Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsLima_02g0006790 | OGI:02014330 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr02:4892704-4930171 | ||||||||
Gene Symbol | CYP71D8L, OsCYP71D8L, OsEnS-27, OsEnS-28 | ||||||||||
DNA seq | atggccatggtgcaagacatcaccggctacctgtgcctctccttggctctcctcttgctcactctcgtcctccacaaggtggcgaggaaggcgaccggtaatggcgccggcaagccgaggcttccgccggggccgtggcggctgccggtcatcggcaacctccaccaggtcgcgatgggcggcccgctcgtccaccgcaccatggccgacctggcgcgccggctggacgcgccgctcatgtcgctcaggctcggcgagctccgcgtcgtcgtcgcctcatccgccaacgccgccagggagatcaccaagacgcacgacgtcgcgttcgcgacgcggccgtggagctccaccatccgcgtcctgatgagcgacggcgttgggctggtgttcgcgccctacggcgcgctgtggcggcagctccgcaagatcgccgtggtggagctcctcagcgcgcgccgcgtccagtcgttccgccgcatccgggaggacgaggtcggccgcctcgtcgccgccgtcgccgccgccccggcggcgcagcccgtgaacgtcagcgagcggatcgcggcgctcatctccgactcggcggtgcgcaccatcatcggcgaccggttcgagaggcgggacgagttcctggagggtctcgccgaggcgatcaagatcacctccgggttcagcctcggcgacctgttcccgtcgtcgaggctggccagcttcgtcggcggcacgacgcggcgggcggaggcgaaccaccgcaagaacttcgagctgatagagtgcgctctgaggcagcacgaggagcggagggccgccggcgccgtggacgacgacgaggacctcgtcgatgtgcttctcagggttcagaaggatgggagcctccagatgcctctcaccatgggcaatatcaaagccgtcgtcctggtaagtagacaagtacttgctgattaatactgtactaatctcccttaattgcacacgaatacttctgagcttagagtagtatttatcttaccaataattaatttttcaatcgtatctacaatcgtaccctaacgtacgttctcttccctaatttagtgaaggttcaatcacactttctggatctataatccattatattcgtgaaaggatgaaatataagacatattttaccaaacctcttttacctgagtgcacttaaaatttgactactgttaatgtcaaaatctacaaagttttaccgtttaagaataaaattaaataactttaactgatgaatggagcgagtatatatgaaaataaaaaaaaagtatgcacactgaacaaaggaaggaagtaattgataacatatttttttacatatatgggaaatcatgttttttttcatgcatataggaactttttggtgctgggagcgagacatcagctaatacacttcaatgggcgatgactgagctcataatgaatccaagagtgatgctgaaggcacaagctgagttaagtaacgtcatcaaaggaaagcaaacgatatctgaagatgacttagttgaattgaagtacttaaaacttattatcaaagagaccttaaggttacatcctgtagtgccactacttctccctagggaatgtcgggagacatgtgaggtcatgggttacgatatcctcataggtactattgtgcttgttaacgtatgggcaataggtagagatcctaagtattgggaggatgctgagacattcatacctgaacgatttgaggatggccatatagacttcaaaggaacaaactttgaatttataccgtttggagctggacgaaggatgtgccctggcatggtatttgcagaagtaatcatggagctcgctctagcctcattgctttaccactttgattgggagctccctgatggcatctcgccaaccaaggtggacatgatggaggagttgggtgctacaattcgaagaaagaacgatctttaccttattcctgctgtccgtgtgcctttgtcaactgtcttatagttgtttacacttacaaatagtatgtttgtctcgtataaatagtatgtttgtctcgtatgtacgtgtctaaatgataagctatgtaacttttgatgatgtgtactcctacttcctatcctacctattataaattattatttaagtttaattctcaaattattcaatttatttttataatcaagtagaaaactcatgacaataattccatgaataatctgcttttcaattttgatcgatgactgtcacctcattacacatatatgtacttgcatgcacaatatctggtgtagactctgcgacgccataaccatgaacaatacgtaggagggaggataatagtcgtgcctcctattgctgacagtgactctgctaacacaatgacgttgtgtgaagagaagaggagaagaggcgtgctggtctgctggagcctggaagtaggaagggaaaaggagggggatggaaagaggagaaaggaggctcacgattcagcgaattataaacttataatggaattgatttgatcagttttaagaaattttcgaaacgtggaattcggaattcttgctctggtcgatgttgtagtgtgcttgactcagttctgaaccatgccagttagcagttttaactccccagaacttctcgtttcaaacataattaatcaacggaatctgaagtctttttagaagataaatttgcaaaagtccaatatttcaaaccctttttctccttcacgtggaattcaaaagcacatggaagttgcgaagtggaatcagtcgatccgaattcaaattctagacttgatatgttcacatttacgactaattcatctttcagtgtataatatactcgtcgatagtgtgacatcaatgacgacttcatcaatctaaaggtatattccgttttagattataagatgttttgattttggtcaaaatcaaactgtttaaagtttgaccaagtttatagaaaaaatagaaatattttcaactcaagatttaatattgtaatatttacattaccaaattagttttattaaattaataattaaatatatttttataataaatttatttttagttaaaaatatttctgtttttctataaatttagtgaaatttgaagttataacctaaaacagggagtaccggtaagtattttgaaggtgcttataaaataaaaataaagtacgcgcgtgcatttatactaacgagtgtgcgagtacatggatttgtatttttgtcttttaaaaataagcacgtggaagctagacgcagtgctggtctctctccgactctccccacgtgggccaggccccacctgtgtcggtgtgttactagctagtgattgattcgatgaaaagcggtgatcaataaatacttatattgtctttgagattagtcggcaaagaagtgtctgcaaatcttgcagtttaagaacggacagcattacatcatcatctgaacattattgttgcgcttgcactaaatcatacagttaaagtgtaccacctcttttttttttataattgacgtgttttgaacgtatgacacatgcatgctctataaaaagaacatgagaggtcctatttaaagttagtattcgatcttttcattctcaaaacaccctcttgatccgcttgaaaattcttttgaaaaagagttcttccacgccttagaaaaaaaaagcttgttcggttaattcttatgtgaaggccggaaggaatgttggagattaagtaatcctctctaaatccttcttaactttttatgaaggaattaatcgagaagggcattaattttatatatctatatggttcattctcactaagtgcaactagtgctaattttctcttttcacagcttgccacatcacttcaaattaatctagccattagatctaaaattgatgtccaagatgtttactttctagcgtgcagcaagaatgtctttttaagtccaaattttcttgggccatgtcactctaccggttcctgcatgtttacatgcatgccaagccattctacctttattattagccataccattattattggcccactatctttcggtggactgctcatcttctagaaactgcccagccatacaaccagtcaaccaagctataaattaagcagtggcatagcataggattagccacattcattgatcattcaagatttcagacaattgtgagaaatttcatctcacatctattgtcgagactcaatgtcagttctccggtttcatacacccaagcaatttaagattgtcaagattttatcatgaaattccgggctgttcatattgatgctattttcaaccatattattttttttagcaacgttatcaaaaaaaaagtgtctacgtttagcttattgccaaactttggcaagttgataatattgctaaaattttggtaaggtttattttagctacaatctaaatatgtccttcatacacccaagcaattcgagactcatgaaatttctcacaatcgtttgtaacattcaagatttcaaacacccaagcaatttatctcacatcgattgtcaaggctcatggcagttctccaattttatctcacatcgattgtcaggctcatggcagttccccggttttatcctcaatcagtttggttctatatgacaatcggtcatctcttctcctaatctcctggagctgatctaatcatgggtgttatctaatctttccatcatgagacaggtattttgtttttcatcgccatagctttgttttggtatctaatggtgcattaaaatatttacattatatcatcctctgttttttaagcttgcttatcagcttagttattaaataatatttgtactagtgctaagtaaatcttttatcttaacatttattgacggacaatcgctaacatggaagtactaccttagtatagtccaacataacggcagaaaaaaggaagcatggttcactgcttcacccttttcactctgtattgaagattcttcttttagaa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CDS seq | atggctgagctcataatgaatccaagaacaatgctgaaggcacaagcagagttacgtgatgccctccaaggaaagcaaatagtgtcagaatatgacttggttaaattgaagtatttgaaacttattatcaaggagaccttaaggttacatcctgtggtgccactacttctccctagggaatgtcaagagacatgtaaggtcatggactacgatatccccataggtactattgtgcttgtgaacgtgtgggtaatcggtagagaccctaagtattgggatgacgccaagacatttagactcgagcgatttgaggatggccatgtagattttaaaggaatgaactttgaatatttaccttttggagcagggcgaaggatgtgccctggtgtggcatttgcagaaccaattatggagctcgctctagcctcattgctctatcactttgattgggagttccccgatggcatctcgccggtcaagatggatatgatggaggtgatgggttctaccaaggtggcgtggtgcgcttgcttcctcttcctggctcttatggtggttaggttgaggacgaagcggcgtggcgacaataatggcggggtgaagttgccgcctgggccgtggcgactgccgctcgtcggcaacctccaccaggtcatggcgcgcggcccgctcgtgcaccgcaccatggccgacctggcgcgccggctcgacgcgccgctcatgtcgctcaggctcggcgaggtccccgtcgtcgtcgcctcgtccgccgacgccgccagggagatcaccaagacgcacgacgtcgcgttcgcgacacggccgtggagcccgaccacgcggcggctgcggtgcgacggcgagggcgtggtgttcgcgacgtacggcgcgctgtggcgccagctccgcaagctgtgcgtcgtcgagctgctcggcgcgcggcgcgtccggtcgttccgccgcgtccgcgaggaggaggcgcgccgcctcgtcgccgccgtcgccgcgtccccgcgcggcgaggccgtgaacgtcagcgagcggatcacggcggtgatcacggacgcgacgatgcgggccatgatcggggacaggttcgggcggcgcgacgagttcctggagctgctcgccgacatcgtcaagatcggctccgggttcagcctcgacgacctgttcccgtcgtggcgtctcgccggcgccatcggcggcatggcgcgccgcgccgaggcgaaccaccggaggacctacgagctgatggacagcgtgttccagcagcacgaacagcggagggttcacgttgctgcgccggctgacggcgccatggacgacgcggaggaggacctcgttgacgtgctcttcaggatacagaaagatggtggcctcgaggtgcctctcaccattggcaacatcaaagcaatcatcctggacctcttcaatgcagggagtgagacatcagcaaatacgctccagtgggttatgtcagagctaatgaggaacccaaaagtgatgagaaaagcacaagcagagttaaggaacaacctacaagggaagacaacggtaaccgaagacgatctcacaaatctaaagtacctgaagcttgtcatcaaggagacgcttaggttacatcccgtgctgcccttacttctcccaagagagtgccaagaagcatgcaatgtcatcgggtacgacgtccccaaatacactaccgtttttataaacgtgtgggcaatcaacagggaccccaaatattgggacatggccgagatgtttaagccagaacgctttgacaatagcatgattgacttcaaaggtacagacttcgagttcgtgccatttggggctggaagaaggatctgtcctggcatagcatttgcacagtccaatatggagcttgtgcttgctacactcctataccactttgactgggagcttcctagtggtatgtcgcctgaagagttagatatgactgaggacatgggactatctgtccgaaggaagaatgatctttacctacatccaacagtctcgtgcttcgccgccgccgccgccgccgccgtcgtcgtcgtggttctcttgctcgcccgcatgctcctcgcgccgcgcggggagtgggacgggctgaacctgccgcccagcccgccgcggctgccgttcatcggcagcttccacctcctccgccgcagcccgctcgtccaccgcgcgctggccgacgtcgcgcggcagctcggctcgccgccgctcatgtacatgaggatcggcgagctcccggccatcgtcgtgtcgtccgccgacgcggcgcgcgaggtcatgaagacgcacgacatcaagttcgcgtcgcggccgtggccgccgacaatccggaagctgcgcgcgcaggggaagggcatcttcttcgcgccctacggcgcgctgtggcgccagctccgcaagatctgcatcgtcaagctgctcagcgtccgccgcgtcagctcgttccacggcgtccgcgaggaggaggccggccgcctagtcgccgccgtcgccgcgacgccgccgggacaggccgtgaacctgaccgagcggatcgaggtggtcatcgcggacacgacgatgcgccccatgatcggggagaggttcgagaggcgtgaggacttcctcgagctcctcccggaaatcgtcaagatcgcctccgggttcagcctcgacgacctgttcccgtcgtcgtggctcgcctgcgccatcggcggctcgcagcgccgcggcgaggcgagccaccggacatcctacgagctggtggacagcgccttccgccagcggcagcagcaaagggaggccatggccgcgtcgccgcctgacatcgccaaggaggaggaggatgatttgatggatgatctcatcaggatacacaaggaaggtagcctcgaggtgcctcttactgctggcaacttgaaagccgtcatcctagatctctttggtgctggaagcgagacatcctcggatgcgctccaatgggcaatgtcagagctgatgagaaacccaagagtgatggagaaagcacaaaacgaggttcaaagcatcctcaaagggaagccatcggtgaccgaagccgacgtagccaacctaaagtatctgaaaatgattgtcaaggagactcataggctacacccggtgttaccgttgctcatcccaagggagtgccagcaaacttgccagatcatggggtatgatgtgccccaaggtagtgtcatatttataaactcgtgggcgataatgagggaccccaagcattgggatgatgccgagactttcaaaccagagcggtttgaggatggtgagatcgacctcaagggtacaaactatgagttcacaccatttggggctggacgtaggatctgccctggcttggcattagcccaggccagcatagagttcatgctcgccactctgctctaccacttcgactgggagctccctaacggggctgcaccggaggagctggacatgactgaggagatgggcatcaccatccgaaggaagaaggatctctacttgctcccaactctccgtccaccacccgccgccatggagcaggtctcgtgcttcgccgccgccgccgccttcgtcctcgttgttctctcgctcgctcgcatgctcctcgcgccgcgcagggagtgggacgggctgaacctgccgcccagcccgtcgcggctgccgttcatcggcagcttccacctcctccgccgcagcccgctcgtccaccgcgcgctggccgacgtcgtgcggcagctcggcgcgccgccgctcatgtacatggagatcggtgaggtcccggccatcgtcgtgtcgtgcgccgacgcggcgcgcgagatcatgaagacgcacgacatcaacttctcgtcgcggccgtggccgccgaccgtccagaagctgcgcgcgcaggggaagggcatcttcttcgagccctacggcgcgctgtggcgccagctccgcaagatctgcatcgtcaagctgctcagcgtccgccgcgtcagctcgttccacggcgtccgcgaggaggaggccggccgcctcgtcgccgccgtcgccgcgacgccgccgggacaggccgtgaacctcaccgagcggatcaaggtggccatcgcggacaccacgatgcgccccatgatcggtgagaggttcgagaggcgggaggacttcctcgaggtcctcccggagatcgtcaagctcgcctccgggttcagcctcgacgacctgttcccgtcgtcgtggctcgccggcgccatcggcggctcgcggcgccgcggcgaggcggtcaaccgggcgtcctacgagctggtggacagcgccttccgccagcggcagcagcaaaaggaggccatggctgcgccgccgcctgacatcgccaaggaggaggaggatgacttgatggatgagctcatcaggatacacaaggaaggtagcctcgaggtgcctcttactgccggcaacttgaaagctgtcatcctagagctcttttgtgcgggaagtgagacatcctcgaatgcgatccaatgggcaatgtcagagctggtgaggaacccaagagtgatggagaaagcacagaacgaggtgcgaagcatcctcaaagggaagcccacagtgactgaggccgacatggtagacctaacgtatgtgaagatgattgtcaaggagactcataggctgcatccggtattgccattgctcaccccaagggtgtgctag
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Protein seq | MAELIMNPRTMLKAQAELRDALQGKQIVSEYDLVKLKYLKLIIKETLRLHPVVPLLLPRECQETCKVMDYDIPIGTIVLVNVWVIGRDPKYWDDAKTFRLERFEDGHVDFKGMNFEYLPFGAGRRMCPGVAFAEPIMELALASLLYHFDWEFPDGISPVKMDMMEVMGSTKVAWCACFLFLALMVVRLRTKRRGDNNGGVKLPPGPWRLPLVGNLHQVMARGPLVHRTMADLARRLDAPLMSLRLGEVPVVVASSADAAREITKTHDVAFATRPWSPTTRRLRCDGEGVVFATYGALWRQLRKLCVVELLGARRVRSFRRVREEEARRLVAAVAASPRGEAVNVSERITAVITDATMRAMIGDRFGRRDEFLELLADIVKIGSGFSLDDLFPSWRLAGAIGGMARRAEANHRRTYELMDSVFQQHEQRRVHVAAPADGAMDDAEEDLVDVLFRIQKDGGLEVPLTIGNIKAIILDLFNAGSETSANTLQWVMSELMRNPKVMRKAQAELRNNLQGKTTVTEDDLTNLKYLKLVIKETLRLHPVLPLLLPRECQEACNVIGYDVPKYTTVFINVWAINRDPKYWDMAEMFKPERFDNSMIDFKGTDFEFVPFGAGRRICPGIAFAQSNMELVLATLLYHFDWELPSGMSPEELDMTEDMGLSVRRKNDLYLHPTVSCFAAAAAAAVVVVVLLLARMLLAPRGEWDGLNLPPSPPRLPFIGSFHLLRRSPLVHRALADVARQLGSPPLMYMRIGELPAIVVSSADAAREVMKTHDIKFASRPWPPTIRKLRAQGKGIFFAPYGALWRQLRKICIVKLLSVRRVSSFHGVREEEAGRLVAAVAATPPGQAVNLTERIEVVIADTTMRPMIGERFERREDFLELLPEIVKIASGFSLDDLFPSSWLACAIGGSQRRGEASHRTSYELVDSAFRQRQQQREAMAASPPDIAKEEEDDLMDDLIRIHKEGSLEVPLTAGNLKAVILDLFGAGSETSSDALQWAMSELMRNPRVMEKAQNEVQSILKGKPSVTEADVANLKYLKMIVKETHRLHPVLPLLIPRECQQTCQIMGYDVPQGSVIFINSWAIMRDPKHWDDAETFKPERFEDGEIDLKGTNYEFTPFGAGRRICPGLALAQASIEFMLATLLYHFDWELPNGAAPEELDMTEEMGITIRRKKDLYLLPTLRPPPAAMEQVSCFAAAAAFVLVVLSLARMLLAPRREWDGLNLPPSPSRLPFIGSFHLLRRSPLVHRALADVVRQLGAPPLMYMEIGEVPAIVVSCADAAREIMKTHDINFSSRPWPPTVQKLRAQGKGIFFEPYGALWRQLRKICIVKLLSVRRVSSFHGVREEEAGRLVAAVAATPPGQAVNLTERIKVAIADTTMRPMIGERFERREDFLEVLPEIVKLASGFSLDDLFPSSWLAGAIGGSRRRGEAVNRASYELVDSAFRQRQQQKEAMAAPPPDIAKEEEDDLMDELIRIHKEGSLEVPLTAGNLKAVILELFCAGSETSSNAIQWAMSELVRNPRVMEKAQNEVRSILKGKPTVTEADMVDLTYVKMIVKETHRLHPVLPLLTPRVC |
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Function | Premnaspirodiene oxygenase [UniProtKB/Swiss-Prot:A6YIH8] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLima_02g0006790 | OsLima_02g0006790.01 | Chr02 | 4892704 | 4905761 | + | NAM | ||
CDS seq | atggccatggtgcaagacatcaccggctacctgtgcctctccttggctctcctcttgctcactctcgtcctccacaaggtggcgaggaaggcgaccggtaatggcgccggcaagccgaggcttccgccggggccgtggcggctgccggtcatcggcaacctccaccaggtcgcgatgggcggcccgctcgtccaccgcaccatggccgacctggcgcgccggctggacgcgccgctcatgtcgctcaggctcggcgagctccgcgtcgtcgtcgcctcatccgccaacgccgccagggagatcaccaagacgcacgacgtcgcgttcgcgacgcggccgtggagctccaccatccgcgtcctgatgagcgacggcgttgggctggtgttcgcgccctacggcgcgctgtggcggcagctccgcaagatcgccgtggtggagctcctcagcgcgcgccgcgtccagtcgttccgccgcatccgggaggacgaggtcggccgcctcgtcgccgccgtcgccgccgccccggcggcgcagcccgtgaacgtcagcgagcggatcgcggcgctcatctccgactcggcggtgcgcaccatcatcggcgaccggttcgagaggcgggacgagttcctggagggtctcgccgaggcgatcaagatcacctccgggttcagcctcggcgacctgttcccgtcgtcgaggctggccagcttcgtcggcggcacgacgcggcgggcggaggcgaaccaccgcaagaacttcgagctgatagagtgcgctctgaggcagcacgaggagcggagggccgccggcgccgtggacgacgacgaggacctcgtcgatgtgcttctcagggttcagaaggatgggagcctccagatgcctctcaccatgggcaatatcaaagccgtcgtcctggaactttttggtgctgggagcgagacatcagctaatacacttcaatgggcgatgactgagctcataatgaatccaagagtgatgctgaaggcacaagctgagttaagtaacgtcatcaaaggaaagcaaacgatatctgaagatgacttagttgaattgaagtacttaaaacttattatcaaagagaccttaaggttacatcctgtagtgccactacttctccctagggaatgtcgggagacatgtgaggtcatgggttacgatatcctcataggtactattgtgcttgttaacgtatgggcaataggtagagatcctaagtattgggaggatgctgagacattcatacctgaacgatttgaggatggccatatagacttcaaaggaacaaactttgaatttataccgtttggagctggacgaaggatgtgccctggcatggtatttgcagaagtaatcatggagctcgctctagcctcattgctttaccactttgattgggagctccctgatggcatctcgccaaccaaggtggacatgatggaggagttgggtgctacaattcgaagaaagaacgatctttaccttattcctgctgtccgtctgcacctgcacatcgccatggccatggccgacctggagttggagaaggttgcgagcttcttgctggcggcgctgctgccgctcgtgctcttcaagctggcggcggcgaagcgcggtggtggcgatggcggcatgaggctgccgcctgggccgtggcggctgccggtgatcggcaacctgcaccagatcatggcgggtggccagctcgtgcaccgcaccatggccggcctggcgcgggggctcggcgacgcgccgctgctgtcgctcaggctcggcgaggtccccgtcgtcgtggcctcgtcggccgacgccgcgagggagatcatgagcaggcacgacgccaagttcgccacgcggccgtggagccccaccgtgcgggtccagatggtcgacggcgagggcctcgcgttcgcgccctacggcgcgctgtggcggcagctgcgcaagatcaccatggtggagctgctcagcccgcgccgcgtcaggtcgttccgccgcgtgcgggaggaggaggtcggccgcctcgtcgtcgccgtcgccacggcggcgacgcggcggcccggcgaggccgccgtgaacgtcggcgagcggctcaccgtgctgatcaccgacatcgcggtgcgcacgatcatcggcgaccggttcgagcggcgggaggatttcctcgacgccgccgccgagtgggtcaagatcatgtccgggttcagcctcggcgacctgttcccgtcgtcgaggctggccagcttcgtcagcggcacggtgcgccgggcggaggcgaaccaccgcaagaacttcgagctgatggattacgctctcaagcagcatgaggagaagagggcagctgctgcagctgccggcgccggcgccgtggaagacgatgaggacatcgtcgacgtgcttctcaggattcagaaggaagggggcctcgaagtgcccctcaccatgggcgtcatcaaaggcgtcattcgtgacctttttggtgccgggagtgagacatcagctaatacactccaatggactatgtccgagctcgtgaggaacccaagagtgatgcaaaaggcacaaactgagctacgtgattgtcttcgaggaaagcaatcggtgtcagaagatgatttgatcggattgaaatacttgaagcttgtcatcaaggaaaccctaaggctgcatcctgtagtgccactgcttcttccgagagaatgtcaagagacatgtaacattatggggtacgacatgctcaagggcacaaacgtgctcgtgaacgtctgggcaatatgcagagatcctaggcattgggaaaatgctgagacattcataccagagcgatttgaggatagcaccgtagactttaaaggcacagactttgagttcataccatttggagcaggacgaaggatgtgccctggtttggcatttgcgcaggttagcatggagcttgctctagcctcattgctatatcatttcgactgggaactccctagtggtgttgcgccaagcaatctagacatggaagaggagatgggtatcaccatccgaaggaagaatgatctttacctggttccaaaggtccgtgtgcctctatag
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Protein seq | MAMVQDITGYLCLSLALLLLTLVLHKVARKATGNGAGKPRLPPGPWRLPVIGNLHQVAMGGPLVHRTMADLARRLDAPLMSLRLGELRVVVASSANAAREITKTHDVAFATRPWSSTIRVLMSDGVGLVFAPYGALWRQLRKIAVVELLSARRVQSFRRIREDEVGRLVAAVAAAPAAQPVNVSERIAALISDSAVRTIIGDRFERRDEFLEGLAEAIKITSGFSLGDLFPSSRLASFVGGTTRRAEANHRKNFELIECALRQHEERRAAGAVDDDEDLVDVLLRVQKDGSLQMPLTMGNIKAVVLELFGAGSETSANTLQWAMTELIMNPRVMLKAQAELSNVIKGKQTISEDDLVELKYLKLIIKETLRLHPVVPLLLPRECRETCEVMGYDILIGTIVLVNVWAIGRDPKYWEDAETFIPERFEDGHIDFKGTNFEFIPFGAGRRMCPGMVFAEVIMELALASLLYHFDWELPDGISPTKVDMMEELGATIRRKNDLYLIPAVRLHLHIAMAMADLELEKVASFLLAALLPLVLFKLAAAKRGGGDGGMRLPPGPWRLPVIGNLHQIMAGGQLVHRTMAGLARGLGDAPLLSLRLGEVPVVVASSADAAREIMSRHDAKFATRPWSPTVRVQMVDGEGLAFAPYGALWRQLRKITMVELLSPRRVRSFRRVREEEVGRLVVAVATAATRRPGEAAVNVGERLTVLITDIAVRTIIGDRFERREDFLDAAAEWVKIMSGFSLGDLFPSSRLASFVSGTVRRAEANHRKNFELMDYALKQHEEKRAAAAAAGAGAVEDDEDIVDVLLRIQKEGGLEVPLTMGVIKGVIRDLFGAGSETSANTLQWTMSELVRNPRVMQKAQTELRDCLRGKQSVSEDDLIGLKYLKLVIKETLRLHPVVPLLLPRECQETCNIMGYDMLKGTNVLVNVWAICRDPRHWENAETFIPERFEDSTVDFKGTDFEFIPFGAGRRMCPGLAFAQVSMELALASLLYHFDWELPSGVAPSNLDMEEEMGITIRRKNDLYLVPKVRVPL
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLima_02g0006790 | OsLima_02g0006790.02 | Chr02 | 4909012 | 4925659 | + | NAM | ||
CDS seq | atggctgagctcataatgaatccaagaacaatgctgaaggcacaagcagagttacgtgatgccctccaaggaaagcaaatagtgtcagaatatgacttggttaaattgaagtatttgaaacttattatcaaggagaccttaaggttacatcctgtggtgccactacttctccctagggaatgtcaagagacatgtaaggtcatggactacgatatccccataggtactattgtgcttgtgaacgtgtgggtaatcggtagagaccctaagtattgggatgacgccaagacatttagactcgagcgatttgaggatggccatgtagattttaaaggaatgaactttgaatatttaccttttggagcagggcgaaggatgtgccctggtgtggcatttgcagaaccaattatggagctcgctctagcctcattgctctatcactttgattgggagttccccgatggcatctcgccggtcaagatggatatgatggaggtgatgggttctaccaaggtggcgtggtgcgcttgcttcctcttcctggctcttatggtggttaggttgaggacgaagcggcgtggcgacaataatggcggggtgaagttgccgcctgggccgtggcgactgccgctcgtcggcaacctccaccaggtcatggcgcgcggcccgctcgtgcaccgcaccatggccgacctggcgcgccggctcgacgcgccgctcatgtcgctcaggctcggcgaggtccccgtcgtcgtcgcctcgtccgccgacgccgccagggagatcaccaagacgcacgacgtcgcgttcgcgacacggccgtggagcccgaccacgcggcggctgcggtgcgacggcgagggcgtggtgttcgcgacgtacggcgcgctgtggcgccagctccgcaagctgtgcgtcgtcgagctgctcggcgcgcggcgcgtccggtcgttccgccgcgtccgcgaggaggaggcgcgccgcctcgtcgccgccgtcgccgcgtccccgcgcggcgaggccgtgaacgtcagcgagcggatcacggcggtgatcacggacgcgacgatgcgggccatgatcggggacaggttcgggcggcgcgacgagttcctggagctgctcgccgacatcgtcaagatcggctccgggttcagcctcgacgacctgttcccgtcgtggcgtctcgccggcgccatcggcggcatggcgcgccgcgccgaggcgaaccaccggaggacctacgagctgatggacagcgtgttccagcagcacgaacagcggagggttcacgttgctgcgccggctgacggcgccatggacgacgcggaggaggacctcgttgacgtgctcttcaggatacagaaagatggtggcctcgaggtgcctctcaccattggcaacatcaaagcaatcatcctggacctcttcaatgcagggagtgagacatcagcaaatacgctccagtgggttatgtcagagctaatgaggaacccaaaagtgatgagaaaagcacaagcagagttaaggaacaacctacaagggaagacaacggtaaccgaagacgatctcacaaatctaaagtacctgaagcttgtcatcaaggagacgcttaggttacatcccgtgctgcccttacttctcccaagagagtgccaagaagcatgcaatgtcatcgggtacgacgtccccaaatacactaccgtttttataaacgtgtgggcaatcaacagggaccccaaatattgggacatggccgagatgtttaagccagaacgctttgacaatagcatgattgacttcaaaggtacagacttcgagttcgtgccatttggggctggaagaaggatctgtcctggcatagcatttgcacagtccaatatggagcttgtgcttgctacactcctataccactttgactgggagcttcctagtggtatgtcgcctgaagagttagatatgactgaggacatgggactatctgtccgaaggaagaatgatctttacctacatccaacagtctcgtgcttcgccgccgccgccgccgccgccgtcgtcgtcgtggttctcttgctcgcccgcatgctcctcgcgccgcgcggggagtgggacgggctgaacctgccgcccagcccgccgcggctgccgttcatcggcagcttccacctcctccgccgcagcccgctcgtccaccgcgcgctggccgacgtcgcgcggcagctcggctcgccgccgctcatgtacatgaggatcggcgagctcccggccatcgtcgtgtcgtccgccgacgcggcgcgcgaggtcatgaagacgcacgacatcaagttcgcgtcgcggccgtggccgccgacaatccggaagctgcgcgcgcaggggaagggcatcttcttcgcgccctacggcgcgctgtggcgccagctccgcaagatctgcatcgtcaagctgctcagcgtccgccgcgtcagctcgttccacggcgtccgcgaggaggaggccggccgcctagtcgccgccgtcgccgcgacgccgccgggacaggccgtgaacctgaccgagcggatcgaggtggtcatcgcggacacgacgatgcgccccatgatcggggagaggttcgagaggcgtgaggacttcctcgagctcctcccggaaatcgtcaagatcgcctccgggttcagcctcgacgacctgttcccgtcgtcgtggctcgcctgcgccatcggcggctcgcagcgccgcggcgaggcgagccaccggacatcctacgagctggtggacagcgccttccgccagcggcagcagcaaagggaggccatggccgcgtcgccgcctgacatcgccaaggaggaggaggatgatttgatggatgatctcatcaggatacacaaggaaggtagcctcgaggtgcctcttactgctggcaacttgaaagccgtcatcctagatctctttggtgctggaagcgagacatcctcggatgcgctccaatgggcaatgtcagagctgatgagaaacccaagagtgatggagaaagcacaaaacgaggttcaaagcatcctcaaagggaagccatcggtgaccgaagccgacgtagccaacctaaagtatctgaaaatgattgtcaaggagactcataggctacacccggtgttaccgttgctcatcccaagggagtgccagcaaacttgccagatcatggggtatgatgtgccccaaggtagtgtcatatttataaactcgtgggcgataatgagggaccccaagcattgggatgatgccgagactttcaaaccagagcggtttgaggatggtgagatcgacctcaagggtacaaactatgagttcacaccatttggggctggacgtaggatctgccctggcttggcattagcccaggccagcatagagttcatgctcgccactctgctctaccacttcgactgggagctccctaacggggctgcaccggaggagctggacatgactgaggagatgggcatcaccatccgaaggaagaaggatctctacttgctcccaactctccgtccaccacccgccgccatggagcaggtctcgtgcttcgccgccgccgccgccttcgtcctcgttgttctctcgctcgctcgcatgctcctcgcgccgcgcagggagtgggacgggctgaacctgccgcccagcccgtcgcggctgccgttcatcggcagcttccacctcctccgccgcagcccgctcgtccaccgcgcgctggccgacgtcgtgcggcagctcggcgcgccgccgctcatgtacatggagatcggtgaggtcccggccatcgtcgtgtcgtgcgccgacgcggcgcgcgagatcatgaagacgcacgacatcaacttctcgtcgcggccgtggccgccgaccgtccagaagctgcgcgcgcaggggaagggcatcttcttcgagccctacggcgcgctgtggcgccagctccgcaagatctgcatcgtcaagctgctcagcgtccgccgcgtcagctcgttccacggcgtccgcgaggaggaggccggccgcctcgtcgccgccgtcgccgcgacgccgccgggacaggccgtgaacctcaccgagcggatcaaggtggccatcgcggacaccacgatgcgccccatgatcggtgagaggttcgagaggcgggaggacttcctcgaggtcctcccggagatcgtcaagctcgcctccgggttcagcctcgacgacctgttcccgtcgtcgtggctcgccggcgccatcggcggctcgcggcgccgcggcgaggcggtcaaccgggcgtcctacgagctggtggacagcgccttccgccagcggcagcagcaaaaggaggccatggctgcgccgccgcctgacatcgccaaggaggaggaggatgacttgatggatgagctcatcaggatacacaaggaaggtagcctcgaggtgcctcttactgccggcaacttgaaagctgtcatcctagagctcttttgtgcgggaagtgagacatcctcgaatgcgatccaatgggcaatgtcagagctggtgaggaacccaagagtgatggagaaagcacagaacgaggtgcgaagcatcctcaaagggaagcccacagtgactgaggccgacatggtagacctaacgtatgtgaagatgattgtcaaggagactcataggctgcatccggtattgccattgctcaccccaagggtgtgctag
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Protein seq | MAELIMNPRTMLKAQAELRDALQGKQIVSEYDLVKLKYLKLIIKETLRLHPVVPLLLPRECQETCKVMDYDIPIGTIVLVNVWVIGRDPKYWDDAKTFRLERFEDGHVDFKGMNFEYLPFGAGRRMCPGVAFAEPIMELALASLLYHFDWEFPDGISPVKMDMMEVMGSTKVAWCACFLFLALMVVRLRTKRRGDNNGGVKLPPGPWRLPLVGNLHQVMARGPLVHRTMADLARRLDAPLMSLRLGEVPVVVASSADAAREITKTHDVAFATRPWSPTTRRLRCDGEGVVFATYGALWRQLRKLCVVELLGARRVRSFRRVREEEARRLVAAVAASPRGEAVNVSERITAVITDATMRAMIGDRFGRRDEFLELLADIVKIGSGFSLDDLFPSWRLAGAIGGMARRAEANHRRTYELMDSVFQQHEQRRVHVAAPADGAMDDAEEDLVDVLFRIQKDGGLEVPLTIGNIKAIILDLFNAGSETSANTLQWVMSELMRNPKVMRKAQAELRNNLQGKTTVTEDDLTNLKYLKLVIKETLRLHPVLPLLLPRECQEACNVIGYDVPKYTTVFINVWAINRDPKYWDMAEMFKPERFDNSMIDFKGTDFEFVPFGAGRRICPGIAFAQSNMELVLATLLYHFDWELPSGMSPEELDMTEDMGLSVRRKNDLYLHPTVSCFAAAAAAAVVVVVLLLARMLLAPRGEWDGLNLPPSPPRLPFIGSFHLLRRSPLVHRALADVARQLGSPPLMYMRIGELPAIVVSSADAAREVMKTHDIKFASRPWPPTIRKLRAQGKGIFFAPYGALWRQLRKICIVKLLSVRRVSSFHGVREEEAGRLVAAVAATPPGQAVNLTERIEVVIADTTMRPMIGERFERREDFLELLPEIVKIASGFSLDDLFPSSWLACAIGGSQRRGEASHRTSYELVDSAFRQRQQQREAMAASPPDIAKEEEDDLMDDLIRIHKEGSLEVPLTAGNLKAVILDLFGAGSETSSDALQWAMSELMRNPRVMEKAQNEVQSILKGKPSVTEADVANLKYLKMIVKETHRLHPVLPLLIPRECQQTCQIMGYDVPQGSVIFINSWAIMRDPKHWDDAETFKPERFEDGEIDLKGTNYEFTPFGAGRRICPGLALAQASIEFMLATLLYHFDWELPNGAAPEELDMTEEMGITIRRKKDLYLLPTLRPPPAAMEQVSCFAAAAAFVLVVLSLARMLLAPRREWDGLNLPPSPSRLPFIGSFHLLRRSPLVHRALADVVRQLGAPPLMYMEIGEVPAIVVSCADAAREIMKTHDINFSSRPWPPTVQKLRAQGKGIFFEPYGALWRQLRKICIVKLLSVRRVSSFHGVREEEAGRLVAAVAATPPGQAVNLTERIKVAIADTTMRPMIGERFERREDFLEVLPEIVKLASGFSLDDLFPSSWLAGAIGGSRRRGEAVNRASYELVDSAFRQRQQQKEAMAAPPPDIAKEEEDDLMDELIRIHKEGSLEVPLTAGNLKAVILELFCAGSETSSNAIQWAMSELVRNPRVMEKAQNEVRSILKGKPTVTEADMVDLTYVKMIVKETHRLHPVLPLLTPRVC
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLima_02g0006790 | OsLima_02g0006790.03 | Chr02 | 4925518 | 4930171 | + | NAM | ||
CDS seq | atgtacctcgccactcgtggctgctttaataaactctccgtgctgccgcctgggccgtggcggctgccggtcatcgggagcctgcaccacgtggtgggcgaccggctcctccaccgctccatggcgcgcatcgcgcgccggctcggcgacgcgccgctcgtgtacctgcagctcggggaggtccccgtcgtggtggcctcgtcgcccggcgccgcgcgcgaggtcacgcggacgcacgacctcgcgttcgccgaccgggcgctcaacccgaccgcgcggcggctgcggcccggcggcgccggggtggcgctcgcgccgtacggcgcgctgtggcgtcagctccgcaagatctgcgtcgtcgagctcctcagcgcgcgccgcgtccggtcgttccgccgcgtccgggaggaggaggccggccgcctcgtgggcgcgctcgccgccgccgccgcgtcgcccggcgaggaggcggccgtcaacttcaccgagcggatcgcggaggccgtctcggacgcggcgctgcgcgccatgatcggggacaggttcgagcggcgcgacgagttcttgcaggagctcaccgagcagatgaagctcctcggcgggttcagcctcgacgacctgttcccgtcgtcgtggctggcgagcgccatcggcggcagggcgcggcgagcggaggcgaacagcaggaagctctacgagctcatggactgcgccatccggcagcaccagcagcagcgggcggaggccgccgtggtagacggcggcgccggcgtcgaggacgacaagaaccaagacctcatagacgatctctttagtggaggtagcgagacatcggcgactacgcttcaatgggcgatgtcggagctaataaagaacccaatggttatgcaaaagacacaagccgagctacgtgacaaacttaggagaaagccaactgtgacagaggatgatttgtctggcttaaagtatgtaaagctcattattaaggagaccctaaggcttcaccctgtggtaccactgcttgtcgcaagagagtgtcgtgaatcatgcaaagtcatggggtatgatgttccaaaaggcaccactgtatttgttaacgtgtgggctatcggcagagacccaaagtactgggatgacgctgaggagtttagaccagaacggtttgaacacagtactgttgacttcaagggcgtggacctcgagttcataccgtttggcgcaggacgaagaatatgtcctggtatggcattcgcagaagcaatcatggaacttctgcttgctgcactgctctaccactttgactgggaactccctaatggaatggtagcgagcgagctggatatgacagaggagatgggcatcaccgtccggaggaagaatgaccttcacctccgccccatcctccgtgtgttgtaa
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Protein seq | MYLATRGCFNKLSVLPPGPWRLPVIGSLHHVVGDRLLHRSMARIARRLGDAPLVYLQLGEVPVVVASSPGAAREVTRTHDLAFADRALNPTARRLRPGGAGVALAPYGALWRQLRKICVVELLSARRVRSFRRVREEEAGRLVGALAAAAASPGEEAAVNFTERIAEAVSDAALRAMIGDRFERRDEFLQELTEQMKLLGGFSLDDLFPSSWLASAIGGRARRAEANSRKLYELMDCAIRQHQQQRAEAAVVDGGAGVEDDKNQDLIDDLFSGGSETSATTLQWAMSELIKNPMVMQKTQAELRDKLRRKPTVTEDDLSGLKYVKLIIKETLRLHPVVPLLVARECRESCKVMGYDVPKGTTVFVNVWAIGRDPKYWDDAEEFRPERFEHSTVDFKGVDLEFIPFGAGRRICPGMAFAEAIMELLLAALLYHFDWELPNGMVASELDMTEEMGITVRRKNDLHLRPILRVL
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLima_02g0006790 | OsLima_02g0006790.04 | Chr02 | 4894641 | 4894853 | + | IsoSeq | ||
CDS seq | gaaagaacgatctttaccttattcctgctgtccgtgtgcctttgtcaactgtcttatagttgtttacacttacaaatagtatgtttgtctcgtataaatagtatgtttgtctcgtatgtacgt |
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Protein seq | ERTIFTLFLLSVCLCQLSYSCLHLQIVCLSRINSMFVSYVR |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.050209 | 1.296661 | None |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0185500 | RBH | 0.0 | 0.0 | 0.000000 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g09260 | RBH | 0.0 | 0.101170 | 0.185180 |
Nipponbare | IRGSP 1.0 | RAP-db | Os02g0186100 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0006500 | SBH | 0.048737 | 0.000000 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0006630 | RBH | 0.000000 | 2.286570 | 1.663732 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0006420 | SBH | 0.0 | 0.901611 | 3.168767 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0006390 | RBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0006390 | RBH | 7.072862 | 40.867245 | 5.219444 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0080900 | SBH | 0.291971 | 9.780597 | 0.011101 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0006370 | SBH | 0.000000 | 0.095334 | 0.684129 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0083400 | RBH | 0.260263 | 3.9379715 | 0.036648 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0025910 | SBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0006390 | SBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0006620 | RBH | 11.448141 | 55.997776 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0006660 | RBH | 0.378911 | 0.377817 | 0.812027 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0006390 | SBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G006500 | RBH | 0.617630 | 5.825593 | 0.997042 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0006470 | RBH | 5.127800 | 35.923454 | 1.488500 |