Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os01g41810 | OGI:01013090 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr01:23673292-23675869 | ||||||||
| Gene Symbol | CYP72A32, OsCYP72A32 | ||||||||||
| DNA seq | TCATATAGCTCTAATTTTAATCTGTGCACCGTGCATCGGGTGTAAAGTTATCATAGTATGTGGCGCATGAGTGTACGTTGGCGCAAGCTCAAACTCCAAGCGTTGAAGAATCAGACACAACGCCATCTTGGCCTCAAGCAACGCGAAGTTTTGGCCGATGCAGATTCGCGGTCCCCAACCGAATGGGAGGAACGCACCCGGATCCTTAGATGCCTTAGAGATCCCCTCAGAGAACCTCTCTGGTTTGAACTCATGCACGTCACTTCCCCAGATTTTCAGATCATGGTGGATGAACAGCACGGGAAGATTAATGATGACACCAGCAGGGTAAGTGACGCCTCCTATCTTCATCTCCTTGTATGTTCTCCGCTTAAGCTCGATGAACGGTGGGTACAACCTAAGAACCTCATAGAGGATCATTGTCACCTGCATGACGCACAAATCAATGAGATTTAGTACTTACAAGTTAATTACATCTATCTAAACTCATGTGAACGAAATGGTATTATCAATTAAATCCTACAAGATACTGACAATTTTGAGGTTGTTCAAGCCATCGTACTCAGGTTTGTTCTTCCCAAATAGTCCTAGGATCTCTTTCCTTGCACGATCCTGCCACTCGGGGTGCATGCTTAATAGCAATATGGTCCATGTGAGAAGCACTGATGTTGTATCCGCTCCTGCAAAGTAGAACAACTTGCATTCCTCCATGATATCCTTGATTGTCAAGCCTTGGCTTGATTGACTATTCTCTTCCGTGTGTCTCATGTTTGACTCAAGCAATATGCCAAGTAAATCATCTTTTGTGCTTTCACCTTCTTTCATAGCTTGCATTCTTTTCCCAATCATACTCCTTAGAATCGATTCGATCTCTTTATTAATTTGATGCATCTTCCGGTTGTTCTCAGTAGGCAAATACCTGAAATGGAGAATATATCCAATCAATAATTTGAGGTCGTCACATCCTTATTTGAGTGGTAATTAAAAATTTAAACTAGCTGAACGGATTAGGACAAAATTGTATGGTCGACGATGTCAAAACTTTTCTAACCATTAGGAGGTATATAGACTAGAGAGGGATATGTCCCTCCCGACTAATATTAATTACCCGTAGCTCTCAAAGACTAAAGAAAAACTCAATATCAAATACTAAACTGGATTTTCAATCCGATTATTTTTTTTACTCTCTTTTTGGAGATCATGTATCCCGCAAGTAACAAGGAGATATATATATATTTCCAATGATAGGGGATATTTTGACTGAGAGAAATAAGATACGTACTTAAGACTGCTCAGTGTAACCAAATAAATATGCTCTCGATATTAAGTTAAGAACCAGGGAAATTAAATTACTCGGTACTTTTAAGTATTAAATTCTCACATGTAACCCGGGATGAAAATCTTCTCGACGGATTTCATTACACGCTCAAATAGCTCGCCCTGCAGCTCGAAGATCCTTCTTCCTTCAAGATAGCTGCTTCCGAACGCGGTGCGCGAGATGACATCTCCGGTGAGGCTCTTGAGCTCCGGCCAGCAATCCACCTCGTACGAGCCATCAGAACCAATGGCCCCCATCCACCTGCTGATCAGCTCCTCGCAGCACGCAGAAAACACCGGCAGCATGAGCTGCACACATTCTCCGACGACATTTCAATGATCAGACAAAGAAAAAAATTGGCTAATACTTCTATTTTATATTATAAGTTTTTTTTCCTATATCGGACTTTCTAAAGTTTAATAATAAAAAGTTATAGCAAAATTTATAACACTAAATTAATTTTATTGAATCCAACATTGAATATATTTTTGTTCATTTTGTGTTGAAAATATTGTTATGTTTTTTCAAAACTTAATCAAGATAAGAGAAGTTGGACTTAAAAATAATCAAAGCATCTTATAATATACGATGAAACGTAAGAATAGCTACTACTAGAACAGTATGTAACATTTAATATTTTTGCATGCATAAGAGAGTGCAACTTTTTCTCTCAAATTCAATATGTAAATTGGTTGCAAGAAATGGTACCTTGAGCTTCTCGAGCTGGAAAGCCGGGTTGAGGATCCTCCTGTGCTTGGCCCACTTCTCGCCCTCGTGGTAGGAGAGGCCCTGGGGCAGCAGCTTCGATAGCGCCTGGAACCTGATCTTCTCGAAGTGGCCGAACTTGTTGGACATGACGACCTTGGCCAGCTCGGGATCGGTGACGTGCACCTCCGGCGTCGGGCCGAGCCAGGTGATGCACGGCTTGCCGTAGTGCTGCTCCGGCCTGACGACGGCGTCGTGGAGGAACGGCTCGATGCGCGGCGCGATGTCGTGGCACCGCAGCGGCAGCGGCCTCGCCCAGGCCTCCTTCCTCCGCCGGCTCTCCTCCGCGAGGTCGCCGGTGAGGAAGCGGTAGGACGAGCCGCGGAGGCCCCGCGCCCGCAGCGCCTTCTCCAGCCGCCGCGGCCGCCACCACAGGCGGTGGAGCTGGAGGCCGGCCTGCCACGCGAGGACGAGGCCGAAGAGGAGACCGAACGCCACGAGGATTGTTGGCGATGAGGCCGGAGCCCACATCAACAGCCACCCTCCAAGAACCAT
More
|
||||||||||
| CDS seq | ATGGTTCTTGGAGGGTGGCTGTTGATGTGGGCTCCGGCCTCATCGCCAACAATCCTCGTGGCGTTCGGTCTCCTCTTCGGCCTCGTCCTCGCGTGGCAGGCCGGCCTCCAGCTCCACCGCCTGTGGTGGCGGCCGCGGCGGCTGGAGAAGGCGCTGCGGGCGCGGGGCCTCCGCGGCTCGTCCTACCGCTTCCTCACCGGCGACCTCGCGGAGGAGAGCCGGCGGAGGAAGGAGGCCTGGGCGAGGCCGCTGCCGCTGCGGTGCCACGACATCGCGCCGCGCATCGAGCCGTTCCTCCACGACGCCGTCGTCAGGCCGGAGCAGCACTACGGCAAGCCGTGCATCACCTGGCTCGGCCCGACGCCGGAGGTGCACGTCACCGATCCCGAGCTGGCCAAGGTCGTCATGTCCAACAAGTTCGGCCACTTCGAGAAGATCAGGTTCCAGGCGCTATCGAAGCTGCTGCCCCAGGGCCTCTCCTACCACGAGGGCGAGAAGTGGGCCAAGCACAGGAGGATCCTCAACCCGGCTTTCCAGCTCGAGAAGCTCAAGCTCATGCTGCCGGTGTTTTCTGCGTGCTGCGAGGAGCTGATCAGCAGGTGGATGGGGGCCATTGGTTCTGATGGCTCGTACGAGGTGGATTGCTGGCCGGAGCTCAAGAGCCTCACCGGAGATGTCATCTCGCGCACCGCGTTCGGAAGCAGCTATCTTGAAGGAAGAAGGATCTTCGAGCTGCAGGGCGAGCTATTTGAGCGTGTAATGAAATCCGTCGAGAAGATTTTCATCCCGGGTTACATGTATTTGCCTACTGAGAACAACCGGAAGATGCATCAAATTAATAAAGAGATCGAATCGATTCTAAGGAGTATGATTGGGAAAAGAATGCAAGCTATGAAAGAAGGTGAAAGCACAAAAGATGATTTACTTGGCATATTGCTTGAGTCAAACATGAGACACACGGAAGAGAATAGTCAATCAAGCCAAGGCTTGACAATCAAGGATATCATGGAGGAATGCAAGTTGTTCTACTTTGCAGGAGCGGATACAACATCAGTGCTTCTCACATGGACCATATTGCTATTAAGCATGCACCCCGAGTGGCAGGATCGTGCAAGGAAAGAGATCCTAGGACTATTTGGGAAGAACAAACCTGAGTACGATGGCTTGAACAACCTCAAAATTGTGACAATGATCCTCTATGAGGTTCTTAGGTTGTACCCACCGTTCATCGAGCTTAAGCGGAGAACATACAAGGAGATGAAGATAGGAGGCGTCACTTACCCTGCTGGTGTCATCATTAATCTTCCCGTGCTGTTCATCCACCATGATCTGAAAATCTGGGGAAGTGACGTGCATGAGTTCAAACCAGAGAGGTTCTCTGAGGGGATCTCTAAGGCATCTAAGGATCCGGGTGCGTTCCTCCCATTCGGTTGGGGACCGCGAATCTGCATCGGCCAAAACTTCGCGTTGCTTGAGGCCAAGATGGCGTTGTGTCTGATTCTTCAACGCTTGGAGTTTGAGCTTGCGCCAACGTACACTCATGCGCCACATACTATGATAACTTTACACCCGATGCACGGTGCACAGATTAAAATTAGAGCTATATGA
More
|
||||||||||
| Protein seq | MVLGGWLLMWAPASSPTILVAFGLLFGLVLAWQAGLQLHRLWWRPRRLEKALRARGLRGSSYRFLTGDLAEESRRRKEAWARPLPLRCHDIAPRIEPFLHDAVVRPEQHYGKPCITWLGPTPEVHVTDPELAKVVMSNKFGHFEKIRFQALSKLLPQGLSYHEGEKWAKHRRILNPAFQLEKLKLMLPVFSACCEELISRWMGAIGSDGSYEVDCWPELKSLTGDVISRTAFGSSYLEGRRIFELQGELFERVMKSVEKIFIPGYMYLPTENNRKMHQINKEIESILRSMIGKRMQAMKEGESTKDDLLGILLESNMRHTEENSQSSQGLTIKDIMEECKLFYFAGADTTSVLLTWTILLLSMHPEWQDRARKEILGLFGKNKPEYDGLNNLKIVTMILYEVLRLYPPFIELKRRTYKEMKIGGVTYPAGVIINLPVLFIHHDLKIWGSDVHEFKPERFSEGISKASKDPGAFLPFGWGPRICIGQNFALLEAKMALCLILQRLEFELAPTYTHAPHTMITLHPMHGAQIKIRAI |
||||||||||
| Function | Cytochrome P450 72A15 [UniProtKB/Swiss-Prot:Q9LUC5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os01g41810 | LOC_Os01g41810.1 | Chr01 | 23673292 | 23675869 | - | MSU_osa1r7 | ||
| CDS seq | ATGGTTCTTGGAGGGTGGCTGTTGATGTGGGCTCCGGCCTCATCGCCAACAATCCTCGTGGCGTTCGGTCTCCTCTTCGGCCTCGTCCTCGCGTGGCAGGCCGGCCTCCAGCTCCACCGCCTGTGGTGGCGGCCGCGGCGGCTGGAGAAGGCGCTGCGGGCGCGGGGCCTCCGCGGCTCGTCCTACCGCTTCCTCACCGGCGACCTCGCGGAGGAGAGCCGGCGGAGGAAGGAGGCCTGGGCGAGGCCGCTGCCGCTGCGGTGCCACGACATCGCGCCGCGCATCGAGCCGTTCCTCCACGACGCCGTCGTCAGGCCGGAGCAGCACTACGGCAAGCCGTGCATCACCTGGCTCGGCCCGACGCCGGAGGTGCACGTCACCGATCCCGAGCTGGCCAAGGTCGTCATGTCCAACAAGTTCGGCCACTTCGAGAAGATCAGGTTCCAGGCGCTATCGAAGCTGCTGCCCCAGGGCCTCTCCTACCACGAGGGCGAGAAGTGGGCCAAGCACAGGAGGATCCTCAACCCGGCTTTCCAGCTCGAGAAGCTCAAGCTCATGCTGCCGGTGTTTTCTGCGTGCTGCGAGGAGCTGATCAGCAGGTGGATGGGGGCCATTGGTTCTGATGGCTCGTACGAGGTGGATTGCTGGCCGGAGCTCAAGAGCCTCACCGGAGATGTCATCTCGCGCACCGCGTTCGGAAGCAGCTATCTTGAAGGAAGAAGGATCTTCGAGCTGCAGGGCGAGCTATTTGAGCGTGTAATGAAATCCGTCGAGAAGATTTTCATCCCGGGTTACATGTATTTGCCTACTGAGAACAACCGGAAGATGCATCAAATTAATAAAGAGATCGAATCGATTCTAAGGAGTATGATTGGGAAAAGAATGCAAGCTATGAAAGAAGGTGAAAGCACAAAAGATGATTTACTTGGCATATTGCTTGAGTCAAACATGAGACACACGGAAGAGAATAGTCAATCAAGCCAAGGCTTGACAATCAAGGATATCATGGAGGAATGCAAGTTGTTCTACTTTGCAGGAGCGGATACAACATCAGTGCTTCTCACATGGACCATATTGCTATTAAGCATGCACCCCGAGTGGCAGGATCGTGCAAGGAAAGAGATCCTAGGACTATTTGGGAAGAACAAACCTGAGTACGATGGCTTGAACAACCTCAAAATTGTGACAATGATCCTCTATGAGGTTCTTAGGTTGTACCCACCGTTCATCGAGCTTAAGCGGAGAACATACAAGGAGATGAAGATAGGAGGCGTCACTTACCCTGCTGGTGTCATCATTAATCTTCCCGTGCTGTTCATCCACCATGATCTGAAAATCTGGGGAAGTGACGTGCATGAGTTCAAACCAGAGAGGTTCTCTGAGGGGATCTCTAAGGCATCTAAGGATCCGGGTGCGTTCCTCCCATTCGGTTGGGGACCGCGAATCTGCATCGGCCAAAACTTCGCGTTGCTTGAGGCCAAGATGGCGTTGTGTCTGATTCTTCAACGCTTGGAGTTTGAGCTTGCGCCAACGTACACTCATGCGCCACATACTATGATAACTTTACACCCGATGCACGGTGCACAGATTAAAATTAGAGCTATATGA
More
|
|||||||
| Protein seq | MVLGGWLLMWAPASSPTILVAFGLLFGLVLAWQAGLQLHRLWWRPRRLEKALRARGLRGSSYRFLTGDLAEESRRRKEAWARPLPLRCHDIAPRIEPFLHDAVVRPEQHYGKPCITWLGPTPEVHVTDPELAKVVMSNKFGHFEKIRFQALSKLLPQGLSYHEGEKWAKHRRILNPAFQLEKLKLMLPVFSACCEELISRWMGAIGSDGSYEVDCWPELKSLTGDVISRTAFGSSYLEGRRIFELQGELFERVMKSVEKIFIPGYMYLPTENNRKMHQINKEIESILRSMIGKRMQAMKEGESTKDDLLGILLESNMRHTEENSQSSQGLTIKDIMEECKLFYFAGADTTSVLLTWTILLLSMHPEWQDRARKEILGLFGKNKPEYDGLNNLKIVTMILYEVLRLYPPFIELKRRTYKEMKIGGVTYPAGVIINLPVLFIHHDLKIWGSDVHEFKPERFSEGISKASKDPGAFLPFGWGPRICIGQNFALLEAKMALCLILQRLEFELAPTYTHAPHTMITLHPMHGAQIKIRAI
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 4.397040 | 3.310292 | 0.811658 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0602400 | RBH | 6.363934 | 4.809669 | 2.796535 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g41820 | RBH | 0.522790 | 0.099489 | 0.138885 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0602400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0026010 | SBH | 0.380584 | 1.018520 | 0.660300 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0023950 | RBH | 0.255419 | 1.194231 | 4.003400 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0025980 | RBH | 0.343233 | 0.0 | 1.553312 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0023620 | RBH | 0.424099 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0023380 | SBH | 5.186004 | 2.093777 | 1.716186 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0421000 | SBH | 0.892174 | 1.455999 | 0.3114915 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0023300 | RBH | 0.546497 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0385300 | SBH | 5.83854 | 4.3827855 | 1.476269 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0024990 | SBH | 0.053336 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0023270 | RBH | 1.553524 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0023530 | SBH | 4.089728 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0023530 | RBH | 1.013698 | 0.0 | 0.484182 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0023450 | SBH | 0.515966 | 0.315297 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G025350 | SBH | 0.087947 | 0.756523 | 0.201044 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0025100 | SBH | 0.0 | 0.000000 | 0.227597 |
