Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_11G0342300 | OGI:11062500 | 5/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr11:24416254-24418864 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGACGTCCCTCAGAGTCCTCAACATCACACATAACTACTACACGGACATCGTGGCACCAGGTTCGCTAAGAAGACTATATAGCTTGGAAATACTAAATATTGAGTCGTGCTACTTGTCCGCGAACATGACAGAGTTGCTTGAGATGCTATCACATGGTTCCAAGAAATTGCGGCAACTGAAGATGGCGATGAACGATATTAGTGGAACCCTACCTGTTGGGATGTTGCAACAGTTTGCTGACTTGGACATTCTCGACTTCAGAAATAATAATCTCACAGGGCATGTGTCCACTGAGATTGGCATGCTCACTAGTTTGACTTACATGGACTTGAGTCACAATAACCTATCTGGTGTCATCACAGAGGAACATTTTGCTAGCCTAAAGAGACTAAAATACATGGACTTGTCCTATAATTCCTTGAGAATTGCTGTAGATCCTGGATGGATAGCCCCATTTAGATTACAGCATGCATGTTTTGCATCCTGCCAGATGGGTCCTCAATTTCCTTCTTGGCTCCAGGGTCAAGTGGATATCACATACTTCGATATTTCAATTTTTGGTATAACCGATAAGCTTCCGGACCGATTTTGGACAACATTTTCAAAGGTCAAATATTTGGATTTCTCTAACAACGGAATAAGTGGTGCCTTGCCAACAAATATGGAAAACATGCCAATGGAATATCTTCAGCTAGGTTCAAATCAAATAAGTGGTCAAATACCTCCGTTGCCAAGAAACATTACACTATTGGATGTGTCCAATAATTCTCTACAGGGACCTCTGCCATCTGAACTAATAGTACCTCAAAATCACATGGAAGTGCTGATTCTTTCCTCCAACAAACTATCAGGCCGTATTCCAAGGTCTCTTTGCAGAATGCAATACTTAAACACCTTGGACTTAGCAAATAATTGTTGGAATTAATGAATGGGCCTTAGCCCACTCGAAGATTAATTCTTTGGAAAATCACAAAAGCCCACCTCATGGGATGACATGCATATGGAGTTTAGTACCACCTTGCTTATTCTAGAAGAGGGGGACCTCCTTAAAAGGGAGGATGCCCTCCTAGTCACTTAAAGCATGTGTGGTGGAGAGAAGAGGGGAAACACACGCGCGCGCTCGTTCGCCTGGCCGGGCCGGGCCGGCGGCGCGCGTGCACGACGTACGCGTCGAATGGTCCGAAAAATTGGCTCCTCACCCTTGCGCAGATGTAGCCTCCTTTTGCAGTTTTGTTTTGCTGCAAATTCGGATTCGTTTTTGTTTTGGAAACATTCCGAAAAATCCGGTGCGTGCAAACGGCTTGGAGTCCGGATAAGTTACGCGCGACTTATCCGGTTTGGTTACGCGTAGTAGAGATCGTGCGGGCGCCCTGATCAAGCGACCCTTCTCTATATAAACCGACCTGCCGTCTTCACGCAAAAGAGCGAAATCAATCTAGGGTTTGCCTCCTACTCTGTACTTCGCCGTCGCTCGTATACTACTCCATCCCGCTCGCCGGCGTGCACCGGTGATCGGGAGAGCAGGTCTCCAGAACCTCTGCCTTCGACGTCCTGCATCGGGAGAAGGCGGCAATAAGGTTTTTGGGAAGTGCTTCGCGCGACTGCTCCCTGTTCGTTCGCGACGGCTCGCCTTCCTCTTCGCTCGCGTGGTTCGTGCCTTCGTAGACACCTGCGAAAAGTTTCGACCAAGTAGCCGGTCTTTCCGTCACCTCGGTACGTGTTCAATATGCGCAATGTTGCGCATATTTGATCTGTTCATGTTATACTGTGTAGTTTACATGTGTAGATCTAATGATGCGTTCCTGCTAGTTTTCATCAGTAATGTCATGATTTATTTATGGAATAGATTAAATCATTATATGTCTATAATGTCAACAATAATATTTTTAGGGGAGATTTTCCATGTTTTGGGTTGAAAAATGTAGAAGTTCTTCTTTTAAGTAATAACCGTTTCTCTGGCACCTTCCCAGCTTTTCTAGAACGCTGCACACAGCTACTAGTCATAGATCTATCAAGGAACAATTTCTCCGGTAAATTACCGATGTGGATTGGAGACAAGGAGAAATTATTGTTTTTGCGACTAAGCTACAATGCTTTCTCTGGGTTTATTCCAGCCAATTTCACAAATCTTAAGAATCTTTGTCATTTGGACCTTGCAAGCAATAATTTATCGGGTAATATTCCTTGGGGTTTGTCAAATTTAGAGGCTATGAAGAAAGGATCATCCATTGTTGTTCAGATCTACATATCTTAAGAATATTATAGTAGTCTGTCTGTGGTCACAAAGAGGCAAGAACTTTATTATGGCTCAACAATTTAGGACATTGCGAGCATTGATTAATTTTTCCTCAAATTACTTAGTTGGTGCAATTCCAGGAGAAATATCTTCGCTCGCACAGCTAAAAAATCTGAATTTATCGAGGAATTACTTGAGTGGGAAAATTCCAGATAAGATTGGGTCCTCACAGTCACTAGAATCGCTTGACCTCTCAAGGAACAAGCTTTCTGGGGAAATTCCGCTTAGCCTGTCGAATTTATCATATTTGGGCGACTTGGATTTGTCGCACAATAATCTTTCAGGAAAGAATACCATCAGGATCACAACTTGA
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| CDS seq | ATGACGTCCCTCAGAGTCCTCAACATCACACATAACTACTACACGGACATCGTGGCACCAGGTTCGCTAAGAAGACTATATAGCTTGGAAATACTAAATATTGAGTCGTGCTACTTGTCCGCGAACATGACAGAGTTGCTTGAGATGCTATCACATGGTTCCAAGAAATTGCGGCAACTGAAGATGGCGATGAACGATATTAGTGGAACCCTACCTGTTGGGATGTTGCAACAGTTTGCTGACTTGGACATTCTCGACTTCAGAAATAATAATCTCACAGGGCATGTGTCCACTGAGATTGGCATGCTCACTAGTTTGACTTACATGGACTTGAGTCACAATAACCTATCTGGTGTCATCACAGAGGAACATTTTGCTAGCCTAAAGAGACTAAAATACATGGACTTGTCCTATAATTCCTTGAGAATTGCTGTAGATCCTGGATGGATAGCCCCATTTAGATTACAGCATGCATGTTTTGCATCCTGCCAGATGGGTCCTCAATTTCCTTCTTGGCTCCAGGGTCAAGTGGATATCACATACTTCGATATTTCAATTTTTGGTATAACCGATAAGCTTCCGGACCGATTTTGGACAACATTTTCAAAGGTCAAATATTTGGATTTCTCTAACAACGGAATAAGTGGTGCCTTGCCAACAAATATGGAAAACATGCCAATGGAATATCTTCAGCTAGGTTCAAATCAAATAAGTGGTCAAATACCTCCGTTGCCAAGAAACATTACACTATTGGATGTGTCCAATAATTCTCTACAGGGACCTCTGCCATCTGAACTAATAGTACCTCAAAATCACATGGAAGTGCTGATTCTTTCCTCCAACAAACTATCAGGCCCTTTTCTAGAACGCTGCACACAGCTACTAGTCATAGATCTATCAAGGAACAATTTCTCCGGTAAATTACCGATGTGGATTGGAGACAAGGAGAAATTATTGTTTTTGCGACTAAGCTACAATGCTTTCTCTGGGTTTATTCCAGCCAATTTCACAAATCTTAAGAATCTTTGTCATTTGGACCTTGCAAGCAATAATTTATCGGTCTGTCTGTGGTCACAAAGAGGCAAGAACTTTATTATGGCTCAACAATTTAGGACATTGCGAGCATTGATTAATTTTTCCTCAAATTACTTAGTTGGTGCAATTCCAGGAGAAATATCTTCGCTCGCACAGCTAAAAAATCTGAATTTATCGAGGAATTACTTGAGTGGGAAAATTCCAGATAAGATTGGGTCCTCACAGTCACTAGAATCGCTTGACCTCTCAAGGAACAAGCTTTCTGGGGAAATTCCGCTTAGCCTGTCGAATTTATCATATTTGGGCGACTTGGATTTGTCGCACAATAATCTTTCAGGAAAGAATACCATCAGGATCACAACTTGA
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| Protein seq | MTSLRVLNITHNYYTDIVAPGSLRRLYSLEILNIESCYLSANMTELLEMLSHGSKKLRQLKMAMNDISGTLPVGMLQQFADLDILDFRNNNLTGHVSTEIGMLTSLTYMDLSHNNLSGVITEEHFASLKRLKYMDLSYNSLRIAVDPGWIAPFRLQHACFASCQMGPQFPSWLQGQVDITYFDISIFGITDKLPDRFWTTFSKVKYLDFSNNGISGALPTNMENMPMEYLQLGSNQISGQIPPLPRNITLLDVSNNSLQGPLPSELIVPQNHMEVLILSSNKLSGPFLERCTQLLVIDLSRNNFSGKLPMWIGDKEKLLFLRLSYNAFSGFIPANFTNLKNLCHLDLASNNLSVCLWSQRGKNFIMAQQFRTLRALINFSSNYLVGAIPGEISSLAQLKNLNLSRNYLSGKIPDKIGSSQSLESLDLSRNKLSGEIPLSLSNLSYLGDLDLSHNNLSGKNTIRITT |
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| Function | Receptor-like protein EIX2 [UniProtKB/Swiss-Prot:Q6JN46] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_11G0342300 | OsZS97_11T0342300.1 | Chr11 | 24416254 | 24418864 | + | makerRMon | ||
| CDS seq | ATGACGTCCCTCAGAGTCCTCAACATCACACATAACTACTACACGGACATCGTGGCACCAGGTTCGCTAAGAAGACTATATAGCTTGGAAATACTAAATATTGAGTCGTGCTACTTGTCCGCGAACATGACAGAGTTGCTTGAGATGCTATCACATGGTTCCAAGAAATTGCGGCAACTGAAGATGGCGATGAACGATATTAGTGGAACCCTACCTGTTGGGATGTTGCAACAGTTTGCTGACTTGGACATTCTCGACTTCAGAAATAATAATCTCACAGGGCATGTGTCCACTGAGATTGGCATGCTCACTAGTTTGACTTACATGGACTTGAGTCACAATAACCTATCTGGTGTCATCACAGAGGAACATTTTGCTAGCCTAAAGAGACTAAAATACATGGACTTGTCCTATAATTCCTTGAGAATTGCTGTAGATCCTGGATGGATAGCCCCATTTAGATTACAGCATGCATGTTTTGCATCCTGCCAGATGGGTCCTCAATTTCCTTCTTGGCTCCAGGGTCAAGTGGATATCACATACTTCGATATTTCAATTTTTGGTATAACCGATAAGCTTCCGGACCGATTTTGGACAACATTTTCAAAGGTCAAATATTTGGATTTCTCTAACAACGGAATAAGTGGTGCCTTGCCAACAAATATGGAAAACATGCCAATGGAATATCTTCAGCTAGGTTCAAATCAAATAAGTGGTCAAATACCTCCGTTGCCAAGAAACATTACACTATTGGATGTGTCCAATAATTCTCTACAGGGACCTCTGCCATCTGAACTAATAGTACCTCAAAATCACATGGAAGTGCTGATTCTTTCCTCCAACAAACTATCAGGCCCTTTTCTAGAACGCTGCACACAGCTACTAGTCATAGATCTATCAAGGAACAATTTCTCCGGTAAATTACCGATGTGGATTGGAGACAAGGAGAAATTATTGTTTTTGCGACTAAGCTACAATGCTTTCTCTGGGTTTATTCCAGCCAATTTCACAAATCTTAAGAATCTTTGTCATTTGGACCTTGCAAGCAATAATTTATCGGTCTGTCTGTGGTCACAAAGAGGCAAGAACTTTATTATGGCTCAACAATTTAGGACATTGCGAGCATTGATTAATTTTTCCTCAAATTACTTAGTTGGTGCAATTCCAGGAGAAATATCTTCGCTCGCACAGCTAAAAAATCTGAATTTATCGAGGAATTACTTGAGTGGGAAAATTCCAGATAAGATTGGGTCCTCACAGTCACTAGAATCGCTTGACCTCTCAAGGAACAAGCTTTCTGGGGAAATTCCGCTTAGCCTGTCGAATTTATCATATTTGGGCGACTTGGATTTGTCGCACAATAATCTTTCAGGAAAGAATACCATCAGGATCACAACTTGA
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| Protein seq | MTSLRVLNITHNYYTDIVAPGSLRRLYSLEILNIESCYLSANMTELLEMLSHGSKKLRQLKMAMNDISGTLPVGMLQQFADLDILDFRNNNLTGHVSTEIGMLTSLTYMDLSHNNLSGVITEEHFASLKRLKYMDLSYNSLRIAVDPGWIAPFRLQHACFASCQMGPQFPSWLQGQVDITYFDISIFGITDKLPDRFWTTFSKVKYLDFSNNGISGALPTNMENMPMEYLQLGSNQISGQIPPLPRNITLLDVSNNSLQGPLPSELIVPQNHMEVLILSSNKLSGPFLERCTQLLVIDLSRNNFSGKLPMWIGDKEKLLFLRLSYNAFSGFIPANFTNLKNLCHLDLASNNLSVCLWSQRGKNFIMAQQFRTLRALINFSSNYLVGAIPGEISSLAQLKNLNLSRNYLSGKIPDKIGSSQSLESLDLSRNKLSGEIPLSLSNLSYLGDLDLSHNNLSGKNTIRITT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0565000 | SBH | 0.0 | 0.162735 | 0.194243 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g36090 | SBH | 0.0 | 0.0 | 0.090304 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0565000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0017830 | SBH | 0.128877 | 6.788608 | 1.696541 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0017830 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0017770 | SBH | 0.164332 | 9.540369 | 4.595458 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0017290 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0017610 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0330200 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0018270 | SBH | 0.040696 | 0.0 | 0.079613 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0018080 | SBH | 0.068635 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0018010 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0017710 | SBH | 0.429796 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0017080 | SBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0017350 | SBH | 0.024961 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G017720 | SBH | 0.042523 | 0.0 | 0.112282 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0017850 | RBH | 0.0 | 0.0 | 0.0 |
