Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsZS97_11G0052200 | OGI:11009080 | 16/16 | Zhenshan 97 | ZS97RS3 | HZAU | Chr11:3136014-3142074 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCCGGAGAGGAAGAAGGTGGTTTGACGGAGGCGAGCACGGTGGCTGCATTTCTCGGCGTTCCCTGGGATTCTCATCGGAGGCCGCCGGATTCAGTGTTCGCTCCGGTCAATCGCCGCCGCGCCCCCAGGTGAGTCGACACCTCTGGAGCTTTGGATCTCGCTCTGTTCATCTTCTTTGGCTGGATCAGGATTTAAACGCATTATTCCATTATTCCTTCGTTCTTGATAAGGTGGCTTGAACAACTTAAGGAGTTATTACCATTTACTCTGTTACAAAGTTAAGGAATTTACTCAAGGTGTAAGCACTTTGAACCTCACTACAAATGGTACTGTTTGTAAGCACATTGAAAAATATCTTCCTCTTGGAAGGTTGAGCACAAACTATTTTACACCTGAATGCATGTAAATTCATGTCTATTTCACAGGAAAGTAAGGAACATAGCTGTTAAATCATATCTAATTTACCTTTTCGTAAATGAAGGAATTACAGCTTTGACAATTGACGGACCTCATACTGCAAAAGGCTGGATGTGCCTTTCACCAATTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGATAACCTATTCACCAATTCTCACCACTACTGCAAGCTATTCAGATAGTTCAGGTCAAACTGGTATATGTGTCTGTCCTCTATGTCTGTATCTAATAAGTGTTTGATTTTTGAAAAAAAAGTTCCGTTGTATCTGCTTTTATTAATTTGGATAGTTAAAAACAGTCAGTTACTATTGCTGCTCTGACTAGCACTATATTCATGAAAAAAACCATTTGAAAAGAAACTACTTTATGCTTCTGAGTTCTGACAGTGGTGTCCTCATACGAACAATTCAACGTACAATGATATCTGTTAGTGCCTAATGTAAACCTGAAAATGCATTGTCTTACTTTTTGAAGAGAAAATTCTGGCTCAGGAAGAGCCATCTCGTGTGAACTGCTTCCAGTACTTGTTACTAATTTCTTGTAGACTTGTATTGTTCTCTTTGCCTACTTCTTTGTAACCTCTAGAAGCCTGATCACTTTGCAAACTCCCATTTTGACCTCCAACAGAGCTCTGGTTAGCATGGAGATTATGATTTCTGCTGTGGCAGGTGATCTTATCAGCCGGTTCATCTCTTCGGTAGCACAAAATTACAGAAACCATATACGTAAGGAGGATGATCGTAGGAGGCTGGAACGCATCTTGCTGAGGATGCACTGTGTTGTTGAGGAAGCAGAGGGGCGCCACATCACAAATCAAGGAATGCTCCTGCAGCTAAAGGGATTTATTGAGGGATTCTACCTCGGATACTACGTGCTCGACAAGATCAAGTTCCAACCCCCTGAAGAAGAAAGCATCGAAGATGAGGTGAGTCATGAGATTCAGTCATTTGCCTTGTCAGCCTGTAACTCTCGCAAGCGCTTTCGTTTTGCTGATGCCATAAGAAAACACACACCAATAGCCTTTGGTAGCAGGAGCAGAACAAACCTGAAAGATGTTGTTGATGGTTTAGAAACTAAGATTGCAGATATGAGGGAATTTGTCATTCTCCTTGGTAGCCACCCTCGTCTACCACGTCAGCCTTACAGTACATATCTATACATAGAGAATTGTATGTTTGGCAGCCGTATTGAGAAGGAGCAAGTCATCAATTTCTTGCTTTGCAATGATCCTCATGATCCGTATGTTAGCATTCTTCCTATTATTGGCCCACCAAGGATTGGAAAGAAAACTCTTGTGCAACATGCTTGCCTGGATGAGAGGGTGCGCAACTGCTTCTCCCATATATTTTTCTTTAAAGAAGACGATCTGAAGACCGGAGAGCTCTCGCTTAACTCCAAGGCTTCTCAAGGGAAATATTTGTTTGTTATTGAGTTCATTTGGGATGTGGATGAGGCAGCTTGGACAAAATTCCAATCATATTTGCAGAATATGCCCGGTATTGGAATTAAGGTTGTAGTGATAGGTACAACAGAGGACATTGCTAAGTTTGGGACAACCCAACCCATCAGGGTGAAGAGGCCATCCGAAGAAGAGTTTTGGTACTACTTCAAGGCACTTGCTTTTGGAAGTATGGATCCTGATGAACATCCGAAACTAGCATCTCTGGTCATGCAGCTAGCTACTGAGATGAATGGATCATTTCTTTCTGCAACTATATATGGTGAACTATTAAGAGCTAATCCTAACACTCAATTCTGGAAGAGAATCTTATTATTCGTAAGAGAGCTTGCACGGAAGCACTTGACTTCCTCTGGTCTACACCCTGACGATCTTTTCGAAAGAAATATCCCTGTCGATATGAGCAGGATAGCCGTTGTGGATGGTCAAGTTCAAGGTTGCCTGCTTTATGATGTTAGGGTCGCTGGCCCTGCAGATGGTGAGCTACCAAAACTGACATCACGAGACATGCTACTGGGTTGTGATATTCCTGTCGAAGATAAGTTTGATGTGCTGGTCTGGAGATCTCGCATTCCACCCTACTGTAACTACATAGTTACGTATGAGAAACGAAAACCGCGACGCATGGTTCGTAAGAGGAACACGATCTACCTCTGAGAATACACAGACACAAATCTTAATCTGGGGGAAAATTTTCTAGAAAGAATACATTGTCTACGCTTTGACAATATAGTTTAGAAGGCTGGGTATGCCTTCACAGATTCTAGCTACTACTGATTATTCAGACAGTTTAGGTGAAAGGAGCATATGTCATACTATTGTAGTTTCATGGATGTCTTCATTCTTGGAGAACTGCTATTGTATCTGTTCTTACTAGTTTGGGTATGTATAATTCAGTTAGTTACTATTGCTACCCTGCTAGCGTCATGTGTGTGACAGAATAGTTCACAAAAGAAGCTACTTTCTGTTTCTGAATTCTGACTTTGATGTCCTGTGTATGACCAATTTAATGTACAACAATATATGTAGTTTCAGTGCCTTCCATCGGTTGGTTCCATCATAGTCACTGCTCTTTCCTTTCTATATTCCAACTACTTTAATGATATGTTTGTTTACAGGAATTCGGTTAGATTAATTTCTTCCTGATTTGGTCTCGCAAATTCGAAGAGGACATGCTCATCTCTGTAGTTGCAAAATTGATCATGTCAGCCATTTCATCTCCTTGCAGAATTCAGACAATAAGGAGGACCTTGAGAAGATGATGAGTGTCCTAAAGATCCACCACCATCACAAACTGAGGAATGTTTTTCCAGTTCAAGGGGCCTATGGTAGGTATGTACCCTGGGTATTATTCTTACACATCAAAGTTGCAGCCTGTTGAAGAGGCTGTAGTTGAAAATCATTGTCACAAGTGACTTTGTTCTCAGTGAGATCAATTCTTCTTTAGAGAAAAGGGCAGGAGCTCTGCCGTGATGCATTATAGAAGAAAGATAGCAAAGACTAAATGTGGTTACAAGGCACACTACATGCTGAGGTTTGATAAACTCAATGGACAAAGGCCAAAACCAAACCCACAGCAGCCCCTAAGGCCAGCAACTAAGAAACTAAGAAACTGGGTATCTCTCTTTTTTGCTTGATCTCCTAGATCTTGAAGTGGACATCTCGCAAAATCCGGTGTTCATTTTGGAGGGCTCATTTATTTCCTCTCCTTTCAAATATTCCAACATGTGTACACCACCAGGGCTGTTGAACTTCCTCTCCCATCTCTTTTTTGCTTTCATGCCACCAGCTCGCAAAACTGTCAAAAAGTTTTGGCTGGGCTCTCTCCATGATTTTGCAATTTACCACCTTAGAACAATGTCCAAACTTCCTTGGCATAAGGACAAAGAATAAGAAAATGCACGTTAGCCTTCCATGTTGGTTGCAAAGCTTAGAGATCACATGGTTTGACCATCCTTGTTTAGCCAAGATTATCGGCTTTTAAGATTTTGTTTTGATTTGAATTCCAAGCAAATAATTTACATTTGTTTTCAGACGTCTTCCAAATAGATGTTGTGTTGAGATTTCTGAGGTAACCTTTGAATTCCACAAGGAAGACTGACTTTTGTGCAATATTGCCACACCGTACTCCTTGTTGACAGGCTGAAGGCAAATGGTTTTGTATTTTATTCCAAAGCCACACTACATACTCCTTGTTCACACAAATTCTGGGTCGTGCGGATTTTCCTCACATAATATATCCAATTATTGTTTGCAAGTTCTTTCCGCATGGGCCTATTACTCTATTTTATCTGGTAACCGGTAAGAACAATAACTTTGTTCTGGGTGGATAAATGGATGATGGGGTTCATGATAAAAGCATTGACCTGTCGTCTCCTTTTGCAGAATTGGTTTATTTTGCAGAAAAGGGGACAAACAAAGAAATACTTTCATGGGGCCCTGGCTACTAGAACAAATTGTAAATGAAAGCTTTGATGCTAAACGAGGATGATGGAGGGAGAAGCTACTTTGGTAGGAGATAGACTGAACATGTAGAACCCTTCTCTGGTGATAATAATAGACTTTAATTTCTTGTTGACTTGTCTTGGTCTCTTGGCCTACTTCTTTGTAACCTTCTAGATTCTAGAAGCCTGGGTCACTTTGCAAACTCCCATTTTGACCATTTGCTTCCAAGCAGAGCTCTGGTGAGCATGGAGATTCTGATTTCTGCTGTGGCAACTGATCTTATCAGCCGGTTCATCTCTTCGGTAACACAAAATTACAGAAACCATATACATAAGGAGGATGATCGTAGGAGGCTGGAACGCATCTTGCTGAGGATGCACTCTGTTGTTGAGGAAGCAGGGGGACGCCATATCACAAATCAAGGAATGATCCTGCAGCTAAAGGGACTTGTTGAGGGATTCTACCTCGGATACTACATGCTCGACAAAATCAAGTTCCAACCCCCCGAATATGAGGTGAGTCATGAGATTCAGTCATTTGCCTTGTCTGCCTGTAACTCTGCCAAGCGCTTTCGTTTTGCTGATGCCATAAGCAAACGCACACCAGTAGCCTTTGGTAGCAGGAGCAGAACAAACCTGAAAGATGTTGTTGATGGTTTAGAAACTAAGATTGCAGATATGAGGGAATTTGTCATTCTCCTTGGTAGCCACCCTCGTCTACCACGCCAGCCTTACAGTACATATCTATACATAGATAACTGTATGTTCGGTCGCCGTATTGAGAAGGAGCAAGTCATCAATTTCTTGCTTTGCAATGATCCTGATGATCCATCTGTTAGCATTCTTCCTATTCTTGGCCCACCAAGGATGGGAAAGAAAACTCTTGTGCAACATGCTTGCCTGGATGAGAGGGTGCGCGACTGCTTCTCCCATATATTTTTCTTTAAAGAAGACGATCTGAAGACCGGAGAGCTCTCGCTTAACTCCAAGGCTTCTGAAGGGAAATATTTGTTTGTTATTGAGTTCATTTGGGATGTGGATGAGGCAGCTTGGACAAAATTCCAATCATATTTGCAGAATATTCCCGGTATTGGAATTAAGGTTGTAGTGATAGGTACAACAGAGGACATTGCTAAGTTTGGGACAACCCAACCCATCAGGGTGAAGAGGCTATCTGAAGAAGAGTTTTGGTACTACTTCAAGGCACTTGCTTTTGGAAGTTTGGATCCTGATGAGCATCCAAAACTAGCATCTCTGGCCATGCAGCTATCTACTGAGATGAATGGATCGTTTCTTGGTGCAATTTTATATGGTGAACTATTAAGAGCTAATCCTAACACTCAATTCTGGAATAGAATCTTATTATTCTTAAGAGAGCTGGCACGGAAGCAATTGACTTCCTCTGGTCTACACCCTGAGGATCTTTTCGAAAGAAATATCCCTGTTGATATGAGCAGGCTAGCTGTTGTGGATGGTCAAGTTCAATGTTGCCTGGTTTATGATCTTAGGGTGGCTGGCCCTGCAGAAGGTGAGCTACCAAAGCTGACGTCACGAGACATGCTACTGGGTGGTGATATTCCTGTTGAAGATAAGTTTGATGTGCTGGTCTGGAGATCTCGCATTCCACCCTACTGTAACTACATAGTTACGTATGAGAAACGAAAACCGCGACGCATGGTTCGTAAGAGGAACACGATCTACCTCTGA
More
|
||||||||||
| CDS seq | ATGGCCGGAGAGGAAGAAGGTGGTTTGACGGAGGCGAGCACGGTGGCTGCATTTCTCGGCGTTCCCTGGGATTCTCATCGGAGGCCGCCGGATTCAGTGTTCGCTCCGGTCAATCGCCGCCGCGCCCCCAGAGCTCTGGTTAGCATGGAGATTATGATTTCTGCTGTGGCAGGTGATCTTATCAGCCGGTTCATCTCTTCGGTAGCACAAAATTACAGAAACCATATACGTAAGGAGGATGATCGTAGGAGGCTGGAACGCATCTTGCTGAGGATGCACTGTGTTGTTGAGGAAGCAGAGGGGCGCCACATCACAAATCAAGGAATGCTCCTGCAGCTAAAGGGATTTATTGAGGGATTCTACCTCGGATACTACGTGCTCGACAAGATCAAGTTCCAACCCCCTGAAGAAGAAAGCATCGAAGATGAGGTGAGTCATGAGATTCAGTCATTTGCCTTGTCAGCCTGTAACTCTCGCAAGCGCTTTCGTTTTGCTGATGCCATAAGAAAACACACACCAATAGCCTTTGGTAGCAGGAGCAGAACAAACCTGAAAGATGTTGTTGATGGTTTAGAAACTAAGATTGCAGATATGAGGGAATTTGTCATTCTCCTTGGTAGCCACCCTCGTCTACCACGTCAGCCTTACAGTACATATCTATACATAGAGAATTGTATGTTTGGCAGCCGTATTGAGAAGGAGCAAGTCATCAATTTCTTGCTTTGCAATGATCCTCATGATCCGTATGTTAGCATTCTTCCTATTATTGGCCCACCAAGGATTGGAAAGAAAACTCTTGTGCAACATGCTTGCCTGGATGAGAGGGTGCGCAACTGCTTCTCCCATATATTTTTCTTTAAAGAAGACGATCTGAAGACCGGAGAGCTCTCGCTTAACTCCAAGGCTTCTCAAGGGAAATATTTGTTTGTTATTGAGTTCATTTGGGATGTGGATGAGGCAGCTTGGACAAAATTCCAATCATATTTGCAGAATATGCCCGGTATTGGAATTAAGGTTGTAGTGATAGGTACAACAGAGGACATTGCTAAGTTTGGGACAACCCAACCCATCAGGGTGAAGAGGCCATCCGAAGAAGAGTTTTGGTACTACTTCAAGGCACTTGCTTTTGGAAGTATGGATCCTGATGAACATCCGAAACTAGCATCTCTGGTCATGCAGCTAGCTACTGAGATGAATGGATCATTTCTTTCTGCAACTATATATGGTGAACTATTAAGAGCTAATCCTAACACTCAATTCTGGAAGAGAATCTTATTATTCGTAAGAGAGCTTGCACGGAAGCACTTGACTTCCTCTGGTCTACACCCTGACGATCTTTTCGAAAGAAATATCCCTGTCGATATGAGCAGGATAGCCGTTGTGGATGGTCAAGTTCAAGGTTGCCTGCTTTATGATGTTAGGGTCGCTGGCCCTGCAGATGGTGAGCTACCAAAACTGACATCACGAGACATGCTACTGGGTTGTGATATTCCTGTCGAAGATAAGTTTGATGTGCTGAATTCAGACAATAAGGAGGACCTTGAGAAGATGATGAGTGTCCTAAAGATCCACCACCATCACAAACTGAGGAATGTTTTTCCAGTTCAAGGGGCCTATGGTAGAGAAAAGGGCAGGAGCTCTGCCGTGATGCATTATAGAAGAAAGATAGCAAAGACTAAATGTGGTTACAAGGCACACTACATGCTGAGACGTCTTCCAAATAGATGTTGTGTTGAGATTTCTGAGAATTGGTTTATTTTGCAGAAAAGGGGACAAACAAAGAAATACTTTCATGGGGCCCTGGCTACTAGAACAAATTATTCTAGAAGCCTGGGTCACTTTGCAAACTCCCATTTTGACCATTTGCTTCCAAGCAGAGCTCTGGTGAGCATGGAGATTCTGATTTCTGCTGTGGCAACTGATCTTATCAGCCGGTTCATCTCTTCGGTAACACAAAATTACAGAAACCATATACATAAGGAGGATGATCGTAGGAGGCTGGAACGCATCTTGCTGAGGATGCACTCTGTTGTTGAGGAAGCAGGGGGACGCCATATCACAAATCAAGGAATGATCCTGCAGCTAAAGGGACTTGTTGAGGGATTCTACCTCGGATACTACATGCTCGACAAAATCAAGTTCCAACCCCCCGAATATGAGGTGAGTCATGAGATTCAGTCATTTGCCTTGTCTGCCTGTAACTCTGCCAAGCGCTTTCGTTTTGCTGATGCCATAAGCAAACGCACACCAGTAGCCTTTGGTAGCAGGAGCAGAACAAACCTGAAAGATGTTGTTGATGGTTTAGAAACTAAGATTGCAGATATGAGGGAATTTGTCATTCTCCTTGGTAGCCACCCTCGTCTACCACGCCAGCCTTACAGTACATATCTATACATAGATAACTGTATGTTCGGTCGCCGTATTGAGAAGGAGCAAGTCATCAATTTCTTGCTTTGCAATGATCCTGATGATCCATCTGTTAGCATTCTTCCTATTCTTGGCCCACCAAGGATGGGAAAGAAAACTCTTGTGCAACATGCTTGCCTGGATGAGAGGGTGCGCGACTGCTTCTCCCATATATTTTTCTTTAAAGAAGACGATCTGAAGACCGGAGAGCTCTCGCTTAACTCCAAGGCTTCTGAAGGGAAATATTTGTTTGTTATTGAGTTCATTTGGGATGTGGATGAGGCAGCTTGGACAAAATTCCAATCATATTTGCAGAATATTCCCGGTATTGGAATTAAGGTTGTAGTGATAGGTACAACAGAGGACATTGCTAAGTTTGGGACAACCCAACCCATCAGGGTGAAGAGGCTATCTGAAGAAGAGTTTTGGTACTACTTCAAGGCACTTGCTTTTGGAAGTTTGGATCCTGATGAGCATCCAAAACTAGCATCTCTGGCCATGCAGCTATCTACTGAGATGAATGGATCGTTTCTTGGTGCAATTTTATATGGTGAACTATTAAGAGCTAATCCTAACACTCAATTCTGGAATAGAATCTTATTATTCTTAAGAGAGCTGGCACGGAAGCAATTGACTTCCTCTGGTCTACACCCTGAGGATCTTTTCGAAAGAAATATCCCTGTTGATATGAGCAGGCTAGCTGTTGTGGATGGTCAAGTTCAATGTTGCCTGGTTTATGATCTTAGGGTGGCTGGCCCTGCAGAAGGTGAGCTACCAAAGCTGACGTCACGAGACATGCTACTGGGTGGTGATATTCCTGTTGAAGATAAGTTTGATGTGCTGGTCTGGAGATCTCGCATTCCACCCTACTGTAACTACATAGTTACGTATGAGAAACGAAAACCGCGACGCATGGTTCGTAAGAGGAACACGATCTACCTCTGA
More
|
||||||||||
| Protein seq | MAGEEEGGLTEASTVAAFLGVPWDSHRRPPDSVFAPVNRRRAPRALVSMEIMISAVAGDLISRFISSVAQNYRNHIRKEDDRRRLERILLRMHCVVEEAEGRHITNQGMLLQLKGFIEGFYLGYYVLDKIKFQPPEEESIEDEVSHEIQSFALSACNSRKRFRFADAIRKHTPIAFGSRSRTNLKDVVDGLETKIADMREFVILLGSHPRLPRQPYSTYLYIENCMFGSRIEKEQVINFLLCNDPHDPYVSILPIIGPPRIGKKTLVQHACLDERVRNCFSHIFFFKEDDLKTGELSLNSKASQGKYLFVIEFIWDVDEAAWTKFQSYLQNMPGIGIKVVVIGTTEDIAKFGTTQPIRVKRPSEEEFWYYFKALAFGSMDPDEHPKLASLVMQLATEMNGSFLSATIYGELLRANPNTQFWKRILLFVRELARKHLTSSGLHPDDLFERNIPVDMSRIAVVDGQVQGCLLYDVRVAGPADGELPKLTSRDMLLGCDIPVEDKFDVLNSDNKEDLEKMMSVLKIHHHHKLRNVFPVQGAYGREKGRSSAVMHYRRKIAKTKCGYKAHYMLRRLPNRCCVEISENWFILQKRGQTKKYFHGALATRTNYSRSLGHFANSHFDHLLPSRALVSMEILISAVATDLISRFISSVTQNYRNHIHKEDDRRRLERILLRMHSVVEEAGGRHITNQGMILQLKGLVEGFYLGYYMLDKIKFQPPEYEVSHEIQSFALSACNSAKRFRFADAISKRTPVAFGSRSRTNLKDVVDGLETKIADMREFVILLGSHPRLPRQPYSTYLYIDNCMFGRRIEKEQVINFLLCNDPDDPSVSILPILGPPRMGKKTLVQHACLDERVRDCFSHIFFFKEDDLKTGELSLNSKASEGKYLFVIEFIWDVDEAAWTKFQSYLQNIPGIGIKVVVIGTTEDIAKFGTTQPIRVKRLSEEEFWYYFKALAFGSLDPDEHPKLASLAMQLSTEMNGSFLGAILYGELLRANPNTQFWNRILLFLRELARKQLTSSGLHPEDLFERNIPVDMSRLAVVDGQVQCCLVYDLRVAGPAEGELPKLTSRDMLLGGDIPVEDKFDVLVWRSRIPPYCNYIVTYEKRKPRRMVRKRNTIYL |
||||||||||
| Function | Disease resistance protein RGA2 [UniProtKB/Swiss-Prot:Q7XBQ9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsZS97_11G0052200 | OsZS97_11T0052200.1 | Chr11 | 3136014 | 3142074 | + | makerRMon | ||
| CDS seq | ATGGCCGGAGAGGAAGAAGGTGGTTTGACGGAGGCGAGCACGGTGGCTGCATTTCTCGGCGTTCCCTGGGATTCTCATCGGAGGCCGCCGGATTCAGTGTTCGCTCCGGTCAATCGCCGCCGCGCCCCCAGAGCTCTGGTTAGCATGGAGATTATGATTTCTGCTGTGGCAGGTGATCTTATCAGCCGGTTCATCTCTTCGGTAGCACAAAATTACAGAAACCATATACGTAAGGAGGATGATCGTAGGAGGCTGGAACGCATCTTGCTGAGGATGCACTGTGTTGTTGAGGAAGCAGAGGGGCGCCACATCACAAATCAAGGAATGCTCCTGCAGCTAAAGGGATTTATTGAGGGATTCTACCTCGGATACTACGTGCTCGACAAGATCAAGTTCCAACCCCCTGAAGAAGAAAGCATCGAAGATGAGGTGAGTCATGAGATTCAGTCATTTGCCTTGTCAGCCTGTAACTCTCGCAAGCGCTTTCGTTTTGCTGATGCCATAAGAAAACACACACCAATAGCCTTTGGTAGCAGGAGCAGAACAAACCTGAAAGATGTTGTTGATGGTTTAGAAACTAAGATTGCAGATATGAGGGAATTTGTCATTCTCCTTGGTAGCCACCCTCGTCTACCACGTCAGCCTTACAGTACATATCTATACATAGAGAATTGTATGTTTGGCAGCCGTATTGAGAAGGAGCAAGTCATCAATTTCTTGCTTTGCAATGATCCTCATGATCCGTATGTTAGCATTCTTCCTATTATTGGCCCACCAAGGATTGGAAAGAAAACTCTTGTGCAACATGCTTGCCTGGATGAGAGGGTGCGCAACTGCTTCTCCCATATATTTTTCTTTAAAGAAGACGATCTGAAGACCGGAGAGCTCTCGCTTAACTCCAAGGCTTCTCAAGGGAAATATTTGTTTGTTATTGAGTTCATTTGGGATGTGGATGAGGCAGCTTGGACAAAATTCCAATCATATTTGCAGAATATGCCCGGTATTGGAATTAAGGTTGTAGTGATAGGTACAACAGAGGACATTGCTAAGTTTGGGACAACCCAACCCATCAGGGTGAAGAGGCCATCCGAAGAAGAGTTTTGGTACTACTTCAAGGCACTTGCTTTTGGAAGTATGGATCCTGATGAACATCCGAAACTAGCATCTCTGGTCATGCAGCTAGCTACTGAGATGAATGGATCATTTCTTTCTGCAACTATATATGGTGAACTATTAAGAGCTAATCCTAACACTCAATTCTGGAAGAGAATCTTATTATTCGTAAGAGAGCTTGCACGGAAGCACTTGACTTCCTCTGGTCTACACCCTGACGATCTTTTCGAAAGAAATATCCCTGTCGATATGAGCAGGATAGCCGTTGTGGATGGTCAAGTTCAAGGTTGCCTGCTTTATGATGTTAGGGTCGCTGGCCCTGCAGATGGTGAGCTACCAAAACTGACATCACGAGACATGCTACTGGGTTGTGATATTCCTGTCGAAGATAAGTTTGATGTGCTGAATTCAGACAATAAGGAGGACCTTGAGAAGATGATGAGTGTCCTAAAGATCCACCACCATCACAAACTGAGGAATGTTTTTCCAGTTCAAGGGGCCTATGGTAGAGAAAAGGGCAGGAGCTCTGCCGTGATGCATTATAGAAGAAAGATAGCAAAGACTAAATGTGGTTACAAGGCACACTACATGCTGAGACGTCTTCCAAATAGATGTTGTGTTGAGATTTCTGAGAATTGGTTTATTTTGCAGAAAAGGGGACAAACAAAGAAATACTTTCATGGGGCCCTGGCTACTAGAACAAATTATTCTAGAAGCCTGGGTCACTTTGCAAACTCCCATTTTGACCATTTGCTTCCAAGCAGAGCTCTGGTGAGCATGGAGATTCTGATTTCTGCTGTGGCAACTGATCTTATCAGCCGGTTCATCTCTTCGGTAACACAAAATTACAGAAACCATATACATAAGGAGGATGATCGTAGGAGGCTGGAACGCATCTTGCTGAGGATGCACTCTGTTGTTGAGGAAGCAGGGGGACGCCATATCACAAATCAAGGAATGATCCTGCAGCTAAAGGGACTTGTTGAGGGATTCTACCTCGGATACTACATGCTCGACAAAATCAAGTTCCAACCCCCCGAATATGAGGTGAGTCATGAGATTCAGTCATTTGCCTTGTCTGCCTGTAACTCTGCCAAGCGCTTTCGTTTTGCTGATGCCATAAGCAAACGCACACCAGTAGCCTTTGGTAGCAGGAGCAGAACAAACCTGAAAGATGTTGTTGATGGTTTAGAAACTAAGATTGCAGATATGAGGGAATTTGTCATTCTCCTTGGTAGCCACCCTCGTCTACCACGCCAGCCTTACAGTACATATCTATACATAGATAACTGTATGTTCGGTCGCCGTATTGAGAAGGAGCAAGTCATCAATTTCTTGCTTTGCAATGATCCTGATGATCCATCTGTTAGCATTCTTCCTATTCTTGGCCCACCAAGGATGGGAAAGAAAACTCTTGTGCAACATGCTTGCCTGGATGAGAGGGTGCGCGACTGCTTCTCCCATATATTTTTCTTTAAAGAAGACGATCTGAAGACCGGAGAGCTCTCGCTTAACTCCAAGGCTTCTGAAGGGAAATATTTGTTTGTTATTGAGTTCATTTGGGATGTGGATGAGGCAGCTTGGACAAAATTCCAATCATATTTGCAGAATATTCCCGGTATTGGAATTAAGGTTGTAGTGATAGGTACAACAGAGGACATTGCTAAGTTTGGGACAACCCAACCCATCAGGGTGAAGAGGCTATCTGAAGAAGAGTTTTGGTACTACTTCAAGGCACTTGCTTTTGGAAGTTTGGATCCTGATGAGCATCCAAAACTAGCATCTCTGGCCATGCAGCTATCTACTGAGATGAATGGATCGTTTCTTGGTGCAATTTTATATGGTGAACTATTAAGAGCTAATCCTAACACTCAATTCTGGAATAGAATCTTATTATTCTTAAGAGAGCTGGCACGGAAGCAATTGACTTCCTCTGGTCTACACCCTGAGGATCTTTTCGAAAGAAATATCCCTGTTGATATGAGCAGGCTAGCTGTTGTGGATGGTCAAGTTCAATGTTGCCTGGTTTATGATCTTAGGGTGGCTGGCCCTGCAGAAGGTGAGCTACCAAAGCTGACGTCACGAGACATGCTACTGGGTGGTGATATTCCTGTTGAAGATAAGTTTGATGTGCTGGTCTGGAGATCTCGCATTCCACCCTACTGTAACTACATAGTTACGTATGAGAAACGAAAACCGCGACGCATGGTTCGTAAGAGGAACACGATCTACCTCTGA
More
|
|||||||
| Protein seq | MAGEEEGGLTEASTVAAFLGVPWDSHRRPPDSVFAPVNRRRAPRALVSMEIMISAVAGDLISRFISSVAQNYRNHIRKEDDRRRLERILLRMHCVVEEAEGRHITNQGMLLQLKGFIEGFYLGYYVLDKIKFQPPEEESIEDEVSHEIQSFALSACNSRKRFRFADAIRKHTPIAFGSRSRTNLKDVVDGLETKIADMREFVILLGSHPRLPRQPYSTYLYIENCMFGSRIEKEQVINFLLCNDPHDPYVSILPIIGPPRIGKKTLVQHACLDERVRNCFSHIFFFKEDDLKTGELSLNSKASQGKYLFVIEFIWDVDEAAWTKFQSYLQNMPGIGIKVVVIGTTEDIAKFGTTQPIRVKRPSEEEFWYYFKALAFGSMDPDEHPKLASLVMQLATEMNGSFLSATIYGELLRANPNTQFWKRILLFVRELARKHLTSSGLHPDDLFERNIPVDMSRIAVVDGQVQGCLLYDVRVAGPADGELPKLTSRDMLLGCDIPVEDKFDVLNSDNKEDLEKMMSVLKIHHHHKLRNVFPVQGAYGREKGRSSAVMHYRRKIAKTKCGYKAHYMLRRLPNRCCVEISENWFILQKRGQTKKYFHGALATRTNYSRSLGHFANSHFDHLLPSRALVSMEILISAVATDLISRFISSVTQNYRNHIHKEDDRRRLERILLRMHSVVEEAGGRHITNQGMILQLKGLVEGFYLGYYMLDKIKFQPPEYEVSHEIQSFALSACNSAKRFRFADAISKRTPVAFGSRSRTNLKDVVDGLETKIADMREFVILLGSHPRLPRQPYSTYLYIDNCMFGRRIEKEQVINFLLCNDPDDPSVSILPILGPPRMGKKTLVQHACLDERVRDCFSHIFFFKEDDLKTGELSLNSKASEGKYLFVIEFIWDVDEAAWTKFQSYLQNIPGIGIKVVVIGTTEDIAKFGTTQPIRVKRLSEEEFWYYFKALAFGSLDPDEHPKLASLAMQLSTEMNGSFLGAILYGELLRANPNTQFWNRILLFLRELARKQLTSSGLHPEDLFERNIPVDMSRLAVVDGQVQCCLVYDLRVAGPAEGELPKLTSRDMLLGGDIPVEDKFDVLVWRSRIPPYCNYIVTYEKRKPRRMVRKRNTIYL
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.484537 | 1.9957225 | 5.355819 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0161133 | RBH | 0.271877 | 0.557539 | 0.407915 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g06220 | RBH | 0.844879 | 1.186281 | 0.326336 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0160900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0004230 | RBH | 0.678331 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0004310 | RBH | 0.0 | 0.0 | 0.899215 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0004220 | SBH | 1.473024 | 0.0 | 2.514467 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0004150 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0004130 | RBH | 0.0 | 0.0 | 2.690060 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0052300 | RBH | 0.1005865 | 2.026358 | 3.168913 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0004220 | RBH | 0.000000 | 0.0 | 0.281950 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0052100 | RBH | 1.0967935 | 1.5816555 | 6.1694665 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0004140 | RBH | 0.039922 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0004220 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0004220 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0004140 | RBH | 0.402321 | 0.0 | 0.228016 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0004240 | SBH | 0.0 | 1.522199 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G004200 | RBH | 0.0 | 1.073598 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0004200 | RBH | 0.0 | 9.303191 | 0.0 |
