Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_02g0006600 | OGI:02014330 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr02:4898031-4908108 | ||||||||
| Gene Symbol | CYP71D8L, OsCYP71D8L, - | ||||||||||
| DNA seq | atggccatggcgcaagatgtcaccggctacctctgcctcttcgtggctctcctcgtgttgctcaaggtggtgaggaaggcgagcggcaatggcgcggccggacggctgaggctcccgccggggccgtggcggctgccggtcatcggcaacctccaccaggtcgcgatgggcgggccgctcgtccaccgcaccatggccgacatggcgcgccggctcgacgcgccgctcatgtcgctcaggctcggcgagatccccgtcgtcgtcgcgtcgtccgccgacgccgccagggagatcaccaagacgcacgacgtcgcgttcgcgacgcggccgctgagctccaccatCcgggtgatggtgtccgacggggagggcctcgtgttcacgccctacggcgcgctgtggcggcggctccgcaaggtcgccatgctcgagctcctcagcgcccgccgcgtccagtcgttccgccgcgtccgggaggaggaggtcggccgcctcgtcgccgccgtcgccgccgcggccgcggcgcggccgggagaggccgtgaacctcagccagctgatcgcggagctcatctccgacacggcggcgcgcacgatcatcggcgacaggttcgagaagcggcaagaattgctggaagggctcaccgaggggatcaggatatcatctgggttcagcctcggcgacctgttcccgtcgtcgaggctggcgaacctcatcggcggcacgacgcggcgagcggaggcgaaccaccgcaagaacctggcgctgatagagtgcgctctcaggcagcacgaggagcggagggccgccggagacgaggaagacgacgaggacctcgtcgatgtgcttctcagggttcagaaggaagggggcggcgaagtgcctctcaccatgggcaacgtcaaagtcgtcatccgtgtaagtagccttttgttttgttggtagtaataattggacaaaagtacaaatcgatcgtctgtatgcttgcatgctatcatgatagactgtcttttgtccgtttctcttcctcttatctcctatagtatatacatataactttctttcaccagactttaaatgatattatttttcagaattatcattccagtttatgatccgtttacattattgcattcgttatataatttaatctcgtaataagatctcacacggttatattttaacaataaattatttatgtcctgaaaatcaaccgttgtatcatcacttgtagaaaattctttcgtcacttggttaattgtgactctctttgtggagtgttttagaaagatgaaacatttacaaaatattgactgcaacaataacaaccattgcacgaaacattaagtcctaacgagtaaaacacataaaaatttcatatgaagcatttttatacccgacataaacaatcaagttgtaatataagaaataataattactaacatatccaaaagcataagtctaacatttacaaattacctagtgaaacatgagaaaatagttattgaaatattcaaatagaataagtgcaacattataaaagttccattgtAaaaaaaccatcaaaatataatcatataagatcttgttataaagatttgattatgacaaattcaatggtgtaattagatcatgtattggataaataatttaagagaaaaatttatttaaatttTAaaaattcaagtagacacgtgtctttcatcaatctttcagaaatacttctgctacatctaatagctgcctttgtcatgggcccctcacacccacctaaactgttaccaacatttgataatctaggagaggcagaaagcgttcgaTtttttccctcaggcttgggtgcccgaggggaagcattctccataataattagaggcaattgtgtttctgtccttaatttacatctcaattgtgattttacccctactttttagggtttgtgattttgtccctgttttttttgaaacgaagcagccgtctgcccttggtttggacggtagtttcgtgggcccgggatttccgaattaaacgatgaaagaaaatgctattataatttgtgaatgactattctagccttgcttcaatgaaaCaactaaggctctgttcttttggttgagttgggaacccatccctccggtacaaaaaacgaagtagtccattagcacatgattaattaattatttgctaatttttttttcaaaaatggatcaatataaTttttttaagcaactttcgtatataaactttttgcaaaaaacacaccgtttagcagtttgaaaaacgtgcgcgcggaaaataagatgagggagttgggaactctaggaaacgaacagagcctaaatccctaaaccttgctgtccccgatccaatcgaaaaaccatgcaagcggcggcggcaggggcttacgcgacaggcggcggcgcgcggcagggaggagcggcggcttgggccagcgggcggtggagtcgggcgcggcggccctgaggagcagcggctccgtcgacgcggcggtgcggcggccctgtggagcggcggttccgtcggcgcggcggcgcggcggccccgcgggttgcaagcgcagggaggcacggcggccggcagccccgtgaccgaggagcggcggaaaggagcggcgcggctctgtcagcgcgtcggcgcggcggctccgtcggtgcggccccgcggtgttgcacgcgcaggagacgcggcggccggcggcgccgcggccgaggagcagcggagaggagcggcggctccgtcggcgcgtcggccccgcggtgttgcacgcgcagggagacgccacggccggcggccccacagccagcgagcaggaagtgtgcttgcagcgagccagcaagcagcgagcagaaattattgttgaaattttgtccttcatagtgtgctgttatcttctataatttgtgtccaaattattgatgaatttctgtcaaaattttgtcAaaaatattgttctggcatcgtttataaactgtgttcaaattattgcgaaaattctatcaaaattatccaaaatattgtgttctatcaacttttacaaaatttgtgaacatttatttcccatatgaaatttgctcaaaattaacttgaaacatgtatgctgtgcaagccaaaacatgtctaggggtatacttgtccattcaccacacatttaacaccgttaccatcagttaatagagtaggggcaggcagctgcttcgtttaaaaaaagtaggggcaaaatcacaaaccctaaaaagcaggggtAaaatcacaattgagatgtaaagtaagggcagaaacacaattgcccctaataattatatatctccattgatttcaattggatgtattaagtttatttataatctccaattctaaattttaactggcagagaattatttggagaagtgggtgatattaaattatttggaccattcttagctagacattatgcaatatattggagggctataaaaatattagttttgcattgggactctaagatctaacatgttatgAaatctctttaggatataaatctatcgacatatttattttatatcctaaattaatttactaattaagtattggtgaaaataatAaacaccttgtaaaataaatggagtgagtacatgaaaacaaaacatatgcatatttgactttgaggcctatggttttgtatgtgactttaggtaaattgtatttcttttgacatgaattctgtaggagatgtttggtgccggaagtgagacatcagcgaatacgctccaatggttgatgtccgagctcatactaaatccaagagtgatgtcgaaggcacaagttgaattaagtgacacccttcgaggtAaacaaactgtgacagaagatgacttggctggattgaaatacttgaagcttattatcaaggagaacttgcggttgcatccagtggtgccgctgcttctCccgagagaatgccagaagacatgtaaggttatgatgtacgatgttcccgttggtaccactgtgctcgtgaatgtgtggtcaattaatagagatccaaagtattgggaggaccctgaaacattcaaacctgagcgatttgaagatggtcatatagatttcaaaggaacagattttgagttcataccatttggagcagggcgaagaatgtgcccaggcataacatttgcagaagcaatcatggaactcgctctcgcctcactactctatcattttgactggaagctcctcggcaatggcatttcgtcaaccaagttggacatgacagaggagctaggtgctaccgttcgaagaaagaatgacctctaccttgttccaaccattcgcgtgccTttaccggctgactcataactgttcagatatagcatccctctagctacatgtatgagaataagctagaagcctagaatgattgatgctacttgtacccttaaagtatgttttctttcctaaaATtatagtgtagatatattctggttgtatttgtggctttactgatttcaagttatacTATtatatatacttcctccgtcgtaaaataaaccaacttttatatatgaatctgaatatagcctatgtcagaTttatacacaaaaaatggtttattttcaaacagatggagtacatgttagttacttcctccgtcccaaaatgaagccatttttgaggttggcacgggtattaagaaagtaggtaagaatgattggaagaagtatgtaattggttgaaaagagaaagtaggtgaagaagaatggttgtgattggttgagaggaggaggtaggtgaagaaatagcttcattttgggacaagacactgtgctagaaatagctacattttggggcggagggagtaatgattaacaactgcaaagtcgattgggtcgtgtatcgcaaaaaataattaatattggtttttttattaatagacttcaataattgtaatctccttttgttagtttggattctttatttttgttacggtgtgttctatttaattagatctatgcttctttgtaataattgtctatagctctgtttgagtaaataccgggataatatattccattatctaaaaaaattggtttttttatcactcggctctcggctgtcacctcctctgctcataccagctatcactgggtattctcagtttctcatgcatctgcatgcagagccggaacatctaagctgtcacctcttgcgctgggaattggcacgcacactgctgccgctctgacgacgcgacgctcgttgccggcaatggcgatgatgagtgaggctgcccggccgcgtcgtcgcctctcctctcaaccgccgacgacgccacgagcggatcagcgtacgcaccgtatgtgctcgtcatcgacggagaccggagatttggggcatcgatgtcgtcaaaacagaatcaccagaatactaaggatcaccacggtatccttacggccttgttcggttacacaaggattcgttccgggtcgggaatgacaagtatagtaacaaatttatgctagatacaacgagagatcaagatcgagagatcgagatttattccccactgggaaccaatttacttatgatatgaacaataagagaccggtaatcaattcactagtcaagaagtgtggaactaatccagatgttttgttgtacctaatataagtaaattggttcccgacccaaaataaatcctggtctcttgttgtacctattataaatttcttgttatacatatcattctcgacccgaaacgaatccttgtgtaaccgaacaaggctaccttggtttgtccggtgccagagaagaagatcatagagggcagagcagaagagctcgggatgtggaacttgtcgaggcgcgcatccgctcgggcgcgccggtcgtcggcggccgcagcttgcggaagagaaggagcgggccggacgaactaggcatgatacgttgtttggtggcccatgatccagCcccccccctcccccttaaggatcaaagagaatattttggggaatcaattttatctttaattgttcggttgatctctctcgaaacagggaaatttaaatgggcttattcaagatactatttttttctcctcatgattcaatcatcaaattttaactagaaaaaaatgcccgtgcgttgcaacgggaagaaaatttgagaaaattaagaaaaagttgagaaagttttacattatgtaattaattaaaatacaaatttcaccatcttccttatataaagaaactatgtgtgtgtgtctgtaattgcaatttcatccccgctacatatgaaaatcgcaattacacacatatacgatgttgaagaaaaaaaagacccataaaaatcaaggtgaattctaaacagacctggatatatgttaggtctggtgatattgtaggtcgtactatcttgttttggagtggcttgataaagcagtcgtggatgggacgttgggactggctcgttttgtcgtgagaccgtcacggatggaaacacagaaacatgcggtcaacagacggacgccgaatcgggaacacacggatgaactattggagttgcatgtaatgttgcgtcctagttgcacatcccctctaaagagaagatgacatcattgagttcatagatctcgggaacatgtttttatcaagtcattttcattgaattgatctcattgacctctgttttgatgtgcagcgataacataaatttaaatgatgcatgattcttttgggggataggacatacgtatatatcatcctaatccaaattaagaatgggatggattgtccttcctgatttttttaagggatttataaatcatttaataaattattcctataatttatactaaagtttaattaattttatggtgaagtaaatgtgagaaataaaattttctaaataaaatatggctggatttaacttttattaaattaaaaataattaattatactatctgaaatttttcagaatcttcagagctcaattgataattttaataatacaaccatcatttcagcatttatttaaatagaattctaaataaaaacccttctttctctctgggccaTtttttagtccatttcttccctcatcccccagccgagccggcccgttttctttccttctcctcccctccgcctatagcctgcaagcgcatcaagcccatcaaacaacaaaaagtctaaaagttttccctcttctcctccttcactgtcgcgtgggtcctgcagctacatggtcatcatctacctccggccggacacccgcagcttcccgacactgtgtgcaatcgtttcctccgtgaaatccggtaacatagataatccaaaattaattgagaggtttggattcttatctcatcctctttctgttttctcaagaatcagagcaaaacctcaccatatcatgctcggaatcgaaccctatcctaaccctaaagtttctcatctcagagtcggtttcgctagagtttcccatcgcgcatacacgactacgacggacgaaaatcgtcacagaatccttacgtattttttaattaggtatagatatagatatagatttgaattggaccaatatattttttcgcattggaatcaaatgagattttcttttcacattggacgcggtgccgaactagaTtttttttatggacgacataagtgtcttcgtctttctaaactgtagagatagagatagagaaaacatcgtgtgactcggttcgcataggacaaggaagttgttatactatgttatatctatttgcacctatcgtacgtattattttgtttgttttcaaatgtaatgtactcattaattaaaaaaaattgatgaaacttctctatatataccattccttgctagttctctttggaattaagatttttaagtgctggacacgccttacataccgacctagacgctatggccatggtgcaagatgccacgggctacttgagccttttcttggctctcctctcgatcactctcgtgctccacaaggtggcgaggaaggcgagcggcgatggcgccggcaagccgaggcttccgccggggccatggcggctgccggtcatcggcaacctccaccagatcgcgatgggcggcccgctcgtgcaccgcaccatggccgacctggcgcgccggcacgacgcgccgctcatgtcgctcaggctcggcgaggtccccgtcgtcgtcgcgtcgtccgccgacgccgccagggagatcaccaagacgcacgacgttgcgttcgcgacgcggccgtggagctccaccgtccgtgtcctgatgagcgacggggtcgggctggtgttcgcgccctacggcgctctgtggcggcagctccgcaagatcgccatggtggagctgctcagcgcccgccgcgtccagtcgttccgcggcatacgggaggacgaggtcggccgcctcgtcgccgccgtcgccgccgcctcggcggcgcagcccggcgaggccgtgaacgtcagcgagcgcatcgccgtgctcatcgccgactcggtggtgcgcgcgctcatgggcgacaggttcgacaggcgggacgaattcctggatcagctcgccgagagggttaagatcacctccgggttcagcctcggcgacctgttcccgtcgtcgaggctggccagcttcatcggcggcacgacgcgccgcgcggaggcgaaccaccgcaagaacttcgagctgatagaatgcgctctgaggcagcacgaggagcggagggcggcgcgcgccggcgccgctgccgccggagctgtggacgacgatgaggacctcgtcgatgtgcttcttaggattcagaaggaagggaagctcgaagtgcccctcaccatgggcaacatcaatgccgtgatctatgtgagtagccatatatattcctttgtatatatttttctttcaaattcgatgcaaaattctaaaaaaaaatgttccccactctttctgctgtggaagttaatagtatcagtatcaccctcgattttcgtatgatgtatattaatgttaaaaatagtaaatttcagccattgattcgttgcaaaataatagtctctggcttaaagaattgagttgtgggcttttagctggtcaccacggttaatacttttaaattagtagttagtcgtttaaattacttttagtttatatatttttatttagtccttctgtagtcccctgacagcctctgatagaaagtgaatcggaactaaagatgatcaccaaccgaaactaaagatcatatagtcccgctgcgattcccggttcctactcgaacaaggactaatatcatttttgtttgacccacgaaagatcagttctccagcagtgttgttaatctttaaaatacttgtacatatacaagacatatatgtgtaattgtgcctaatttcaatacacggtttcatagaggcaagaatttttttatgcattatgtaggacctttttggtgccgggagcgagacttcagcgaatacactccaatgggtaatgtctgagctcatattgaacccaagggtgatgctgaagttacaagccgaattacgtggcatccttcaagggaagcaaagagttacagaagatgacttggttgaattgaaatatttgaagcttgtaattaaagaaaccttgcggttgcatcccgtggttccactacttctcgcgagagaatgccaggatacatgtaagattatgggatacgatatccccgtcggtactacagttttcgtgaacgtgtgggtaatatgcagagaatcaaagtattggaaagatgccgagacatttagaccagagcgatttgagaatgtttgtgttgacttcaaaggaacgcactttgaatacataccatttggagcaggtcgaagaatgtgccctggtgtagcatttgcagaagcaagcatggagcttgttctagcctcgctcctctatcactttgattggaagctacccaatgacatcttgccaactaaactggatatgacagaagaaatgggtcttagcattagaagaaaaaatgatctttatcttatcccaactatttgtgtgcctcctctggcagcctag
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| CDS seq | atggccatggcgcaagatgtcaccggctacctctgcctcttcgtggctctcctcgtgttgctcaaggtggtgaggaaggcgagcggcaatggcgcggccggacggctgaggctcccgccggggccgtggcggctgccggtcatcggcaacctccaccaggtcgcgatgggcgggccgctcgtccaccgcaccatggccgacatggcgcgccggctcgacgcgccgctcatgtcgctcaggctcggcgagatccccgtcgtcgtcgcgtcgtccgccgacgccgccagggagatcaccaagacgcacgacgtcgcgttcgcgacgcggccgctgagctccaccatCcgggtgatggtgtccgacggggagggcctcgtgttcacgccctacggcgcgctgtggcggcggctccgcaaggtcgccatgctcgagctcctcagcgcccgccgcgtccagtcgttccgccgcgtccgggaggaggaggtcggccgcctcgtcgccgccgtcgccgccgcggccgcggcgcggccgggagaggccgtgaacctcagccagctgatcgcggagctcatctccgacacggcggcgcgcacgatcatcggcgacaggttcgagaagcggcaagaattgctggaagggctcaccgaggggatcaggatatcatctgggttcagcctcggcgacctgttcccgtcgtcgaggctggcgaacctcatcggcggcacgacgcggcgagcggaggcgaaccaccgcaagaacctggcgctgatagagtgcgctctcaggcagcacgaggagcggagggccgccggagacgaggaagacgacgaggacctcgtcgatgtgcttctcagggttcagaaggaagggggcggcgaagtgcctctcaccatgggcaacgtcaaagtcgtcatccgtgagatgtttggtgccggaagtgagacatcagcgaatacgctccaatggttgatgtccgagctcatactaaatccaagagtgatgtcgaaggcacaagttgaattaagtgacacccttcgaggtAaacaaactgtgacagaagatgacttggctggattgaaatacttgaagcttattatcaaggagaacttgcggttgcatccagtggtgccgctgcttctCccgagagaatgccagaagacatgtaaggttatgatgtacgatgttcccgttggtaccactgtgctcgtgaatgtgtggtcaattaatagagatccaaagtattgggaggaccctgaaacattcaaacctgagcgatttgaagatggtcatatagatttcaaaggaacagattttgagttcataccatttggagcagggcgaagaatgtgcccaggcataacatttgcagaagcaatcatggaactcgctctcgcctcactactctatcattttgactggaagctcctcggcaatggcatttcgtcaaccaagttggacatgacagaggagctagacgctatggccatggtgcaagatgccacgggctacttgagccttttcttggctctcctctcgatcactctcgtgctccacaaggtggcgaggaaggcgagcggcgatggcgccggcaagccgaggcttccgccggggccatggcggctgccggtcatcggcaacctccaccagatcgcgatgggcggcccgctcgtgcaccgcaccatggccgacctggcgcgccggcacgacgcgccgctcatgtcgctcaggctcggcgaggtccccgtcgtcgtcgcgtcgtccgccgacgccgccagggagatcaccaagacgcacgacgttgcgttcgcgacgcggccgtggagctccaccgtccgtgtcctgatgagcgacggggtcgggctggtgttcgcgccctacggcgctctgtggcggcagctccgcaagatcgccatggtggagctgctcagcgcccgccgcgtccagtcgttccgcggcatacgggaggacgaggtcggccgcctcgtcgccgccgtcgccgccgcctcggcggcgcagcccggcgaggccgtgaacgtcagcgagcgcatcgccgtgctcatcgccgactcggtggtgcgcgcgctcatgggcgacaggttcgacaggcgggacgaattcctggatcagctcgccgagagggttaagatcacctccgggttcagcctcggcgacctgttcccgtcgtcgaggctggccagcttcatcggcggcacgacgcgccgcgcggaggcgaaccaccgcaagaacttcgagctgatagaatgcgctctgaggcagcacgaggagcggagggcggcgcgcgccggcgccgctgccgccggagctgtggacgacgatgaggacctcgtcgatgacctttttggtgccgggagcgagacttcagcgaatacactccaatgggtaatgtctgagctcatattgaacccaagggtgatgctgaagttacaagccgaattacgtggcatccttcaagggaagcaaagagttacagaagatgacttggttgaattgaaatatttgaagcttgtaattaaagaaaccttgcggttgcatcccgtggttccactacttctcgcgagagaatgccaggatacatgtaagattatgggatacgatatccccgtcggtactacagttttcgtgaacgtgtgggtaatatgcagagaatcaaagtattggaaagatgccgagacatttagaccagagcgatttgagaatgtttgtgttgacttcaaaggaacgcactttgaatacataccatttggagcaggtcgaagaatgtgccctggtgtagcatttgcagaagcaagcatggagcttgttctagcctcgctcctctatcactttgattggaagctacccaatgacatcttgccaactaaactggatatgacagaagaaatgggtcttagcattagaagaaaaaatgatctttatcttatcccaactatttgtgtgcctcctctggcagcctag
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| Protein seq | MAMAQDVTGYLCLFVALLVLLKVVRKASGNGAAGRLRLPPGPWRLPVIGNLHQVAMGGPLVHRTMADMARRLDAPLMSLRLGEIPVVVASSADAAREITKTHDVAFATRPLSSTIRVMVSDGEGLVFTPYGALWRRLRKVAMLELLSARRVQSFRRVREEEVGRLVAAVAAAAAARPGEAVNLSQLIAELISDTAARTIIGDRFEKRQELLEGLTEGIRISSGFSLGDLFPSSRLANLIGGTTRRAEANHRKNLALIECALRQHEERRAAGDEEDDEDLVDVLLRVQKEGGGEVPLTMGNVKVVIREMFGAGSETSANTLQWLMSELILNPRVMSKAQVELSDTLRGKQTVTEDDLAGLKYLKLIIKENLRLHPVVPLLLPRECQKTCKVMMYDVPVGTTVLVNVWSINRDPKYWEDPETFKPERFEDGHIDFKGTDFEFIPFGAGRRMCPGITFAEAIMELALASLLYHFDWKLLGNGISSTKLDMTEELDAMAMVQDATGYLSLFLALLSITLVLHKVARKASGDGAGKPRLPPGPWRLPVIGNLHQIAMGGPLVHRTMADLARRHDAPLMSLRLGEVPVVVASSADAAREITKTHDVAFATRPWSSTVRVLMSDGVGLVFAPYGALWRQLRKIAMVELLSARRVQSFRGIREDEVGRLVAAVAAASAAQPGEAVNVSERIAVLIADSVVRALMGDRFDRRDEFLDQLAERVKITSGFSLGDLFPSSRLASFIGGTTRRAEANHRKNFELIECALRQHEERRAARAGAAAAGAVDDDEDLVDDLFGAGSETSANTLQWVMSELILNPRVMLKLQAELRGILQGKQRVTEDDLVELKYLKLVIKETLRLHPVVPLLLARECQDTCKIMGYDIPVGTTVFVNVWVICRESKYWKDAETFRPERFENVCVDFKGTHFEYIPFGAGRRMCPGVAFAEASMELVLASLLYHFDWKLPNDILPTKLDMTEEMGLSIRRKNDLYLIPTICVPPLAA |
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| Function | Dolabradiene monooxygenase [UniProtKB/Swiss-Prot:A0A1D6GQ67] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_02g0006600 | OsLiXu_02g0006600.01 | Chr02 | 4898031 | 4908108 | + | NAM | ||
| CDS seq | atggccatggcgcaagatgtcaccggctacctctgcctcttcgtggctctcctcgtgttgctcaaggtggtgaggaaggcgagcggcaatggcgcggccggacggctgaggctcccgccggggccgtggcggctgccggtcatcggcaacctccaccaggtcgcgatgggcgggccgctcgtccaccgcaccatggccgacatggcgcgccggctcgacgcgccgctcatgtcgctcaggctcggcgagatccccgtcgtcgtcgcgtcgtccgccgacgccgccagggagatcaccaagacgcacgacgtcgcgttcgcgacgcggccgctgagctccaccatCcgggtgatggtgtccgacggggagggcctcgtgttcacgccctacggcgcgctgtggcggcggctccgcaaggtcgccatgctcgagctcctcagcgcccgccgcgtccagtcgttccgccgcgtccgggaggaggaggtcggccgcctcgtcgccgccgtcgccgccgcggccgcggcgcggccgggagaggccgtgaacctcagccagctgatcgcggagctcatctccgacacggcggcgcgcacgatcatcggcgacaggttcgagaagcggcaagaattgctggaagggctcaccgaggggatcaggatatcatctgggttcagcctcggcgacctgttcccgtcgtcgaggctggcgaacctcatcggcggcacgacgcggcgagcggaggcgaaccaccgcaagaacctggcgctgatagagtgcgctctcaggcagcacgaggagcggagggccgccggagacgaggaagacgacgaggacctcgtcgatgtgcttctcagggttcagaaggaagggggcggcgaagtgcctctcaccatgggcaacgtcaaagtcgtcatccgtgagatgtttggtgccggaagtgagacatcagcgaatacgctccaatggttgatgtccgagctcatactaaatccaagagtgatgtcgaaggcacaagttgaattaagtgacacccttcgaggtAaacaaactgtgacagaagatgacttggctggattgaaatacttgaagcttattatcaaggagaacttgcggttgcatccagtggtgccgctgcttctCccgagagaatgccagaagacatgtaaggttatgatgtacgatgttcccgttggtaccactgtgctcgtgaatgtgtggtcaattaatagagatccaaagtattgggaggaccctgaaacattcaaacctgagcgatttgaagatggtcatatagatttcaaaggaacagattttgagttcataccatttggagcagggcgaagaatgtgcccaggcataacatttgcagaagcaatcatggaactcgctctcgcctcactactctatcattttgactggaagctcctcggcaatggcatttcgtcaaccaagttggacatgacagaggagctagacgctatggccatggtgcaagatgccacgggctacttgagccttttcttggctctcctctcgatcactctcgtgctccacaaggtggcgaggaaggcgagcggcgatggcgccggcaagccgaggcttccgccggggccatggcggctgccggtcatcggcaacctccaccagatcgcgatgggcggcccgctcgtgcaccgcaccatggccgacctggcgcgccggcacgacgcgccgctcatgtcgctcaggctcggcgaggtccccgtcgtcgtcgcgtcgtccgccgacgccgccagggagatcaccaagacgcacgacgttgcgttcgcgacgcggccgtggagctccaccgtccgtgtcctgatgagcgacggggtcgggctggtgttcgcgccctacggcgctctgtggcggcagctccgcaagatcgccatggtggagctgctcagcgcccgccgcgtccagtcgttccgcggcatacgggaggacgaggtcggccgcctcgtcgccgccgtcgccgccgcctcggcggcgcagcccggcgaggccgtgaacgtcagcgagcgcatcgccgtgctcatcgccgactcggtggtgcgcgcgctcatgggcgacaggttcgacaggcgggacgaattcctggatcagctcgccgagagggttaagatcacctccgggttcagcctcggcgacctgttcccgtcgtcgaggctggccagcttcatcggcggcacgacgcgccgcgcggaggcgaaccaccgcaagaacttcgagctgatagaatgcgctctgaggcagcacgaggagcggagggcggcgcgcgccggcgccgctgccgccggagctgtggacgacgatgaggacctcgtcgatgacctttttggtgccgggagcgagacttcagcgaatacactccaatgggtaatgtctgagctcatattgaacccaagggtgatgctgaagttacaagccgaattacgtggcatccttcaagggaagcaaagagttacagaagatgacttggttgaattgaaatatttgaagcttgtaattaaagaaaccttgcggttgcatcccgtggttccactacttctcgcgagagaatgccaggatacatgtaagattatgggatacgatatccccgtcggtactacagttttcgtgaacgtgtgggtaatatgcagagaatcaaagtattggaaagatgccgagacatttagaccagagcgatttgagaatgtttgtgttgacttcaaaggaacgcactttgaatacataccatttggagcaggtcgaagaatgtgccctggtgtagcatttgcagaagcaagcatggagcttgttctagcctcgctcctctatcactttgattggaagctacccaatgacatcttgccaactaaactggatatgacagaagaaatgggtcttagcattagaagaaaaaatgatctttatcttatcccaactatttgtgtgcctcctctggcagcctag
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| Protein seq | MAMAQDVTGYLCLFVALLVLLKVVRKASGNGAAGRLRLPPGPWRLPVIGNLHQVAMGGPLVHRTMADMARRLDAPLMSLRLGEIPVVVASSADAAREITKTHDVAFATRPLSSTIRVMVSDGEGLVFTPYGALWRRLRKVAMLELLSARRVQSFRRVREEEVGRLVAAVAAAAAARPGEAVNLSQLIAELISDTAARTIIGDRFEKRQELLEGLTEGIRISSGFSLGDLFPSSRLANLIGGTTRRAEANHRKNLALIECALRQHEERRAAGDEEDDEDLVDVLLRVQKEGGGEVPLTMGNVKVVIREMFGAGSETSANTLQWLMSELILNPRVMSKAQVELSDTLRGKQTVTEDDLAGLKYLKLIIKENLRLHPVVPLLLPRECQKTCKVMMYDVPVGTTVLVNVWSINRDPKYWEDPETFKPERFEDGHIDFKGTDFEFIPFGAGRRMCPGITFAEAIMELALASLLYHFDWKLLGNGISSTKLDMTEELDAMAMVQDATGYLSLFLALLSITLVLHKVARKASGDGAGKPRLPPGPWRLPVIGNLHQIAMGGPLVHRTMADLARRHDAPLMSLRLGEVPVVVASSADAAREITKTHDVAFATRPWSSTVRVLMSDGVGLVFAPYGALWRQLRKIAMVELLSARRVQSFRGIREDEVGRLVAAVAAASAAQPGEAVNVSERIAVLIADSVVRALMGDRFDRRDEFLDQLAERVKITSGFSLGDLFPSSRLASFIGGTTRRAEANHRKNFELIECALRQHEERRAARAGAAAAGAVDDDEDLVDDLFGAGSETSANTLQWVMSELILNPRVMLKLQAELRGILQGKQRVTEDDLVELKYLKLVIKETLRLHPVVPLLLARECQDTCKIMGYDIPVGTTVFVNVWVICRESKYWKDAETFRPERFENVCVDFKGTHFEYIPFGAGRRMCPGVAFAEASMELVLASLLYHFDWKLPNDILPTKLDMTEEMGLSIRRKNDLYLIPTICVPPLAA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_02g0006600 | OsLiXu_02g0006600.02 | Chr02 | 4898904 | 4899124 | + | IsoSeq | ||
| CDS seq | ggcgaagtgcctctcaccatgggcaacgtcaaagtcgtcatccgtgtaagtagccttttgttttgt |
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| Protein seq | GEVPLTMGNVKVVIRVSSLLFC |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.058422 | 2.692011 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0184900 | RBH | 0.000000 | 0.444793 | 1.521383 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g09240 | SBH | 0.474128 | 0.199998 | 1.284716 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0184900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0006500 | SBH | 0.048737 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0006620 | RBH | 0.0 | 9.248707 | 0.934067 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0006410 | SBH | 3.118030 | 34.317612 | 0.731600 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0006340 | SBH | 0.531868 | 0.742172 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0006420 | RBH | 1.352356 | 4.581595 | 5.586592 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0080900 | SBH | 0.291971 | 9.780597 | 0.011101 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0006370 | RBH | 0.000000 | 0.095334 | 0.684129 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0083400 | RBH | 0.260263 | 3.9379715 | 0.036648 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0006760 | SBH | 0.141070 | 0.080576 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0006340 | RBH | 0.000000 | 12.116674 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0006630 | RBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0024120 | SBH | 0.0 | 0.141510 | 0.813795 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0006390 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G006530 | SBH | 0.038728 | 0.338339 | 0.781826 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0006470 | RBH | 5.127800 | 35.923454 | 1.488500 |
