Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsLaMu_02g0006400 | OGI:02014330 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr02:4619331-4656766 | ||||||||
Gene Symbol | CYP71D8L, OsCYP71D8L, OsEnS-27, OsEnS-28 | ||||||||||
DNA seq | atggccatggtgcaagacatcaccggctacctgtgcctctccttggctctcctcttgctcactctcgtcctccacaaggtggcgaggaaggcgaccggtaatggcgccggcaagccgaggcttccgccggggccgtggcggctgccggtcatcggcaacctccaccaggtcgcgatgggcggcccgctcgtccaccgcaccatggccgacctggcgcgccggctggaCGcgccgctcatgtcgctcaggctcggcgagctccgcgtcgtcgtcgcctcatccgccaacgccgccagggagatcaccaagacgcacgacgtcgcgttcgcgacgcggccgtggagctccaccatccgcgtcctgatgagcgacggcgttgggctggtgttcgcgccctacggcgcgctgtggcggcagctccgcaagatcgccgtggtggagctcctcagcgcgcgccgcgtccagtcgttccgccgcatccgggaggacgaggtcggccgcctcgtcgccgccgtcgccgccgccccggcggcgcagcccgtgaacgtcagcgagcggatcgcggcgctcatctccgactcggcggtgcgcaccatcatcggcgaccggttcgagaggcgggacgagttcctggagggtctcgccgaggcgatcaagatcacctccgggttcagcctcggcgacctgttcccgtcgtcgaggctggccagcttcgtcggcggcacgacgcggcgggcggaggcgaaccaccgcaagaacttcgagctgatagagtgcgctctgaggcagcacgaggagcggagggccgccggcgccgtggacgacgacgaggacctcgtcgatgtgcttctcagggttcagaaggatgggagcctccagatgcctctcaccatgggcaatatcaaagccgtcgtcctggtaagtagacaagtacttgctgattaatactgtactaatctcccttaattgcacacgaatacttctgagcttagagtagtatttatcttaccaataattaatttttcaatcgtatctacaatcgtaccctaacgtacgttctcttccctaatttagtgaaggttcaatcacactttctggatcTAtaatccattatattcgtgaaaggatgaaatataagacatattttaccaaacctcttttacctgagtgcacttaaaatttgactactgttaatgtcaaaatctacaaagttttaccgtttaagAataaaattaaataactttaactgatgaatggagcgagtatatatgaaaataaaaaaaaagtatgcacactgaacaaaggaaggaagtaattgataacatatttttttacatatatgggaaatcatgttttttttcatgcatataggaacTttttggtgctgggagcgagacatcagcTAAtacacttcaatgggcgatgactgagctcataatgaatccaagagtgatgctgaaggcacaagctgagttaagtaacgtcatcaaaggaaagcaaacgatatctgaagatgacttagttgaattgaagtacttaaaacttattatcaaagagaccttaaggttacatcctgtagtgccactacttctccctagggaatgtcgggagacatgtgaggtcatgggttacgatatcctcataggtactattgtgcttgttaacgtatgggcaataggtagagatcctaagtattgggaggatgctgagacattcatacctgaacgatttgaggatggccatatagacttcaaaggaacaaactttgaatttataccgtttggagctggacgaaggatgtgccctggcatggtatttgcagaagtaatcatggagctcgctctagcctcattgctttaccactttgattgggagctccctgatggcatctcgccaaccaaggtggacatgatggaggagttgggtgctacaattcgaagaaagaacgatctttaccttattcctgctgtccgtgtgcctttgtcaactgtcttatagttgTTTacacttacaaatagtatgtttgtctcgtataaatagtatgtttgtctcgtatgtacgtgtctaaatgataagctatgtaacttttgatgatgtgtactcctacttcctatcctacctattataaattattatttaagtttaattctcaaattattcaatttatttttataatcaagtagaaaactcatgacaataattccatgaataatctgcttttcaattttgatcgatgactgtcacctcattacacatatatgtacttgcatgcacaatatctggtgtagactctgcgacgccataaccatgaacaatacgtaggagggaggataatagtcgtgcctcctattgctgacagtgactctgctaacacaatgacgttgtgtgaagagaagaggagaagaggcgtgctggtctgctggagcctggaagtaggaagggaaaaggagggggatggaaagaggagaaaggaggctcacgattcagcgaattataaacttataatggaattgatttgatcagttttaagaaattttcgaaacgtggaattcggaattcttgctctggtcgatgttgtagtgtgcttgactcagttctgaaccatgccagttagcagttttaactccccagaacttctcgtttcaaacataattaatcaacggaatctgaagtctttttagaagataaatttgcaaaagtccaatatttcaaaccctttttctccttcacgtggaattcaaaagcacatggaagttgcgaagtggaatcagtcgatccgaattcaaattctagacttgatatgttcacatttacgactaattcatctttcagtgtataatatactcgtcgatagtgtgacatcaatgacgacttcatcaatctaaaggtatattccgttttagattaTaagatgTTttgattttggtcaaaatcaaactgtttaaagtttgaccaagtttatagaaaaaatagaaatattttcaactcaagatttaatattgtaatatttacattaccaaattagttttattaaattaataattaaatataTttttataataaatttatttttagttaaaaatatttctgtttttctataaatttagtgaaatttgaagttataacctaaaacagggagtaccggtaagtattttgaaggtgcttataaaataaaaataaagtacgcgcgtgcatttatactaacgagtgtgcgagtacatggatttgtatttttgtcttttaaaaataagcacgtggaagctagacgcagtgctggtctctctccgactctccccacgtgggccaggccccacctgtgtcggtgtgttactagctagtgattgattcgatgaaaagcggtgatcaataaatacttatattgtctttgagattagtcggcaaagaagtgtctgcaaatcttgcagtttaagaacggacagcattacatcatcatctgaacattattgttgcgcttgcactaaatcatacagttaaagtgtaccacctcttttttttttataattgacgtgttttgaacgtatgacacatgcatgctctataaaaagaacatgagaggtcctatttaaagttagtattcgatcttttcattctcaaaacaccctcttgatccgcttgaaaattcttttgaaaaagagttcttccacgccttagaaaaaaaaagcttgttcggttaattcttatgtgaaggccggaaggaatgttggagattaagtaatcctctctaaatccttcttaactttttatgaaggaattaatcgagaagggcattaattttatatatctatatggttcattctcactaagtgcaactagtgcTAAttttctcttttcacagcttgccacatcacttcaaattaatctagccattagatctaaaattgatgtccaagatgtttactttctagcgtgcagcaagaatgtctttttaagtccaaattttcttgggccatgtcactctaccggttcctgcatgtttacatgcatgccaagccattctacctttattattagccataccattattattggcccactatctttcggtggactgctcatcttctagaaactgcccagccatacaaccagtcaaccaagctataaattaagcagtggcatagcataggattagccacattcattgatcattcaagatttcagacaattgtgagaaatttcatctcacatctattgtcgagactcaatgtcagttctccggtttcatacacccaagcaatttaagattgtcaagattttatcatgaaattccgggctgttcatattgatgctattttcaaccatattattttttttagcaacgttatcaaaaaaaaaagtgtctacgtttagcttattgccaaactttggcaagttgataatattgctaaaattttggtaaggtttattttagctacaatctaaatatgtccttcatacacccaagcaattcgagactcatgaaatttctcacaatcgtttgtaacattcaagatttcaaacacccaagcaatttatctcacatcgattgtcaaggctcatggcagttctccaattttatctcacatcgattgtcaggctcatggcagttccccggttttatcctcaatcagtttggttctatatgacaatcggtcatctcttctcctaatctcctggagctgatctaatcatgggtgttatctaatctttccatcatgagacaggtattttgtttttcatcgccatagctttgttttggtatctaatggtgcattaaaatatttacattatatcatcctcTGttttttaagcttgcttatcagcttagttattaaataatatttgtactagtgctaagtaaatcTtttatcttaacatttattgacggacaatcgctaacatggaagtactaccttagtatagtccaacataacggcagaaaaaaggaagcatggttcactgcttcacccttttcactctgtattgaagattcttcttttaga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gcaactcaagcattactgctctctccttttgttcatttttttcttctttagatatatgaagtaagcaatttgtatgtttttctctctgtttgattaattgagatggagatatatatagcatccatttgtggcacattacatgggattgagaattagattttcgagcggtactatgtttacagttcaattcccccacatgaaaacgagatatttcaaattccccaaattatgagatgtaaatacatggcctcaaaagcagcaagaaaacacaaggataagtacagtgtccgggccgttgcaaaaatcttagcctcttatgatatctgccgttgccatctcaattcagtgggcaccgctcgcggcgccaccgcatgacgagacaacgcggtttccgtggcgtgtagcagcaGgcagcagcagcagccaGcctcgagctcatctggaatggcgccccgcgccaagacggcgccgccgtgcgccgtgcatcgatcttgcagatgaaacggctctctttgtcatctcatctccatcgcctcgtaTatatctgttccctagcctagctagctagctatcctgcattgcattgcactcgcgttcgcgtacttacgttgtcgtcgtcgatcatctgatcaccatgtacgacgccgtcgcctgcgtcgtcgccgtcgtcgtcgtcgtcatcttcgccatgcttcgggtgaagctggcgaggagtggtgatggtggtggtggtGgtggtggtggcgtgaggctgccgcctgggccgtggcggctgccggtcatcgggagcctgcaccacgtggtgggcgaccggctcctccaccgcgccatggcgcgcatcgcgcgccggctcggcgacgcgccgctcgtgtacctgcagctcggggaGgtccccgtcgtggtggcctcgtcgcccggcgccgcgcgcgaggtcacgcggacgcacgacctcgcgttcgccgaccgggcgctcaacccgaccgcgcggcggctgcggcccggcggcgccGgggtggcgctcgcgccgtacggcgcgctgtggcgtcagctccgcaagatctgcgtcgtcgagctcctcagcgcgcgccgcgtccggtcgttccgccgcgtccGggaggaggaggccggccgcctcgtgggcgcgctcgccgccgccgccgcgtcgcccggcgaggaggcggccgtcaacttcaccgagcggatcgcggaggccgtctcggacgcggcgctgcgcgccatgatcGgggacaggttcgagcggcgcgacgagttcttgcaggagctcaccgagcagatgaagctcctcggcgggttcagcctcgacgacctgttcccgtcgtcgtggctggcgagcgccatcggcggcagggcgcggcgagcggaggcgaacagcaGgaagctctacgagctcatggactgcgccatccggcagcaccagcagcagcgggcggaggccgccgtggtagacggcggcgccggcgtcgaggacgacaagaaccaagacctcatagacgtgctcctgaacatacagaaacaaggggagctcgagacgcctctcaccatggaacaaatcaaagctgttatccttgtaagtaaaattgacacttgtcatattaaaagcaaagtaaaATatatctactctcttcgtcccagagtaacatgttcatattaagtgtactgtaatgtatcatatctcgtatgaggttgatttattttaggacggagagagtatgtgctatcatggtggattAtatttgcttaattagatggtacaactctcaaatctttgtagtAtttttcattcgatcttttaactttttataggatctctttagtggaggtagcgagacatcggcgactacgcttcaatgggcgatgtcggagctaataaagaacccaatggttatgcaaaagacacaagccgagctacgtgacaaacttaggagaaagccaactgtgacagaggatgatttgtctggcttaaagtatgtaaagctcattattaaggagaccctaaggcttcaccctgtggtaccactgcttgtcgcaagagagtgtcgtgaatcatgcaaagtcatggggtatgatgttccaaaaggcaccactgtatttgttaacgtgtgggctatcggcagagacccaaagtactgggatgacgctgaggagtttagaccagaacggtttgaacacagtactgttgacttcaagggcgtggacctcgagttcataccgtttggcgcaggacgaagaatatgtcctggtatggcattcgcagaagcAatcatggaacttctgcttgctgcactgctctaccactttgactgggaactccctaatggaatggtagcgagcgagctggatatgacagaGgagatgggcatcaccgtccggaggaagaatgaccttcacctccgccccatcctccgtgtgttgtaa
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CDS seq | atggctgagctcataatgaatccaagaacaatgctgaaggcacaagcagagttacgtgatgccctccaaggaaagcaaatagtgtcagaatatgacttggttaaattgaagtatttgaaacttattatcaaggagaccttaaggttacatcctgtggtgccactacttctccctagggaatgtcaagagacatgtaaggtcatggactacgatatCcccataggtactattgtgcttgtgaacgtgtgggtaatcggtagagaccctaagtattgggatgacgccaagacatttagactcgagcgatttgaggatggccatgtagattttaaaggaatgaactttgaatatttaccttttggagcagggcgaaggatgtgccctggtgtggcatttgcagaaccaattatggagctcgctctagcctcattgctctatcactttgattgggagttccccgatggcatctcgccggtcaagatggatatgatggaggtgatgggttctaccgtggcgtggtgcgcttgcttcctcttcctggctcttatggtggttaggttgaggacgaagcggcgtggcgacaataatggcggggtgaagttgccgcctgggccgtggcgactgccgctcgtcggcaacctccaccaggtcatggcgcgcggcccgctcgtgcaccgcaccatggccgacctggcgcgccggctcgacgcgccgctcatgtcgctcaggctcggcgaggtccccgtcgtcgtcgcctcgtccgccgacgccgccagggagatcaccaagacgcacgacgtcgcgttcgcgacacggccgtggagcccgaccacgcggcggctgcggtgcgacggcgagggcgtggtgttcgcgacgtacggcgcgctgtggcgccagctccgcaagctgtgcgtcgtcgagctgctcggcgcgcggcgcgtccggtcgttccgccgcgtccgcgaggaggaggcgcgccgcctcgtcgccgccgtcgccgcgtccccgcgcggcgaggccgtgaacgtcagcgagcggatcacggcggtgatcacggacgcgacgatgcgggccatgatcggggacaggttcgggcggcgcgacgagttcctggagctgctcgccgacatcgtcaagatcggctccgggttcagcctcgacgacctgttcccgtcgtggcgtctcgccggcgccatcggcggcatggcgcgccgcgccgaggcgaaccaccggaggacctacgagctgatggacagcgtgttccagcagcacgaacagcggagggttcacgttgctgcgccggctgacggcgccatggacgacgcggaggaggacctcgttgacgtgctcttcaggatacagaaagatggtggcctcgaggtgcctctcaccattggcaacatcaaagcaatcatcctggacctcttcaatgcagggagtgagacatcagcaaatacgctccagtgggttatgtcagagctaatgaggaacccaaaagtgatgagaaaagcacaagcagagttaaggaacaacctacaagggaagacaacggtaaccgaagacgatctcacaaatctaaagtacctgaagcttgtcatcaaggagacgcttaggttacatcccgtgctgcccttacttctcccaagagagtgccaagaagcatgcaatgtcatcgggtacgacgtccccaaatacactaccgtttttataaacgtgtgggcaatcaacagggaccccaaatattgggacatggccgagatgtttaagccagaacgctttgacaatagcatgattgacttcaaaggtacagacttcgagttcgtgccatttggggctggaagaaggatctgtcctggcatagcatttgcacagtccaatatggagcttgtgcttgctacactcctataccactttgactgggagcttcctagtggtatgtcgcctgaagagttagatatgactgaggacatgggactatctgtccgaaggaagaatgatctttacctacatccaacagtttccgccgccatggagcaggtctcgtgcttcgccgccgccgccgccgccgccgtcgtcgtcgtggttctcttgctcgcccgcatgctcctcgcgccgcgcggggagtgggacgggctgaacctgccgcccagcccgccgcggctgccgttcatcggcagcttccacctcctccgccgcagcccgctcgtccaccgcgcgctggccgacgtcgcgcggcagctcggctcgccgccgctcatgtacatgaggatcggcgagctcccggccatcgtcgtgtcgtccgccgacgcggcgcgcgaggtcatgaagacgcacgacatcaagttcgcgtcgcggccgtggccgccgacaatccggaagctgcgcgcgcaggggaagggcatcttcttcgcgccctacggcgcgctgtggcgccagctccgcaagatctgcatcgtcaagctgctcagcgtccgccgcgtcagctcgttccacggcgtccgcgaggaggaggccggccgcctagtcgccgccgtcgccgcgacgccgccgggacaggccgtgaacctgaccgagcggatcgaggtggtcatcgcggacacgacgatgcgccccatgatcggggagaggttcgagaggcgtgaggacttcctcgagctcctcccggaaatcgtcaagatcgcctccgggttcagcctcgacgacctgttcccgtcgtcgtggctcgcctgcgccatcggcggctcgcagcgccgcggcgaggcgagccaccggacatcctacgagctggtggacagcgccttccgccagcggcagcagcaaagggaggccatggccgcgtcgccgcctgacatcgccaaggaggaggaggatgatttgatggatgatctcatcaggatacacaaggaaggtagcctcgaggtgcctcttactgctggcaacttgaaagccgtcatcctagatctctttggtgctggaagcgagacatcctcggatgcgctccaatgggcaatgtcagagctgatgagaaacccaagagtgatggagaaagcacaaaacgaggttcaaagcatcctcaaagggaagccatcggtgaccgaagccgacgtagccaacctaaagtatctgaaaatgattgtcaaggagactcataggctacacccggtgttaccgttgctcatcccaagggagtgccagcaaacttgccagatcatggggtatgatgtgccccaaggtagtgtcataTttataaactcgtgggcgataatgagggaccccaagcattgggatgatgccgagactttcaaaccagagcggtttgaggatggtgagatcgacctcaagggtacaaactatgagttcacaccatttggggctggacgtaggatctgccctagcttggcattagcccaggccagcatagagttcatgctcgccactctgctctaccacttcgactgggagctccctaacggggctgcaccggaggagctggacatgactgaggagatgggcatcaccatccgaaggaagaaggatctctacttgctcccaactctccgtccaccacccGccgccatggagcaggtctcgtgcttcgccgccgccgccgccttcgtcctcgttgttctctcgctcgctcgcatgctcctcgcgccgcgcagggagtgggacgggctgaacctgccgcccagcccgtcgcggctgccgttcatcggcagcttccacctcctccgccgcagcccgctcgtccaccgcgcgctggccgacgtcgtgcggcagctcggcgcgccgccgctcatgtacatggagatcggtgaggtcccggccatcgtcgtgtcgtgcgccgacgcggcgcgcgagatcatgaagacgcacgacatcaacttctcgtcgcggccgtggccgccgaccgtccagaagctgcgcgcgcaggggaagggcatcttcttcgagccctacggcgcgctgtggcgccagctccgcaagatctgcatcgtcaagctgctcagcgtccgccgcgtcagctcgttccacggcgtccgcgaggaggaggccggccgcctcgtcgccgccgtcgccgcgacgccgccgggacaggccgtgaacctcaccgagcggatcaaggtggccatcgcggacaccacgatgcgccccatgatcggtgagaggttcgagaggcgggaggacttcctcgaggtcctcccggagatcgtcaagctcgcctccgggttcagcctcgacgacctgttcccgtcgtcgtggctcgccggcgccatcggcggctcgcggcgccgcggcgaggcggtcaaccgggcgtcctacgagctggtggacagcgccttccgccagcggcagcagcaaaaggaggccatggctgcgccgccgcctgacatcgccaaggaggaggaggatgacttgatggatgagctcatcaggatacacaaggaaggtagcctcgaggtgcctcttactgccggcaacttgaaagctgtcatcctagagctcttttgtgcgggaagtgagacatcctcgaatgcgatccaatgggcaatgtcagagctggtgaggaacccaagagtgatggagaaagcacagaacgaggtgcgaagcatcctcaaagggaagcccacagtgactgaggccgacatggtagacctaacgtatgtgaagatgattgtcaaggagactcatagcctgcatccggtattgccattgctcaccccaagggtgtgctag
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Protein seq | MAELIMNPRTMLKAQAELRDALQGKQIVSEYDLVKLKYLKLIIKETLRLHPVVPLLLPRECQETCKVMDYDIPIGTIVLVNVWVIGRDPKYWDDAKTFRLERFEDGHVDFKGMNFEYLPFGAGRRMCPGVAFAEPIMELALASLLYHFDWEFPDGISPVKMDMMEVMGSTVAWCACFLFLALMVVRLRTKRRGDNNGGVKLPPGPWRLPLVGNLHQVMARGPLVHRTMADLARRLDAPLMSLRLGEVPVVVASSADAAREITKTHDVAFATRPWSPTTRRLRCDGEGVVFATYGALWRQLRKLCVVELLGARRVRSFRRVREEEARRLVAAVAASPRGEAVNVSERITAVITDATMRAMIGDRFGRRDEFLELLADIVKIGSGFSLDDLFPSWRLAGAIGGMARRAEANHRRTYELMDSVFQQHEQRRVHVAAPADGAMDDAEEDLVDVLFRIQKDGGLEVPLTIGNIKAIILDLFNAGSETSANTLQWVMSELMRNPKVMRKAQAELRNNLQGKTTVTEDDLTNLKYLKLVIKETLRLHPVLPLLLPRECQEACNVIGYDVPKYTTVFINVWAINRDPKYWDMAEMFKPERFDNSMIDFKGTDFEFVPFGAGRRICPGIAFAQSNMELVLATLLYHFDWELPSGMSPEELDMTEDMGLSVRRKNDLYLHPTVSAAMEQVSCFAAAAAAAVVVVVLLLARMLLAPRGEWDGLNLPPSPPRLPFIGSFHLLRRSPLVHRALADVARQLGSPPLMYMRIGELPAIVVSSADAAREVMKTHDIKFASRPWPPTIRKLRAQGKGIFFAPYGALWRQLRKICIVKLLSVRRVSSFHGVREEEAGRLVAAVAATPPGQAVNLTERIEVVIADTTMRPMIGERFERREDFLELLPEIVKIASGFSLDDLFPSSWLACAIGGSQRRGEASHRTSYELVDSAFRQRQQQREAMAASPPDIAKEEEDDLMDDLIRIHKEGSLEVPLTAGNLKAVILDLFGAGSETSSDALQWAMSELMRNPRVMEKAQNEVQSILKGKPSVTEADVANLKYLKMIVKETHRLHPVLPLLIPRECQQTCQIMGYDVPQGSVIFINSWAIMRDPKHWDDAETFKPERFEDGEIDLKGTNYEFTPFGAGRRICPSLALAQASIEFMLATLLYHFDWELPNGAAPEELDMTEEMGITIRRKKDLYLLPTLRPPPAAMEQVSCFAAAAAFVLVVLSLARMLLAPRREWDGLNLPPSPSRLPFIGSFHLLRRSPLVHRALADVVRQLGAPPLMYMEIGEVPAIVVSCADAAREIMKTHDINFSSRPWPPTVQKLRAQGKGIFFEPYGALWRQLRKICIVKLLSVRRVSSFHGVREEEAGRLVAAVAATPPGQAVNLTERIKVAIADTTMRPMIGERFERREDFLEVLPEIVKLASGFSLDDLFPSSWLAGAIGGSRRRGEAVNRASYELVDSAFRQRQQQKEAMAAPPPDIAKEEEDDLMDELIRIHKEGSLEVPLTAGNLKAVILELFCAGSETSSNAIQWAMSELVRNPRVMEKAQNEVRSILKGKPTVTEADMVDLTYVKMIVKETHSLHPVLPLLTPRVC |
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Function | Premnaspirodiene oxygenase [UniProtKB/Swiss-Prot:A6YIH8] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLaMu_02g0006400 | OsLaMu_02g0006400.02 | Chr02 | 4635640 | 4652253 | + | NAM | ||
CDS seq | atggctgagctcataatgaatccaagaacaatgctgaaggcacaagcagagttacgtgatgccctccaaggaaagcaaatagtgtcagaatatgacttggttaaattgaagtatttgaaacttattatcaaggagaccttaaggttacatcctgtggtgccactacttctccctagggaatgtcaagagacatgtaaggtcatggactacgatatCcccataggtactattgtgcttgtgaacgtgtgggtaatcggtagagaccctaagtattgggatgacgccaagacatttagactcgagcgatttgaggatggccatgtagattttaaaggaatgaactttgaatatttaccttttggagcagggcgaaggatgtgccctggtgtggcatttgcagaaccaattatggagctcgctctagcctcattgctctatcactttgattgggagttccccgatggcatctcgccggtcaagatggatatgatggaggtgatgggttctaccgtggcgtggtgcgcttgcttcctcttcctggctcttatggtggttaggttgaggacgaagcggcgtggcgacaataatggcggggtgaagttgccgcctgggccgtggcgactgccgctcgtcggcaacctccaccaggtcatggcgcgcggcccgctcgtgcaccgcaccatggccgacctggcgcgccggctcgacgcgccgctcatgtcgctcaggctcggcgaggtccccgtcgtcgtcgcctcgtccgccgacgccgccagggagatcaccaagacgcacgacgtcgcgttcgcgacacggccgtggagcccgaccacgcggcggctgcggtgcgacggcgagggcgtggtgttcgcgacgtacggcgcgctgtggcgccagctccgcaagctgtgcgtcgtcgagctgctcggcgcgcggcgcgtccggtcgttccgccgcgtccgcgaggaggaggcgcgccgcctcgtcgccgccgtcgccgcgtccccgcgcggcgaggccgtgaacgtcagcgagcggatcacggcggtgatcacggacgcgacgatgcgggccatgatcggggacaggttcgggcggcgcgacgagttcctggagctgctcgccgacatcgtcaagatcggctccgggttcagcctcgacgacctgttcccgtcgtggcgtctcgccggcgccatcggcggcatggcgcgccgcgccgaggcgaaccaccggaggacctacgagctgatggacagcgtgttccagcagcacgaacagcggagggttcacgttgctgcgccggctgacggcgccatggacgacgcggaggaggacctcgttgacgtgctcttcaggatacagaaagatggtggcctcgaggtgcctctcaccattggcaacatcaaagcaatcatcctggacctcttcaatgcagggagtgagacatcagcaaatacgctccagtgggttatgtcagagctaatgaggaacccaaaagtgatgagaaaagcacaagcagagttaaggaacaacctacaagggaagacaacggtaaccgaagacgatctcacaaatctaaagtacctgaagcttgtcatcaaggagacgcttaggttacatcccgtgctgcccttacttctcccaagagagtgccaagaagcatgcaatgtcatcgggtacgacgtccccaaatacactaccgtttttataaacgtgtgggcaatcaacagggaccccaaatattgggacatggccgagatgtttaagccagaacgctttgacaatagcatgattgacttcaaaggtacagacttcgagttcgtgccatttggggctggaagaaggatctgtcctggcatagcatttgcacagtccaatatggagcttgtgcttgctacactcctataccactttgactgggagcttcctagtggtatgtcgcctgaagagttagatatgactgaggacatgggactatctgtccgaaggaagaatgatctttacctacatccaacagtttccgccgccatggagcaggtctcgtgcttcgccgccgccgccgccgccgccgtcgtcgtcgtggttctcttgctcgcccgcatgctcctcgcgccgcgcggggagtgggacgggctgaacctgccgcccagcccgccgcggctgccgttcatcggcagcttccacctcctccgccgcagcccgctcgtccaccgcgcgctggccgacgtcgcgcggcagctcggctcgccgccgctcatgtacatgaggatcggcgagctcccggccatcgtcgtgtcgtccgccgacgcggcgcgcgaggtcatgaagacgcacgacatcaagttcgcgtcgcggccgtggccgccgacaatccggaagctgcgcgcgcaggggaagggcatcttcttcgcgccctacggcgcgctgtggcgccagctccgcaagatctgcatcgtcaagctgctcagcgtccgccgcgtcagctcgttccacggcgtccgcgaggaggaggccggccgcctagtcgccgccgtcgccgcgacgccgccgggacaggccgtgaacctgaccgagcggatcgaggtggtcatcgcggacacgacgatgcgccccatgatcggggagaggttcgagaggcgtgaggacttcctcgagctcctcccggaaatcgtcaagatcgcctccgggttcagcctcgacgacctgttcccgtcgtcgtggctcgcctgcgccatcggcggctcgcagcgccgcggcgaggcgagccaccggacatcctacgagctggtggacagcgccttccgccagcggcagcagcaaagggaggccatggccgcgtcgccgcctgacatcgccaaggaggaggaggatgatttgatggatgatctcatcaggatacacaaggaaggtagcctcgaggtgcctcttactgctggcaacttgaaagccgtcatcctagatctctttggtgctggaagcgagacatcctcggatgcgctccaatgggcaatgtcagagctgatgagaaacccaagagtgatggagaaagcacaaaacgaggttcaaagcatcctcaaagggaagccatcggtgaccgaagccgacgtagccaacctaaagtatctgaaaatgattgtcaaggagactcataggctacacccggtgttaccgttgctcatcccaagggagtgccagcaaacttgccagatcatggggtatgatgtgccccaaggtagtgtcataTttataaactcgtgggcgataatgagggaccccaagcattgggatgatgccgagactttcaaaccagagcggtttgaggatggtgagatcgacctcaagggtacaaactatgagttcacaccatttggggctggacgtaggatctgccctagcttggcattagcccaggccagcatagagttcatgctcgccactctgctctaccacttcgactgggagctccctaacggggctgcaccggaggagctggacatgactgaggagatgggcatcaccatccgaaggaagaaggatctctacttgctcccaactctccgtccaccacccGccgccatggagcaggtctcgtgcttcgccgccgccgccgccttcgtcctcgttgttctctcgctcgctcgcatgctcctcgcgccgcgcagggagtgggacgggctgaacctgccgcccagcccgtcgcggctgccgttcatcggcagcttccacctcctccgccgcagcccgctcgtccaccgcgcgctggccgacgtcgtgcggcagctcggcgcgccgccgctcatgtacatggagatcggtgaggtcccggccatcgtcgtgtcgtgcgccgacgcggcgcgcgagatcatgaagacgcacgacatcaacttctcgtcgcggccgtggccgccgaccgtccagaagctgcgcgcgcaggggaagggcatcttcttcgagccctacggcgcgctgtggcgccagctccgcaagatctgcatcgtcaagctgctcagcgtccgccgcgtcagctcgttccacggcgtccgcgaggaggaggccggccgcctcgtcgccgccgtcgccgcgacgccgccgggacaggccgtgaacctcaccgagcggatcaaggtggccatcgcggacaccacgatgcgccccatgatcggtgagaggttcgagaggcgggaggacttcctcgaggtcctcccggagatcgtcaagctcgcctccgggttcagcctcgacgacctgttcccgtcgtcgtggctcgccggcgccatcggcggctcgcggcgccgcggcgaggcggtcaaccgggcgtcctacgagctggtggacagcgccttccgccagcggcagcagcaaaaggaggccatggctgcgccgccgcctgacatcgccaaggaggaggaggatgacttgatggatgagctcatcaggatacacaaggaaggtagcctcgaggtgcctcttactgccggcaacttgaaagctgtcatcctagagctcttttgtgcgggaagtgagacatcctcgaatgcgatccaatgggcaatgtcagagctggtgaggaacccaagagtgatggagaaagcacagaacgaggtgcgaagcatcctcaaagggaagcccacagtgactgaggccgacatggtagacctaacgtatgtgaagatgattgtcaaggagactcatagcctgcatccggtattgccattgctcaccccaagggtgtgctag
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Protein seq | MAELIMNPRTMLKAQAELRDALQGKQIVSEYDLVKLKYLKLIIKETLRLHPVVPLLLPRECQETCKVMDYDIPIGTIVLVNVWVIGRDPKYWDDAKTFRLERFEDGHVDFKGMNFEYLPFGAGRRMCPGVAFAEPIMELALASLLYHFDWEFPDGISPVKMDMMEVMGSTVAWCACFLFLALMVVRLRTKRRGDNNGGVKLPPGPWRLPLVGNLHQVMARGPLVHRTMADLARRLDAPLMSLRLGEVPVVVASSADAAREITKTHDVAFATRPWSPTTRRLRCDGEGVVFATYGALWRQLRKLCVVELLGARRVRSFRRVREEEARRLVAAVAASPRGEAVNVSERITAVITDATMRAMIGDRFGRRDEFLELLADIVKIGSGFSLDDLFPSWRLAGAIGGMARRAEANHRRTYELMDSVFQQHEQRRVHVAAPADGAMDDAEEDLVDVLFRIQKDGGLEVPLTIGNIKAIILDLFNAGSETSANTLQWVMSELMRNPKVMRKAQAELRNNLQGKTTVTEDDLTNLKYLKLVIKETLRLHPVLPLLLPRECQEACNVIGYDVPKYTTVFINVWAINRDPKYWDMAEMFKPERFDNSMIDFKGTDFEFVPFGAGRRICPGIAFAQSNMELVLATLLYHFDWELPSGMSPEELDMTEDMGLSVRRKNDLYLHPTVSAAMEQVSCFAAAAAAAVVVVVLLLARMLLAPRGEWDGLNLPPSPPRLPFIGSFHLLRRSPLVHRALADVARQLGSPPLMYMRIGELPAIVVSSADAAREVMKTHDIKFASRPWPPTIRKLRAQGKGIFFAPYGALWRQLRKICIVKLLSVRRVSSFHGVREEEAGRLVAAVAATPPGQAVNLTERIEVVIADTTMRPMIGERFERREDFLELLPEIVKIASGFSLDDLFPSSWLACAIGGSQRRGEASHRTSYELVDSAFRQRQQQREAMAASPPDIAKEEEDDLMDDLIRIHKEGSLEVPLTAGNLKAVILDLFGAGSETSSDALQWAMSELMRNPRVMEKAQNEVQSILKGKPSVTEADVANLKYLKMIVKETHRLHPVLPLLIPRECQQTCQIMGYDVPQGSVIFINSWAIMRDPKHWDDAETFKPERFEDGEIDLKGTNYEFTPFGAGRRICPSLALAQASIEFMLATLLYHFDWELPNGAAPEELDMTEEMGITIRRKKDLYLLPTLRPPPAAMEQVSCFAAAAAFVLVVLSLARMLLAPRREWDGLNLPPSPSRLPFIGSFHLLRRSPLVHRALADVVRQLGAPPLMYMEIGEVPAIVVSCADAAREIMKTHDINFSSRPWPPTVQKLRAQGKGIFFEPYGALWRQLRKICIVKLLSVRRVSSFHGVREEEAGRLVAAVAATPPGQAVNLTERIKVAIADTTMRPMIGERFERREDFLEVLPEIVKLASGFSLDDLFPSSWLAGAIGGSRRRGEAVNRASYELVDSAFRQRQQQKEAMAAPPPDIAKEEEDDLMDELIRIHKEGSLEVPLTAGNLKAVILELFCAGSETSSNAIQWAMSELVRNPRVMEKAQNEVRSILKGKPTVTEADMVDLTYVKMIVKETHSLHPVLPLLTPRVC
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLaMu_02g0006400 | OsLaMu_02g0006400.01 | Chr02 | 4619331 | 4632389 | + | NAM | ||
CDS seq | atggccatggtgcaagacatcaccggctacctgtgcctctccttggctctcctcttgctcactctcgtcctccacaaggtggcgaggaaggcgaccggtaatggcgccggcaagccgaggcttccgccggggccgtggcggctgccggtcatcggcaacctccaccaggtcgcgatgggcggcccgctcgtccaccgcaccatggccgacctggcgcgccggctggaCGcgccgctcatgtcgctcaggctcggcgagctccgcgtcgtcgtcgcctcatccgccaacgccgccagggagatcaccaagacgcacgacgtcgcgttcgcgacgcggccgtggagctccaccatccgcgtcctgatgagcgacggcgttgggctggtgttcgcgccctacggcgcgctgtggcggcagctccgcaagatcgccgtggtggagctcctcagcgcgcgccgcgtccagtcgttccgccgcatccgggaggacgaggtcggccgcctcgtcgccgccgtcgccgccgccccggcggcgcagcccgtgaacgtcagcgagcggatcgcggcgctcatctccgactcggcggtgcgcaccatcatcggcgaccggttcgagaggcgggacgagttcctggagggtctcgccgaggcgatcaagatcacctccgggttcagcctcggcgacctgttcccgtcgtcgaggctggccagcttcgtcggcggcacgacgcggcgggcggaggcgaaccaccgcaagaacttcgagctgatagagtgcgctctgaggcagcacgaggagcggagggccgccggcgccgtggacgacgacgaggacctcgtcgatgtgcttctcagggttcagaaggatgggagcctccagatgcctctcaccatgggcaatatcaaagccgtcgtcctggaacTttttggtgctgggagcgagacatcagcTAAtacacttcaatgggcgatgactgagctcataatgaatccaagagtgatgctgaaggcacaagctgagttaagtaacgtcatcaaaggaaagcaaacgatatctgaagatgacttagttgaattgaagtacttaaaacttattatcaaagagaccttaaggttacatcctgtagtgccactacttctccctagggaatgtcgggagacatgtgaggtcatgggttacgatatcctcataggtactattgtgcttgttaacgtatgggcaataggtagagatcctaagtattgggaggatgctgagacattcatacctgaacgatttgaggatggccatatagacttcaaaggaacaaactttgaatttataccgtttggagctggacgaaggatgtgccctggcatggtatttgcagaagtaatcatggagctcgctctagcctcattgctttaccactttgattgggagctccctgatggcatctcgccaaccaaggtggacatgatggaggagttgggtgctacaattcgaagaaagaacgatctttaccttattcctgctgtccgtctgcacctgcacatcgccatggccatggccgacctggagttggagaaggttgcgagcttcttgctggcggcgctgctgccgctcgtgctcttcaagctggcggcggcgaagcgcggtggtggcgatggcggcatgaggctgccgcctgggccgtggcggctgccggtgatcggcaacctgcaccagatcatggcgggtggccagctcgtgcaccgcaccatggccggcctggcgcgggggctcggcgacgcgccgctgctgtcgctcaggctcggcgaggtCcccgtcgtcgtggcctcgtcggccgacgccgcgagggagatcatgagcaggcacgacgccaagttcgccacgcggccgtggagccccaccgtgcgggtccagatggtcgacggcgagggcctcgcgttcgcgccctacggcgcgctgtggcggcagctgcgcaagatcaccatggtggagctgctcagcccgcgccgcgtcaggtcgttccgccgcgtgcgggaggaggaggtcggccgcctcgtcgtcgccgtcgccacggcggcgacgcggcggcccggcgaggccgccgtgaacgtcggcgagcggctcaccgtgctgatcaccgacatcgcggtgcgcacgatcatcggcgaccggttcgagcggcgggaggatttcctcgacgccgccgccgagtgggtcaagatcatgtccgggttcagcctcggcgacctgttcccgtcgtcgaggctggccagcttcgtcagcggcacggtgcgccgggcggaggcgaaccaccgcaagaacttcgagctgatggattacgctctcaagcagcatgaggagaagagggcagctgctgcagctgccggcgccggcgccgtggaagacgatgaggacatcgtcgacgtgcttctcaggattcagaaggaagggggcctcgaagtgcccctcaccatgggcgtcatcaaaggcgtcattcgtgaccTttttggtgccgggagtgagacatcagctaatacactccaatggactatgtccgagctcgtgaggaacccaagagtgatgcaaaaggcacaaactgagctacgtgattgtcttcgaggaaagcaatcggtgtcagaagatgatttgatcggattgaaatacttgaagcttgtcatcaaggaaaccctaaggctgcatcctgtagtgccactgcttcttccgagagaatgtcaagagacatgtaacattatggggtacgacatgctcaagggcacaaacgtgctcgtgaacgtctgggcaatatgcagagatcctaggcattgggaaaatgctgagacattcataccagagcgatttgaggatagcaccgtagactttaaaggcacagactttgagttcataccatttggagcaggacgaaggatgtgccctggtttggcatttgcgcaggttagcatggagcttgctctagcctcattgctatatcatttcgactgggaactccctagtggtgttgcgccaagcaatctagacatggaagaggagatgggtatcaccatccgaaggaagaatgatctttacctggttccaaaggtccgtgtgcctctatag
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Protein seq | MAMVQDITGYLCLSLALLLLTLVLHKVARKATGNGAGKPRLPPGPWRLPVIGNLHQVAMGGPLVHRTMADLARRLDAPLMSLRLGELRVVVASSANAAREITKTHDVAFATRPWSSTIRVLMSDGVGLVFAPYGALWRQLRKIAVVELLSARRVQSFRRIREDEVGRLVAAVAAAPAAQPVNVSERIAALISDSAVRTIIGDRFERRDEFLEGLAEAIKITSGFSLGDLFPSSRLASFVGGTTRRAEANHRKNFELIECALRQHEERRAAGAVDDDEDLVDVLLRVQKDGSLQMPLTMGNIKAVVLELFGAGSETSANTLQWAMTELIMNPRVMLKAQAELSNVIKGKQTISEDDLVELKYLKLIIKETLRLHPVVPLLLPRECRETCEVMGYDILIGTIVLVNVWAIGRDPKYWEDAETFIPERFEDGHIDFKGTNFEFIPFGAGRRMCPGMVFAEVIMELALASLLYHFDWELPDGISPTKVDMMEELGATIRRKNDLYLIPAVRLHLHIAMAMADLELEKVASFLLAALLPLVLFKLAAAKRGGGDGGMRLPPGPWRLPVIGNLHQIMAGGQLVHRTMAGLARGLGDAPLLSLRLGEVPVVVASSADAAREIMSRHDAKFATRPWSPTVRVQMVDGEGLAFAPYGALWRQLRKITMVELLSPRRVRSFRRVREEEVGRLVVAVATAATRRPGEAAVNVGERLTVLITDIAVRTIIGDRFERREDFLDAAAEWVKIMSGFSLGDLFPSSRLASFVSGTVRRAEANHRKNFELMDYALKQHEEKRAAAAAAGAGAVEDDEDIVDVLLRIQKEGGLEVPLTMGVIKGVIRDLFGAGSETSANTLQWTMSELVRNPRVMQKAQTELRDCLRGKQSVSEDDLIGLKYLKLVIKETLRLHPVVPLLLPRECQETCNIMGYDMLKGTNVLVNVWAICRDPRHWENAETFIPERFEDSTVDFKGTDFEFIPFGAGRRMCPGLAFAQVSMELALASLLYHFDWELPSGVAPSNLDMEEEMGITIRRKNDLYLVPKVRVPL
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLaMu_02g0006400 | OsLaMu_02g0006400.03 | Chr02 | 4652112 | 4656766 | + | NAM | ||
CDS seq | atgtacctcgccactcgtggctgctttaataaactctccgtgtttttcaatctggcgaggagtggtgatggtggtggtggtGgtggtggtggcgtgaggctgccgcctgggccgtggcggctgccggtcatcgggagcctgcaccacgtggtgggcgaccggctcctccaccgcgccatggcgcgcatcgcgcgccggctcggcgacgcgccgctcgtgtacctgcagctcggggaGgtccccgtcgtggtggcctcgtcgcccggcgccgcgcgcgaggtcacgcggacgcacgacctcgcgttcgccgaccgggcgctcaacccgaccgcgcggcggctgcggcccggcggcgccGgggtggcgctcgcgccgtacggcgcgctgtggcgtcagctccgcaagatctgcgtcgtcgagctcctcagcgcgcgccgcgtccggtcgttccgccgcgtccGggaggaggaggccggccgcctcgtgggcgcgctcgccgccgccgccgcgtcgcccggcgaggaggcggccgtcaacttcaccgagcggatcgcggaggccgtctcggacgcggcgctgcgcgccatgatcGgggacaggttcgagcggcgcgacgagttcttgcaggagctcaccgagcagatgaagctcctcggcgggttcagcctcgacgacctgttcccgtcgtcgtggctggcgagcgccatcggcggcagggcgcggcgagcggaggcgaacagcaGgaagctctacgagctcatggactgcgccatccggcagcaccagcagcagcgggcggaggccgccgtggtagacggcggcgccggcgtcgaggacgacaagaaccaagacctcatagacgtgctcctgaacatacagaaacaaggggagctcgagacgcctctcaccatggaacaaatcaaagctgatctctttagtggaggtagcgagacatcggcgactacgcttcaatgggcgatgtcggagctaataaagaacccaatggttatgcaaaagacacaagccgagctacgtgacaaacttaggagaaagccaactgtgacagaggatgatttgtctggcttaaagtatgtaaagctcattattaaggagaccctaaggcttcaccctgtggtaccactgcttgtcgcaagagagtgtcgtgaatcatgcaaagtcatggggtatgatgttccaaaaggcaccactgtatttgttaacgtgtgggctatcggcagagacccaaagtactgggatgacgctgaggagtttagaccagaacggtttgaacacagtactgttgacttcaagggcgtggacctcgagttcataccgtttggcgcaggacgaagaatatgtcctggtatggcattcgcagaagcAatcatggaacttctgcttgctgcactgctctaccactttgactgggaactccctaatggaatggtagcgagcgagctggatatgacagaGgagatgggcatcaccgtccggaggaagaatgaccttcacctccgccccatcctccgtgtgttgtaa
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Protein seq | MYLATRGCFNKLSVFFNLARSGDGGGGGGGGVRLPPGPWRLPVIGSLHHVVGDRLLHRAMARIARRLGDAPLVYLQLGEVPVVVASSPGAAREVTRTHDLAFADRALNPTARRLRPGGAGVALAPYGALWRQLRKICVVELLSARRVRSFRRVREEEAGRLVGALAAAAASPGEEAAVNFTERIAEAVSDAALRAMIGDRFERRDEFLQELTEQMKLLGGFSLDDLFPSSWLASAIGGRARRAEANSRKLYELMDCAIRQHQQQRAEAAVVDGGAGVEDDKNQDLIDVLLNIQKQGELETPLTMEQIKADLFSGGSETSATTLQWAMSELIKNPMVMQKTQAELRDKLRRKPTVTEDDLSGLKYVKLIIKETLRLHPVVPLLVARECRESCKVMGYDVPKGTTVFVNVWAIGRDPKYWDDAEEFRPERFEHSTVDFKGVDLEFIPFGAGRRICPGMAFAEAIMELLLAALLYHFDWELPNGMVASELDMTEEMGITVRRKNDLHLRPILRVL
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.115466 | 0.420202 | None |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0184900 | RBH | 0.000000 | 0.444793 | 1.521383 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g09240 | RBH | 0.474128 | 0.199998 | 1.284716 |
Nipponbare | IRGSP 1.0 | RAP-db | Os02g0185500 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0006500 | SBH | 0.048737 | 0.000000 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0006620 | RBH | 0.0 | 9.248707 | 0.934067 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0006430 | RBH | 0.0 | 0.000000 | 0.672735 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0006340 | SBH | 0.531868 | 0.742172 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0006390 | RBH | 7.072862 | 40.867245 | 5.219444 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0080900 | RBH | 0.291971 | 9.780597 | 0.011101 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0006380 | RBH | 0.414991 | 0.050392 | 0.249546 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0083400 | RBH | 0.260263 | 3.9379715 | 0.036648 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0006820 | SBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0006390 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0006630 | RBH | 0.000000 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0006630 | RBH | 0.0 | 0.137042 | 0.000000 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0023710 | SBH | 0.076374 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G006500 | RBH | 0.617630 | 5.825593 | 0.997042 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0006470 | SBH | 5.127800 | 35.923454 | 1.488500 |