELIRIHKEGSLEVPLTAGNLKAVILDLFGAGSETSSDALQWAMSELMRNPRVMEKAQNEVQSILKGKPSVTEADVANLKYLKMIVKETHRLHPVLPLLIPRECQQTCQIMGYDVPQGSVIFINSWAIMRDPKHWDDAETFKPERFEDGEIDLKGTNYEFTPFGAGRRICPGLALAQASIEFMLATLLYHFDWELPNRAAPEELDMTEEMGITIRRKKDLYLLPTLRVPLTA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.267918 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0185900 | RBH | 0.0 | 0.0 | 1.134442 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g43440 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0185900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0006500 | SBH | 0.048737 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0006650 | SBH | 0.000000 | 0.247685 | 1.030326 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0006430 | SBH | 0.0 | 0.000000 | 0.672735 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0006390 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0006420 | SBH | 1.352356 | 4.581595 | 5.586592 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0081400 | SBH | 1.12522 | 11.593083 | 0.532187 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0006380 | SBH | 0.414991 | 0.050392 | 0.249546 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0083900 | SBH | 3.087572 | 0.039551 | 0.0122025 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0006790 | SBH | 0.050209 | 1.296661 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0006350 | SBH | 0.327971 | 15.745680 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0006680 | SBH | 3.315184 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0006670 | SBH | 0.388017 | 0.148740 | 0.122075 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0006400 | SBH | 0.115466 | 0.420202 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G006530 | SBH | 0.038728 | 0.338339 | 0.781826 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0006500 | SBH | 0.000000 | 1.786373 | 6.333513 |
