Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_02g0006470 | OGI:02014330 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr02:4583622-4593302 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | attcgacaactaagctactagctagctagctcaatacgccatggccatggcgcaagatgtcaccggctacctctgcctcttcgtggctctcctcgtgttgctcaaggtggtgaggaAggcgagcggcaatggcgcggccgGacggCtgaggctcccgccggggccgtggcggctgccggtcatcggcaacctccaccaGgtcgcgatgggcgggccgctcgtccaccgcaccatggccgacatggcgcgccggctcgacgcgccgctcatgtcgctcaggctcggcgagAtccccgtcgtCgtcgcgtcgtccgccgacgccgccagggagatcaCcaagacgcacgacgtcgcgttcgcgacgcggccgctgagctccaccatCcgggtgatggtgtccgacggggagggcctcgtgttcacGccctacggcgcgctgtggcggcggctccgcaagatcgccatgctcgagctcctcagcgcccGccgcgtccagtcgttccgCcgcgtccgggaggaggaGgtcggccgcctcgtcgccgccgtcgccgccgcggccgcggcgcggccgggagaggccgtgaacctcagccagctgatcgcggagctcatctccgacacGgcggcgcgcacgatcatcggcgacaGgttcgagaagcggcaagaattgctggaagggctcaccgaGgggatcaggatatcatctgggttcaGcctcggcgacctgttcccgtcgtcgaggctggcgaacctcatcggcggcacgacgcggcgagcggaggcgaaccaccgcaagaacctggcgctgatagagtgcgctctcagGcagcacgaggagcggagggccgccggagacgaggaagacgacgaggacctcgtcgatgtgcttctcaGggttcagaAGgAagggggcggcgaagtgCctctcaccatgggcaacgtcaaagtcgtcatccgtgtaagtAgccttttgttttgttGgtagtaataattggacaaaagtacaaatcgatcgtctgtatgcttgcatgctatcatgatagactgtcttttgtccgtttctCttcctcttatctcctatagtatatacatataacTttctttcaccagactttAaatgatattatttttcagaattatcattccagtttatgatccgtttacattattgcattcgttatataatttaatctcgtaaTaagatctcacacggttAtaTtttaacaataaattatatatgtcctgaaaatcaaccgttgtatcatcacttgtagaaaattctttcgtcacttGgttaattgtgactctctttgtggagtgttttagaaagatgaaACAtttacaaaatattgactgcaacaataacaaccattgcacgaaacattAagtcctAacgagtaaaACAcataaaaatttcatatgAagcatttttatacccgacatAaacaatcaagttgtaatatAagaaataataattactaacatatccaaaagcataagtctaacatttacaaattacctagtgaaacatgagaAaatagttattgaaatattcaaatagaataagtgcaacattatAaaagttccattgtaaaaaaaccatcAaaatataatcatataagatcttgttataaagatttgattatgacaaattcaatggtgtAattaGatcatgtattggataaataatttAagagAaaaatttatttaaaatttAAaaattcaagtAgacacgtgtctttcatcaatctttcagaaatacttctgctacAtctaATtgctgcctttgtcatGggcccctcacacccacctaaactgttaccaacaTttgataatctaggagaggcagAaagcgttcgAttttttccctcaggcttGggtgcccGaggggaagcattctccataatAattagaggcaattgtatttctgtccttaatttacatctcaattgtgattttaccccTATttttttagGAtttgtgattttGcccctgttttttttttgaaacgaagcagccgTctgcccctGgtttggacggtagtttcgtggcctgggatttccgaattaaacgatGaaagaaaatgctattataatttgtgAatgactattctagccTtgcttcaatgaaaCaActaaggctctgttAttttggttgagttgggaacccatccctccgttacaaaaaacgaagcagtccattagcacatgattattaattatttgagcggcggaaaggagcggcgcggctctgtcggcgcgtcggcgcgacggctccgtcggtgcggccccgcggtgttgcacgcgcaggagaccggcggccgctgggcgccgcggccgaggagcagcggagaggagcggcggctccgtcggcgcgtcggccccgcggtgttgcacgcgcagggagacgccacggccggcggccccacagccagcgagcaggaagtgtgcttgcagcgagccagcaagcagcgagcagaaattattgttgaaattttgtccttcatagtgtgctgttatcttctataatttgtgtccaaaTtattgatgaatttctgtcAaaattttgtcaaaaatattgttctgacatcgtttataaactgtgttcaaattattgcgaaaattctatcaaaatatccaaatattgtgttctatcAacttttacaaaatttgtgaacatttatttcccatatgAaatttgctcaaaattaacttgaaacatgtatgctgtgcaagccaaaacatgtctaggggtatacttgtccattcaccacacatttaacaccgttaccaTcagttaatagagtaggggcaggcagctgcttcgtttaaaaaaagtaggggcaaaatcacaaaccctAaaaagcaggggtaaaatcacaattgagatgtaaagtaagggcagaaacacaattgcccctaataattatatatctccattgaTttcaattggatgTAataagtttatttataatctccaattctaaattttaactggcagagaattatttggagaagtgggtgatattaaattatttggaccattcttaGctagacattatgcaatataTtggagggctataaaaatattagttttgcattGggactctaagatctaacatgttatgaaatctctttaggatataaatctatcgacatatttattttatatcctaaattAatttactaattaagtattggtgaaaataataaacaccttgtaaaataaatggagtgagtacatgaaaacaaaacatatgcatatttgactttgaggcctatggttttgtatgtgactttaggtaaattgtatttcttttgacatgaattctgtaggagatgtttggtgccggaagtgagacatcagcgaatacgctccaatggttgatgtccgagctcatactaaatccaagagtgatgtcgaaggcacaagttgaattaagtgacacccttcgaggtaaacaaactgtgacagaagatgacttggctggattgaaatacttgaagcttattatcaaggagaacttgcggttgcatccagTggtgccgctgcttctcccgagagaatgccagaagacatgtaaggttatgatgtacgatgttcccgttggtaccactgtgctcgtgaatgtgtggtcaattAatagagatccaaagtattgggaGgaccctgaaacattcaaacctgagcgatttgaagatggtcatatagatttcaaaggaacagattttgagttcataccatttggagcagggcgaagaatgtgcccaggcataacatttgcagaagcaatcatggaactcgctctcgcctcactactcTatcattttgactggaagctcctcggcaatggcatttcgtcaaccaagttggacatgacagaggagctaggtgctaccgttcgaagaaagaatgacctctaccttgttccaaccattcgcgtgcctctaccggctgactcataactgttcagatatagcatccctctagctacatgtatgagaatAagctagaagcctagaatgattgatgctacttgtacccttaaagtatgttttctttcctaaaattatagtgtAgatatattctggttgtatttgtggctttactgatttcaagttatactattatatatacttcctccgtcgtaaaatAaaccaacttttaTatatgaatctgaatatagcctatgtcagatttatacacaaaaaatggtttattttcAaacagatggagtacatgttagttacttcctccgtcccaaaatgaagccatttttgaggttggcacgggtattaAGaaagtaggtaagaatgattggaagaagtatgtgattggttgaaaagagaaaGtaggtgaagaagaatggttgtgattggttgagaggaggaggtatgtgaagaaatagcttcattttgggacaagacactgtgctagaaatagctacattttgggacggagggagtaatgattaacaactgcaaagtcgaTtTGGGTCGTGTATCGCAAAAATAATTAATATTGGTTTTTTTTATTAATAGACTTCAATAATTGTAATCTCCTTTTGTTAGTTTGGATTCTTTATTTTTGTTACGGTGTGTTCTATTTAATTAGATCTACGCTTCTTTATAATAATTGTCTATAGCTCTGTTTGAGTAAATACCGGGATAATATATTCCATTATCTAAAAAAAATTGGTTTTTTTATCACTCGGCTCTCGGCTGTCACCTCCTCTGCTCATACCAGCTATCACTGGGTATTCTCAGTTTCTCATGCATCTGCATGCAGAGCCGGAACATCTAAGCTGTCACCTCTTGCGCTGGGAATTGGCACGCACACTGCTGCCGCTCTGACGACGCGACGCTCGTTGCCGGCAATGGCGATGATGAGTGAGGCTGCCCGGCCGCGTCGTCGCCTCTCCTCTCAACCGCCGACGACGCCACGAGCGGATCAGCGTACGCACCGTATGTGCTCGTCATCGACGGAGACCGGAGATTTGGGGCATCGATGTCGTCAAAACAGAATCACCAGAATACTAAGGATCACCACGGTATCCTTACGGCCTTGTTCGGTTACACAAGGATTCGTTCCGGGTCGGGAATGACAAGTATAGTAACAAATTTATGCTAGATACAACGAGAGATCAAGATCGAGAGATTGAGATTTATTCCCCGCTGGGAACCAATTTACTTATGATATGAACAATAAGAGACCGGTAATCAATTCACTAGTCAAGAAGTGTGGAACTAATCCAGATGTTTTGTTGTACCTAATATAAGTAAATTGGTTCCCGACCCAAaaataaatcccggtctcttgttgtacctattataaatttcttgttatacatatcattttcgaccctgaacgaatccttgtgtaaccgaacaaggctaccttggtttgtccggtgccggagaagaagatcatagagggcagagcagaagagctcGggatgtggaacttgtcgaggcgcgcatccgctcggGCgcgccggtcgtcggcggccgcagcttgcggaagagaaggagcGggccagacgaactaggcatgatacgttgtttggtggcccatgatccagccccccccctcccccttaaggatcaaagagAataTtttggggaatcaattttatctttaattgttcggttgatctctctcgaaacagggAaatttaaatgggcttattcaagatactatttttttctcctcatgattcaatcatcaaattttaactagAaaaaaatgcccgtgcgttgcaacgggaagaaaattcgagaaaattaagAaaaagttgagaaagttttacattatgtAattaattAaaatacaaatttcaccatcttccttatataaagaaactatgtgtgtGtgtctgtaattgcaatttcatccccgctacatatgaaaatcgcaattacacacatatacgatgttgaagaaaaaaaagacccataaaaatcaaggtgaattctaaactgacctggatatatgttaggtctggtgatattgtaggtcgtactatcttgttttggagtggcttgataaagcagtcgtggatgggacgttgggactggctcgttttgtcgtgagaccgtcacggatggaaacacagaaacatgcggtcaacagacggacgccgaatcgggaacacacggatgaactattggagttgcatgtaatgttgcgtcctagttgcacatcccctcTaaagagaagatgacatcattgagttcatagatctcgggaacatgtttttatcaagcattttcgattgatcaattgacctctgttttgtgatgatgcatatttaaattgcatgattggggggataggacatacgtatatatcatcctaatccaaattaagaatgggatggattgtccttcctgattttttaagggatttatAaatcatttaataaattattcctataatttatactaaagtttaattaattttatggtgaagtaaatgtgagaaataaaattttctaaataaaatatggttggatttaacTtttattaaattAaaaataaTtaattacactatctgaaatttttcagaatcttcagagctcaattgataattttaataatacaaccatcatttcagcatttatttaaatagaattctaaataaaaaccctcctttctctctgggccattttttagtccatttcttccctcatcccccagccgagccggcccgttttctttccttctcctcccctccgcctatagcctgcaagcgcatcaagCccatcAaacaacaaaaagtctaaaagttttccctcttctcctccttcactgtcgcgtgggtcctgcagctacatggtcatcatctacctccggccggacacccgcagcttcccgacactgtgtgcaatcgtttcctccgtgaaatccggtAacatagataatccaaaattaattgagaggtttggattcttatctcatcctctttctgttttctcaagaatcagagcaaaacctcaccatatcatgctcggaatcgaaccctatcctaaccctaaagtttctcatctcagagtcggtttcgctagagtttcccatcgcgcatacacgactacgacggatgaaaatcgtcacagaatccttacgtattttttaattaggtatagatatagatatagaTttgaatcggaccaataTTttttttcgcattggaatcaaatgaGattttcttttcacattggacgcggtgccgaactagattttttttatggacgacataagtgtcttcgtctttctAaactgtagagatagagatagagAaaacatcgtgtgactcggttcgcataggacaaggaagttgttatactatgttacatctatttgcacctatcgtacgtattattttgtttgttttcaaatgtaatgtactcattaattaaaaaaaattgatgaaacttctctgTatataccattccttgcTagttctctttggaattaagatttttaagtgctgGacacgccttacataccgacctagacgctatggccatggtgcaagatgccacgggctacttgagCcttttcttggctctcctctcgatcactctcgtgctccacaaggtggcgaggaaggcgagcggcgatggcgccggcaagccgaggcttccgccggggccatggcggctgccggtcatcggcaacctccaccagatcgcgatgggcGgcccgctcgtgcaccgcaccatggccgacctggcgcgccggcacgacgcgccgctcatgtcgctcaggctcggtgaggtccccgtcgtcgtcgcgtcgtccgccgacgccgccagggagatcaccaagacgcacgacgtcgcgttcgcgacgcggccgtggagctccaccgtccgtgtcctgatgagcgacggggtcgggctggtgttcgcgccctacggcgctctgtggcggcagctccgcAagatcgccatggtggagctgctcagcgcccgccgcgtccagtcgttccgcggcatacgggaggacgaggtcggccgcctcgtcgccgccgtcgccgccgcctcggcggcgcagcccggcgaggccgtgaacgtcagcgagcgcatcgccgtgctcatcgccgactcggtggtgcgcgcgctcatgggcgacaggttcgacaggcgggacgaattcctggatcagctcgccgagagggtcaagatcacctccgggttcagcctcggcgacctgttcccgtcgtcgaggCtggccagcttcatcggcggcacgacgcgccgcgcggaggcgaaccaccgcaagaacttcgagctgatagagtgcgctctgaggcagcacgaggagcggagggcggcgcgcgccggcgccgctgccgccggagctgtggacgacgatgaggacctcgtcgatgtgcttcttaggattcagaaggaaGggaagctcgaagtgcccctcaccatGggcaacatcaatgccgtgatctatgtgagtagccatatatatttctttgtatatatttttctttcaaattcgatgcaaatagttgtgaaaaattctAaaaaaaaaatgtttcccactctttctgctgtggaagttaatagtatcagtatcaccctcgattttcgtatgatgtatattaatGttaaaaatagtaaatttcagccattgattcgttgcaaaataatagtctctggcttaaagAattgagttgtgggcttttagctggtcaccacggttaatacttttaaattagtagttagtcgtttaaattacttttagtttatatatttttatttagtccttctgtagtcccctgacagcctctgatagaaagtgaatcggaactaaagatgatcaccaaccgaaactaaagatcatatagtcccgctgcgatacccGgttcctactcgaacaaggactaatatcatttttgtttgacccacgaaagatcagttctccagcagtgttgttaatctttaaaatacttgtacatatacaagacatatatgTgtaattgtgcctaatttcaatacacggtttcatagaggcaagaatttttttatgcattatgtaggacctttttggtgccGggagcgagacttcagcgaatacactccaatgggtaatgtctgagctcatattgaacccaagggtgatgctgaagttacaagccgaattacgtggcatccttcaagggAagcaaagagttacagAagatgacttggttgaattgaaatatttgaagcttgtaattaaagaaaccttgcggttgcatcccgtggttccactacttctcgcgagagaatgccaggatacatgtaagattatgggatacgatatccccgtcggtactatagttttcgtgaacgtgtgggtaatatgcagagaatcaaagtattggAaagatgccgagacatttagaccagagcgatttgagaatgtttgtgttgacttcaaaggaacgcactttgaatacataccatttggagcaggtcgaagaatgtgccctggtgtagcatttgcagaagcaagcatggagcttgttctagcctcgctcctctatcactttgattggaagctacccaatgacatcttgccaaccaaactggatatgacagaAGaaatgggtcttagcattagaagaaaaaatgatctttatcttatcccaactatttgtgtgcctcctctggcagcctag
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| CDS seq | atgattgatgctacttacgctatggccatggtgcaagatgccacgggctacttgagCcttttcttggctctcctctcgatcactctcgtgctccacaaggtggcgaggaaggcgagcggcgatggcgccggcaagccgaggcttccgccggggccatggcggctgccggtcatcggcaacctccaccagatcgcgatgggcGgcccgctcgtgcaccgcaccatggccgacctggcgcgccggcacgacgcgccgctcatgtcgctcaggctcggtgaggtccccgtcgtcgtcgcgtcgtccgccgacgccgccagggagatcaccaagacgcacgacgtcgcgttcgcgacgcggccgtggagctccaccgtccgtgtcctgatgagcgacggggtcgggctggtgttcgcgccctacggcgctctgtggcggcagctccgcAagatcgccatggtggagctgctcagcgcccgccgcgtccagtcgttccgcggcatacgggaggacgaggtcggccgcctcgtcgccgccgtcgccgccgcctcggcggcgcagcccggcgaggccgtgaacgtcagcgagcgcatcgccgtgctcatcgccgactcggtggtgcgcgcgctcatgggcgacaggttcgacaggcgggacgaattcctggatcagctcgccgagagggtcaagatcacctccgggttcagcctcggcgacctgttcccgtcgtcgaggCtggccagcttcatcggcggcacgacgcgccgcgcggaggcgaaccaccgcaagaacttcgagctgatagagtgcgctctgaggcagcacgaggagcggagggcggcgcgcgccggcgccgctgccgccggagctgtggacgacgatgaggacctcgtcgatgtgcttcttaggattcagaaggaaGggaagctcgaagacctttttggtgccGggagcgagacttcagcgaatacactccaatgggtaatgtctgagctcatattgaacccaagggtgatgctgaagttacaagccgaattacgtggcatccttcaagggAagcaaagagttacagAagatgacttggttgaattgaaatatttgaagcttgtaattaaagaaaccttgcggttgcatcccgtggttccactacttctcgcgagagaatgccaggatacatgtaagattatgggatacgatatccccgtcggtactatagttttcgtgaacgtgtgggtaatatgcagagaatcaaagtattggAaagatgccgagacatttagaccagagcgatttgagaatgtttgtgttgacttcaaaggaacgcactttgaatacataccatttggagcaggtcgaagaatgtgccctggtgtagcatttgcagaagcaagcatggagcttgttctagcctcgctcctctatcactttgattggaagctacccaatgacatcttgccaaccaaactggatatgacagaAGaaatgggtcttagcattagaagaaaaaatgatctttatcttatcccaactatttgtgtgcctcctctggcagcctag
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| Protein seq | MIDATYAMAMVQDATGYLSLFLALLSITLVLHKVARKASGDGAGKPRLPPGPWRLPVIGNLHQIAMGGPLVHRTMADLARRHDAPLMSLRLGEVPVVVASSADAAREITKTHDVAFATRPWSSTVRVLMSDGVGLVFAPYGALWRQLRKIAMVELLSARRVQSFRGIREDEVGRLVAAVAAASAAQPGEAVNVSERIAVLIADSVVRALMGDRFDRRDEFLDQLAERVKITSGFSLGDLFPSSRLASFIGGTTRRAEANHRKNFELIECALRQHEERRAARAGAAAAGAVDDDEDLVDVLLRIQKEGKLEDLFGAGSETSANTLQWVMSELILNPRVMLKLQAELRGILQGKQRVTEDDLVELKYLKLVIKETLRLHPVVPLLLARECQDTCKIMGYDIPVGTIVFVNVWVICRESKYWKDAETFRPERFENVCVDFKGTHFEYIPFGAGRRMCPGVAFAEASMELVLASLLYHFDWKLPNDILPTKLDMTEEMGLSIRRKNDLYLIPTICVPPLAA |
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| Function | Dolabradiene monooxygenase [UniProtKB/Swiss-Prot:A0A1D6GQ67] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0006470 | OsNaBo_02g0006470.01 | Chr02 | 4583622 | 4587690 | + | NAM | ||
| CDS seq | atggccatggcgcaagatgtcaccggctacctctgcctcttcgtggctctcctcgtgttgctcaaggtggtgaggaAggcgagcggcaatggcgcggccgGacggCtgaggctcccgccggggccgtggcggctgccggtcatcggcaacctccaccaGgtcgcgatgggcgggccgctcgtccaccgcaccatggccgacatggcgcgccggctcgacgcgccgctcatgtcgctcaggctcggcgagAtccccgtcgtCgtcgcgtcgtccgccgacgccgccagggagatcaCcaagacgcacgacgtcgcgttcgcgacgcggccgctgagctccaccatCcgggtgatggtgtccgacggggagggcctcgtgttcacGccctacggcgcgctgtggcggcggctccgcaagatcgccatgctcgagctcctcagcgcccGccgcgtccagtcgttccgCcgcgtccgggaggaggaGgtcggccgcctcgtcgccgccgtcgccgccgcggccgcggcgcggccgggagaggccgtgaacctcagccagctgatcgcggagctcatctccgacacGgcggcgcgcacgatcatcggcgacaGgttcgagaagcggcaagaattgctggaagggctcaccgaGgggatcaggatatcatctgggttcaGcctcggcgacctgttcccgtcgtcgaggctggcgaacctcatcggcggcacgacgcggcgagcggaggcgaaccaccgcaagaacctggcgctgatagagtgcgctctcagGcagcacgaggagcggagggccgccggagacgaggaagacgacgaggacctcgtcgatgtgcttctcaGggttcagaAGgAagggggcggcgaagtgCctctcaccatgggcaacgtcaaagtcgtcatccgtgagatgtttggtgccggaagtgagacatcagcgaatacgctccaatggttgatgtccgagctcatactaaatccaagagtgatgtcgaaggcacaagttgaattaagtgacacccttcgaggtaaacaaactgtgacagaagatgacttggctggattgaaatacttgaagcttattatcaaggagaacttgcggttgcatccagTggtgccgctgcttctcccgagagaatgccagaagacatgtaaggttatgatgtacgatgttcccgttggtaccactgtgctcgtgaatgtgtggtcaattAatagagatccaaagtattgggaGgaccctgaaacattcaaacctgagcgatttgaagatggtcatatagatttcaaaggaacagattttgagttcataccatttggagcagggcgaagaatgtgcccaggcataacatttgcagaagcaatcatggaactcgctctcgcctcactactcTatcattttgactggaagctcctcggcaatggcatttcgtcaaccaagttggacatgacagaggagctaggtgctaccgttcgaagaaagaatgacctctaccttgttccaaccattcgcgtgcctctaccggctgactcataa
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| Protein seq | MAMAQDVTGYLCLFVALLVLLKVVRKASGNGAAGRLRLPPGPWRLPVIGNLHQVAMGGPLVHRTMADMARRLDAPLMSLRLGEIPVVVASSADAAREITKTHDVAFATRPLSSTIRVMVSDGEGLVFTPYGALWRRLRKIAMLELLSARRVQSFRRVREEEVGRLVAAVAAAAAARPGEAVNLSQLIAELISDTAARTIIGDRFEKRQELLEGLTEGIRISSGFSLGDLFPSSRLANLIGGTTRRAEANHRKNLALIECALRQHEERRAAGDEEDDEDLVDVLLRVQKEGGGEVPLTMGNVKVVIREMFGAGSETSANTLQWLMSELILNPRVMSKAQVELSDTLRGKQTVTEDDLAGLKYLKLIIKENLRLHPVVPLLLPRECQKTCKVMMYDVPVGTTVLVNVWSINRDPKYWEDPETFKPERFEDGHIDFKGTDFEFIPFGAGRRMCPGITFAEAIMELALASLLYHFDWKLLGNGISSTKLDMTEELGATVRRKNDLYLVPTIRVPLPADS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0006470 | OsNaBo_02g0006470.02 | Chr02 | 4587644 | 4593302 | + | NAM | ||
| CDS seq | atgattgatgctacttacgctatggccatggtgcaagatgccacgggctacttgagCcttttcttggctctcctctcgatcactctcgtgctccacaaggtggcgaggaaggcgagcggcgatggcgccggcaagccgaggcttccgccggggccatggcggctgccggtcatcggcaacctccaccagatcgcgatgggcGgcccgctcgtgcaccgcaccatggccgacctggcgcgccggcacgacgcgccgctcatgtcgctcaggctcggtgaggtccccgtcgtcgtcgcgtcgtccgccgacgccgccagggagatcaccaagacgcacgacgtcgcgttcgcgacgcggccgtggagctccaccgtccgtgtcctgatgagcgacggggtcgggctggtgttcgcgccctacggcgctctgtggcggcagctccgcAagatcgccatggtggagctgctcagcgcccgccgcgtccagtcgttccgcggcatacgggaggacgaggtcggccgcctcgtcgccgccgtcgccgccgcctcggcggcgcagcccggcgaggccgtgaacgtcagcgagcgcatcgccgtgctcatcgccgactcggtggtgcgcgcgctcatgggcgacaggttcgacaggcgggacgaattcctggatcagctcgccgagagggtcaagatcacctccgggttcagcctcggcgacctgttcccgtcgtcgaggCtggccagcttcatcggcggcacgacgcgccgcgcggaggcgaaccaccgcaagaacttcgagctgatagagtgcgctctgaggcagcacgaggagcggagggcggcgcgcgccggcgccgctgccgccggagctgtggacgacgatgaggacctcgtcgatgtgcttcttaggattcagaaggaaGggaagctcgaagacctttttggtgccGggagcgagacttcagcgaatacactccaatgggtaatgtctgagctcatattgaacccaagggtgatgctgaagttacaagccgaattacgtggcatccttcaagggAagcaaagagttacagAagatgacttggttgaattgaaatatttgaagcttgtaattaaagaaaccttgcggttgcatcccgtggttccactacttctcgcgagagaatgccaggatacatgtaagattatgggatacgatatccccgtcggtactatagttttcgtgaacgtgtgggtaatatgcagagaatcaaagtattggAaagatgccgagacatttagaccagagcgatttgagaatgtttgtgttgacttcaaaggaacgcactttgaatacataccatttggagcaggtcgaagaatgtgccctggtgtagcatttgcagaagcaagcatggagcttgttctagcctcgctcctctatcactttgattggaagctacccaatgacatcttgccaaccaaactggatatgacagaAGaaatgggtcttagcattagaagaaaaaatgatctttatcttatcccaactatttgtgtgcctcctctggcagcctag
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| Protein seq | MIDATYAMAMVQDATGYLSLFLALLSITLVLHKVARKASGDGAGKPRLPPGPWRLPVIGNLHQIAMGGPLVHRTMADLARRHDAPLMSLRLGEVPVVVASSADAAREITKTHDVAFATRPWSSTVRVLMSDGVGLVFAPYGALWRQLRKIAMVELLSARRVQSFRGIREDEVGRLVAAVAAASAAQPGEAVNVSERIAVLIADSVVRALMGDRFDRRDEFLDQLAERVKITSGFSLGDLFPSSRLASFIGGTTRRAEANHRKNFELIECALRQHEERRAARAGAAAAGAVDDDEDLVDVLLRIQKEGKLEDLFGAGSETSANTLQWVMSELILNPRVMLKLQAELRGILQGKQRVTEDDLVELKYLKLVIKETLRLHPVVPLLLARECQDTCKIMGYDIPVGTIVFVNVWVICRESKYWKDAETFRPERFENVCVDFKGTHFEYIPFGAGRRMCPGVAFAEASMELVLASLLYHFDWKLPNDILPTKLDMTEEMGLSIRRKNDLYLIPTICVPPLAA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0006470 | OsNaBo_02g0006470.03 | Chr02 | 4587537 | 4587716 | + | IsoSeq | ||
| CDS seq | acctctaccttgttccaaccattcgcgtgcctctaccggctgactcataactgttcagatatagcatcc |
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| Protein seq | TSTLFQPFACLYRLTHNCSDIAS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 5.127800 | 35.923454 | 1.488500 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0184900 | SBH | 0.000000 | 0.444793 | 1.521383 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g09220 | SBH | 0.000000 | 0.290844 | 0.438793 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0184900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0006500 | SBH | 0.048737 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0006650 | SBH | 0.000000 | 0.247685 | 1.030326 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0006430 | SBH | 0.0 | 0.000000 | 0.672735 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0006370 | RBH | 0.011247 | 0.020465 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0006390 | SBH | 7.072862 | 40.867245 | 5.219444 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0081400 | SBH | 1.12522 | 11.593083 | 0.532187 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0006380 | RBH | 0.414991 | 0.050392 | 0.249546 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0083000 | SBH | 4.397418 | 2.520571 | 0.099118 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0006790 | RBH | 0.050209 | 1.296661 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0006350 | SBH | 0.327971 | 15.745680 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0006660 | SBH | 0.746377 | 3.657747 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0006600 | RBH | 1.058422 | 2.692011 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0006370 | RBH | 0.657172 | 7.011458 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G006500 | SBH | 0.617630 | 5.825593 | 0.997042 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0023710 | SBH | 0.121947 | 28.218290 | 0.000000 |
