Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_01g0023310 | OGI:01013090 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr01:24979402-24982173 | ||||||||
| Gene Symbol | CYP72A31, CYP72A32, OsCYP72A32, CYP72A33, _ | ||||||||||
| DNA seq | atgccacttttattccaaaggtacaaatatcacaactcacaaccaagagttgtactaataaaacacgctaggtcctcgaaaaaaacatgctaggatctgaaacaatcatatagccctaattttaatctgtgcaccatgcatcgggtgtaaagttatcatagtatgtggcgcatgagtgtacgttggcgcaagctcaaactccaagcgttgaagaatcagacacaacgccatcttggcctcaagcaacgcgaagttttggccgatgcagattcgcggtccccaaccaaatgggaggaacgcacccggatccttagacgccttagagatcccctcagagaacctctctggtttgaactcatgcacatcacttccccagatttccagatcatggtggatgaacagcacgggaagattaatgatgacaccagcagggtaagtgacacctcctatcttcatctccttgtatgttctccgcttaagctcgatgaacggtgggtacaacctaagaacctcgtagaggatcattgtcacctgcatgacgcataagtcaatgagatttagtacttacaagttaattacatctatctgaactcatgtgaacgaaatggtattatcaattaaatcctacaaaatactgacaattttgaggtggctcaagccatcgtactcaggtttgttcttcccaaatagtcctaggatctctttccttgcacgatcctgccactcggggtgcatgcttaatagcaatatggtccatgtgagaagcactgatgttgtatccgctcctgcaaagtagaacaacttgcattcctccatgatatccttgattgtcaagccctggcttgattgactattctcttccgtgtgtctcatgtttgactcaagcaatatgccaagtaaatcatcttttgtgctttcaccttctttcatagcttgcattcttttcccaatcatactccttagaatcgattcgatctctttattaatttgatgcatcttccggttgttctcagtaggcaaatacctgaaatggagaatatatccaatcaataatttgaggtcgtcacatccttatttgagtggtaattaaaaatttaaactagctgaacggattaggacaaaattgtatggtcgacgatgtcaaaacttttctgaccattaggaggtatacagactagagagggatatgtccctcccgactaatattaattacccgtagctctcgaagactaaagaaaaactcaatatcaaatactaaactggattttcaatccgattattttttttactctctttttggagatcatgtatcccgcaagtaacaaggagatatatatatttccaatgataggggatattttgactgagagaaataagatacgtacttaagactgctcagtgtaaccaaataaatatgctctcgatattaagttaagaacaagggaaattaaattactcggtacttttaagtattaaattctcacatgtaacccgggatgaaaatcttctcgacggatttcattacacgctcaaatagctcgccctgcagctcgaagatccttcttccttcaagatagctgcttccgaacgcggtgcgtgagatgacatctccggtgaggctcttgagctccggccagcaatccacctcgtacgagccatcagaaccaatggcccccatccacctgctgatcagctcctcgcagcacgcagaaaacaccggcagcatgagctgcacacattctccgacgacatttcaatgatcagacaaagaaaaaaattggctaatacatctattttatattataagttttttttcctatatcggactttctaaagtttaataataaaaagttatagcaaaatttataacactaaattaattttattgaatccaacattgaatatatttttcttcattttgtgttgaaaatattgttatgttttttcaaaacttaatcaagataagagaagttggacttaaaaataatcaaagcatcttataatatacgatgaaacgtaagaatagctactactagaacagtatgtaacatttaatatttttgcatgcataagagagtgcaactttttctctcaaattcaatatgtaaattggttgcaagaaatggtaccttgagcttctcgagctggaaagccgggttgaggatcctcctgtgcttggcccacttctcgccctcgtggtaggagaggccctggggcagcagcttcgatagcgcctggaacctgatcttctcgaagtggccgaacttgttggacatgacgaccttggccagctcgggatcggtgacgtgcacctccggcgtcgggccgagccaggtgatgcacggcttgccgtagtgctgctccggcctgacgacggcgtcgtggaggaacggctcgatgcgcggcgcgatgtcgtggcaccgcagcggcagcggcctcgcccaggcctccttcctccgccggctctcctccgcgaggtcgccggtgaggaagcggtaggacgagccgcggaggccccgcgcccgcagcgccttctccagccgccgcggccgccaccacaggcggtggagctggaggccggcctgccacgcgaggacgaggccgaagaggagaccgaacgccacgaggattgttggcgatgaggccggagcccacatcaacagccaccctccaagaaccattacttactactactggccgtgatcagcctgtaaatataagtgaacagggggaatgaagtgaaaagaagcttatgcagtggaagaaggatgt
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| CDS seq | atggttcttggagggtggctgttgatgtgggctccggcctcatcgccaacaatcctcgtggcgttcggtctcctcttcggcctcgtcctcgcgtggcaggccggcctccagctccaccgcctgtggtggcggccgcggcggctggagaaggcgctgcgggcgcggggcctccgcggctcgtcctaccgcttcctcaccggcgacctcgcggaggagagccggcggaggaaggaggcctgggcgaggccgctgccgctgcggtgccacgacatcgcgccgcgcatcgagccgttcctccacgacgccgtcgtcaggccggagcagcactacggcaagccgtgcatcacctggctcggcccgacgccggaggtgcacgtcaccgatcccgagctggccaaggtcgtcatgtccaacaagttcggccacttcgagaagatcaggttccaggcgctatcgaagctgctgccccagggcctctcctaccacgagggcgagaagtgggccaagcacaggaggatcctcaacccggctttccagctcgagaagctcaagctcatgctgccggtgttttctgcgtgctgcgaggagctgatcagcaggtggatgggggccattggttctgatggctcgtacgaggtggattgctggccggagctcaagagcctcaccggagatgtcatctcacgcaccgcgttcggaagcagctatcttgaaggaagaaggatcttcgagctgcagggcgagctatttgagcgtgtaatgaaatccgtcgagaagattttcatcccgggttacatgtatttgcctactgagaacaaccggaagatgcatcaaattaataaagagatcgaatcgattctaaggagtatgattgggaaaagaatgcaagctatgaaagaaggtgaaagcacaaaagatgatttacttggcatattgcttgagtcaaacatgagacacacggaagagaatagtcaatcaagccagggcttgacaatcaaggatatcatggaggaatgcaagttgttctactttgcaggagcggatacaacatcagtgcttctcacatggaccatattgctattaagcatgcaccccgagtggcaggatcgtgcaaggaaagagatcctaggactatttgggaagaacaaacctgagtacgatggcttgagccacctcaaaattgtgacaatgatcctctacgaggttcttaggttgtacccaccgttcatcgagcttaagcggagaacatacaaggagatgaagataggaggtgtcacttaccctgctggtgtcatcattaatcttcccgtgctgttcatccaccatgatctggaaatctggggaagtgatgtgcatgagttcaaaccagagaggttctctgaggggatctctaaggcgtctaaggatccgggtgcgttcctcccatttggttggggaccgcgaatctgcatcggccaaaacttcgcgttgcttgaggccaagatggcgttgtgtctgattcttcaacgcttggagtttgagcttgcgccaacgtacactcatgcgccacatactatgataactttacacccgatgcatggtgcacagattaaaattagggctatatga
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| Protein seq | MVLGGWLLMWAPASSPTILVAFGLLFGLVLAWQAGLQLHRLWWRPRRLEKALRARGLRGSSYRFLTGDLAEESRRRKEAWARPLPLRCHDIAPRIEPFLHDAVVRPEQHYGKPCITWLGPTPEVHVTDPELAKVVMSNKFGHFEKIRFQALSKLLPQGLSYHEGEKWAKHRRILNPAFQLEKLKLMLPVFSACCEELISRWMGAIGSDGSYEVDCWPELKSLTGDVISRTAFGSSYLEGRRIFELQGELFERVMKSVEKIFIPGYMYLPTENNRKMHQINKEIESILRSMIGKRMQAMKEGESTKDDLLGILLESNMRHTEENSQSSQGLTIKDIMEECKLFYFAGADTTSVLLTWTILLLSMHPEWQDRARKEILGLFGKNKPEYDGLSHLKIVTMILYEVLRLYPPFIELKRRTYKEMKIGGVTYPAGVIINLPVLFIHHDLEIWGSDVHEFKPERFSEGISKASKDPGAFLPFGWGPRICIGQNFALLEAKMALCLILQRLEFELAPTYTHAPHTMITLHPMHGAQIKIRAI |
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| Function | Cytochrome P450 72A15 [UniProtKB/Swiss-Prot:Q9LUC5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_01g0023310 | OsLima_01g0023310.02 | Chr01 | 24979453 | 24982173 | - | NAM | ||
| CDS seq | atggttcttggagggtggctgttgatgtgggctccggcctcatcgccaacaatcctcgtggcgttcggtctcctcttcggcctcgtcctcgcgtggcaggccggcctccagctccaccgcctgtggtggcggccgcggcggctggagaaggcgctgcgggcgcggggcctccgcggctcgtcctaccgcttcctcaccggcgacctcgcggaggagagccggcggaggaaggaggcctgggcgaggccgctgccgctgcggtgccacgacatcgcgccgcgcatcgagccgttcctccacgacgccgtcgtcaggccggagcagcactacggcaagccgtgcatcacctggctcggcccgacgccggaggtgcacgtcaccgatcccgagctggccaaggtcgtcatgtccaacaagttcggccacttcgagaagatcaggttccaggcgctatcgaagctgctgccccagggcctctcctaccacgagggcgagaagtgggccaagcacaggaggatcctcaacccggctttccagctcgagaagctcaagctcatgctgccggtgttttctgcgtgctgcgaggagctgatcagcaggtggatgggggccattggttctgatggctcgtacgaggtggattgctggccggagctcaagagcctcaccggagatgtcatctcacgcaccgcgttcggaagcagctatcttgaaggaagaaggatcttcgagctgcagggcgagctatttgagcgtgtaatgaaatccgtcgagaagattttcatcccgggttacatgtatttgcctactgagaacaaccggaagatgcatcaaattaataaagagatcgaatcgattctaaggagtatgattgggaaaagaatgcaagctatgaaagaaggtgaaagcacaaaagatgatttacttggcatattgcttgagtcaaacatgagacacacggaagagaatagtcaatcaagccagggcttgacaatcaaggatatcatggaggaatgcaagttgttctactttgcaggagcggatacaacatcagtgcttctcacatggaccatattgctattaagcatgcaccccgagtggcaggatcgtgcaaggaaagagatcctaggactatttgggaagaacaaacctgagtacgatggcttgagccacctcaaaattgtgacaatgatcctctacgaggttcttaggttgtacccaccgttcatcgagcttaagcggagaacatacaaggagatgaagataggaggtgtcacttaccctgctggtgtcatcattaatcttcccgtgctgttcatccaccatgatctggaaatctggggaagtgatgtgcatgagttcaaaccagagaggttctctgaggggatctctaaggcgtctaaggatccgggtgcgttcctcccatttggttggggaccgcgaatctgcatcggccaaaacttcgcgttgcttgaggccaagatggcgttgtgtctgattcttcaacgcttggagtttgagcttgcgccaacgtacactcatgcgccacatactatgataactttacacccgatgcatggtgcacagattaaaattagggctatatga
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| Protein seq | MVLGGWLLMWAPASSPTILVAFGLLFGLVLAWQAGLQLHRLWWRPRRLEKALRARGLRGSSYRFLTGDLAEESRRRKEAWARPLPLRCHDIAPRIEPFLHDAVVRPEQHYGKPCITWLGPTPEVHVTDPELAKVVMSNKFGHFEKIRFQALSKLLPQGLSYHEGEKWAKHRRILNPAFQLEKLKLMLPVFSACCEELISRWMGAIGSDGSYEVDCWPELKSLTGDVISRTAFGSSYLEGRRIFELQGELFERVMKSVEKIFIPGYMYLPTENNRKMHQINKEIESILRSMIGKRMQAMKEGESTKDDLLGILLESNMRHTEENSQSSQGLTIKDIMEECKLFYFAGADTTSVLLTWTILLLSMHPEWQDRARKEILGLFGKNKPEYDGLSHLKIVTMILYEVLRLYPPFIELKRRTYKEMKIGGVTYPAGVIINLPVLFIHHDLEIWGSDVHEFKPERFSEGISKASKDPGAFLPFGWGPRICIGQNFALLEAKMALCLILQRLEFELAPTYTHAPHTMITLHPMHGAQIKIRAI
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_01g0023310 | OsLima_01g0023310.01 | Chr01 | 24979402 | 24982173 | - | NAM | ||
| CDS seq | atggttcttggagggtggctgttgatgtgggctccggcctcatcgccaacaatcctcgtggcgttcggtctcctcttcggcctcgtcctcgcgtggcaggccggcctccagctccaccgcctgtggtggcggccgcggcggctggagaaggcgctgcgggcgcggggcctccgcggctcgtcctaccgcttcctcaccggcgacctcgcggaggagagccggcggaggaaggaggcctgggcgaggccgctgccgctgcggtgccacgacatcgcgccgcgcatcgagccgttcctccacgacgccgtcgtcaggccggagcagcactacggcaagccgtgcatcacctggctcggcccgacgccggaggtgcacgtcaccgatcccgagctggccaaggtcgtcatgtccaacaagttcggccacttcgagaagatcaggttccaggcgctatcgaagctgctgccccagggcctctcctaccacgagggcgagaagtgggccaagcacaggaggatcctcaacccggctttccagctcgagaagctcaagctcatgctgccggtgttttctgcgtgctgcgaggagctgatcagcaggtggatgggggccattggttctgatggctcgtacgaggtggattgctggccggagctcaagagcctcaccggagatgtcatctcacgcaccgcgttcggaagcagctatcttgaaggaagaaggatcttcgagctgcagggcgagctatttgagcgtgtaatgaaatccgtcgagaagattttcatcccgggttacatgtatttgcctactgagaacaaccggaagatgcatcaaattaataaagagatcgaatcgattctaaggagtatgattgggaaaagaatgcaagctatgaaagaaggtgaaagcacaaaagatgatttacttggcatattgcttgagtcaaacatgagacacacggaagagaatagtcaatcaagccagggcttgacaatcaaggatatcatggaggaatgcaagttgttctactttgcaggagcggatacaacatcagtgcttctcacatggaccatattgctattaagcatgcaccccgagtggcaggatcgtgcaaggaaagagatcctaggactatttgggaagaacaaacctgagtga
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| Protein seq | MVLGGWLLMWAPASSPTILVAFGLLFGLVLAWQAGLQLHRLWWRPRRLEKALRARGLRGSSYRFLTGDLAEESRRRKEAWARPLPLRCHDIAPRIEPFLHDAVVRPEQHYGKPCITWLGPTPEVHVTDPELAKVVMSNKFGHFEKIRFQALSKLLPQGLSYHEGEKWAKHRRILNPAFQLEKLKLMLPVFSACCEELISRWMGAIGSDGSYEVDCWPELKSLTGDVISRTAFGSSYLEGRRIFELQGELFERVMKSVEKIFIPGYMYLPTENNRKMHQINKEIESILRSMIGKRMQAMKEGESTKDDLLGILLESNMRHTEENSQSSQGLTIKDIMEECKLFYFAGADTTSVLLTWTILLLSMHPEWQDRARKEILGLFGKNKPE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr01 | 24979932 | 24980069 | - | OsLima_01g0023310.02 | OsLima_01g0023310.01,OsLima_01g0023310.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.476392 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0602400 | RBH | 6.363934 | 4.809669 | 2.796535 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g41810 | SBH | 4.397040 | 3.310292 | 0.811658 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0602400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0024360 | SBH | 0.569233 | 0.0 | 0.714197 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0025650 | RBH | 0.089938 | 0.415210 | 0.324732 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0025980 | SBH | 0.343233 | 0.0 | 1.553312 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0023620 | SBH | 0.424099 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0023380 | SBH | 5.186004 | 2.093777 | 1.716186 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0421000 | SBH | 0.892174 | 1.455999 | 0.3114915 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0023300 | SBH | 0.546497 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0409800 | SBH | 1.3210485 | 4.3304605 | 0.3144385 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0024990 | RBH | 0.053336 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0023270 | SBH | 1.553524 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0023530 | RBH | 4.089728 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0023530 | RBH | 1.013698 | 0.0 | 0.484182 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0023450 | RBH | 0.515966 | 0.315297 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G025350 | SBH | 0.087947 | 0.756523 | 0.201044 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0023340 | RBH | 3.943024 | 0.0 | 3.199972 |
