Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsZS97_02G0473500		OGI:02077530 \| 16/16			Zhenshan 97 \| ZS97RS3 \| HZAU			Chr02:28773891-28778433		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		RDD1, OsDof2, OsDof9, Dof9, OsDof-9, DLN64, OsDLN64
DNA seq		GTGCAATTGTGCAAAGGCAGGGTGCAAGCATGATGATGGTGATGAAGAGTTAGAGGAGTACCTATATATAGCTTTTTGGCCTAGAAAAATAAATATATCATGGTTTGTAATAGGATAGTACAAATGACCATGCCGTGCACTAAAACAGATGGCCTAACATATGATAATAGTACCATGTGGATGGAAGGTGAGAGAGAGAAAGAGAGAAAGTTAAAGTAGGGGCGTCTGTCATACATACTCGCGCCATGCCGGCCCTTCTTCCCTCCTCTCCTCCTAGCTCCCACTAGTGGCTTTCATGGCTGGAAGATTCTTGCCTCTGGGATGATGATGATGATGAGAGACGATTCGACATCTCAGAGAGTAGCTAAGCCTACCTGCCACAAGAAAATAGTATAGCACAGAGTGCGAGCGAGCGATCGAGATGACAGATCGGTATATATACAAATCAGCATTTGCATGCAGGAGAACATAATAAAAGGATGGCAAATATAATCAATATATTAATGTAGGAGTAGTTGTAAACGACAGTAAATTAATAGGAGTATTATTACAAGCTGTTCCTCAAAGTTACTATCATGGTGTATAAATGAACTTACTGAAGCCACCATAAAAAATGACTGTTGCTAGGTGCCCCTCTAACAGAGAGCATTGTATGCTAAAGCACCAGGCCCCTCAGTGATCTATGTGAGCTTGGTTTAGGAAGCATATATTGAACTATGCACCGAGTTAACTGGAGGTATATCAATGTGGTTTCTGACGACACAAGTGGCCATTAATTCTGTATCTCTAATTCCCCATCGATTGAAATTTCTAACATGTCACCTGTGCCTGCATCTGCAAGATGCATGCCATGCAAAACCAACACAAGAATTTGGCCAATCAATCGGACATATGCAACTAACCAACATGTTGTTTGTTCAGACTACATACAGTAACTCAAACGGCGTACGTACCGTCCGTGGTGGAACACACACACAGCCATCAAAACTAAAAAAATGATAAGAGTATCATGCTTCAGTGCAGATTCTACATGACATGATTAAATCACAAAATGAGAGATTGATTGGTGAATAGATCAGCAGCTGTATAATATCACCAAGTTCACCACCCTTAAAAATCTGTGTATCCTGCTGTGTTAGCCAGCCCCCAAGCCGATAATTAACCACACACACATGAACAAACAACAAAGAAGCAACACCATGAAACCGAAAAACCAAACAAAGCAAAGAGAAACAAAACGCCATATGTAACACTAATCACCACAAGCTTATTAACCCTCCTTGCCTCTATCTCGTTTCTCTATCTCCACATGCTGCTAGCTGCTGACCACCACGCATGCATGCATGAGCCATGCATGGCGGCGGCGGGCAAGCAGTAGCAGCTCGCACCACCTTACCAAGAACCGCCGCCGCCGCCGCCATTGCTGCTGCCGTTGCCGATCATGCTGCTATTCCAGAACCCTGGGGCCTCATGGCCACCGATGACGCCGCCGCCACCACCTTGGTTCTTGCCGTGGTCGTACTGATGATCGCCGCCGCTGTTCGCGTCACCAGCCGCGGCGCTCACCACCGGCTTCAGGTCCTCGAAGGGGAACAGCAACCTGCCCGCCGCGCTCTCTTGCAACCCAGCGCTGCACGCGCCGAACACCCCGGAGCCGCCGCCTGCACCCGCGCCGTGCGTGTCCAGGGAGAAACCGAGCACGGTCTGAGCTTGTTGTTGCTGCTGCTGCTGTGGCGGCGGTGGCATGCGGAACTCGCCGAGATGGAACCCCGCGGCTGCGTACTCCGCCGGCATCCCTAGCGGCGCCATCTGCGGCAGCGGAACGTAGCAGCCGGTGCTCCTCAGCAACTCCATCGCCGAGAACGCGCCCACGCTGCCCCTGCCACCGGCGCCGTTCGCCGCCGCCAGGTTGCCTCCGGGGTTGCACACGCTGCTGCTCTCCAAGCTCGGGAACGCCGTGAACTCCGAAGGCTGCAGGGCGCGGCCGTGGTGGTGCGGGAACGCCAGGTTGAGGTCCTGCGCGCCCTCGTGCATCAGCTTCGGGTTCTTGGCCGCCAGCCCCACGGGGACCGAGCCGGACACCGCCGCGGAGGTGGAGGCCGACGCGGCCGCCGACGGCACCACCGAGGACGACGAGCGCTTGTTCTTCCGTGAGCCGCCGCCGACGGGGACGTTGCGGAGCGAGCCGCCCTCCGTCCAGTAGCGGCGGCACGTCTTGCAGAAGTAGCGCGGCTGCTGGAGGCTGTAGTTGTTGTAGTAGCAGAACTTGGTGTTCGTCGAGTTGCACCGCGGGCAGTTGAGCGCCTTCTCCTTCTGCGGCCGCGCGCGGCGCTCCGTGCCAGCCCCAGCTCCGGCGGCGCCCGCGCCGGCGGCCGCTCCAGCCGCCGGTGGGGCGATAGGCCGCTGGGCGCTGGCCGCCGAGGACGGCGGTGGCGGTGGCTGATTTGAGCTCCCATTAGGATTTGGATTTGCACCCATCAGCATCTCTTCCATGGGCTTCACTAGCCCTAGCCCCTGGTGATTGACACATGTCGTTGCACTCCATTAGATGTTGCAATTGCAAGTATCAACACAAACCTAGAACTAAGTTATGCAATACTAGACAATTAGCAAGAACCAAGAAGCAAGAACATGTAGTATATGAGAGACGAATGGGGGAAGATGAATGAGCATGAGGTGTGATGTGAGCTAGGATCCTTATGGTGCAACAAAGAACCAAGCAAATGGATACAAAGCGAGATTAAAGCTAGAAGAGGGAAAGGTGAAAGATAGAAATAAAGCGGGAAAAAAAAAGCAAAGTAAAGATGAGAGAGAAAACACACCACCACACAAAACACACAACTTTGTTTGTGCTCTTGTAGGGTTGTGTTTGTGGCGTAGCAGTACTGCTGCTGCTGCTACTACATCATCCTCCAAGACATGGCTACTCTTTTGATGCAAGGTGTGGGCTTGAGGAGAGAGACGAAAGGGTGAGGGGTGGAGAGAAAAGCCATGAGGAAAAGAGAGATGAAAAGATAAAAAGGAAAGGGAGGATAAGAAAGAAAGCGAGGAACAAAGGAAAAGAAAAGCGGTGCGTCGTGTGCTCCTTTCAAGGATTAAAAGGGGAAGGAGAGGAGGGAGCAAGAGAATTAAAAGGCCCCAAACAACAACAACAAGAGCCCTCAGCTCGAAGCCAATGGAGAAGACAGAAACTAACCCACATACACACAGAGCGAGAAGAATATGGCCGATCCGTGCATAGATCTGCACAAAGAATAAAAGGTTGGCCATGGCGGTTCCCAAGAGCAAACAAAGCCGAGAGAGAATAGAGATCACCGTATCCCACCAGAGGAAAAGCAAGCGCCAAGATCAAGGCACAGGCAGATTAAACAAGAAGGATCGACCAAGAAACACCCACATCAACAAGATCCAGAAGAAGAGCAGAAGCCAAAATCGACCCGGCCGGGCCCCCGGTGAGAGATCTTAATTGTAGACATGTCGCCGGTGTTGCATGCACCGATTCGAGAAAGGATCGAGCGCAGATCAGCCGCCGCAGCTTAATTACCTGATGCCAGTGGGCCGCATCCATGCAAGAAGAATCCCAATTGCTCGATCCTCGCCAACGATTTCTCGCTATCAACACAAGGAGAAGAGAGAGAGGCAAGGAGGATGAGGAGCTCCTGGATGTCTCGAGTAGCTAGCTGCAGGCACGAGTCAAGGAGAGGAGGAATGTCTTGTGGATGGCCTCAATTGAATTGCTCTCCCTTTCTATCTCTCTCTCTTCTCATATGTCATGAGATAGTGGGATTCTTTTCCCAATATTTTTATGTCTCTTGGAGAGGAGAGGAGAGAGGACGGATGTGTGGGAGGAGGAACAGCAAGGGAAATTGGTGCAGCAGCGTGCTGTGCTTGCCTCCGTTTTTGGTTGTAAATTTTTTGTTCTGGCTGGCTGGTTGAGTGTGCCGCCACCTGCGTGCGTGGGCCGTTCGCAAAACCAGTCGGTGGGAGTAGTCAACCTAGCGAAGGAAGCCGCAGGCCCGCAGCCGCGCAGGCAGGGGGAGAGAGGCGCGCAGCCCTACGAATGATGGTCCGTGGGGCCGTGCACGTGCGTAGGACGACGCGCCACGTGCGAGCCAAACCAACCAGGGTGTTTTTAGCGCTTAGCAGTATGAAGCTGCGTATAGATACTTGAGGAGGGGTACAGATCAGCTCTCAACAGCAACGGGCAGGATCAAATTCATTGCGCTTTTAAATATGACTTGGCTCATCAGTTCTACCTGCTTTTAGGTGAAGTGATTACATGATGTTCGGAACTATGTCAAGGAAATTTTTAAGAGGGACCAGCTGACTTTCCTAGGTAATTTTACACGAAGCTGTAGAATTAGAGTTGATATACAACTCTGAGCTTTTGTTTCCATATAGTATGTGTTTGTGTTTTGTATACAATCGATTTATAAAAAACAGAATTAGATTTGATGTAGAACTATTGGAATCTATTTTCACAAATGAGATACAACGTATTTCATATATGAATGACTGTAGAGATCATTAGACATGAATATAT More
CDS seq		ATGGATGCGGCCCACTGGCATCAGGGGCTAGGGCTAGTGAAGCCCATGGAAGAGATGCTGATGGGTGCAAATCCAAATCCTAATGGGAGCTCAAATCAGCCACCGCCACCGCCGTCCTCGGCGGCCAGCGCCCAGCGGCCTATCGCCCCACCGGCGGCTGGAGCGGCCGCCGGCGCGGGCGCCGCCGGAGCTGGGGCTGGCACGGAGCGCCGCGCGCGGCCGCAGAAGGAGAAGGCGCTCAACTGCCCGCGGTGCAACTCGACGAACACCAAGTTCTGCTACTACAACAACTACAGCCTCCAGCAGCCGCGCTACTTCTGCAAGACGTGCCGCCGCTACTGGACGGAGGGCGGCTCGCTCCGCAACGTCCCCGTCGGCGGCGGCTCACGGAAGAACAAGCGCTCGTCGTCCTCGGTGGTGCCGTCGGCGGCCGCGTCGGCCTCCACCTCCGCGGCGGTGTCCGGCTCGGTCCCCGTGGGGCTGGCGGCCAAGAACCCGAAGCTGATGCACGAGGGCGCGCAGGACCTCAACCTGGCGTTCCCGCACCACCACGGCCGCGCCCTGCAGCCTTCGGAGTTCACGGCGTTCCCGAGCTTGGAGAGCAGCAGCGTGTGCAACCCCGGAGGCAACCTGGCGGCGGCGAACGGCGCCGGTGGCAGGGGCAGCGTGGGCGCGTTCTCGGCGATGGAGTTGCTGAGGAGCACCGGCTGCTACGTTCCGCTGCCGCAGATGGCGCCGCTAGGGATGCCGGCGGAGTACGCAGCCGCGGGGTTCCATCTCGGCGAGTTCCGCATGCCACCGCCGCCACAGCAGCAGCAGCAACAACAAGCTCAGACCGTGCTCGGTTTCTCCCTGGACACGCACGGCGCGGGTGCAGGCGGCGGCTCCGGGGTGTTCGGCGCGTGCAGCGCTGGGTTGCAAGAGAGCGCGGCGGGCAGGTTGCTGTTCCCCTTCGAGGACCTGAAGCCGGTGGTGAGCGCCGCGGCTGGTGACGCGAACAGCGGCGGCGATCATCAGTACGACCACGGCAAGAACCAAGGTGGTGGCGGCGGCGTCATCGGTGGCCATGAGGCCCCAGGGTTCTGGAATAGCAGCATGATCGGCAACGGCAGCAGCAATGGCGGCGGCGGCGGCGGTTCTTGGTAA More
Protein seq		MDAAHWHQGLGLVKPMEEMLMGANPNPNGSSNQPPPPPSSAASAQRPIAPPAAGAAAGAGAAGAGAGTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSSVVPSAAASASTSAAVSGSVPVGLAAKNPKLMHEGAQDLNLAFPHHHGRALQPSEFTAFPSLESSSVCNPGGNLAAANGAGGRGSVGAFSAMELLRSTGCYVPLPQMAPLGMPAEYAAAGFHLGEFRMPPPPQQQQQQQAQTVLGFSLDTHGAGAGGGSGVFGACSAGLQESAAGRLLFPFEDLKPVVSAAAGDANSGGDHQYDHGKNQGGGGGVIGGHEAPGFWNSSMIGNGSSNGGGGGGSW
Function		Dof zinc finger protein 2 [UniProtKB/Swiss-Prot:B9F1L8]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0473500	OsZS97_02T0473500.1	Chr02	28773891	28777875	-	makerRMon
CDS seq	ATGTGGGGGCTAGGGCTAGTGAAGCCCATGGAAGAGATGCTGATGGGTGCAAATCCAAATCCTAATGGGAGCTCAAATCAGCCACCGCCACCGCCGTCCTCGGCGGCCAGCGCCCAGCGGCCTATCGCCCCACCGGCGGCTGGAGCGGCCGCCGGCGCGGGCGCCGCCGGAGCTGGGGCTGGCACGGAGCGCCGCGCGCGGCCGCAGAAGGAGAAGGCGCTCAACTGCCCGCGGTGCAACTCGACGAACACCAAGTTCTGCTACTACAACAACTACAGCCTCCAGCAGCCGCGCTACTTCTGCAAGACGTGCCGCCGCTACTGGACGGAGGGCGGCTCGCTCCGCAACGTCCCCGTCGGCGGCGGCTCACGGAAGAACAAGCGCTCGTCGTCCTCGGTGGTGCCGTCGGCGGCCGCGTCGGCCTCCACCTCCGCGGCGGTGTCCGGCTCGGTCCCCGTGGGGCTGGCGGCCAAGAACCCGAAGCTGATGCACGAGGGCGCGCAGGACCTCAACCTGGCGTTCCCGCACCACCACGGCCGCGCCCTGCAGCCTTCGGAGTTCACGGCGTTCCCGAGCTTGGAGAGCAGCAGCGTGTGCAACCCCGGAGGCAACCTGGCGGCGGCGAACGGCGCCGGTGGCAGGGGCAGCGTGGGCGCGTTCTCGGCGATGGAGTTGCTGAGGAGCACCGGCTGCTACGTTCCGCTGCCGCAGATGGCGCCGCTAGGGATGCCGGCGGAGTACGCAGCCGCGGGGTTCCATCTCGGCGAGTTCCGCATGCCACCGCCGCCACAGCAGCAGCAGCAACAACAAGCTCAGACCGTGCTCGGTTTCTCCCTGGACACGCACGGCGCGGGTGCAGGCGGCGGCTCCGGGGTGTTCGGCGCGTGCAGCGCTGGGTTGCAAGAGAGCGCGGCGGGCAGGTTGCTGTTCCCCTTCGAGGACCTGAAGCCGGTGGTGAGCGCCGCGGCTGGTGACGCGAACAGCGGCGGCGATCATCAGTACGACCACGGCAAGAACCAAGGTGGTGGCGGCGGCGTCATCGGTGGCCATGAGGCCCCAGGGTTCTGGAATAGCAGCATGATCGGCAACGGCAGCAGCAATGGCGGCGGCGGCGGCGGTTCTTGGTAA More
Protein seq	MWGLGLVKPMEEMLMGANPNPNGSSNQPPPPPSSAASAQRPIAPPAAGAAAGAGAAGAGAGTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSSVVPSAAASASTSAAVSGSVPVGLAAKNPKLMHEGAQDLNLAFPHHHGRALQPSEFTAFPSLESSSVCNPGGNLAAANGAGGRGSVGAFSAMELLRSTGCYVPLPQMAPLGMPAEYAAAGFHLGEFRMPPPPQQQQQQQAQTVLGFSLDTHGAGAGGGSGVFGACSAGLQESAAGRLLFPFEDLKPVVSAAAGDANSGGDHQYDHGKNQGGGGGVIGGHEAPGFWNSSMIGNGSSNGGGGGGSW More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0473500	OsZS97_02T0473500.2	Chr02	28773891	28777875	-	makerRMon
CDS seq	ATGGATGCGGCCCACTGGCATCAGGGGCTAGGGCTAGTGAAGCCCATGGAAGAGATGCTGATGGGTGCAAATCCAAATCCTAATGGGAGCTCAAATCAGCCACCGCCACCGCCGTCCTCGGCGGCCAGCGCCCAGCGGCCTATCGCCCCACCGGCGGCTGGAGCGGCCGCCGGCGCGGGCGCCGCCGGAGCTGGGGCTGGCACGGAGCGCCGCGCGCGGCCGCAGAAGGAGAAGGCGCTCAACTGCCCGCGGTGCAACTCGACGAACACCAAGTTCTGCTACTACAACAACTACAGCCTCCAGCAGCCGCGCTACTTCTGCAAGACGTGCCGCCGCTACTGGACGGAGGGCGGCTCGCTCCGCAACGTCCCCGTCGGCGGCGGCTCACGGAAGAACAAGCGCTCGTCGTCCTCGGTGGTGCCGTCGGCGGCCGCGTCGGCCTCCACCTCCGCGGCGGTGTCCGGCTCGGTCCCCGTGGGGCTGGCGGCCAAGAACCCGAAGCTGATGCACGAGGGCGCGCAGGACCTCAACCTGGCGTTCCCGCACCACCACGGCCGCGCCCTGCAGCCTTCGGAGTTCACGGCGTTCCCGAGCTTGGAGAGCAGCAGCGTGTGCAACCCCGGAGGCAACCTGGCGGCGGCGAACGGCGCCGGTGGCAGGGGCAGCGTGGGCGCGTTCTCGGCGATGGAGTTGCTGAGGAGCACCGGCTGCTACGTTCCGCTGCCGCAGATGGCGCCGCTAGGGATGCCGGCGGAGTACGCAGCCGCGGGGTTCCATCTCGGCGAGTTCCGCATGCCACCGCCGCCACAGCAGCAGCAGCAACAACAAGCTCAGACCGTGCTCGGTTTCTCCCTGGACACGCACGGCGCGGGTGCAGGCGGCGGCTCCGGGGTGTTCGGCGCGTGCAGCGCTGGGTTGCAAGAGAGCGCGGCGGGCAGGTTGCTGTTCCCCTTCGAGGACCTGAAGCCGGTGGTGAGCGCCGCGGCTGGTGACGCGAACAGCGGCGGCGATCATCAGTACGACCACGGCAAGAACCAAGGTGGTGGCGGCGGCGTCATCGGTGGCCATGAGGCCCCAGGGTTCTGGAATAGCAGCATGATCGGCAACGGCAGCAGCAATGGCGGCGGCGGCGGCGGTTCTTGGTAA More
Protein seq	MDAAHWHQGLGLVKPMEEMLMGANPNPNGSSNQPPPPPSSAASAQRPIAPPAAGAAAGAGAAGAGAGTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSSVVPSAAASASTSAAVSGSVPVGLAAKNPKLMHEGAQDLNLAFPHHHGRALQPSEFTAFPSLESSSVCNPGGNLAAANGAGGRGSVGAFSAMELLRSTGCYVPLPQMAPLGMPAEYAAAGFHLGEFRMPPPPQQQQQQQAQTVLGFSLDTHGAGAGGGSGVFGACSAGLQESAAGRLLFPFEDLKPVVSAAAGDANSGGDHQYDHGKNQGGGGGVIGGHEAPGFWNSSMIGNGSSNGGGGGGSW More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_02G0473500	OsZS97_02T0473500.3	Chr02	28773891	28778433	-	makerRMon
CDS seq	ATGGAAGAGATGCTGATGGGTGCAAATCCAAATCCTAATGGGAGCTCAAATCAGCCACCGCCACCGCCGTCCTCGGCGGCCAGCGCCCAGCGGCCTATCGCCCCACCGGCGGCTGGAGCGGCCGCCGGCGCGGGCGCCGCCGGAGCTGGGGCTGGCACGGAGCGCCGCGCGCGGCCGCAGAAGGAGAAGGCGCTCAACTGCCCGCGGTGCAACTCGACGAACACCAAGTTCTGCTACTACAACAACTACAGCCTCCAGCAGCCGCGCTACTTCTGCAAGACGTGCCGCCGCTACTGGACGGAGGGCGGCTCGCTCCGCAACGTCCCCGTCGGCGGCGGCTCACGGAAGAACAAGCGCTCGTCGTCCTCGGTGGTGCCGTCGGCGGCCGCGTCGGCCTCCACCTCCGCGGCGGTGTCCGGCTCGGTCCCCGTGGGGCTGGCGGCCAAGAACCCGAAGCTGATGCACGAGGGCGCGCAGGACCTCAACCTGGCGTTCCCGCACCACCACGGCCGCGCCCTGCAGCCTTCGGAGTTCACGGCGTTCCCGAGCTTGGAGAGCAGCAGCGTGTGCAACCCCGGAGGCAACCTGGCGGCGGCGAACGGCGCCGGTGGCAGGGGCAGCGTGGGCGCGTTCTCGGCGATGGAGTTGCTGAGGAGCACCGGCTGCTACGTTCCGCTGCCGCAGATGGCGCCGCTAGGGATGCCGGCGGAGTACGCAGCCGCGGGGTTCCATCTCGGCGAGTTCCGCATGCCACCGCCGCCACAGCAGCAGCAGCAACAACAAGCTCAGACCGTGCTCGGTTTCTCCCTGGACACGCACGGCGCGGGTGCAGGCGGCGGCTCCGGGGTGTTCGGCGCGTGCAGCGCTGGGTTGCAAGAGAGCGCGGCGGGCAGGTTGCTGTTCCCCTTCGAGGACCTGAAGCCGGTGGTGAGCGCCGCGGCTGGTGACGCGAACAGCGGCGGCGATCATCAGTACGACCACGGCAAGAACCAAGGTGGTGGCGGCGGCGTCATCGGTGGCCATGAGGCCCCAGGGTTCTGGAATAGCAGCATGATCGGCAACGGCAGCAGCAATGGCGGCGGCGGCGGCGGTTCTTGGTAA More
Protein seq	MEEMLMGANPNPNGSSNQPPPPPSSAASAQRPIAPPAAGAAAGAGAAGAGAGTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSSVVPSAAASASTSAAVSGSVPVGLAAKNPKLMHEGAQDLNLAFPHHHGRALQPSEFTAFPSLESSSVCNPGGNLAAANGAGGRGSVGAFSAMELLRSTGCYVPLPQMAPLGMPAEYAAAGFHLGEFRMPPPPQQQQQQQAQTVLGFSLDTHGAGAGGGSGVFGACSAGLQESAAGRLLFPFEDLKPVVSAAAGDANSGGDHQYDHGKNQGGGGGVIGGHEAPGFWNSSMIGNGSSNGGGGGGSW More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	3.048302	43.033453	13.080287

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_02g0673700	RBH	0.202685	0.554396	1.369402
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os02g45200	RBH	0.150435	0.230157	0.279921
Nipponbare \| IRGSP 1.0 \| RAP-db	Os02g0673700	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_02g0028700	RBH	0.072627	5.606575	0.375493
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_02g0028780	RBH	0.000000	1.083767	1.940428
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_02g0028640	RBH	0.228883	3.180778	2.815284
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_02g0028250	RBH	0.0	0.138736	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_02g0028370	RBH	0.0	5.562286	2.513437
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_02G0444900	RBH	2.239528	34.2536585	5.70636
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_02g0028180	RBH	0.052675	0.536796	0.199880
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_04G0451900	RBH	4.0407945	28.80385	17.3992405
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_02g0028510	RBH	0.051512	0.296076	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_02g0028220	RBH	0.000000	12.390618	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_02g0028520	RBH	0.0	27.119858	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_02g0028390	RBH	0.124713	0.970425	1.046731
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_02g0028080	RBH	0.0	1.282870	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_02G028650	RBH	0.0	0.724289	0.858362
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_02g0028430	RBH	1.465440	66.571632	0.733456

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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