Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_01g0024990 | OGI:01013090 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr01:26546235-26564299 | ||||||||
| Gene Symbol | CYP72A31, CYP72A32, OsCYP72A32, CYP72A33, CYP72A19, OsCYP72A19, CYP72A1, OsCYP72A1 | ||||||||||
| DNA seq | atgcctagatactctgtttatcttttgcaggtgacgatgatactgcacgaggtgctcaggctgtacccgccggcggtcacgttgagccgaagaacattcaaggagattcagattgggggcatcacgtacccggctggtgtgggccttgagctgcccataatcctgattcaccacaacaccgatgtgtgggggaaggatgcccatgagtttaagccagagaggttcgcggatgggatctccaaggcgaccaagaccaatcagcaggcgttcttcccgttcggttggggcccgaggatctgcattggccagaacttcgcgatgctcgaggccaagatggcgttatgcgtgatacttcagaactttgagtttcagttgtcgccctcgtacacccatgctccttacgccagtgtcacgctacatccgcagcatggtgcacaaattatactcacaagaatatgatcatctggttttggtagcagcggccacccgtgaatccgcttatatatatattattttcgattttccataggctaatctatggatcgacacagaaaaatggttcacaataatcacatacattagtatgtaactaggtgcacgtatgttgacacggtatagtatgtgtggatgtcaggggaacttgtacgtgctgatgagcgtgaaaaataaagcaaacaaataattgaatatggtgaggtgaaaatttatagagctagagaaagccaattgaatatatgtttgcgattgcacacttaatcactccacttatctttacgtttcttgaggatatacaacaaaattttattttatttttgcaaattctggttcttttgttttattatgcaatcttacacttaatcactcgggttattttgcaatccctgagattgtatcacatatttcaatcttaaacttttttcaaactcatttgtgacacctcctagtatctattccaggacaggacatataaaacattaatctaaaaaggggtttgtttcataacctctcaattatggcctaactgattttcgattgacaacttctaaacaattctccttttattctaaacccaaatttagagataatttaggtgaagtatcatcgatgtggtaatgtggtgtcattcaatgattcaacctattgtactcgatatgtagttagaatttgcacaaaaaatattgttttaatcttctatgtttccttccaacttttgttgtatttactgaagttggtcggtactccattgtctcaaaataattttatctttatccaattcgtttttcttataaagacttcaactttagagtaattattgtattggagtttgaaaaagtaggtggcaagttactactatttgttcctgttgtgaatttgtaatttttattctacttgatagtttacaaggaactcacattttatatctctgccgttcattatgacttggtatatacctctccgttttacacttggattttttccttgtcaaacttcttttagtttgactaattaagtttatagaaaagtttaacaacatctacaatatttaattagtttcattgaatctaccatatattttgatattatatgtttgtttgatgttgagaatgttattatatttttccttaaacttgatcaaattttaaaaaatcgacttaaaaaagtcaaaatgtcctattgtatgagacagatggagtatatgctagatggacgggtatgtttttttcccctaatgtgattatgtgagcatttcctcagcgagcaattagtccaggtatacacattactccactatactacctccgttcataatataatataaagaattggggtattcaaattcaaatttttgtcacaaaatgtaagagattaagggtatgttcactttatagccaaaattaaccataccaagttttagctatcccaaaatttaggaaggtaacaatccaaacattgccaaaacttacctccactaccaaagtttggtaattctataatcttcctcaaaaacatgacaaaagaaacaaaacataggggatgttcagtttattgccaaaataaaccttaccaagttttggcttcaccaaaattttacaagttaacaatccaaacattaccaaaaacttgcctccactattaaactttgataattctagaatcttcctttcacaaaaacttagtaaatattgatttaagcatcaaagtgaacaacccccatagcttaacacttgtcaactttaccaaatgttttccctaagtagtattacttttccctccaacaactctcattcaaatttctccacactttaccccaacctacctcccacttttcaaatactcctcatttaattatggacataatagtcttttccTttttttttctttctctaaaacaacctaatccattatgcgatggaggtagtagccaaggactccaaaattctggttggactacctacatatggcatgtggcccattttcaagcggcccaagtcatattagactcagttcacaatagtaaccagggataaaaacagagcggatatggacgaacaattatcataccatattcgctttcatattttttgccGggtgtaaaaacgaatacgaatggcttggatacagaaacaaatacaaattatctcaaatacgaataaggatcgaatatgatcagatatgaatatggcaataTttttttatcaaaacacgaaaaccacctcaacttctaatagaaacgaatatcatcatatataattagctcgttttatataaaatatagtataatttataaacatatttaaaagtttaaataatattaataatgttgactagtgttaagggatatgttactactaaattctaaaaatgtacattgaaagacatagagttataaagaaatgtggtatgtcttatggcttcagcggatatctaaatagcactgttcaccagatatccgtacccgtcggaaaccctgatatcatatgcgtagcagtaaccactaatcaagcaaaacgaccactcgaaaaataaaaatcaagcaaaacgaagcagccgcgaagcactcctcacatggcgggtagccgtccagtgcgtcgcccatccgagaggactttgaccaatcagagtatcagttccccctggaatttcttctcaaccaagttccttaccagcaaggtacctcctaggatcgatgctatgctagcaatgctgattggccccgtcaagcaagtgacacctctatttaacctcacccccagcaccgtacataccatatccacctccagtagtcaaagcacacttgcatcaactcctttttactccactcacttgcactcatagactgactccagcaatggttcttggagcctggttgatgagtccagcctccgtgccatggagcctcctggcgtacggtgtcctgggcctggtgctcctgtggcaggccggccgcctgctgcacagcctgtggtggcggccgcggcgtctggagctggcgctgcgcgcgcagggcctccgcggcacgcgctaccgcttcctcaccggcgacctcggggagcacgggcggctgaacagggaggcctgggcgaggccgctgccgctgcggtgccacgacatcgcgccgcgcgtcgcgccgttcctccacaacgccgtcagggagcacggcagcgcgtgcttcacctggttcggcccgacgccgaaggtgacaatcaccgaccccgacctggccaaggacgtcctgtccaacaagttcggccactttgagaagcccaagttcccgactctgacgaagctgttttcggatagcctcgccaaccacgaaggcgagaagtgggtcaagcacaggaggatccttaacccggctttccatctcgagaaactcaaggtacctacccagactatttttactagtagtattagatagatttattttttctgtttttctgcacctctctgcattggaatataatgtacgaatgatactctgcagctcatgcttccggcattttctgcatgctgtgaggagctggtcagtaagtggatggagtcccttggttctgacggctcgtacgaagtggatgtctggccggagatgcagatcctcaccggagatgtcatttctcgcactgcattcggaagtagctatcttgaaggaagaaggatcttccagctgcaggccgagcaaactgagcgtctcctgaaatgcatgcagaagattgtcattcctggttacatgtgagaattcagcacttaatataccgaataatttagtatgagttgagggttagtttggtcatcttcTttttgatgattctccctgtttatgattgtgttgggatatatcaggtccttgcctactaaaaacaaccggaagatgcatcaaataaagaaagagaccgattcgattttacggggtctagttgacaaaagaatgcaagctatgaaagaaggtgaatgcaccaaagatgatctactgggtttgttgcttgagtcaaacatgagacacatggaagaggatggccaatcaaaccatggattgacaatcgaggaggtcatcgaggagtgcaagctgttctacttcgcgggaatggagacaacgtcagtgctactcacctggactatcctgctcctaagcatgcacccagagtggcaagaccgtgcaaggaaagagatccttggactattcgggaaaaacaaacctgaatacgaaggcctgagccgcctgaaaatcgtgagtatattgtagaattcgacaataccacttcgttctcatgagatgacttaaacaatttgcagctagaagtagtactaaaactcacttatatgtgcattgtgtaggtgacaatgatcctctatgaggttcttcggttgtacccaccagccgtaaccttcactcgaaagtcatacaagcaaatggagatcggaggtgtcacttacccggctggtgtgattgtcgagctcccggtgttactcatacaccatgacccaaacatctgggggagtga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| CDS seq | atgcctagatactctgtttatcttttgcaggtgacgatgatactgcacgaggtgctcaggctgtacccgccggcggtcacgttgagccgaagaacattcaaggagattcagattgggggcatcacgtacccggctggtgtgggccttgagctgcccataatcctgattcaccacaacaccgatgtgtgggggaaggatgcccatgagtttaagccagagaggttcgcggatgggatctccaaggcgaccaagaccaatcagcaggcgttcttcccgttcggttggggcccgaggatctgcattggccagaacttcgcgatgctcgaggccaagatggcgttatgcgtgatacttcagaactttgagtttcagttgtcgccctcgtacacccatgctccttacgccagtgtcacgctacatccgcagcatgcaatggttcttggagcctggttgatgagtccagcctccgtgccatggagcctcctggcgtacggtgtcctgggcctggtgctcctgtggcaggccggccgcctgctgcacagcctgtggtggcggccgcggcgtctggagctggcgctgcgcgcgcagggcctccgcggcacgcgctaccgcttcctcaccggcgacctcggggagcacgggcggctgaacagggaggcctgggcgaggccgctgccgctgcggtgccacgacatcgcgccgcgcgtcgcgccgttcctccacaacgccgtcagggagcacggcagcgcgtgcttcacctggttcggcccgacgccgaaggtgacaatcaccgaccccgacctggccaaggacgtcctgtccaacaagttcggccactttgagaagcccaagttcccgactctgacgaagctgttttcggatagcctcgccaaccacgaaggcgagaagtgggtcaagcacaggaggatccttaacccggctttccatctcgagaaactcaagctcatgcttccggcattttctgcatgctgtgaggagctggtcagtaagtggatggagtcccttggttctgacggctcgtacgaagtggatgtctggccggagatgcagatcctcaccggagatgtcatttctcgcactgcattcggaagtagctatcttgaaggaagaaggatcttccagctgcaggccgagcaaactgagcgtctcctgaaatgcatgcagaagattgtcattcctggttacatgtccttgcctactaaaaacaaccggaagatgcatcaaataaagaaagagaccgattcgattttacggggtctagttgacaaaagaatgcaagctatgaaagaaggtgaatgcaccaaagatgatctactgggtttgttgcttgagtcaaacatgagacacatggaagaggatggccaatcaaaccatggattgacaatcgaggaggtcatcgaggagtgcaagctgttctacttcgcgggaatggagacaacgtcagtgctactcacctggactatcctgctcctaagcatgcacccagagtggcaagaccgtgcaaggaaagagatccttggactattcgggaaaaacaaacctgaatacgaaggcctgagccgcctgaaaatcgtgacaatgatcctctatgaggttcttcggttgtacccaccagccgtaaccttcactcgaaagtcatacaagcaaatggagatcggaggtgtcacttacccggctggtgtgattgtcgagctcccggtgttactcatacaccatgacccaaacatctgggggagtgatgcccacgagtttaagccagataggttcgctgaggggatctccaaggcatccaagaatccgggcgcgttcctcccattcggttgggggccacgtatttgcataggtcaaaacttcgcattgcttgagatcaagatggcattgtgtatgatcttacagtgcttcaagcttgagctcatgccatcgtatactcatgcaccatatagtatggtaactttacgcccgatgcatgcaatggttcttggagccgggttgaggtgtccagcctccgtgccatggagctcgctggcgtacggtctcctgggcctggtgctcctgtggcagggcggccggctgctgcaccggctgtggtggctgccgcggcggctggagctggcgctgcgcgcgcagggcctccgcggcacgcgctaccgcttcctcaccggcgacctcggggagcacgggcggctaaacagggaggcctgggcgaggccgctgccgctgcggtgccacgacatcgcgccgcgcgtcgcgccgttcctccacagcagcgtcagggagcacggcaaggcgtgcttctcatggttcggcccgatccccaaggtgaccatcgccaacccggacctggccaaggacgtgctgtccaacaaattcggtcacttggagaagcacaagttccagggtctgacgaagctgctctccgacggcgtcgccagccacgagggcgagaagtgggttaagcacaggaggatcctcaacccggctttccatctcgagaagctcaaggtgaaccacacaacacagaagtacagaaccacacaacactgcactagtaaactcttgcctttcttcttcttcttcttcttcttcttcttcttcttcttctctctctctctctcctctctctctctctctctctctctctctctgctgttttctgtatctgaatattggaacgtgcgagactctgcagcgcatatgctgccggcgttttctacgtgctgcgaagagctgatcagcaggtggatggagtcccttggttctgaaggcTCGTACGagGTGGAagcctggccggagatgcagagcctgaccggagatgtcatttctcgcaccgcattcggaagcagctaccttgaagggagaaggatcttccagctgcaggcagagcaagctgagcgcctcttgaaatgcgttcagaagattattattccgggttacatgtccttacctactaaaaacaaccggaagatgcatcaaataaagaaagagattgattcgattctacggggtctaattgggaaaagaatgcaagctatgagagaaggtgaaagcaccaaggattatctactgggcctgttgctcgagtcaaacatgagacacacggcagagcatggtcagtcaagccaagggttgacgatcgaggaggtgacaatgatcctctacgaggttcttcggctgtatccactggccgtgaccttgactcggcaaacatataagcagattgagatcggaggcgtcacttaccccgctggcgtgatcatcgagctccccttgctgctcatccacagtgacccagacatatggggaagtgatgtgcacaagtttaatccagagaggttcgctgaggggatttccaaggcatccaaggatccaggcgcgttcctaccatttagttggggcccgagaatctgtattggccaaaacttcgcgttgcttgaggccaagatggcgttgtgtatgattcttcaacacttggagcttgagctcgctctgtcatacactcatgcaccacaaagtttacctgttgaaagcaggagattaaaagtttgggcgttcgtcagcgacgtgcgagggcattgggcatcggcgtcccctgctcagtcgtggagcagaggatggcgttgtcccctgctccccgccgccgccacctcccctgccgctcatctcgccgcggccgccgccggtggcgcttccctcctacgcgactcgccggccggggccgagcgggaggcgccgctggcggcggcggcggcgccggcggggaggggcgtcgggagggtggggcgccggcgaggaggtgcgtcgggagtcggccactcgggagggtgggtgccgcccggtggcggctcacagcacctcatggtcgtcccgatcgtggcatttctgggttggaatttcttctccaccaaatcaagcaattttttcacatattgttcccaaccctcacgccccaccacgacctcctcgtacggcccgcaggccgtccatcaggcctgccacctgctcgccggctgtaggcggccgcggggctaccccgcgcctgaggtcctcctcggcgacctcagggagttcggccggctcaacgaggaGgcgtggtcgtcGGcGccgctgccgCtgggctgccacGacatcgtgCcccgggtcaccccgttcgtgcaccgcaacgtgcgggataacggcaggccgtgctgcttctccTggttcggccccatccccagcgtcaccatcaccgaccccGcccaggtcagggacgtgctgtccaacaagctcggccacttcgagAagcccaagctcccggcacttACCcagcttctcgccgacggcctcaccagCcacgacGgtgagaagtgggtcaagcAcaggaggatcATGAaccctgcGatccatctcgagaagctcaaggtacatcAcgtgaaagcgtctcActcgtacAgacgtacGtacgctaggcgaccgtag
More
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| Protein seq | MPRYSVYLLQVTMILHEVLRLYPPAVTLSRRTFKEIQIGGITYPAGVGLELPIILIHHNTDVWGKDAHEFKPERFADGISKATKTNQQAFFPFGWGPRICIGQNFAMLEAKMALCVILQNFEFQLSPSYTHAPYASVTLHPQHAMVLGAWLMSPASVPWSLLAYGVLGLVLLWQAGRLLHSLWWRPRRLELALRAQGLRGTRYRFLTGDLGEHGRLNREAWARPLPLRCHDIAPRVAPFLHNAVREHGSACFTWFGPTPKVTITDPDLAKDVLSNKFGHFEKPKFPTLTKLFSDSLANHEGEKWVKHRRILNPAFHLEKLKLMLPAFSACCEELVSKWMESLGSDGSYEVDVWPEMQILTGDVISRTAFGSSYLEGRRIFQLQAEQTERLLKCMQKIVIPGYMSLPTKNNRKMHQIKKETDSILRGLVDKRMQAMKEGECTKDDLLGLLLESNMRHMEEDGQSNHGLTIEEVIEECKLFYFAGMETTSVLLTWTILLLSMHPEWQDRARKEILGLFGKNKPEYEGLSRLKIVTMILYEVLRLYPPAVTFTRKSYKQMEIGGVTYPAGVIVELPVLLIHHDPNIWGSDAHEFKPDRFAEGISKASKNPGAFLPFGWGPRICIGQNFALLEIKMALCMILQCFKLELMPSYTHAPYSMVTLRPMHAMVLGAGLRCPASVPWSSLAYGLLGLVLLWQGGRLLHRLWWLPRRLELALRAQGLRGTRYRFLTGDLGEHGRLNREAWARPLPLRCHDIAPRVAPFLHSSVREHGKACFSWFGPIPKVTIANPDLAKDVLSNKFGHLEKHKFQGLTKLLSDGVASHEGEKWVKHRRILNPAFHLEKLKVNHTTQKYRTTQHCTSKLLPFFFFFFFFFFFFFSLSLSSLSLSLSLSLLFSVSEYWNVRDSAAHMLPAFSTCCEELISRWMESLGSEGSYEVEAWPEMQSLTGDVISRTAFGSSYLEGRRIFQLQAEQAERLLKCVQKIIIPGYMSLPTKNNRKMHQIKKEIDSILRGLIGKRMQAMREGESTKDYLLGLLLESNMRHTAEHGQSSQGLTIEEVTMILYEVLRLYPLAVTLTRQTYKQIEIGGVTYPAGVIIELPLLLIHSDPDIWGSDVHKFNPERFAEGISKASKDPGAFLPFSWGPRICIGQNFALLEAKMALCMILQHLELELALSYTHAPQSLPVESRRLKVWAFVSDVRGHWASASPAQSWSRGWRCPLLPAAATSPAAHLAAAAAGGASLLRDSPAGAEREAPLAAAAAPAGRGVGRVGRRRGGASGVGHSGGWVPPGGGSQHLMVVPIVAFLGWNFFSTKSSNFFTYCSQPSRPTTTSSYGPQAVHQACHLLAGCRRPRGYPAPEVLLGDLREFGRLNEEAWSSAPLPLGCHDIVPRVTPFVHRNVRDNGRPCCFSWFGPIPSVTITDPAQVRDVLSNKLGHFEKPKLPALTQLLADGLTSHDGEKWVKHRRIMNPAIHLEKLKVHHVKASHSYRRTYARRP |
||||||||||
| Function | Cytochrome P450 72A15 [UniProtKB/Swiss-Prot:Q9LUC5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_01g0024990 | OsLima_01g0024990.01 | Chr01 | 26546235 | 26564299 | + | NAM | ||
| CDS seq | atgcctagatactctgtttatcttttgcaggtgacgatgatactgcacgaggtgctcaggctgtacccgccggcggtcacgttgagccgaagaacattcaaggagattcagattgggggcatcacgtacccggctggtgtgggccttgagctgcccataatcctgattcaccacaacaccgatgtgtgggggaaggatgcccatgagtttaagccagagaggttcgcggatgggatctccaaggcgaccaagaccaatcagcaggcgttcttcccgttcggttggggcccgaggatctgcattggccagaacttcgcgatgctcgaggccaagatggcgttatgcgtgatacttcagaactttgagtttcagttgtcgccctcgtacacccatgctccttacgccagtgtcacgctacatccgcagcatgcaatggttcttggagcctggttgatgagtccagcctccgtgccatggagcctcctggcgtacggtgtcctgggcctggtgctcctgtggcaggccggccgcctgctgcacagcctgtggtggcggccgcggcgtctggagctggcgctgcgcgcgcagggcctccgcggcacgcgctaccgcttcctcaccggcgacctcggggagcacgggcggctgaacagggaggcctgggcgaggccgctgccgctgcggtgccacgacatcgcgccgcgcgtcgcgccgttcctccacaacgccgtcagggagcacggcagcgcgtgcttcacctggttcggcccgacgccgaaggtgacaatcaccgaccccgacctggccaaggacgtcctgtccaacaagttcggccactttgagaagcccaagttcccgactctgacgaagctgttttcggatagcctcgccaaccacgaaggcgagaagtgggtcaagcacaggaggatccttaacccggctttccatctcgagaaactcaagctcatgcttccggcattttctgcatgctgtgaggagctggtcagtaagtggatggagtcccttggttctgacggctcgtacgaagtggatgtctggccggagatgcagatcctcaccggagatgtcatttctcgcactgcattcggaagtagctatcttgaaggaagaaggatcttccagctgcaggccgagcaaactgagcgtctcctgaaatgcatgcagaagattgtcattcctggttacatgtccttgcctactaaaaacaaccggaagatgcatcaaataaagaaagagaccgattcgattttacggggtctagttgacaaaagaatgcaagctatgaaagaaggtgaatgcaccaaagatgatctactgggtttgttgcttgagtcaaacatgagacacatggaagaggatggccaatcaaaccatggattgacaatcgaggaggtcatcgaggagtgcaagctgttctacttcgcgggaatggagacaacgtcagtgctactcacctggactatcctgctcctaagcatgcacccagagtggcaagaccgtgcaaggaaagagatccttggactattcgggaaaaacaaacctgaatacgaaggcctgagccgcctgaaaatcgtgacaatgatcctctatgaggttcttcggttgtacccaccagccgtaaccttcactcgaaagtcatacaagcaaatggagatcggaggtgtcacttacccggctggtgtgattgtcgagctcccggtgttactcatacaccatgacccaaacatctgggggagtgatgcccacgagtttaagccagataggttcgctgaggggatctccaaggcatccaagaatccgggcgcgttcctcccattcggttgggggccacgtatttgcataggtcaaaacttcgcattgcttgagatcaagatggcattgtgtatgatcttacagtgcttcaagcttgagctcatgccatcgtatactcatgcaccatatagtatggtaactttacgcccgatgcatgcaatggttcttggagccgggttgaggtgtccagcctccgtgccatggagctcgctggcgtacggtctcctgggcctggtgctcctgtggcagggcggccggctgctgcaccggctgtggtggctgccgcggcggctggagctggcgctgcgcgcgcagggcctccgcggcacgcgctaccgcttcctcaccggcgacctcggggagcacgggcggctaaacagggaggcctgggcgaggccgctgccgctgcggtgccacgacatcgcgccgcgcgtcgcgccgttcctccacagcagcgtcagggagcacggcaaggcgtgcttctcatggttcggcccgatccccaaggtgaccatcgccaacccggacctggccaaggacgtgctgtccaacaaattcggtcacttggagaagcacaagttccagggtctgacgaagctgctctccgacggcgtcgccagccacgagggcgagaagtgggttaagcacaggaggatcctcaacccggctttccatctcgagaagctcaaggtgaaccacacaacacagaagtacagaaccacacaacactgcactagtaaactcttgcctttcttcttcttcttcttcttcttcttcttcttcttcttctctctctctctctcctctctctctctctctctctctctctctctgctgttttctgtatctgaatattggaacgtgcgagactctgcagcgcatatgctgccggcgttttctacgtgctgcgaagagctgatcagcaggtggatggagtcccttggttctgaaggcTCGTACGagGTGGAagcctggccggagatgcagagcctgaccggagatgtcatttctcgcaccgcattcggaagcagctaccttgaagggagaaggatcttccagctgcaggcagagcaagctgagcgcctcttgaaatgcgttcagaagattattattccgggttacatgtccttacctactaaaaacaaccggaagatgcatcaaataaagaaagagattgattcgattctacggggtctaattgggaaaagaatgcaagctatgagagaaggtgaaagcaccaaggattatctactgggcctgttgctcgagtcaaacatgagacacacggcagagcatggtcagtcaagccaagggttgacgatcgaggaggtgacaatgatcctctacgaggttcttcggctgtatccactggccgtgaccttgactcggcaaacatataagcagattgagatcggaggcgtcacttaccccgctggcgtgatcatcgagctccccttgctgctcatccacagtgacccagacatatggggaagtgatgtgcacaagtttaatccagagaggttcgctgaggggatttccaaggcatccaaggatccaggcgcgttcctaccatttagttggggcccgagaatctgtattggccaaaacttcgcgttgcttgaggccaagatggcgttgtgtatgattcttcaacacttggagcttgagctcgctctgtcatacactcatgcaccacaaagtttacctgttgaaagcaggagattaaaagtttgggcgttcgtcagcgacgtgcgagggcattgggcatcggcgtcccctgctcagtcgtggagcagaggatggcgttgtcccctgctccccgccgccgccacctcccctgccgctcatctcgccgcggccgccgccggtggcgcttccctcctacgcgactcgccggccggggccgagcgggaggcgccgctggcggcggcggcggcgccggcggggaggggcgtcgggagggtggggcgccggcgaggaggtgcgtcgggagtcggccactcgggagggtgggtgccgcccggtggcggctcacagcacctcatggtcgtcccgatcgtggcatttctgggttggaatttcttctccaccaaatcaagcaattttttcacatattgttcccaaccctcacgccccaccacgacctcctcgtacggcccgcaggccgtccatcaggcctgccacctgctcgccggctgtaggcggccgcggggctaccccgcgcctgaggtcctcctcggcgacctcagggagttcggccggctcaacgaggaGgcgtggtcgtcGGcGccgctgccgCtgggctgccacGacatcgtgCcccgggtcaccccgttcgtgcaccgcaacgtgcgggataacggcaggccgtgctgcttctccTggttcggccccatccccagcgtcaccatcaccgaccccGcccaggtcagggacgtgctgtccaacaagctcggccacttcgagAagcccaagctcccggcacttACCcagcttctcgccgacggcctcaccagCcacgacGgtgagaagtgggtcaagcAcaggaggatcATGAaccctgcGatccatctcgagaagctcaaggtacatcAcgtgaaagcgtctcActcgtacAgacgtacGtacgctaggcgaccgtag
More
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| Protein seq | MPRYSVYLLQVTMILHEVLRLYPPAVTLSRRTFKEIQIGGITYPAGVGLELPIILIHHNTDVWGKDAHEFKPERFADGISKATKTNQQAFFPFGWGPRICIGQNFAMLEAKMALCVILQNFEFQLSPSYTHAPYASVTLHPQHAMVLGAWLMSPASVPWSLLAYGVLGLVLLWQAGRLLHSLWWRPRRLELALRAQGLRGTRYRFLTGDLGEHGRLNREAWARPLPLRCHDIAPRVAPFLHNAVREHGSACFTWFGPTPKVTITDPDLAKDVLSNKFGHFEKPKFPTLTKLFSDSLANHEGEKWVKHRRILNPAFHLEKLKLMLPAFSACCEELVSKWMESLGSDGSYEVDVWPEMQILTGDVISRTAFGSSYLEGRRIFQLQAEQTERLLKCMQKIVIPGYMSLPTKNNRKMHQIKKETDSILRGLVDKRMQAMKEGECTKDDLLGLLLESNMRHMEEDGQSNHGLTIEEVIEECKLFYFAGMETTSVLLTWTILLLSMHPEWQDRARKEILGLFGKNKPEYEGLSRLKIVTMILYEVLRLYPPAVTFTRKSYKQMEIGGVTYPAGVIVELPVLLIHHDPNIWGSDAHEFKPDRFAEGISKASKNPGAFLPFGWGPRICIGQNFALLEIKMALCMILQCFKLELMPSYTHAPYSMVTLRPMHAMVLGAGLRCPASVPWSSLAYGLLGLVLLWQGGRLLHRLWWLPRRLELALRAQGLRGTRYRFLTGDLGEHGRLNREAWARPLPLRCHDIAPRVAPFLHSSVREHGKACFSWFGPIPKVTIANPDLAKDVLSNKFGHLEKHKFQGLTKLLSDGVASHEGEKWVKHRRILNPAFHLEKLKVNHTTQKYRTTQHCTSKLLPFFFFFFFFFFFFFSLSLSSLSLSLSLSLLFSVSEYWNVRDSAAHMLPAFSTCCEELISRWMESLGSEGSYEVEAWPEMQSLTGDVISRTAFGSSYLEGRRIFQLQAEQAERLLKCVQKIIIPGYMSLPTKNNRKMHQIKKEIDSILRGLIGKRMQAMREGESTKDYLLGLLLESNMRHTAEHGQSSQGLTIEEVTMILYEVLRLYPLAVTLTRQTYKQIEIGGVTYPAGVIIELPLLLIHSDPDIWGSDVHKFNPERFAEGISKASKDPGAFLPFSWGPRICIGQNFALLEAKMALCMILQHLELELALSYTHAPQSLPVESRRLKVWAFVSDVRGHWASASPAQSWSRGWRCPLLPAAATSPAAHLAAAAAGGASLLRDSPAGAEREAPLAAAAAPAGRGVGRVGRRRGGASGVGHSGGWVPPGGGSQHLMVVPIVAFLGWNFFSTKSSNFFTYCSQPSRPTTTSSYGPQAVHQACHLLAGCRRPRGYPAPEVLLGDLREFGRLNEEAWSSAPLPLGCHDIVPRVTPFVHRNVRDNGRPCCFSWFGPIPSVTITDPAQVRDVLSNKLGHFEKPKLPALTQLLADGLTSHDGEKWVKHRRIMNPAIHLEKLKVHHVKASHSYRRTYARRP
More
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.053336 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0628000 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g41820 | SBH | 0.522790 | 0.099489 | 0.138885 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0627933 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0024360 | RBH | 0.569233 | 0.0 | 0.714197 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0023950 | SBH | 0.255419 | 1.194231 | 4.003400 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0024260 | RBH | 0.471748 | 0.0 | 0.377089 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0025290 | RBH | 0.061554 | 0.034491 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0023370 | RBH | 0.0 | 3.616535 | 8.243108 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0396100 | RBH | 9.6058605 | 11.421525 | 10.038611 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0024700 | RBH | 0.048869 | 0.211820 | 0.028109 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0409800 | SBH | 1.3210485 | 4.3304605 | 0.3144385 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0023310 | RBH | 0.476392 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0024960 | RBH | 0.451164 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0025210 | RBH | 1.794997 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0025220 | RBH | 0.000000 | 0.122537 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0025090 | SBH | 0.000000 | 0.874014 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G023640 | RBH | 0.252606 | 0.0 | 2.405939 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0025100 | RBH | 0.0 | 0.000000 | 0.227597 |
