Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsN22_02G028650 OGI:02077530 | 16/16 N22 | OsN22RS2 | Gramene(+IsoSeq) Chr02:28818377-28821249
Gene Symbol RDD1, OsDof2, OsDof9, Dof9, OsDof-9, DLN64, OsDLN64
DNA seq

AAAAAAATGATAAGAGTATCATGCTTCAGTGCAGATTCTACATGACATGATTAAATCACAAAATGAGAGATTGATTGGTGAATAGATCAGCAGCTGTATAATATCACCAAGTTCACCACCCTTAAAAATCTGTGTATCCTGCTGTGTTAGCCAGCCCCCAAGCCGATAATTAACCACACACACATGAACAAACAACAAAGAAGCAACACCATGAAACCGAAAAACCAAACAAAGCAAAGAGAAACAAAACGCCATATGTAACACTAATCACCACAAGCTTATTAACCCTCCTTGTCTCTATCTCGTTTCTCTATCTCCACATGCTGCTAGCTGCTGACCACCACGCATGCATGCATGAGCCATGCATGGCGGCGGCGGGCAAGCAGTAGCAGCTCGCACCACCTTACCAAGAACCGCCGCCGCCGCCGCCATTGCTGCTGCCGTTGCCGATCATGCTGCTATTCCAGAACCCTGGGGCCTCATGGCCACCGATGACGCCGCCGCCACCACCTTGGTTCTTGCCGTGGTCGTACTGATGATCGCCGCCGCTGTTCGCGTCGCCAGCCGCGGCGCTCACCACCGGCTTCAGGTCCTCGAAGGGGAACAGCAACCTGCCCGCCGCGCTCTCTTGCAACCCAGCGCTGCACGCGCCGAACACCCCGGAGCCGCCGCCTGCACCCGCGCCGTGCGTGTCCAGGGAGAAACCGAGCACGGTCTGAGCTTGTTGTTGCTGCTGCTGCTGTGGCGGCGGTGGCATGCGGAACTCGCCGAGATGGAACCCCGCGGCTGCGTACTCCGCCGGCATCCCTAGCGGCGCCATCTGCGGCAGCGGAACGTAGCAGCCGGTGCTCCTCAGCAACTCCATCGCCGAGAACGCGCCCACGCTGCCCCTGCCACCGGCGCCGTTCGCCGCCGCCAGGTTGCCTCCGGGGTTGCACACGCTGCTGCTCTCCAAGCTCGGGAACGCCGTGAACTCCGAAGGCTGCAGGGCGCGGCCGTGGTGGTGCGGGAACGCCAGGTTGAGGTCCTGCGCGCCCTCGTGCATCAGCTTCGGGTTCTTGGCCGCCAGCCCCACGGGGACCGAGCCGGACACCGCCGCGGAGGTGGAGGCCGACGCGGCCGCTGACGGCACCACCGAGGACGACGAGCGCTTGTTCTTCCGTGAGCCGCCGCCGACGGGGACGTTGCGGAGCGAGCCGCCCTCCGTCCAGTAGCGGCGGCACGTCTTGCAGAAGTAGCGCGGCTGCTGGAGGCTGTAGTTGTTGTAGTAGCAGAACTTGGTGTTCGTCGAGTTGCACCGCGGGCAGTTGAGCGCCTTCTCCTTCTGCGGCCGCGCGCGGCGCTCCGTGCCAGCCCCAGCTCCGGCGGCGCCCGCGCCGGCGGCCGCTCCAGCCGCCGGTGGGGCGATAGGCCGCTGGGCGCTGGCCGCCGAGGACGGCGGTGGCGGTGGCTGATTTGAGCTCCCATTAGGATTTGGATTTGCACCCATCAGCATCTCTTCCATGGGCTTCACTAGCCCTAGCCCCTGGTGATTGACACATGTCGTTGCACTCCATTAGATGTTGCAATTGCAAGTATCAACACAAACCTAGAACTAAGTTATGCAATACTAGACAATTAGCAAGAACCAAGAAGCAAGAACATGTAGTATATGAGAGACGAATGGGGGAAGATGAATGAGCATGAGGTGTGATGTGAGCTAGGATCCTTATGGTGCAACAAAGAACCAAGCAAATGGATACAAAGCGAGATTAAAGCTAGAAGAGGGAAAGGTGAAAGATAGAAATAAAGCGGGAAAAAAAAAAGCAAAGTAAAGATGAGAGAGAAAACACACCACCACACAAAACACACAACTTTGTTTGTGCTCTTGTAGGGTTGTGTTTGTGGCGTAGCAGTACTGCTGCTGCTGCTACTACATCATCCTCCAAGACATGGCTACTCTTTTGATGCAAGATGTGGGCTTGAGGAGAGAGACGAAAGGGTGAGGGGTGGAGAGAAAAGCCATGAGGAAAAGAGAGATGAAAAGATAAAAAGGAAAGGGAGGATAAGAAAGAAAGCGAGGAACAAAGGAAAAGAAAAGCGGTGCGTCGTGTGCTCCTTTCAAGGATTAAAAGGGGAAGGAGAGGAGGGAGCAAGAGAATTAAAAGGCCCCAAACAACAACAACAAGAGCCCTCAGCTCGAAGCCAATGGAGAAGACAGAAACTAACCCACATACACACAGAGCGAGAAGAATATGGCCGATCCGTGCATAGATCTGCACAAAGAATAAAAGGTTGGCCATGGCGGTTCCCAAGAGCAAACAAAGCCGAGAGAGAATAGAGATCACCGTATCCCACCAGAGGAAAAGCAAGCGCCAAGATCAAGGCACAGGCAGATTAAACAAGAAGGATCGACCAAGAAACACCCACATCAACAAGATCCAGAAGAAGAGCAGAAGCCAAAATCGACCCGGCCGGGCCCCCGGTGAGAGATCTTAATTGTAGACATGTCGCCGGTGTTGCATGCACCGATTCGAGAAAGGATCGAGCGCAGATCAGCCGCCGCAGCTTAATTACCTGATGCCAGTGGGCCGCATCCATGCAAGAAGAATCCCAATTGCTCGATCCTCGCCAACGATTTCTCGCTATCAACACAAGGAGAAGAGAGAGAGGCAAGGAGGATGAGGAGCTCCTGGATGTCTCGAGTAGCTAGCTGCAGGCACGAGTCAAGGAGAGGAGGAATGTCTTGTGGATGGCCTCAATTGAATTGCTCTCCCTTTCTATCTCTCTCTATCTTCTCATATGTCATGAGATAGTGGGATTCTTTTCCCAATATTTTTATGTCTCTTGGAGAGGAGAGGAGAGAGGACGGATGTGTGGGAGGAGGAACAGCA

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CDS seq

ATGGATGCGGCCCACTGGCATCAGGGGCTAGGGCTAGTGAAGCCCATGGAAGAGATGCTGATGGGTGCAAATCCAAATCCTAATGGGAGCTCAAATCAGCCACCGCCACCGCCGTCCTCGGCGGCCAGCGCCCAGCGGCCTATCGCCCCACCGGCGGCTGGAGCGGCCGCCGGCGCGGGCGCCGCCGGAGCTGGGGCTGGCACGGAGCGCCGCGCGCGGCCGCAGAAGGAGAAGGCGCTCAACTGCCCGCGGTGCAACTCGACGAACACCAAGTTCTGCTACTACAACAACTACAGCCTCCAGCAGCCGCGCTACTTCTGCAAGACGTGCCGCCGCTACTGGACGGAGGGCGGCTCGCTCCGCAACGTCCCCGTCGGCGGCGGCTCACGGAAGAACAAGCGCTCGTCGTCCTCGGTGGTGCCGTCAGCGGCCGCGTCGGCCTCCACCTCCGCGGCGGTGTCCGGCTCGGTCCCCGTGGGGCTGGCGGCCAAGAACCCGAAGCTGATGCACGAGGGCGCGCAGGACCTCAACCTGGCGTTCCCGCACCACCACGGCCGCGCCCTGCAGCCTTCGGAGTTCACGGCGTTCCCGAGCTTGGAGAGCAGCAGCGTGTGCAACCCCGGAGGCAACCTGGCGGCGGCGAACGGCGCCGGTGGCAGGGGCAGCGTGGGCGCGTTCTCGGCGATGGAGTTGCTGAGGAGCACCGGCTGCTACGTTCCGCTGCCGCAGATGGCGCCGCTAGGGATGCCGGCGGAGTACGCAGCCGCGGGGTTCCATCTCGGCGAGTTCCGCATGCCACCGCCGCCACAGCAGCAGCAGCAACAACAAGCTCAGACCGTGCTCGGTTTCTCCCTGGACACGCACGGCGCGGGTGCAGGCGGCGGCTCCGGGGTGTTCGGCGCGTGCAGCGCTGGGTTGCAAGAGAGCGCGGCGGGCAGGTTGCTGTTCCCCTTCGAGGACCTGAAGCCGGTGGTGAGCGCCGCGGCTGGCGACGCGAACAGCGGCGGCGATCATCAGTACGACCACGGCAAGAACCAAGGTGGTGGCGGCGGCGTCATCGGTGGCCATGAGGCCCCAGGGTTCTGGAATAGCAGCATGATCGGCAACGGCAGCAGCAATGGCGGCGGCGGCGGCGGTTCTTGG

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Protein seq

MDAAHWHQGLGLVKPMEEMLMGANPNPNGSSNQPPPPPSSAASAQRPIAPPAAGAAAGAGAAGAGAGTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSSVVPSAAASASTSAAVSGSVPVGLAAKNPKLMHEGAQDLNLAFPHHHGRALQPSEFTAFPSLESSSVCNPGGNLAAANGAGGRGSVGAFSAMELLRSTGCYVPLPQMAPLGMPAEYAAAGFHLGEFRMPPPPQQQQQQQAQTVLGFSLDTHGAGAGGGSGVFGACSAGLQESAAGRLLFPFEDLKPVVSAAAGDANSGGDHQYDHGKNQGGGGGVIGGHEAPGFWNSSMIGNGSSNGGGGGGSW

Function Dof zinc finger protein 2 [UniProtKB/Swiss-Prot:B9F1L8]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsN22_02G028650 OsN22_02G028650_01 Chr02 28818377 28821249 - NAM
CDS seq

ATGGATGCGGCCCACTGGCATCAGGGGCTAGGGCTAGTGAAGCCCATGGAAGAGATGCTGATGGGTGCAAATCCAAATCCTAATGGGAGCTCAAATCAGCCACCGCCACCGCCGTCCTCGGCGGCCAGCGCCCAGCGGCCTATCGCCCCACCGGCGGCTGGAGCGGCCGCCGGCGCGGGCGCCGCCGGAGCTGGGGCTGGCACGGAGCGCCGCGCGCGGCCGCAGAAGGAGAAGGCGCTCAACTGCCCGCGGTGCAACTCGACGAACACCAAGTTCTGCTACTACAACAACTACAGCCTCCAGCAGCCGCGCTACTTCTGCAAGACGTGCCGCCGCTACTGGACGGAGGGCGGCTCGCTCCGCAACGTCCCCGTCGGCGGCGGCTCACGGAAGAACAAGCGCTCGTCGTCCTCGGTGGTGCCGTCAGCGGCCGCGTCGGCCTCCACCTCCGCGGCGGTGTCCGGCTCGGTCCCCGTGGGGCTGGCGGCCAAGAACCCGAAGCTGATGCACGAGGGCGCGCAGGACCTCAACCTGGCGTTCCCGCACCACCACGGCCGCGCCCTGCAGCCTTCGGAGTTCACGGCGTTCCCGAGCTTGGAGAGCAGCAGCGTGTGCAACCCCGGAGGCAACCTGGCGGCGGCGAACGGCGCCGGTGGCAGGGGCAGCGTGGGCGCGTTCTCGGCGATGGAGTTGCTGAGGAGCACCGGCTGCTACGTTCCGCTGCCGCAGATGGCGCCGCTAGGGATGCCGGCGGAGTACGCAGCCGCGGGGTTCCATCTCGGCGAGTTCCGCATGCCACCGCCGCCACAGCAGCAGCAGCAACAACAAGCTCAGACCGTGCTCGGTTTCTCCCTGGACACGCACGGCGCGGGTGCAGGCGGCGGCTCCGGGGTGTTCGGCGCGTGCAGCGCTGGGTTGCAAGAGAGCGCGGCGGGCAGGTTGCTGTTCCCCTTCGAGGACCTGAAGCCGGTGGTGAGCGCCGCGGCTGGCGACGCGAACAGCGGCGGCGATCATCAGTACGACCACGGCAAGAACCAAGGTGGTGGCGGCGGCGTCATCGGTGGCCATGAGGCCCCAGGGTTCTGGAATAGCAGCATGATCGGCAACGGCAGCAGCAATGGCGGCGGCGGCGGCGGTTCTTGG

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Protein seq

MDAAHWHQGLGLVKPMEEMLMGANPNPNGSSNQPPPPPSSAASAQRPIAPPAAGAAAGAGAAGAGAGTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSSVVPSAAASASTSAAVSGSVPVGLAAKNPKLMHEGAQDLNLAFPHHHGRALQPSEFTAFPSLESSSVCNPGGNLAAANGAGGRGSVGAFSAMELLRSTGCYVPLPQMAPLGMPAEYAAAGFHLGEFRMPPPPQQQQQQQAQTVLGFSLDTHGAGAGGGSGVFGACSAGLQESAAGRLLFPFEDLKPVVSAAAGDANSGGDHQYDHGKNQGGGGGVIGGHEAPGFWNSSMIGNGSSNGGGGGGSW

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Gene Transcript Chromosome Start End Strand Source
OsN22_02G028650 OsN22_02G028650_02 Chr02 28818377 28820329 - NAM
CDS seq

ATGGAAGAGATGCTGATGGGTGCAAATCCAAATCCTAATGGGAGCTCAAATCAGCCACCGCCACCGCCGTCCTCGGCGGCCAGCGCCCAGCGGCCTATCGCCCCACCGGCGGCTGGAGCGGCCGCCGGCGCGGGCGCCGCCGGAGCTGGGGCTGGCACGGAGCGCCGCGCGCGGCCGCAGAAGGAGAAGGCGCTCAACTGCCCGCGGTGCAACTCGACGAACACCAAGTTCTGCTACTACAACAACTACAGCCTCCAGCAGCCGCGCTACTTCTGCAAGACGTGCCGCCGCTACTGGACGGAGGGCGGCTCGCTCCGCAACGTCCCCGTCGGCGGCGGCTCACGGAAGAACAAGCGCTCGTCGTCCTCGGTGGTGCCGTCAGCGGCCGCGTCGGCCTCCACCTCCGCGGCGGTGTCCGGCTCGGTCCCCGTGGGGCTGGCGGCCAAGAACCCGAAGCTGATGCACGAGGGCGCGCAGGACCTCAACCTGGCGTTCCCGCACCACCACGGCCGCGCCCTGCAGCCTTCGGAGTTCACGGCGTTCCCGAGCTTGGAGAGCAGCAGCGTGTGCAACCCCGGAGGCAACCTGGCGGCGGCGAACGGCGCCGGTGGCAGGGGCAGCGTGGGCGCGTTCTCGGCGATGGAGTTGCTGAGGAGCACCGGCTGCTACGTTCCGCTGCCGCAGATGGCGCCGCTAGGGATGCCGGCGGAGTACGCAGCCGCGGGGTTCCATCTCGGCGAGTTCCGCATGCCACCGCCGCCACAGCAGCAGCAGCAACAACAAGCTCAGACCGTGCTCGGTTTCTCCCTGGACACGCACGGCGCGGGTGCAGGCGGCGGCTCCGGGGTGTTCGGCGCGTGCAGCGCTGGGTTGCAAGAGAGCGCGGCGGGCAGGTTGCTGTTCCCCTTCGAGGACCTGAAGCCGGTGGTGAGCGCCGCGGCTGGCGACGCGAACAGCGGCGGCGATCATCAGTACGACCACGGCAAGAACCAAGGTGGTGGCGGCGGCGTCATCGGTGGCCATGAGGCCCCAGGGTTCTGGAATAGCAGCATGATCGGCAACGGCAGCAGCAATGGCGGCGGCGGCGGCGGTTCTTGG

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Protein seq

MEEMLMGANPNPNGSSNQPPPPPSSAASAQRPIAPPAAGAAAGAGAAGAGAGTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSSVVPSAAASASTSAAVSGSVPVGLAAKNPKLMHEGAQDLNLAFPHHHGRALQPSEFTAFPSLESSSVCNPGGNLAAANGAGGRGSVGAFSAMELLRSTGCYVPLPQMAPLGMPAEYAAAGFHLGEFRMPPPPQQQQQQQAQTVLGFSLDTHGAGAGGGSGVFGACSAGLQESAAGRLLFPFEDLKPVVSAAAGDANSGGDHQYDHGKNQGGGGGVIGGHEAPGFWNSSMIGNGSSNGGGGGGSW

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OsN22_02G028650_02OsN22_02G028650_01AS28818500 bp28819000 bp28819500 bp28820000 bp28820500 bp28821000 bp28821500 bpAll AS eventsIsoSeq based ASRoot based ASLeaf based ASPanicle based AS
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
AF Chr02 28819901 28821249 - OsN22_02G028650_02 OsN22_02G028650_01,OsN22_02G028650_02 All

Expression

Leaf Root Panicle
FPKM 0.0 0.724289 0.858362

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_02g0673700 RBH 0.202685 0.554396 1.369402
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g45200 RBH 0.150435 0.230157 0.279921
Nipponbare | IRGSP 1.0 | RAP-db Os02g0673700 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0028700 RBH 0.072627 5.606575 0.375493
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0028780 RBH 0.000000 1.083767 1.940428
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0028640 RBH 0.228883 3.180778 2.815284
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0028250 RBH 0.0 0.138736 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0028370 RBH 0.0 5.562286 2.513437
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0444900 RBH 2.239528 34.2536585 5.70636
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_02g0028180 RBH 0.052675 0.536796 0.199880
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0473500 RBH 3.048302 43.033453 13.080287
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0028510 RBH 0.051512 0.296076 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_02g0028220 RBH 0.000000 12.390618 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0028520 RBH 0.0 27.119858 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_02g0028390 RBH 0.124713 0.970425 1.046731
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0028080 RBH 0.0 1.282870 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_04G022780 RBH 0.034723 1.577091 0.718679
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0028430 RBH 1.465440 66.571632 0.733456
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Huazhong Agricultural University

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